HEADER LYASE 05-MAR-14 4P2X TITLE SWAPPED DIMER OF MYCOBACTERIAL ADENYLYL CYCLASE RV1625C: FORM 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADENYLATE CYCLASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: ATP PYROPHOSPHATE-LYASE,ADENYLYL CYCLASE; COMPND 5 EC: 4.6.1.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: CYA, RV1625C, MT1661, MTCY01B2.17C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: P-PROEXHT KEYWDS ADENYLYL CYCLASE, BETA-ALPHA-BETA SANDWICH, DOMAIN SWAPPING, SIGNAL KEYWDS 2 TRANSDUCTION, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR D.V.BARATHY,R.MATTOO,S.S.VISWESWARIAH,K.SUGUNA REVDAT 4 27-SEP-23 4P2X 1 REMARK REVDAT 3 01-NOV-17 4P2X 1 SOURCE KEYWDS REMARK REVDAT 2 22-OCT-14 4P2X 1 JRNL REVDAT 1 17-SEP-14 4P2X 0 JRNL AUTH D.BARATHY,R.MATTOO,S.VISWESWARIAH,K.SUGUNA JRNL TITL NEW STRUCTURAL FORMS OF A MYCOBACTERIAL ADENYLYL CYCLASE JRNL TITL 2 RV1625C. JRNL REF IUCRJ V. 1 338 2014 JRNL REFN ESSN 2052-2525 JRNL PMID 25295175 JRNL DOI 10.1107/S2052252514016741 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 15982 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.260 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 849 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.46 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1185 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.52 REMARK 3 BIN R VALUE (WORKING SET) : 0.2190 REMARK 3 BIN FREE R VALUE SET COUNT : 61 REMARK 3 BIN FREE R VALUE : 0.2970 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2535 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 53 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.33000 REMARK 3 B22 (A**2) : -0.33000 REMARK 3 B33 (A**2) : 1.07000 REMARK 3 B12 (A**2) : -0.33000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.334 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.258 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.179 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.476 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.942 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2622 ; 0.007 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2509 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3555 ; 1.151 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5728 ; 0.705 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 333 ; 5.610 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;32.391 ;23.684 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 375 ;16.873 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;14.128 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 407 ; 0.066 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2971 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 587 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4P2X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200570. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.978565 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : BENT COLLIMATING MIRROR AND REMARK 200 TOROID REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : IMOSFLM 1.0.7 REMARK 200 DATA SCALING SOFTWARE : SCALA CCP4 6.3 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16832 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 37.780 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.50 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 23.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.53 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 11.50 REMARK 200 R MERGE FOR SHELL (I) : 0.52600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 4P2M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 35.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M LITHIUM SULPHATE, TRIS PH 8.5, REMARK 280 25% PEG 3350, EVAPORATION, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 88.78000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 44.39000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 66.58500 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 22.19500 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 110.97500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: DIMER IN SOLUTION CONFIRMED BY GEL FILTRATION REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7830 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -65.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 187 REMARK 465 SER A 188 REMARK 465 TYR A 189 REMARK 465 TYR A 190 REMARK 465 HIS A 191 REMARK 465 HIS A 192 REMARK 465 HIS A 193 REMARK 465 HIS A 194 REMARK 465 HIS A 195 REMARK 465 HIS A 196 REMARK 465 ASP A 197 REMARK 465 TYR A 198 REMARK 465 ASP A 199 REMARK 465 ILE A 200 REMARK 465 PRO A 201 REMARK 465 THR A 202 REMARK 465 THR A 203 REMARK 465 GLU A 204 REMARK 465 ASN A 205 REMARK 465 LEU A 206 REMARK 465 TYR A 207 REMARK 465 PHE A 208 REMARK 465 GLN A 209 REMARK 465 GLY A 210 REMARK 465 ALA A 211 REMARK 465 MET A 212 REMARK 465 GLU A 213 REMARK 465 ALA A 214 REMARK 465 GLU A 215 REMARK 465 HIS A 216 REMARK 465 ASP A 217 REMARK 465 ARG A 218 REMARK 465 SER A 219 REMARK 465 GLU A 220 REMARK 465 ALA A 221 REMARK 465 LEU A 222 REMARK 465 LEU A 223 REMARK 465 ALA A 224 REMARK 465 ASN A 225 REMARK 465 MET A 226 REMARK 465 LEU A 227 REMARK 465 PRO A 228 REMARK 465 ALA A 229 REMARK 465 SER A 230 REMARK 465 ILE A 231 REMARK 465 ALA A 232 REMARK 465 GLU A 233 REMARK 465 ARG A 234 REMARK 465 LEU A 235 REMARK 465 LYS A 236 REMARK 465 GLU A 237 REMARK 465 PRO A 238 REMARK 465 GLU A 239 REMARK 465 GLY A 259 REMARK 465 PHE A 260 REMARK 465 THR A 261 REMARK 465 GLU A 262 REMARK 465 ARG A 263 REMARK 465 ALA A 264 REMARK 465 SER A 265 REMARK 465 SER A 266 REMARK 465 THR A 267 REMARK 465 ALA A 268 REMARK 465 ASP A 271 REMARK 465 VAL A 297 REMARK 465 SER A 298 REMARK 465 GLY A 338 REMARK 465 VAL A 410 REMARK 465 LYS A 411 REMARK 465 GLY A 412 REMARK 465 LYS A 413 REMARK 465 GLY A 414 REMARK 465 VAL A 426 REMARK 465 ALA A 427 REMARK 465 ALA A 428 REMARK 465 ASP A 429 REMARK 465 PRO A 430 REMARK 465 GLY A 431 REMARK 465 GLU A 432 REMARK 465 VAL A 433 REMARK 465 ARG A 434 REMARK 465 GLY A 435 REMARK 465 ALA A 436 REMARK 465 GLU A 437 REMARK 465 PRO A 438 REMARK 465 ARG A 439 REMARK 465 THR A 440 REMARK 465 ALA A 441 REMARK 465 GLY A 442 REMARK 465 VAL A 443 REMARK 465 MET B 187 REMARK 465 SER B 188 REMARK 465 TYR B 189 REMARK 465 TYR B 190 REMARK 465 HIS B 191 REMARK 465 HIS B 192 REMARK 465 HIS B 193 REMARK 465 HIS B 194 REMARK 465 HIS B 195 REMARK 465 HIS B 196 REMARK 465 ASP B 197 REMARK 465 TYR B 198 REMARK 465 ASP B 199 REMARK 465 ILE B 200 REMARK 465 PRO B 201 REMARK 465 THR B 202 REMARK 465 THR B 203 REMARK 465 GLU B 204 REMARK 465 ASN B 205 REMARK 465 LEU B 206 REMARK 465 TYR B 207 REMARK 465 PHE B 208 REMARK 465 GLN B 209 REMARK 465 GLY B 210 REMARK 465 ALA B 211 REMARK 465 MET B 212 REMARK 465 GLU B 213 REMARK 465 ALA B 214 REMARK 465 GLU B 215 REMARK 465 HIS B 216 REMARK 465 ASP B 217 REMARK 465 ARG B 218 REMARK 465 SER B 219 REMARK 465 GLU B 220 REMARK 465 ALA B 221 REMARK 465 LEU B 222 REMARK 465 LEU B 223 REMARK 465 ALA B 224 REMARK 465 ASN B 225 REMARK 465 MET B 226 REMARK 465 LEU B 227 REMARK 465 PRO B 228 REMARK 465 ALA B 229 REMARK 465 SER B 230 REMARK 465 ILE B 231 REMARK 465 ALA B 232 REMARK 465 GLU B 233 REMARK 465 ARG B 234 REMARK 465 LEU B 235 REMARK 465 LYS B 236 REMARK 465 GLU B 237 REMARK 465 PRO B 238 REMARK 465 GLY B 259 REMARK 465 PHE B 260 REMARK 465 THR B 261 REMARK 465 GLU B 262 REMARK 465 ARG B 263 REMARK 465 ALA B 264 REMARK 465 SER B 265 REMARK 465 SER B 266 REMARK 465 THR B 267 REMARK 465 ALA B 268 REMARK 465 PRO B 269 REMARK 465 ALA B 270 REMARK 465 ASP B 271 REMARK 465 LEU B 272 REMARK 465 VAL B 273 REMARK 465 PRO B 336 REMARK 465 ASP B 381 REMARK 465 SER B 382 REMARK 465 ASP B 429 REMARK 465 PRO B 430 REMARK 465 GLY B 431 REMARK 465 GLU B 432 REMARK 465 VAL B 433 REMARK 465 ARG B 434 REMARK 465 GLY B 435 REMARK 465 ALA B 436 REMARK 465 GLU B 437 REMARK 465 PRO B 438 REMARK 465 ARG B 439 REMARK 465 THR B 440 REMARK 465 ALA B 441 REMARK 465 GLY B 442 REMARK 465 VAL B 443 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 272 CG CD1 CD2 REMARK 470 LEU A 276 CG CD1 CD2 REMARK 470 ARG A 278 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 285 CG CD OE1 OE2 REMARK 470 LYS A 296 CG CD CE NZ REMARK 470 LEU A 333 CG CD1 CD2 REMARK 470 LYS A 334 CG CD CE NZ REMARK 470 ARG A 337 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 344 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 361 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 376 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 403 CG CD NE CZ NH1 NH2 REMARK 470 ASN A 409 CG OD1 ND2 REMARK 470 VAL A 415 CG1 CG2 REMARK 470 GLU B 239 CG CD OE1 OE2 REMARK 470 ARG B 240 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 246 CG CD CE NZ REMARK 470 ARG B 274 CG CD NE CZ NH1 NH2 REMARK 470 LEU B 276 CG CD1 CD2 REMARK 470 ARG B 278 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 285 CG CD OE1 OE2 REMARK 470 GLN B 289 CG CD OE1 NE2 REMARK 470 LYS B 296 CG CD CE NZ REMARK 470 ASP B 300 CB CG OD1 OD2 REMARK 470 GLN B 332 CG CD OE1 NE2 REMARK 470 LYS B 334 CG CD CE NZ REMARK 470 ARG B 337 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 378 CG CD OE1 OE2 REMARK 470 THR B 380 OG1 CG2 REMARK 470 GLU B 391 CG CD OE1 OE2 REMARK 470 ARG B 403 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 411 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 300 39.60 -98.84 REMARK 500 ASP A 314 31.49 -96.03 REMARK 500 SER B 379 174.56 58.83 REMARK 500 LYS B 413 -60.72 -131.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 504 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 245 OD1 REMARK 620 2 TYR A 247 OH 96.2 REMARK 620 3 ALA A 354 O 109.4 108.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CL B 503 DBREF 4P2X A 212 443 UNP P0A4Y0 CYA1_MYCTU 212 443 DBREF 4P2X B 212 443 UNP P0A4Y0 CYA1_MYCTU 212 443 SEQADV 4P2X MET A 187 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X SER A 188 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR A 189 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR A 190 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 191 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 192 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 193 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 194 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 195 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS A 196 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASP A 197 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR A 198 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASP A 199 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ILE A 200 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X PRO A 201 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X THR A 202 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X THR A 203 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLU A 204 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASN A 205 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X LEU A 206 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR A 207 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X PHE A 208 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLN A 209 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLY A 210 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ALA A 211 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X MET B 187 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X SER B 188 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR B 189 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR B 190 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 191 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 192 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 193 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 194 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 195 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X HIS B 196 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASP B 197 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR B 198 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASP B 199 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ILE B 200 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X PRO B 201 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X THR B 202 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X THR B 203 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLU B 204 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ASN B 205 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X LEU B 206 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X TYR B 207 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X PHE B 208 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLN B 209 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X GLY B 210 UNP P0A4Y0 EXPRESSION TAG SEQADV 4P2X ALA B 211 UNP P0A4Y0 EXPRESSION TAG SEQRES 1 A 257 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 A 257 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 A 257 GLU ALA GLU HIS ASP ARG SER GLU ALA LEU LEU ALA ASN SEQRES 4 A 257 MET LEU PRO ALA SER ILE ALA GLU ARG LEU LYS GLU PRO SEQRES 5 A 257 GLU ARG ASN ILE ILE ALA ASP LYS TYR ASP GLU ALA SER SEQRES 6 A 257 VAL LEU PHE ALA ASP ILE VAL GLY PHE THR GLU ARG ALA SEQRES 7 A 257 SER SER THR ALA PRO ALA ASP LEU VAL ARG PHE LEU ASP SEQRES 8 A 257 ARG LEU TYR SER ALA PHE ASP GLU LEU VAL ASP GLN HIS SEQRES 9 A 257 GLY LEU GLU LYS ILE LYS VAL SER GLY ASP SER TYR MET SEQRES 10 A 257 VAL VAL SER GLY VAL PRO ARG PRO ARG PRO ASP HIS THR SEQRES 11 A 257 GLN ALA LEU ALA ASP PHE ALA LEU ASP MET THR ASN VAL SEQRES 12 A 257 ALA ALA GLN LEU LYS ASP PRO ARG GLY ASN PRO VAL PRO SEQRES 13 A 257 LEU ARG VAL GLY LEU ALA THR GLY PRO VAL VAL ALA GLY SEQRES 14 A 257 VAL VAL GLY SER ARG ARG PHE PHE TYR ASP VAL TRP GLY SEQRES 15 A 257 ASP ALA VAL ASN VAL ALA SER ARG MET GLU SER THR ASP SEQRES 16 A 257 SER VAL GLY GLN ILE GLN VAL PRO ASP GLU VAL TYR GLU SEQRES 17 A 257 ARG LEU LYS ASP ASP PHE VAL LEU ARG GLU ARG GLY HIS SEQRES 18 A 257 ILE ASN VAL LYS GLY LYS GLY VAL MET ARG THR TRP TYR SEQRES 19 A 257 LEU ILE GLY ARG LYS VAL ALA ALA ASP PRO GLY GLU VAL SEQRES 20 A 257 ARG GLY ALA GLU PRO ARG THR ALA GLY VAL SEQRES 1 B 257 MET SER TYR TYR HIS HIS HIS HIS HIS HIS ASP TYR ASP SEQRES 2 B 257 ILE PRO THR THR GLU ASN LEU TYR PHE GLN GLY ALA MET SEQRES 3 B 257 GLU ALA GLU HIS ASP ARG SER GLU ALA LEU LEU ALA ASN SEQRES 4 B 257 MET LEU PRO ALA SER ILE ALA GLU ARG LEU LYS GLU PRO SEQRES 5 B 257 GLU ARG ASN ILE ILE ALA ASP LYS TYR ASP GLU ALA SER SEQRES 6 B 257 VAL LEU PHE ALA ASP ILE VAL GLY PHE THR GLU ARG ALA SEQRES 7 B 257 SER SER THR ALA PRO ALA ASP LEU VAL ARG PHE LEU ASP SEQRES 8 B 257 ARG LEU TYR SER ALA PHE ASP GLU LEU VAL ASP GLN HIS SEQRES 9 B 257 GLY LEU GLU LYS ILE LYS VAL SER GLY ASP SER TYR MET SEQRES 10 B 257 VAL VAL SER GLY VAL PRO ARG PRO ARG PRO ASP HIS THR SEQRES 11 B 257 GLN ALA LEU ALA ASP PHE ALA LEU ASP MET THR ASN VAL SEQRES 12 B 257 ALA ALA GLN LEU LYS ASP PRO ARG GLY ASN PRO VAL PRO SEQRES 13 B 257 LEU ARG VAL GLY LEU ALA THR GLY PRO VAL VAL ALA GLY SEQRES 14 B 257 VAL VAL GLY SER ARG ARG PHE PHE TYR ASP VAL TRP GLY SEQRES 15 B 257 ASP ALA VAL ASN VAL ALA SER ARG MET GLU SER THR ASP SEQRES 16 B 257 SER VAL GLY GLN ILE GLN VAL PRO ASP GLU VAL TYR GLU SEQRES 17 B 257 ARG LEU LYS ASP ASP PHE VAL LEU ARG GLU ARG GLY HIS SEQRES 18 B 257 ILE ASN VAL LYS GLY LYS GLY VAL MET ARG THR TRP TYR SEQRES 19 B 257 LEU ILE GLY ARG LYS VAL ALA ALA ASP PRO GLY GLU VAL SEQRES 20 B 257 ARG GLY ALA GLU PRO ARG THR ALA GLY VAL HET SO4 A 501 5 HET PEG A 502 7 HET PEG A 503 7 HET MG A 504 1 HET PEG B 501 7 HET PEG B 502 7 HET CL B 503 1 HETNAM SO4 SULFATE ION HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 PEG 4(C4 H10 O3) FORMUL 6 MG MG 2+ FORMUL 9 CL CL 1- FORMUL 10 HOH *53(H2 O) HELIX 1 AA1 VAL A 273 HIS A 290 1 18 HELIX 2 AA2 ASP A 314 LEU A 333 1 20 HELIX 3 AA3 GLY A 368 THR A 380 1 13 HELIX 4 AA4 ASP A 390 LYS A 397 1 8 HELIX 5 AA5 PHE B 275 GLY B 291 1 17 HELIX 6 AA6 ASP B 314 LEU B 333 1 20 HELIX 7 AA7 GLY B 368 ARG B 376 1 9 HELIX 8 AA8 ASP B 390 LYS B 397 1 8 SHEET 1 AA1 8 GLU A 293 ILE A 295 0 SHEET 2 AA1 8 SER A 301 SER A 306 -1 O VAL A 305 N GLU A 293 SHEET 3 AA1 8 ILE A 242 ILE A 257 -1 N ALA A 255 O TYR A 302 SHEET 4 AA1 8 LEU A 343 TRP A 367 -1 O VAL A 352 N TYR A 247 SHEET 5 AA1 8 LEU B 343 TRP B 367 -1 O ARG B 361 N SER A 359 SHEET 6 AA1 8 ILE B 242 ILE B 257 -1 N TYR B 247 O VAL B 352 SHEET 7 AA1 8 TYR B 302 SER B 306 -1 O VAL B 304 N LEU B 253 SHEET 8 AA1 8 GLU B 293 ILE B 295 -1 N GLU B 293 O VAL B 305 SHEET 1 AA2 8 PHE A 400 ILE A 408 0 SHEET 2 AA2 8 MET A 416 ARG A 424 -1 O MET A 416 N ILE A 408 SHEET 3 AA2 8 ILE A 386 PRO A 389 -1 N VAL A 388 O TRP A 419 SHEET 4 AA2 8 LEU B 343 TRP B 367 1 O VAL B 345 N GLN A 387 SHEET 5 AA2 8 LEU A 343 TRP A 367 -1 N SER A 359 O ARG B 361 SHEET 6 AA2 8 ILE B 386 PRO B 389 1 O GLN B 387 N VAL A 345 SHEET 7 AA2 8 GLY B 414 ARG B 424 -1 O LEU B 421 N ILE B 386 SHEET 8 AA2 8 PHE B 400 VAL B 410 -1 N ARG B 403 O TYR B 420 LINK OD1 ASP A 245 MG MG A 504 1555 1555 2.40 LINK OH TYR A 247 MG MG A 504 1555 1555 2.84 LINK O ALA A 354 MG MG A 504 1555 1555 2.74 CISPEP 1 VAL A 308 PRO A 309 0 -1.12 CISPEP 2 VAL B 308 PRO B 309 0 -0.11 SITE 1 AC1 5 ARG A 405 LYS B 411 GLY B 412 ARG B 424 SITE 2 AC1 5 ALA B 427 SITE 1 AC2 3 LEU A 421 ILE A 422 THR B 327 SITE 1 AC3 7 ARG A 240 TYR A 247 ASP A 248 GLU A 249 SITE 2 AC3 7 GLY A 307 PRO A 311 ARG A 312 SITE 1 AC4 4 ASP A 245 TYR A 247 ALA A 354 GLY A 355 SITE 1 AC5 6 GLY B 291 GLY B 307 VAL B 308 PRO B 309 SITE 2 AC5 6 ARG B 310 ARG B 312 SITE 1 AC6 4 ARG A 395 ASP B 314 THR B 316 GLN B 317 CRYST1 75.570 75.570 133.170 90.00 90.00 120.00 P 65 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013233 0.007640 0.000000 0.00000 SCALE2 0.000000 0.015280 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007509 0.00000