HEADER PROTEIN BINDING 06-FEB-14 4OYU TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL DOMAINS OF MUSKELIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MUSKELIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 12-205; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: MKLN1, MSK; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS DISCOIDIN DOMAIN, LISH MOTIF, DIMER, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.DELTO,J.KUPER,H.SCHINDELIN REVDAT 5 27-DEC-23 4OYU 1 SOURCE REMARK REVDAT 4 25-MAR-15 4OYU 1 REMARK LINK SITE HETATM REVDAT 3 25-FEB-15 4OYU 1 REMARK REVDAT 2 18-FEB-15 4OYU 1 JRNL SHEET REVDAT 1 11-FEB-15 4OYU 0 JRNL AUTH C.F.DELTO,F.F.HEISLER,J.KUPER,B.SANDER,M.KNEUSSEL, JRNL AUTH 2 H.SCHINDELIN JRNL TITL THE LISH MOTIF OF MUSKELIN IS CRUCIAL FOR OLIGOMERIZATION JRNL TITL 2 AND GOVERNS INTRACELLULAR LOCALIZATION. JRNL REF STRUCTURE V. 23 364 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 25579817 JRNL DOI 10.1016/J.STR.2014.11.016 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.80 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.860 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 39448 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.158 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1979 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.8102 - 5.3960 0.99 2614 128 0.1935 0.2079 REMARK 3 2 5.3960 - 4.2857 1.00 2647 132 0.1390 0.1168 REMARK 3 3 4.2857 - 3.7448 1.00 2625 131 0.1312 0.1962 REMARK 3 4 3.7448 - 3.4027 1.00 2632 143 0.1368 0.1795 REMARK 3 5 3.4027 - 3.1590 1.00 2623 149 0.1524 0.1963 REMARK 3 6 3.1590 - 2.9729 1.00 2638 144 0.1544 0.2011 REMARK 3 7 2.9729 - 2.8241 1.00 2591 170 0.1652 0.1851 REMARK 3 8 2.8241 - 2.7012 1.00 2639 150 0.1550 0.2263 REMARK 3 9 2.7012 - 2.5973 1.00 2659 94 0.1562 0.2084 REMARK 3 10 2.5973 - 2.5077 1.00 2664 129 0.1622 0.2192 REMARK 3 11 2.5077 - 2.4293 1.00 2595 149 0.1542 0.2047 REMARK 3 12 2.4293 - 2.3599 1.00 2636 145 0.1575 0.2212 REMARK 3 13 2.3599 - 2.2977 1.00 2643 129 0.1531 0.1917 REMARK 3 14 2.2977 - 2.2417 1.00 2617 144 0.1608 0.2038 REMARK 3 15 2.2417 - 2.1907 1.00 2617 157 0.1471 0.2251 REMARK 3 16 2.1907 - 2.1441 1.00 2681 125 0.1417 0.1776 REMARK 3 17 2.1441 - 2.1012 1.00 2579 145 0.1498 0.1764 REMARK 3 18 2.1012 - 2.0616 1.00 2607 165 0.1461 0.2056 REMARK 3 19 2.0616 - 2.0248 1.00 2605 151 0.1553 0.1896 REMARK 3 20 2.0248 - 1.9905 1.00 2681 138 0.1647 0.2175 REMARK 3 21 1.9905 - 1.9584 1.00 2640 146 0.1859 0.2390 REMARK 3 22 1.9584 - 1.9282 1.00 2616 130 0.1779 0.2323 REMARK 3 23 1.9282 - 1.8999 1.00 2656 113 0.1846 0.2324 REMARK 3 24 1.8999 - 1.8731 1.00 2649 150 0.1903 0.2290 REMARK 3 25 1.8731 - 1.8478 1.00 2605 137 0.2061 0.2271 REMARK 3 26 1.8478 - 1.8238 1.00 2658 108 0.2098 0.2169 REMARK 3 27 1.8238 - 1.8010 1.00 2651 151 0.2221 0.2766 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.490 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.82 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 41.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 3192 REMARK 3 ANGLE : 1.422 4280 REMARK 3 CHIRALITY : 0.084 439 REMARK 3 PLANARITY : 0.007 539 REMARK 3 DIHEDRAL : 15.231 1215 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 11 THROUGH 23 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6201 12.1716 8.9687 REMARK 3 T TENSOR REMARK 3 T11: 0.3387 T22: 0.3084 REMARK 3 T33: 0.2680 T12: -0.1213 REMARK 3 T13: -0.0147 T23: 0.0183 REMARK 3 L TENSOR REMARK 3 L11: 7.0780 L22: 3.4999 REMARK 3 L33: 2.6159 L12: 3.4465 REMARK 3 L13: 3.9314 L23: 2.0600 REMARK 3 S TENSOR REMARK 3 S11: -0.2896 S12: 0.5369 S13: 0.1642 REMARK 3 S21: -0.2625 S22: 0.0276 S23: 0.6052 REMARK 3 S31: 0.1973 S32: -0.0648 S33: 0.6049 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 73 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4232 17.9114 13.2350 REMARK 3 T TENSOR REMARK 3 T11: 0.2661 T22: 0.2933 REMARK 3 T33: 0.1993 T12: -0.1366 REMARK 3 T13: -0.0081 T23: 0.0190 REMARK 3 L TENSOR REMARK 3 L11: 2.6149 L22: 3.2868 REMARK 3 L33: 2.0297 L12: 0.1881 REMARK 3 L13: 0.4651 L23: 0.3067 REMARK 3 S TENSOR REMARK 3 S11: -0.3197 S12: 0.4118 S13: 0.0416 REMARK 3 S21: -0.3520 S22: 0.2944 S23: -0.1116 REMARK 3 S31: -0.2984 S32: 0.3317 S33: -0.0035 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 74 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.5471 13.1618 6.8449 REMARK 3 T TENSOR REMARK 3 T11: 0.4335 T22: 0.8319 REMARK 3 T33: 0.9149 T12: -0.1848 REMARK 3 T13: 0.1609 T23: -0.1442 REMARK 3 L TENSOR REMARK 3 L11: 3.3679 L22: 6.1384 REMARK 3 L33: 3.9103 L12: -1.8431 REMARK 3 L13: 3.4820 L23: -2.6259 REMARK 3 S TENSOR REMARK 3 S11: -0.3525 S12: 1.0256 S13: 0.7811 REMARK 3 S21: -0.6580 S22: -0.1173 S23: -2.0871 REMARK 3 S31: -0.2703 S32: 1.3788 S33: 0.4641 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 87 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8676 7.0853 14.5740 REMARK 3 T TENSOR REMARK 3 T11: 0.2019 T22: 0.2211 REMARK 3 T33: 0.2612 T12: -0.0442 REMARK 3 T13: -0.0086 T23: -0.0312 REMARK 3 L TENSOR REMARK 3 L11: 4.7368 L22: 4.4684 REMARK 3 L33: 2.8691 L12: 1.9285 REMARK 3 L13: 0.4642 L23: 0.2882 REMARK 3 S TENSOR REMARK 3 S11: -0.1004 S12: 0.2576 S13: -0.5641 REMARK 3 S21: -0.1222 S22: 0.1979 S23: -0.3877 REMARK 3 S31: 0.2153 S32: 0.3838 S33: 0.0202 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 158 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.6540 1.1803 28.6608 REMARK 3 T TENSOR REMARK 3 T11: 0.2842 T22: 0.3055 REMARK 3 T33: 0.4078 T12: -0.0144 REMARK 3 T13: -0.0288 T23: -0.0561 REMARK 3 L TENSOR REMARK 3 L11: 2.8382 L22: 3.0160 REMARK 3 L33: 4.4462 L12: -1.1933 REMARK 3 L13: 0.2107 L23: -3.2804 REMARK 3 S TENSOR REMARK 3 S11: -0.3309 S12: -0.2007 S13: 0.3156 REMARK 3 S21: 0.3320 S22: 0.2009 S23: -0.1758 REMARK 3 S31: -0.3712 S32: 0.7496 S33: 0.1835 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 10 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.6425 21.4018 65.8279 REMARK 3 T TENSOR REMARK 3 T11: 0.2548 T22: 0.1982 REMARK 3 T33: 0.1343 T12: -0.0994 REMARK 3 T13: -0.0212 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 3.6843 L22: 2.0841 REMARK 3 L33: 3.8317 L12: -0.6604 REMARK 3 L13: -0.1437 L23: 0.3151 REMARK 3 S TENSOR REMARK 3 S11: 0.0939 S12: -0.2146 S13: -0.2395 REMARK 3 S21: 0.3616 S22: -0.1707 S23: -0.1881 REMARK 3 S31: -0.2071 S32: 0.1858 S33: -0.0277 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 42 THROUGH 86 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.3960 27.5138 63.7173 REMARK 3 T TENSOR REMARK 3 T11: 0.4493 T22: 0.2175 REMARK 3 T33: 0.2554 T12: -0.0977 REMARK 3 T13: 0.0555 T23: -0.0513 REMARK 3 L TENSOR REMARK 3 L11: 4.6302 L22: 0.5886 REMARK 3 L33: 3.3029 L12: 0.5686 REMARK 3 L13: -0.5142 L23: -1.1335 REMARK 3 S TENSOR REMARK 3 S11: 0.3611 S12: -0.1851 S13: 0.5221 REMARK 3 S21: 0.4972 S22: -0.3004 S23: 0.2125 REMARK 3 S31: -0.8420 S32: 0.0329 S33: 0.0386 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 87 THROUGH 157 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3414 21.9104 61.4380 REMARK 3 T TENSOR REMARK 3 T11: 0.1570 T22: 0.2208 REMARK 3 T33: 0.2088 T12: -0.0242 REMARK 3 T13: 0.0404 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 4.7951 L22: 4.7060 REMARK 3 L33: 4.5180 L12: 1.4050 REMARK 3 L13: -0.4417 L23: -0.7172 REMARK 3 S TENSOR REMARK 3 S11: 0.2136 S12: 0.0217 S13: 0.3084 REMARK 3 S21: 0.2090 S22: -0.1252 S23: 0.5168 REMARK 3 S31: -0.2770 S32: -0.4257 S33: -0.0010 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 158 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.7684 5.0287 47.3375 REMARK 3 T TENSOR REMARK 3 T11: 0.2835 T22: 0.2826 REMARK 3 T33: 0.3527 T12: -0.0384 REMARK 3 T13: 0.0714 T23: -0.0378 REMARK 3 L TENSOR REMARK 3 L11: 2.3293 L22: 3.1852 REMARK 3 L33: 4.0845 L12: -0.8729 REMARK 3 L13: 2.6512 L23: -0.1569 REMARK 3 S TENSOR REMARK 3 S11: 0.0818 S12: 0.1769 S13: -0.0400 REMARK 3 S21: -0.2327 S22: -0.2148 S23: -0.2563 REMARK 3 S31: -0.4995 S32: 0.0502 S33: 0.1943 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OYU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000200207. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.25-6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.95 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39509 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 33.800 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BISTRIS PH 5.5, 200 MM SODIUM REMARK 280 CHLORIDE AND 32.5% (W/V) PEG 3350, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 31.53000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.69500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.65000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.69500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 31.53000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.65000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3610 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 28.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 10 REMARK 465 TYR A 189 REMARK 465 THR A 190 REMARK 465 GLU A 191 REMARK 465 ALA A 192 REMARK 465 PHE A 193 REMARK 465 GLU A 194 REMARK 465 SER A 195 REMARK 465 LEU A 196 REMARK 465 GLN A 197 REMARK 465 LYS A 198 REMARK 465 LYS A 199 REMARK 465 THR A 200 REMARK 465 LYS A 201 REMARK 465 ILE A 202 REMARK 465 ALA A 203 REMARK 465 LEU A 204 REMARK 465 GLU A 205 REMARK 465 TYR B 189 REMARK 465 THR B 190 REMARK 465 GLU B 191 REMARK 465 ALA B 192 REMARK 465 PHE B 193 REMARK 465 GLU B 194 REMARK 465 SER B 195 REMARK 465 LEU B 196 REMARK 465 GLN B 197 REMARK 465 LYS B 198 REMARK 465 LYS B 199 REMARK 465 THR B 200 REMARK 465 LYS B 201 REMARK 465 ILE B 202 REMARK 465 ALA B 203 REMARK 465 LEU B 204 REMARK 465 GLU B 205 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 404 O HOH A 409 1.92 REMARK 500 OE1 GLU B 50 O HOH B 401 1.97 REMARK 500 O HOH A 452 O HOH A 456 1.98 REMARK 500 O HOH B 500 O HOH B 507 2.13 REMARK 500 OE1 GLU A 12 O HOH A 401 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 435 O HOH B 407 2454 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS B 13 CB CYS B 13 SG -0.120 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 28 -124.07 49.18 REMARK 500 SER A 28 -124.40 49.88 REMARK 500 SER A 104 -150.14 -157.41 REMARK 500 HIS A 119 15.23 -145.34 REMARK 500 ASP A 122 -124.59 58.07 REMARK 500 HIS A 187 38.99 -84.10 REMARK 500 SER B 28 -110.76 41.90 REMARK 500 SER B 104 -149.06 -155.33 REMARK 500 HIS B 119 14.56 -145.87 REMARK 500 ASP B 122 -123.54 59.78 REMARK 500 HIS B 187 42.42 -83.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: AE6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO B 310 DBREF 4OYU A 12 205 UNP Q99PV3 MKLN1_RAT 12 205 DBREF 4OYU B 12 205 UNP Q99PV3 MKLN1_RAT 12 205 SEQADV 4OYU ALA A 10 UNP Q99PV3 EXPRESSION TAG SEQADV 4OYU MET A 11 UNP Q99PV3 EXPRESSION TAG SEQADV 4OYU ALA B 10 UNP Q99PV3 EXPRESSION TAG SEQADV 4OYU MET B 11 UNP Q99PV3 EXPRESSION TAG SEQRES 1 A 196 ALA MET GLU CYS ARG LEU LEU PRO TYR ALA LEU HIS LYS SEQRES 2 A 196 TRP SER SER PHE SER SER THR TYR LEU PRO GLU ASN ILE SEQRES 3 A 196 LEU VAL ASP LYS PRO ASN ASP GLN SER SER ARG TRP SER SEQRES 4 A 196 SER GLU SER ASN TYR PRO PRO GLN TYR LEU ILE LEU LYS SEQRES 5 A 196 LEU GLU ARG PRO ALA ILE VAL GLN ASN ILE THR PHE GLY SEQRES 6 A 196 LYS TYR GLU LYS THR HIS VAL CYS ASN LEU LYS LYS PHE SEQRES 7 A 196 LYS VAL PHE GLY GLY MET ASN GLU GLU ASN MET THR GLU SEQRES 8 A 196 LEU LEU SER SER GLY LEU LYS ASN ASP TYR ASN LYS GLU SEQRES 9 A 196 THR PHE THR LEU LYS HIS LYS ILE ASP GLU GLN MET PHE SEQRES 10 A 196 PRO CYS ARG PHE ILE LYS ILE VAL PRO LEU LEU SER TRP SEQRES 11 A 196 GLY PRO SER PHE ASN PHE SER ILE TRP TYR VAL GLU LEU SEQRES 12 A 196 SER GLY ILE ASP ASP PRO ASP ILE VAL GLN PRO CYS LEU SEQRES 13 A 196 ASN TRP TYR SER LYS TYR ARG GLU GLN GLU ALA ILE ARG SEQRES 14 A 196 LEU CYS LEU LYS HIS PHE ARG GLN HIS ASN TYR THR GLU SEQRES 15 A 196 ALA PHE GLU SER LEU GLN LYS LYS THR LYS ILE ALA LEU SEQRES 16 A 196 GLU SEQRES 1 B 196 ALA MET GLU CYS ARG LEU LEU PRO TYR ALA LEU HIS LYS SEQRES 2 B 196 TRP SER SER PHE SER SER THR TYR LEU PRO GLU ASN ILE SEQRES 3 B 196 LEU VAL ASP LYS PRO ASN ASP GLN SER SER ARG TRP SER SEQRES 4 B 196 SER GLU SER ASN TYR PRO PRO GLN TYR LEU ILE LEU LYS SEQRES 5 B 196 LEU GLU ARG PRO ALA ILE VAL GLN ASN ILE THR PHE GLY SEQRES 6 B 196 LYS TYR GLU LYS THR HIS VAL CYS ASN LEU LYS LYS PHE SEQRES 7 B 196 LYS VAL PHE GLY GLY MET ASN GLU GLU ASN MET THR GLU SEQRES 8 B 196 LEU LEU SER SER GLY LEU LYS ASN ASP TYR ASN LYS GLU SEQRES 9 B 196 THR PHE THR LEU LYS HIS LYS ILE ASP GLU GLN MET PHE SEQRES 10 B 196 PRO CYS ARG PHE ILE LYS ILE VAL PRO LEU LEU SER TRP SEQRES 11 B 196 GLY PRO SER PHE ASN PHE SER ILE TRP TYR VAL GLU LEU SEQRES 12 B 196 SER GLY ILE ASP ASP PRO ASP ILE VAL GLN PRO CYS LEU SEQRES 13 B 196 ASN TRP TYR SER LYS TYR ARG GLU GLN GLU ALA ILE ARG SEQRES 14 B 196 LEU CYS LEU LYS HIS PHE ARG GLN HIS ASN TYR THR GLU SEQRES 15 B 196 ALA PHE GLU SER LEU GLN LYS LYS THR LYS ILE ALA LEU SEQRES 16 B 196 GLU HET EDO A 301 10 HET EDO A 302 10 HET EDO A 303 10 HET EDO A 304 10 HET EDO A 305 10 HET EDO A 306 10 HET EDO A 307 10 HET EDO A 308 10 HET EDO A 309 10 HET EDO A 310 10 HET GOL A 311 14 HET EDO A 312 10 HET EDO A 313 10 HET EDO A 314 10 HET EDO B 301 10 HET EDO B 302 10 HET EDO B 303 10 HET EDO B 304 10 HET EDO B 305 10 HET EDO B 306 10 HET EDO B 307 10 HET EDO B 308 10 HET EDO B 309 10 HET EDO B 310 10 HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 EDO 23(C2 H6 O2) FORMUL 13 GOL C3 H8 O3 FORMUL 27 HOH *270(H2 O) HELIX 1 AA1 LEU A 31 VAL A 37 5 7 HELIX 2 AA2 ASP A 157 HIS A 187 1 31 HELIX 3 AA3 LEU B 31 VAL B 37 5 7 HELIX 4 AA4 ASP B 157 HIS B 187 1 31 SHEET 1 AA1 6 ARG A 14 LEU A 15 0 SHEET 2 AA1 6 TYR A 149 ILE A 155 -1 O GLY A 154 N ARG A 14 SHEET 3 AA1 6 LEU A 58 GLY A 74 -1 N ILE A 67 O ILE A 155 SHEET 4 AA1 6 CYS A 128 SER A 138 -1 O ILE A 131 N LEU A 60 SHEET 5 AA1 6 LEU A 84 GLY A 92 -1 N LYS A 88 O VAL A 134 SHEET 6 AA1 6 THR A 99 SER A 104 -1 O LEU A 101 N VAL A 89 SHEET 1 AA2 3 TYR A 18 TRP A 23 0 SHEET 2 AA2 3 LEU A 58 GLY A 74 -1 O ILE A 59 N HIS A 21 SHEET 3 AA2 3 GLU A 113 THR A 116 -1 O PHE A 115 N ILE A 71 SHEET 1 AA3 2 TRP A 47 SER A 48 0 SHEET 2 AA3 2 SER A 146 ILE A 147 -1 O ILE A 147 N TRP A 47 SHEET 1 AA4 2 LYS A 120 ILE A 121 0 SHEET 2 AA4 2 GLN A 124 MET A 125 -1 O GLN A 124 N ILE A 121 SHEET 1 AA5 6 ARG B 14 LEU B 15 0 SHEET 2 AA5 6 TYR B 149 ILE B 155 -1 O GLY B 154 N ARG B 14 SHEET 3 AA5 6 LEU B 58 GLY B 74 -1 N ILE B 67 O ILE B 155 SHEET 4 AA5 6 CYS B 128 SER B 138 -1 O ILE B 131 N LEU B 60 SHEET 5 AA5 6 LEU B 84 GLY B 92 -1 N LYS B 88 O VAL B 134 SHEET 6 AA5 6 THR B 99 SER B 104 -1 O LEU B 101 N VAL B 89 SHEET 1 AA6 3 TYR B 18 TRP B 23 0 SHEET 2 AA6 3 LEU B 58 GLY B 74 -1 O LYS B 61 N ALA B 19 SHEET 3 AA6 3 GLU B 113 THR B 116 -1 O PHE B 115 N ILE B 71 SHEET 1 AA7 2 TRP B 47 SER B 48 0 SHEET 2 AA7 2 SER B 146 ILE B 147 -1 O ILE B 147 N TRP B 47 SHEET 1 AA8 2 LYS B 120 ILE B 121 0 SHEET 2 AA8 2 GLN B 124 MET B 125 -1 O GLN B 124 N ILE B 121 CISPEP 1 PRO A 54 PRO A 55 0 2.03 CISPEP 2 PRO B 54 PRO B 55 0 2.35 CISPEP 3 TRP B 139 GLY B 140 0 21.14 SITE 1 AC1 6 LEU A 15 PRO A 17 TYR A 18 LEU A 36 SITE 2 AC1 6 VAL A 150 HOH A 466 SITE 1 AC2 4 TRP A 23 GLU A 175 HOH A 405 HOH A 410 SITE 1 AC3 5 GLN A 124 PRO A 163 TRP A 167 MET B 11 SITE 2 AC3 5 ILE B 155 SITE 1 AC4 3 MET A 98 LYS A 132 HOH A 541 SITE 1 AC5 6 ILE A 59 GLU A 95 LYS A 132 EDO A 313 SITE 2 AC5 6 HOH A 456 HOH A 529 SITE 1 AC6 1 LYS B 112 SITE 1 AC7 6 SER A 25 GLU A 50 SER A 51 GLN A 56 SITE 2 AC7 6 HOH A 478 CYS B 13 SITE 1 AC8 5 GLU A 173 ILE A 177 HOH A 415 HOH A 416 SITE 2 AC8 5 THR B 29 SITE 1 AC9 2 GLU A 113 THR A 114 SITE 1 AD1 5 TYR A 53 THR B 114 GLU B 151 HOH B 409 SITE 2 AD1 5 HOH B 410 SITE 1 AD2 2 HIS A 21 GLU A 175 SITE 1 AD3 6 SER A 27 GLU A 50 ASN A 144 HOH A 420 SITE 2 AD3 6 GLU B 12 GLN B 43 SITE 1 AD4 7 PRO A 55 GLN A 56 TYR A 57 LYS A 132 SITE 2 AD4 7 VAL A 134 EDO A 305 HOH A 541 SITE 1 AD5 5 MET A 11 GLU A 12 TRP B 167 TYR B 171 SITE 2 AD5 5 GLN B 174 SITE 1 AD6 4 LYS B 88 GLU B 100 SER B 103 HOH B 451 SITE 1 AD7 5 TRP B 23 GLN B 174 GLU B 175 HOH B 412 SITE 2 AD7 5 HOH B 435 SITE 1 AD8 7 PHE B 90 GLU B 95 GLU B 96 ASN B 97 SITE 2 AD8 7 MET B 98 LYS B 132 EDO B 304 SITE 1 AD9 7 ILE B 59 GLU B 95 MET B 98 LYS B 132 SITE 2 AD9 7 EDO B 303 EDO B 305 HOH B 450 SITE 1 AE1 3 LYS B 132 EDO B 304 HOH B 452 SITE 1 AE2 6 GLY B 92 MET B 93 ASN B 94 GLU B 96 SITE 2 AE2 6 ASN B 97 HOH B 454 SITE 1 AE3 5 PRO B 65 ASP B 156 PRO B 158 VAL B 161 SITE 2 AE3 5 GLN B 162 SITE 1 AE4 3 ASP B 159 GLN B 162 PRO B 163 SITE 1 AE5 7 LEU B 15 TYR B 18 LEU B 36 TYR B 149 SITE 2 AE5 7 VAL B 150 HOH B 463 HOH B 524 SITE 1 AE6 4 GLU B 113 THR B 114 PHE B 115 HOH B 525 CRYST1 63.060 65.300 101.390 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015858 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015314 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009863 0.00000