HEADER TRANSCRIPTION 18-FEB-14 4OZR TITLE CRYSTAL STRUCTURE OF THE LIGAND BINDING DOMAINS OF THE BOVICOLA OVIS TITLE 2 ECDYSONE RECEPTOR ECR/USP HETERODIMER (METHYLENE LACTAM CRYSTAL) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ECDYSONE RECEPTOR; COMPND 3 CHAIN: E; COMPND 4 FRAGMENT: UNP RESIDUES 281-514; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: RETINOID X RECEPTOR; COMPND 8 CHAIN: U; COMPND 9 FRAGMENT: UNP RESIDUES 222-415; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PEDICULUS HUMANUS SUBSP. CORPORIS; SOURCE 3 ORGANISM_COMMON: BODY LOUSE; SOURCE 4 ORGANISM_TAXID: 121224; SOURCE 5 GENE: PHUM_PHUM467460; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 MOL_ID: 2; SOURCE 9 ORGANISM_SCIENTIFIC: PEDICULUS HUMANUS SUBSP. CORPORIS; SOURCE 10 ORGANISM_COMMON: BODY LOUSE; SOURCE 11 ORGANISM_TAXID: 121224; SOURCE 12 GENE: PHUM_PHUM164330; SOURCE 13 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 14 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS ECDYSONE RECEPTOR, USP, METHYLENE LACTAM, HETERODIMER, LIGAND BINDING KEYWDS 2 DOMAIN, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR B.REN,T.S.PEAT,V.A.STRELTSOV,M.POLLARD,R.FERNLEY,J.GRUSOVIN, AUTHOR 2 S.SEABROOK,P.PILLING,T.PHAN,L.LU,G.O.LOVRECZ,L.D.GRAHAM,R.J.HILL REVDAT 2 27-DEC-23 4OZR 1 SOURCE REMARK REVDAT 1 30-JUL-14 4OZR 0 JRNL AUTH B.REN,T.S.PEAT,V.A.STRELTSOV,M.POLLARD,R.FERNLEY,J.GRUSOVIN, JRNL AUTH 2 S.SEABROOK,P.PILLING,T.PHAN,L.LU,G.O.LOVRECZ,L.D.GRAHAM, JRNL AUTH 3 R.J.HILL JRNL TITL UNPRECEDENTED CONFORMATIONAL FLEXIBILITY REVEALED IN THE JRNL TITL 2 LIGAND-BINDING DOMAINS OF THE BOVICOLA OVIS ECDYSONE JRNL TITL 3 RECEPTOR (ECR) AND ULTRASPIRACLE (USP) SUBUNITS. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 1954 2014 JRNL REFN ESSN 1399-0047 JRNL PMID 25004972 JRNL DOI 10.1107/S1399004714009626 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 68.03 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 3 NUMBER OF REFLECTIONS : 13290 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.224 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 68.0519 - 4.6166 0.92 2510 145 0.2350 0.2471 REMARK 3 2 4.6166 - 3.6644 0.95 2528 120 0.1869 0.2117 REMARK 3 3 3.6644 - 3.2012 0.96 2506 143 0.2247 0.2667 REMARK 3 4 3.2012 - 2.9085 0.97 2544 132 0.2524 0.3279 REMARK 3 5 2.9085 - 2.7001 0.97 2524 138 0.2631 0.3346 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3179 REMARK 3 ANGLE : 1.134 4304 REMARK 3 CHIRALITY : 0.076 504 REMARK 3 PLANARITY : 0.006 549 REMARK 3 DIHEDRAL : 15.970 1199 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 282 THROUGH 301 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.9787 -10.0851 4.9693 REMARK 3 T TENSOR REMARK 3 T11: 0.4470 T22: 0.3775 REMARK 3 T33: 0.2943 T12: 0.0024 REMARK 3 T13: 0.1627 T23: 0.0293 REMARK 3 L TENSOR REMARK 3 L11: 6.7659 L22: 5.9923 REMARK 3 L33: 6.2705 L12: -0.3724 REMARK 3 L13: 2.7287 L23: 0.9432 REMARK 3 S TENSOR REMARK 3 S11: 0.3574 S12: 0.8187 S13: -0.2194 REMARK 3 S21: -0.8938 S22: -0.3718 S23: -0.4996 REMARK 3 S31: 0.8164 S32: 0.5518 S33: 0.3356 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 302 THROUGH 328 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.0570 6.7952 1.2168 REMARK 3 T TENSOR REMARK 3 T11: 1.0933 T22: 1.2627 REMARK 3 T33: 0.9540 T12: 0.1095 REMARK 3 T13: -0.0852 T23: 0.2728 REMARK 3 L TENSOR REMARK 3 L11: 0.4023 L22: 6.5244 REMARK 3 L33: 7.1250 L12: -0.6216 REMARK 3 L13: -1.7536 L23: 4.3693 REMARK 3 S TENSOR REMARK 3 S11: -0.1378 S12: 1.5095 S13: 1.2337 REMARK 3 S21: -1.5448 S22: -0.3643 S23: 0.6650 REMARK 3 S31: -2.2963 S32: -1.1512 S33: 1.1102 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 329 THROUGH 334 ) REMARK 3 ORIGIN FOR THE GROUP (A): -22.0504 12.8570 9.8806 REMARK 3 T TENSOR REMARK 3 T11: 0.9503 T22: 0.7846 REMARK 3 T33: 0.9969 T12: 0.0513 REMARK 3 T13: -0.3332 T23: 0.0943 REMARK 3 L TENSOR REMARK 3 L11: 6.0180 L22: 8.7073 REMARK 3 L33: 6.1064 L12: 0.0844 REMARK 3 L13: 2.3542 L23: -2.6131 REMARK 3 S TENSOR REMARK 3 S11: -0.7884 S12: -0.2465 S13: 1.3866 REMARK 3 S21: -0.6010 S22: -0.6276 S23: 0.7353 REMARK 3 S31: -0.5609 S32: -0.2527 S33: 1.4044 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 335 THROUGH 409 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.0754 0.8802 13.0259 REMARK 3 T TENSOR REMARK 3 T11: 0.2369 T22: 0.5009 REMARK 3 T33: 0.3102 T12: 0.0423 REMARK 3 T13: 0.0069 T23: 0.0426 REMARK 3 L TENSOR REMARK 3 L11: 5.2012 L22: 5.6507 REMARK 3 L33: 6.6859 L12: -1.4580 REMARK 3 L13: 0.5649 L23: -0.6130 REMARK 3 S TENSOR REMARK 3 S11: 0.1519 S12: 0.5364 S13: 0.7707 REMARK 3 S21: 0.0237 S22: -0.2025 S23: 0.0171 REMARK 3 S31: -0.4819 S32: -0.5105 S33: 0.0459 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 410 THROUGH 467 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9459 -3.6260 17.3538 REMARK 3 T TENSOR REMARK 3 T11: 0.2879 T22: 0.3470 REMARK 3 T33: 0.1645 T12: 0.0154 REMARK 3 T13: -0.0188 T23: 0.0574 REMARK 3 L TENSOR REMARK 3 L11: 5.6565 L22: 4.6380 REMARK 3 L33: 5.3476 L12: -0.2365 REMARK 3 L13: -0.0528 L23: 0.8395 REMARK 3 S TENSOR REMARK 3 S11: 0.0250 S12: 0.1731 S13: 0.2931 REMARK 3 S21: 0.1600 S22: 0.2252 S23: -0.1988 REMARK 3 S31: -0.2936 S32: 0.1651 S33: -0.0920 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 468 THROUGH 475 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.9427 -3.1975 14.9111 REMARK 3 T TENSOR REMARK 3 T11: 0.8914 T22: 0.6836 REMARK 3 T33: 0.7432 T12: -0.1374 REMARK 3 T13: -0.2932 T23: -0.0587 REMARK 3 L TENSOR REMARK 3 L11: 3.0970 L22: 1.4610 REMARK 3 L33: 1.2671 L12: 0.2234 REMARK 3 L13: -0.8372 L23: 1.1729 REMARK 3 S TENSOR REMARK 3 S11: -0.6373 S12: 1.0326 S13: -1.1128 REMARK 3 S21: 0.2499 S22: 0.6779 S23: -0.1359 REMARK 3 S31: 0.9821 S32: 0.8521 S33: -0.4910 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 476 THROUGH 509 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.2131 6.7269 23.4812 REMARK 3 T TENSOR REMARK 3 T11: 0.4288 T22: 0.5076 REMARK 3 T33: 0.3155 T12: 0.1066 REMARK 3 T13: 0.0338 T23: 0.1316 REMARK 3 L TENSOR REMARK 3 L11: 4.0992 L22: 1.4771 REMARK 3 L33: 1.5346 L12: -1.5983 REMARK 3 L13: 0.8490 L23: 0.5082 REMARK 3 S TENSOR REMARK 3 S11: 0.1078 S12: 0.5196 S13: 0.5906 REMARK 3 S21: 0.1560 S22: -0.0803 S23: -0.1430 REMARK 3 S31: -0.6511 S32: -0.7398 S33: -0.0514 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'U' AND (RESID 194 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4174 4.6999 50.0670 REMARK 3 T TENSOR REMARK 3 T11: 0.2172 T22: 0.4224 REMARK 3 T33: 0.3624 T12: -0.0172 REMARK 3 T13: 0.0074 T23: -0.0291 REMARK 3 L TENSOR REMARK 3 L11: 3.7196 L22: 2.8422 REMARK 3 L33: 3.5863 L12: 0.5181 REMARK 3 L13: -0.8353 L23: -1.5358 REMARK 3 S TENSOR REMARK 3 S11: 0.2646 S12: -1.0932 S13: -0.2009 REMARK 3 S21: 0.3458 S22: -0.3418 S23: -0.0388 REMARK 3 S31: -0.0049 S32: 0.2791 S33: 0.2754 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'U' AND (RESID 227 THROUGH 273 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.5034 -2.2309 44.6044 REMARK 3 T TENSOR REMARK 3 T11: 0.3113 T22: 0.3935 REMARK 3 T33: 0.3319 T12: -0.0193 REMARK 3 T13: 0.0800 T23: 0.0631 REMARK 3 L TENSOR REMARK 3 L11: 5.0797 L22: 3.2027 REMARK 3 L33: 3.3425 L12: 1.5802 REMARK 3 L13: 0.0214 L23: 0.5241 REMARK 3 S TENSOR REMARK 3 S11: 0.1138 S12: -0.5148 S13: -0.2282 REMARK 3 S21: 0.7445 S22: -0.0302 S23: 0.4076 REMARK 3 S31: -0.0263 S32: -0.4534 S33: -0.0644 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'U' AND (RESID 274 THROUGH 339 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.0843 -2.8963 33.3832 REMARK 3 T TENSOR REMARK 3 T11: 0.2001 T22: 0.1901 REMARK 3 T33: 0.2416 T12: -0.0408 REMARK 3 T13: -0.0186 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 3.2926 L22: 1.6555 REMARK 3 L33: 3.4675 L12: -0.2463 REMARK 3 L13: -0.1496 L23: 0.1570 REMARK 3 S TENSOR REMARK 3 S11: 0.0573 S12: -0.0448 S13: 0.0352 REMARK 3 S21: -0.1760 S22: -0.0194 S23: 0.0821 REMARK 3 S31: 0.0689 S32: -0.0318 S33: -0.0205 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'U' AND (RESID 340 THROUGH 364 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.2243 -8.5713 29.4643 REMARK 3 T TENSOR REMARK 3 T11: 0.1890 T22: 0.2859 REMARK 3 T33: 0.3794 T12: -0.0168 REMARK 3 T13: -0.0294 T23: -0.0225 REMARK 3 L TENSOR REMARK 3 L11: 4.5590 L22: 5.8345 REMARK 3 L33: 2.5047 L12: -3.7360 REMARK 3 L13: -2.1096 L23: 0.2998 REMARK 3 S TENSOR REMARK 3 S11: -0.2323 S12: -0.0347 S13: -0.8966 REMARK 3 S21: 0.2556 S22: 0.1420 S23: 1.1427 REMARK 3 S31: 0.0537 S32: 0.0048 S33: 0.1124 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'U' AND (RESID 365 THROUGH 389 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7865 -0.8963 55.7526 REMARK 3 T TENSOR REMARK 3 T11: 0.3742 T22: 1.1056 REMARK 3 T33: 0.5267 T12: -0.0677 REMARK 3 T13: -0.0521 T23: 0.0368 REMARK 3 L TENSOR REMARK 3 L11: 1.2980 L22: 2.7550 REMARK 3 L33: 8.0306 L12: -0.0450 REMARK 3 L13: -1.2506 L23: 1.5665 REMARK 3 S TENSOR REMARK 3 S11: -0.1706 S12: -0.6664 S13: 0.0081 REMARK 3 S21: 0.7559 S22: -0.6342 S23: -0.4965 REMARK 3 S31: -1.6158 S32: 0.2606 S33: 0.1454 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4OZR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000200360. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9536 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13311 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 69.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM TRIS PH 7.5, 150 MM NACL, 5% REMARK 280 GLYCEROL, 5 MM DTT, 0.02% AZIDE, 0.37 MM METHYLENE LACTAM, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 76.83550 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 21.21500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 76.83550 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 21.21500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2120 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21480 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -6.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, U REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -39.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E, U REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -40.28740 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 76.73618 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2080 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: U REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -40.28740 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 76.73618 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU E 290 CG CD OE1 OE2 REMARK 470 PHE E 328 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG E 329 CG CD NE CZ NH1 NH2 REMARK 470 HIS E 330 CG ND1 CD2 CE1 NE2 REMARK 470 ARG E 379 CG CD NE CZ NH1 NH2 REMARK 470 GLU E 440 CG CD OE1 OE2 REMARK 470 GLU E 459 CG CD OE1 OE2 REMARK 470 LYS E 502 CG CD CE NZ REMARK 470 LYS E 504 CG CD CE NZ REMARK 470 GLU E 514 CG CD OE1 OE2 REMARK 470 GLN U 203 CG CD OE1 NE2 REMARK 470 ASP U 386 CG OD1 OD2 REMARK 470 MET U 387 CG SD CE REMARK 470 LEU U 388 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O GLY U 256 O HOH U 437 1.85 REMARK 500 O HOH U 407 O HOH U 416 1.90 REMARK 500 O HOH U 438 O HOH U 461 1.93 REMARK 500 OE2 GLU U 214 O HOH U 401 2.03 REMARK 500 O HOH U 455 O HOH U 457 2.04 REMARK 500 O HOH U 417 O HOH U 420 2.05 REMARK 500 O THR U 337 O HOH U 439 2.09 REMARK 500 O MET E 422 NH2 ARG E 469 2.13 REMARK 500 OE1 GLU U 343 O HOH U 402 2.14 REMARK 500 O HOH E 621 O HOH E 625 2.15 REMARK 500 OE2 GLU U 240 O HOH U 426 2.16 REMARK 500 NE ARG U 254 O HOH U 403 2.17 REMARK 500 NE2 GLN U 272 O HOH U 404 2.18 REMARK 500 O HOH U 406 O HOH U 411 2.19 REMARK 500 NH1 ARG E 468 O HOH E 601 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH U 412 O HOH U 412 2556 1.47 REMARK 500 O HOH E 626 O HOH U 425 2556 2.14 REMARK 500 O HOH U 418 O HOH U 419 4556 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO E 471 C - N - CA ANGL. DEV. = -14.3 DEGREES REMARK 500 GLU U 367 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO E 286 -140.95 -85.61 REMARK 500 GLU E 287 39.94 -82.50 REMARK 500 GLU E 287 25.73 -70.13 REMARK 500 PRO E 305 123.88 -37.04 REMARK 500 PHE E 438 35.68 -91.12 REMARK 500 ASP E 466 32.97 -88.23 REMARK 500 ASN E 467 -52.68 -130.05 REMARK 500 ARG E 469 -179.45 -60.87 REMARK 500 LYS E 470 79.39 -111.85 REMARK 500 LEU E 508 108.56 -179.10 REMARK 500 PRO E 510 106.27 -41.52 REMARK 500 PHE E 511 -172.91 164.05 REMARK 500 VAL U 198 33.21 -90.22 REMARK 500 HIS U 221 -1.72 70.52 REMARK 500 LEU U 286 -67.88 -131.47 REMARK 500 LEU U 366 27.95 90.06 REMARK 500 HIS U 368 123.54 -10.94 REMARK 500 HIS U 368 108.36 13.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 PRO E 471 ARG E 472 137.92 REMARK 500 LEU U 384 MET U 385 147.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OZT RELATED DB: PDB DBREF 4OZR E 282 514 UNP E0VVT4 E0VVT4_PEDHC 282 514 DBREF 4OZR U 196 389 UNP E0VFQ5 E0VFQ5_PEDHC 222 415 SEQADV 4OZR E UNP E0VVT4 LEU 310 DELETION SEQADV 4OZR E UNP E0VVT4 LYS 311 DELETION SEQADV 4OZR E UNP E0VVT4 ARG 312 DELETION SEQADV 4OZR E UNP E0VVT4 ILE 313 DELETION SEQADV 4OZR E UNP E0VVT4 SER 314 DELETION SEQADV 4OZR E UNP E0VVT4 ASN 315 DELETION SEQADV 4OZR E UNP E0VVT4 ALA 316 DELETION SEQADV 4OZR E UNP E0VVT4 PRO 317 DELETION SEQADV 4OZR E UNP E0VVT4 SER 318 DELETION SEQADV 4OZR E UNP E0VVT4 GLU 319 DELETION SEQADV 4OZR E UNP E0VVT4 GLY 320 DELETION SEQADV 4OZR E UNP E0VVT4 GLU 321 DELETION SEQADV 4OZR E UNP E0VVT4 ASP 322 DELETION SEQADV 4OZR E UNP E0VVT4 GLN 323 DELETION SEQADV 4OZR E UNP E0VVT4 SER 324 DELETION SEQADV 4OZR E UNP E0VVT4 ASP 325 DELETION SEQADV 4OZR E UNP E0VVT4 LEU 326 DELETION SEQADV 4OZR E UNP E0VVT4 ASN 327 DELETION SEQADV 4OZR E UNP E0VVT4 PHE 389 DELETION SEQADV 4OZR E UNP E0VVT4 ALA 390 DELETION SEQADV 4OZR E UNP E0VVT4 ASN 391 DELETION SEQADV 4OZR E UNP E0VVT4 ASN 392 DELETION SEQADV 4OZR E UNP E0VVT4 GLN 393 DELETION SEQADV 4OZR E UNP E0VVT4 PRO 394 DELETION SEQADV 4OZR E UNP E0VVT4 TYR 395 DELETION SEQADV 4OZR E UNP E0VVT4 THR 396 DELETION SEQADV 4OZR E UNP E0VVT4 ARG 397 DELETION SEQADV 4OZR E UNP E0VVT4 ASP 398 DELETION SEQADV 4OZR E UNP E0VVT4 SER 399 DELETION SEQADV 4OZR E UNP E0VVT4 TYR 400 DELETION SEQADV 4OZR E UNP E0VVT4 SER 401 DELETION SEQADV 4OZR E UNP E0VVT4 LEU 402 DELETION SEQADV 4OZR E UNP E0VVT4 ALA 403 DELETION SEQADV 4OZR E UNP E0VVT4 GLY 404 DELETION SEQADV 4OZR E UNP E0VVT4 MET 405 DELETION SEQADV 4OZR E UNP E0VVT4 GLY 406 DELETION SEQADV 4OZR ALA E 407 UNP E0VVT4 GLU 407 CONFLICT SEQRES 1 E 197 LYS PRO ILE SER PRO GLU GLN GLU GLU LEU ILE HIS ARG SEQRES 2 E 197 LEU VAL TYR PHE GLN ASN GLU TYR GLU GLN PRO SER ASP SEQRES 3 E 197 GLU ASP PHE ARG HIS ILE THR GLU ILE THR ILE LEU THR SEQRES 4 E 197 VAL GLN LEU ILE VAL GLU PHE ALA LYS ARG LEU PRO GLY SEQRES 5 E 197 PHE ASP LYS LEU LEU ARG GLU ASP GLN ILE ALA LEU LEU SEQRES 6 E 197 LYS ALA CYS SER SER GLU VAL MET MET LEU ARG MET ALA SEQRES 7 E 197 ARG ARG TYR ASP VAL GLY SER ASP SER ILE LEU ALA THR SEQRES 8 E 197 VAL ASP ASP LEU LEU ARG PHE CYS ARG GLN MET TYR GLY SEQRES 9 E 197 MET LYS VAL ASP ASN ALA GLU TYR ALA LEU LEU THR ALA SEQRES 10 E 197 ILE VAL ILE PHE SER GLU ARG PRO SER LEU ILE GLU GLY SEQRES 11 E 197 TRP LYS VAL GLU LYS ILE GLN GLU ILE TYR LEU GLU ALA SEQRES 12 E 197 LEU LYS VAL TYR VAL ASP ASN ARG ARG LYS PRO ARG SER SEQRES 13 E 197 GLY THR ILE PHE ALA LYS LEU LEU SER VAL LEU THR GLU SEQRES 14 E 197 LEU ARG THR LEU GLY ASN LEU ASN SER GLU MET CYS PHE SEQRES 15 E 197 SER LEU LYS LEU LYS ASN LYS LYS LEU PRO PRO PHE LEU SEQRES 16 E 197 ALA GLU SEQRES 1 U 196 ALA ALA ASN ALA VAL ALA ASN ILE CYS GLN ALA THR ASN SEQRES 2 U 196 THR GLN LEU TYR GLN LEU VAL GLU TRP ALA LYS HIS ILE SEQRES 3 U 196 PRO HIS PHE SER SER LEU PRO ILE GLU ASP GLN VAL LEU SEQRES 4 U 196 LEU LEU ARG ALA GLY TRP ASN GLU LEU LEU ILE ALA ALA SEQRES 5 U 196 PHE SER HIS ARG SER VAL GLU VAL ARG ASP GLY ILE VAL SEQRES 6 U 196 LEU GLY ALA GLY ILE THR VAL HIS ARG ASN SER ALA HIS SEQRES 7 U 196 GLN ALA GLY VAL GLY THR ILE PHE ASP ARG VAL LEU THR SEQRES 8 U 196 GLU LEU VAL ALA LYS MET ARG ASP MET ASN MET ASP ARG SEQRES 9 U 196 THR GLU LEU GLY SER LEU ARG SER ILE ILE LEU PHE ASN SEQRES 10 U 196 PRO GLU VAL ARG GLY LEU LYS SER GLY GLN GLU VAL GLU SEQRES 11 U 196 LEU LEU ARG GLU LYS VAL TYR ALA ALA LEU GLU GLU TYR SEQRES 12 U 196 THR ARG VAL THR ARG PRO GLU GLU PRO GLY ARG PHE ALA SEQRES 13 U 196 LYS LEU LEU LEU ARG LEU PRO ALA LEU ARG SER ILE GLY SEQRES 14 U 196 LEU LYS CYS LEU GLU HIS LEU PHE PHE PHE ARG LEU ILE SEQRES 15 U 196 GLY ASP ILE PRO ILE ASP THR PHE LEU MET ASP MET LEU SEQRES 16 U 196 GLY FORMUL 3 HOH *91(H2 O) HELIX 1 AA1 GLU E 287 TYR E 302 1 16 HELIX 2 AA2 THR E 332 LEU E 349 1 18 HELIX 3 AA3 LEU E 356 ARG E 378 1 23 HELIX 4 AA4 VAL E 409 LYS E 423 1 15 HELIX 5 AA5 ASP E 425 PHE E 438 1 14 HELIX 6 AA6 GLU E 446 ARG E 469 1 24 HELIX 7 AA7 THR E 475 ASN E 505 1 31 HELIX 8 AA8 ASN U 200 HIS U 218 1 19 HELIX 9 AA9 PRO U 226 SER U 250 1 25 HELIX 10 AB1 VAL U 251 VAL U 253 5 3 HELIX 11 AB2 ARG U 267 GLY U 274 1 8 HELIX 12 AB3 VAL U 275 LEU U 286 1 12 HELIX 13 AB4 LEU U 286 ASN U 294 1 9 HELIX 14 AB5 ASP U 296 PHE U 309 1 14 HELIX 15 AB6 SER U 318 ARG U 341 1 24 HELIX 16 AB7 GLY U 346 LEU U 353 1 8 HELIX 17 AB8 LEU U 353 CYS U 365 1 13 HELIX 18 AB9 ARG U 373 GLY U 376 5 4 HELIX 19 AC1 ASP U 377 THR U 382 1 6 SHEET 1 AA1 2 GLY U 256 VAL U 258 0 SHEET 2 AA1 2 THR U 264 HIS U 266 -1 O VAL U 265 N ILE U 257 CISPEP 1 VAL E 382 GLY E 383 0 -0.11 CISPEP 2 GLY E 383 SER E 384 0 -2.83 CISPEP 3 ARG E 472 SER E 473 0 1.97 CISPEP 4 SER E 473 GLY E 474 0 5.98 CRYST1 153.671 42.430 86.669 90.00 117.70 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006507 0.000000 0.003416 0.00000 SCALE2 0.000000 0.023568 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013032 0.00000