HEADER IMMUNE SYSTEM 12-MAR-14 4P48 TITLE THE STRUCTURE OF A CHICKEN ANTI-CARDIAC TROPONIN I SCFV COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIBODY SCFV 180; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_TAXID: 9031; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PHAGEMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PCOMB3X KEYWDS RECOMBINANT ANTIBODY CHICKEN, CARDIAC TROPONIN I, SCFV, KEYWDS 2 IMMUNOGLOBULIN, PHAGE DISPLAY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.J.CONROY,R.H.P.LAW,S.GILLGUNN,S.HEARTY,T.T.CARADOC-DAVIES,G.LLYOD, AUTHOR 2 R.J.O'KENNEDY,J.C.WHISSTOCK REVDAT 6 27-DEC-23 4P48 1 REMARK REVDAT 5 27-SEP-17 4P48 1 SOURCE JRNL REMARK REVDAT 4 14-JAN-15 4P48 1 DBREF REVDAT 3 01-OCT-14 4P48 1 JRNL REVDAT 2 11-JUN-14 4P48 1 JRNL REVDAT 1 23-APR-14 4P48 0 JRNL AUTH P.J.CONROY,R.H.LAW,S.GILGUNN,S.HEARTY,T.T.CARADOC-DAVIES, JRNL AUTH 2 G.LLOYD,R.J.O'KENNEDY,J.C.WHISSTOCK JRNL TITL RECONCILING THE STRUCTURAL ATTRIBUTES OF AVIAN ANTIBODIES. JRNL REF J.BIOL.CHEM. V. 289 15384 2014 JRNL REFN ESSN 1083-351X JRNL PMID 24737329 JRNL DOI 10.1074/JBC.M114.562470 REMARK 2 REMARK 2 RESOLUTION. 1.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 46638 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.156 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2360 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.7891 - 3.4654 1.00 2775 157 0.1419 0.1598 REMARK 3 2 3.4654 - 2.7530 1.00 2695 129 0.1574 0.1714 REMARK 3 3 2.7530 - 2.4057 1.00 2640 143 0.1604 0.1617 REMARK 3 4 2.4057 - 2.1860 1.00 2619 147 0.1594 0.1736 REMARK 3 5 2.1860 - 2.0295 1.00 2594 144 0.1494 0.1958 REMARK 3 6 2.0295 - 1.9099 1.00 2607 134 0.1488 0.1721 REMARK 3 7 1.9099 - 1.8144 1.00 2596 139 0.1554 0.1707 REMARK 3 8 1.8144 - 1.7354 1.00 2573 150 0.1554 0.1786 REMARK 3 9 1.7354 - 1.6687 1.00 2578 136 0.1517 0.1562 REMARK 3 10 1.6687 - 1.6111 1.00 2597 143 0.1499 0.1913 REMARK 3 11 1.6111 - 1.5607 1.00 2546 140 0.1533 0.1888 REMARK 3 12 1.5607 - 1.5161 1.00 2605 140 0.1568 0.1731 REMARK 3 13 1.5161 - 1.4762 1.00 2582 140 0.1669 0.1972 REMARK 3 14 1.4762 - 1.4402 1.00 2542 130 0.1726 0.1742 REMARK 3 15 1.4402 - 1.4075 1.00 2605 130 0.1792 0.2215 REMARK 3 16 1.4075 - 1.3776 1.00 2582 120 0.1819 0.2250 REMARK 3 17 1.3776 - 1.3500 1.00 2542 138 0.2135 0.2364 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 10.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1831 REMARK 3 ANGLE : 1.270 2500 REMARK 3 CHIRALITY : 0.085 270 REMARK 3 PLANARITY : 0.007 334 REMARK 3 DIHEDRAL : 11.606 644 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 33 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.7200 -10.0283 -2.2047 REMARK 3 T TENSOR REMARK 3 T11: 0.0251 T22: 0.0415 REMARK 3 T33: 0.0292 T12: 0.0032 REMARK 3 T13: 0.0120 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.5253 L22: 0.4356 REMARK 3 L33: 0.0877 L12: -0.0395 REMARK 3 L13: -0.0793 L23: 0.1870 REMARK 3 S TENSOR REMARK 3 S11: -0.0073 S12: 0.0264 S13: -0.0538 REMARK 3 S21: -0.0338 S22: -0.0170 S23: -0.0183 REMARK 3 S31: 0.0242 S32: 0.0608 S33: -0.0009 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 34 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.9117 1.9691 5.9153 REMARK 3 T TENSOR REMARK 3 T11: 0.0264 T22: 0.0283 REMARK 3 T33: 0.0283 T12: 0.0009 REMARK 3 T13: 0.0080 T23: 0.0075 REMARK 3 L TENSOR REMARK 3 L11: 0.3674 L22: 0.3862 REMARK 3 L33: 0.3301 L12: -0.1187 REMARK 3 L13: -0.1520 L23: 0.0710 REMARK 3 S TENSOR REMARK 3 S11: 0.0171 S12: -0.0039 S13: 0.0410 REMARK 3 S21: 0.0132 S22: -0.0124 S23: 0.0050 REMARK 3 S31: -0.0497 S32: 0.0030 S33: -0.0039 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 219 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.3838 7.8145 13.1777 REMARK 3 T TENSOR REMARK 3 T11: 0.0545 T22: 0.0596 REMARK 3 T33: 0.0874 T12: 0.0013 REMARK 3 T13: 0.0276 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.3932 L22: 1.2074 REMARK 3 L33: 1.0466 L12: -0.0177 REMARK 3 L13: -0.0308 L23: -0.6113 REMARK 3 S TENSOR REMARK 3 S11: 0.0194 S12: 0.0340 S13: 0.0141 REMARK 3 S21: -0.0173 S22: 0.0553 S23: 0.2055 REMARK 3 S31: -0.0103 S32: -0.1800 S33: -0.0338 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 220 THROUGH 250 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.5808 5.9750 8.0865 REMARK 3 T TENSOR REMARK 3 T11: 0.0371 T22: 0.0248 REMARK 3 T33: 0.0304 T12: 0.0035 REMARK 3 T13: 0.0137 T23: 0.0053 REMARK 3 L TENSOR REMARK 3 L11: 0.6319 L22: 0.4278 REMARK 3 L33: 0.5213 L12: 0.1074 REMARK 3 L13: -0.1668 L23: -0.1890 REMARK 3 S TENSOR REMARK 3 S11: 0.0486 S12: -0.0161 S13: 0.0286 REMARK 3 S21: -0.0306 S22: -0.0362 S23: 0.0026 REMARK 3 S31: -0.0649 S32: 0.0589 S33: 0.0170 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4P48 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200514. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.6 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953689 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 (SI111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46638 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.350 REMARK 200 RESOLUTION RANGE LOW (A) : 19.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.900 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.5700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 7.70 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.83 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.83 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL PH9.6, 0.2M NAOAC, 29% REMARK 280 (W/V) PEG 4000 WITH 0.1M GLYCINE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.89000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.52400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 29.18950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.52400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.89000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 29.18950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 112 REMARK 465 SER A 113 REMARK 465 SER A 114 REMARK 465 ARG A 115 REMARK 465 SER A 116 REMARK 465 SER A 117 REMARK 465 GLY A 118 REMARK 465 GLY A 119 REMARK 465 GLY A 120 REMARK 465 GLY A 121 REMARK 465 SER A 122 REMARK 465 GLY A 123 REMARK 465 GLY A 124 REMARK 465 GLY A 125 REMARK 465 GLY A 126 REMARK 465 SER A 127 REMARK 465 SER A 128 REMARK 465 THR A 253 REMARK 465 SER A 254 REMARK 465 GLY A 255 REMARK 465 GLN A 256 REMARK 465 ALA A 257 REMARK 465 GLY A 258 REMARK 465 GLN A 259 REMARK 465 HIS A 260 REMARK 465 HIS A 261 REMARK 465 HIS A 262 REMARK 465 HIS A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 GLY A 266 REMARK 465 ALA A 267 REMARK 465 TYR A 268 REMARK 465 PRO A 269 REMARK 465 TYR A 270 REMARK 465 ASP A 271 REMARK 465 VAL A 272 REMARK 465 PRO A 273 REMARK 465 ASP A 274 REMARK 465 TYR A 275 REMARK 465 ALA A 276 REMARK 465 SER A 277 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 521 O HOH A 614 2.15 REMARK 500 O HOH A 594 O HOH A 623 2.16 REMARK 500 O HOH A 304 O HOH A 392 2.18 REMARK 500 OG1 THR A 131 OG SER A 153 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 340 O HOH A 397 4445 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 CYS A 89 CA - CB - SG ANGL. DEV. = 7.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 52 -49.99 72.65 REMARK 500 ASP A 183 -10.71 77.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4P49 RELATED DB: PDB DBREF 4P48 A 1 277 PDB 4P48 4P48 1 277 SEQRES 1 A 277 ALA LEU THR GLN PRO SER SER VAL SER ALA ASN PRO GLY SEQRES 2 A 277 GLY THR VAL GLU ILE THR CYS SER GLY GLY GLY ARG TYR SEQRES 3 A 277 TYR ASP GLY SER TYR TYR TYR GLY TRP TYR GLN GLN LYS SEQRES 4 A 277 SER PRO GLY SER ALA PRO VAL THR VAL ILE TYR GLU ASN SEQRES 5 A 277 THR LYS ARG PRO SER ASN ILE PRO SER ARG PHE SER GLY SEQRES 6 A 277 SER LYS SER GLY SER THR ALA THR LEU THR ILE THR GLY SEQRES 7 A 277 VAL ARG ALA GLU ASP GLU ALA VAL TYR TYR CYS GLY SER SEQRES 8 A 277 ALA ASP ASP ASN MET ASN PRO THR ILE PHE GLY ALA GLY SEQRES 9 A 277 THR THR LEU THR VAL LEU GLY GLY SER SER ARG SER SER SEQRES 10 A 277 GLY GLY GLY GLY SER GLY GLY GLY GLY SER SER ALA LEU SEQRES 11 A 277 THR LEU ASP GLU SER GLY GLY GLY LEU GLN THR PRO GLY SEQRES 12 A 277 GLY ALA LEU SER LEU VAL CYS LYS ALA SER GLY PHE THR SEQRES 13 A 277 PHE SER SER TYR GLY MET GLN TRP VAL ARG GLN ALA PRO SEQRES 14 A 277 GLY LYS GLY LEU GLU TRP VAL ALA GLY ILE GLN ASN ASP SEQRES 15 A 277 ASP THR GLY THR TYR TYR GLY ALA ALA VAL LYS GLY ARG SEQRES 16 A 277 ALA THR ILE SER ARG ASP ASN GLY GLN SER THR VAL ARG SEQRES 17 A 277 LEU GLN LEU ASN ASN LEU ARG ALA GLU ASP THR GLY THR SEQRES 18 A 277 TYR TYR CYS ALA LYS ASP ALA SER SER ASP GLY GLY TYR SEQRES 19 A 277 GLY GLY ASP SER ILE ASP ALA TRP GLY HIS GLY THR GLU SEQRES 20 A 277 VAL ILE VAL SER SER THR SER GLY GLN ALA GLY GLN HIS SEQRES 21 A 277 HIS HIS HIS HIS HIS GLY ALA TYR PRO TYR ASP VAL PRO SEQRES 22 A 277 ASP TYR ALA SER FORMUL 2 HOH *361(H2 O) HELIX 1 AA1 ARG A 80 GLU A 84 5 5 HELIX 2 AA2 THR A 156 TYR A 160 5 5 HELIX 3 AA3 ARG A 215 THR A 219 5 5 SHEET 1 AA1 5 SER A 7 ALA A 10 0 SHEET 2 AA1 5 THR A 105 VAL A 109 1 O THR A 108 N VAL A 8 SHEET 3 AA1 5 ALA A 85 SER A 91 -1 N ALA A 85 O LEU A 107 SHEET 4 AA1 5 GLY A 34 GLN A 38 -1 N TYR A 36 O TYR A 88 SHEET 5 AA1 5 VAL A 46 ILE A 49 -1 O ILE A 49 N TRP A 35 SHEET 1 AA2 4 SER A 7 ALA A 10 0 SHEET 2 AA2 4 THR A 105 VAL A 109 1 O THR A 108 N VAL A 8 SHEET 3 AA2 4 ALA A 85 SER A 91 -1 N ALA A 85 O LEU A 107 SHEET 4 AA2 4 ILE A 100 PHE A 101 -1 O ILE A 100 N SER A 91 SHEET 1 AA3 3 THR A 15 CYS A 20 0 SHEET 2 AA3 3 THR A 71 THR A 77 -1 O LEU A 74 N ILE A 18 SHEET 3 AA3 3 PHE A 63 SER A 68 -1 N SER A 64 O THR A 75 SHEET 1 AA4 4 THR A 131 SER A 135 0 SHEET 2 AA4 4 LEU A 146 SER A 153 -1 O LYS A 151 N ASP A 133 SHEET 3 AA4 4 THR A 206 LEU A 211 -1 O VAL A 207 N CYS A 150 SHEET 4 AA4 4 ALA A 196 ASP A 201 -1 N SER A 199 O ARG A 208 SHEET 1 AA5 6 GLY A 138 GLN A 140 0 SHEET 2 AA5 6 THR A 246 VAL A 250 1 O ILE A 249 N GLN A 140 SHEET 3 AA5 6 GLY A 220 ASP A 227 -1 N GLY A 220 O VAL A 248 SHEET 4 AA5 6 MET A 162 GLN A 167 -1 N VAL A 165 O TYR A 223 SHEET 5 AA5 6 LEU A 173 ILE A 179 -1 O GLU A 174 N ARG A 166 SHEET 6 AA5 6 TYR A 187 TYR A 188 -1 O TYR A 187 N GLY A 178 SHEET 1 AA6 4 GLY A 138 GLN A 140 0 SHEET 2 AA6 4 THR A 246 VAL A 250 1 O ILE A 249 N GLN A 140 SHEET 3 AA6 4 GLY A 220 ASP A 227 -1 N GLY A 220 O VAL A 248 SHEET 4 AA6 4 ILE A 239 TRP A 242 -1 O ALA A 241 N LYS A 226 SSBOND 1 CYS A 20 CYS A 89 1555 1555 1.93 SSBOND 2 CYS A 150 CYS A 224 1555 1555 2.04 CRYST1 51.780 58.379 69.048 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019312 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017129 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014483 0.00000