HEADER IMMUNE SYSTEM 12-MAR-14 4P49 TITLE THE STRUCTURE OF A CHICKEN ANTI-PROSTATE SPECIFIC ANTIGEN SCFV COMPND MOL_ID: 1; COMPND 2 MOLECULE: ANTIBODY SCFV B8; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_TAXID: 9031; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PHAGEMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PCOMB3X KEYWDS RECOMBINANT ANTIBODY, CHICKEN, CARDIAC TROPONIN I, SCFV, KEYWDS 2 IMMUNOGLOBULIN, PHAGE DISPLAY, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR P.J.CONROY,R.H.P.LAW,S.GILGUNN,S.HEARTY,G.LLYOD,T.T.CARADOC-DAVIES, AUTHOR 2 R.J.O'KENNEDY,J.C.WHISSTOCK REVDAT 7 27-DEC-23 4P49 1 REMARK REVDAT 6 27-SEP-17 4P49 1 SOURCE JRNL REMARK REVDAT 5 14-JAN-15 4P49 1 DBREF REVDAT 4 01-OCT-14 4P49 1 JRNL REVDAT 3 06-AUG-14 4P49 1 AUTHOR REVDAT 2 11-JUN-14 4P49 1 JRNL REVDAT 1 23-APR-14 4P49 0 JRNL AUTH P.J.CONROY,R.H.LAW,S.GILGUNN,S.HEARTY,T.T.CARADOC-DAVIES, JRNL AUTH 2 G.LLOYD,R.J.O'KENNEDY,J.C.WHISSTOCK JRNL TITL RECONCILING THE STRUCTURAL ATTRIBUTES OF AVIAN ANTIBODIES. JRNL REF J.BIOL.CHEM. V. 289 15384 2014 JRNL REFN ESSN 1083-351X JRNL PMID 24737329 JRNL DOI 10.1074/JBC.M114.562470 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.40 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 49941 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2507 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 50.4285 - 3.6686 1.00 3003 175 0.1598 0.1917 REMARK 3 2 3.6686 - 2.9120 1.00 2760 148 0.1593 0.1864 REMARK 3 3 2.9120 - 2.5439 1.00 2746 136 0.1800 0.1911 REMARK 3 4 2.5439 - 2.3113 1.00 2673 150 0.1870 0.2306 REMARK 3 5 2.3113 - 2.1456 1.00 2680 144 0.1845 0.2298 REMARK 3 6 2.1456 - 2.0191 1.00 2613 135 0.1839 0.2117 REMARK 3 7 2.0191 - 1.9180 1.00 2677 135 0.1847 0.2168 REMARK 3 8 1.9180 - 1.8345 1.00 2644 133 0.1931 0.2283 REMARK 3 9 1.8345 - 1.7639 1.00 2603 138 0.1930 0.2154 REMARK 3 10 1.7639 - 1.7030 1.00 2615 148 0.1917 0.2462 REMARK 3 11 1.7030 - 1.6498 1.00 2562 156 0.1982 0.2340 REMARK 3 12 1.6498 - 1.6026 1.00 2645 114 0.1984 0.2353 REMARK 3 13 1.6026 - 1.5604 1.00 2602 129 0.2006 0.2038 REMARK 3 14 1.5604 - 1.5223 1.00 2598 134 0.2082 0.2379 REMARK 3 15 1.5223 - 1.4877 1.00 2595 127 0.2305 0.2462 REMARK 3 16 1.4877 - 1.4561 0.99 2542 136 0.2488 0.2920 REMARK 3 17 1.4561 - 1.4269 0.97 2522 121 0.2612 0.3369 REMARK 3 18 1.4269 - 1.4000 0.92 2354 148 0.3077 0.3234 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.020 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1741 REMARK 3 ANGLE : 1.021 2372 REMARK 3 CHIRALITY : 0.039 260 REMARK 3 PLANARITY : 0.004 309 REMARK 3 DIHEDRAL : 12.271 597 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.5189 29.0289 4.8962 REMARK 3 T TENSOR REMARK 3 T11: 0.0714 T22: 0.0751 REMARK 3 T33: 0.0899 T12: 0.0045 REMARK 3 T13: -0.0011 T23: -0.0212 REMARK 3 L TENSOR REMARK 3 L11: 1.6657 L22: 1.5063 REMARK 3 L33: 0.9733 L12: -0.1142 REMARK 3 L13: -0.2366 L23: -0.2076 REMARK 3 S TENSOR REMARK 3 S11: -0.0563 S12: -0.0519 S13: -0.0305 REMARK 3 S21: 0.0255 S22: 0.0326 S23: -0.0792 REMARK 3 S31: 0.0191 S32: 0.0682 S33: 0.0289 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 65 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.4162 26.7023 5.6160 REMARK 3 T TENSOR REMARK 3 T11: 0.0926 T22: 0.0907 REMARK 3 T33: 0.0897 T12: 0.0079 REMARK 3 T13: 0.0007 T23: -0.0226 REMARK 3 L TENSOR REMARK 3 L11: 2.0215 L22: 1.1579 REMARK 3 L33: 1.3594 L12: -0.4000 REMARK 3 L13: -0.6716 L23: -0.4399 REMARK 3 S TENSOR REMARK 3 S11: -0.0759 S12: -0.1855 S13: -0.1049 REMARK 3 S21: -0.0408 S22: 0.0513 S23: 0.0123 REMARK 3 S31: 0.0522 S32: 0.0416 S33: 0.0264 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 102 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.4134 33.0136 22.8890 REMARK 3 T TENSOR REMARK 3 T11: 0.2674 T22: 0.2264 REMARK 3 T33: 0.1906 T12: 0.0764 REMARK 3 T13: 0.0545 T23: 0.0607 REMARK 3 L TENSOR REMARK 3 L11: 0.3256 L22: 1.4750 REMARK 3 L33: 1.3537 L12: -0.0924 REMARK 3 L13: 0.1282 L23: -0.2549 REMARK 3 S TENSOR REMARK 3 S11: -0.0413 S12: -0.3366 S13: -0.3550 REMARK 3 S21: 0.3686 S22: 0.0639 S23: 0.0894 REMARK 3 S31: -0.1345 S32: -0.2074 S33: -0.0426 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 138 THROUGH 204 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.5026 41.1537 14.2521 REMARK 3 T TENSOR REMARK 3 T11: 0.2349 T22: 0.1801 REMARK 3 T33: 0.1227 T12: 0.1083 REMARK 3 T13: 0.0464 T23: 0.0130 REMARK 3 L TENSOR REMARK 3 L11: 0.5957 L22: 1.5114 REMARK 3 L33: 1.2424 L12: -0.3127 REMARK 3 L13: -0.1232 L23: -0.8028 REMARK 3 S TENSOR REMARK 3 S11: -0.1446 S12: -0.1291 S13: 0.0845 REMARK 3 S21: 0.5215 S22: 0.3747 S23: 0.2986 REMARK 3 S31: -0.4484 S32: -0.3319 S33: 0.2790 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 205 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.7957 31.7023 16.7432 REMARK 3 T TENSOR REMARK 3 T11: 0.1514 T22: 0.2331 REMARK 3 T33: 0.1749 T12: 0.0433 REMARK 3 T13: 0.0149 T23: 0.0652 REMARK 3 L TENSOR REMARK 3 L11: 1.4230 L22: 1.4259 REMARK 3 L33: 0.8818 L12: -0.3906 REMARK 3 L13: -0.1001 L23: -0.6256 REMARK 3 S TENSOR REMARK 3 S11: -0.0765 S12: 0.1603 S13: 0.0483 REMARK 3 S21: 0.0714 S22: 0.4584 S23: 0.5659 REMARK 3 S31: -0.1778 S32: -0.5252 S33: 0.0133 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 221 THROUGH 243 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8262 36.7516 13.3489 REMARK 3 T TENSOR REMARK 3 T11: 0.1604 T22: 0.1523 REMARK 3 T33: 0.1307 T12: 0.0250 REMARK 3 T13: 0.0033 T23: -0.0105 REMARK 3 L TENSOR REMARK 3 L11: 1.2716 L22: 1.5689 REMARK 3 L33: 2.4419 L12: 0.1553 REMARK 3 L13: -0.7710 L23: -1.3090 REMARK 3 S TENSOR REMARK 3 S11: -0.0126 S12: -0.0941 S13: 0.0041 REMARK 3 S21: 0.1989 S22: 0.1722 S23: 0.0754 REMARK 3 S31: -0.1101 S32: -0.1983 S33: -0.0813 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4P49 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200672. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.953697 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.21, XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50126 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 50.396 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 17.70 REMARK 200 R MERGE (I) : 0.12600 REMARK 200 R SYM (I) : 0.12600 REMARK 200 FOR THE DATA SET : 12.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 0.91000 REMARK 200 R SYM FOR SHELL (I) : 0.91000 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.18 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NAOAC PH 4.6, 0.2M NH4-SULFATE, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 100.79167 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 201.58333 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 151.18750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 251.97917 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 50.39583 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 100.79167 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 201.58333 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 251.97917 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 151.18750 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 50.39583 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 406 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 409 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 478 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 104 REMARK 465 SER A 105 REMARK 465 SER A 106 REMARK 465 ARG A 107 REMARK 465 SER A 108 REMARK 465 SER A 109 REMARK 465 GLY A 110 REMARK 465 GLY A 111 REMARK 465 GLY A 112 REMARK 465 GLY A 113 REMARK 465 SER A 114 REMARK 465 SER A 115 REMARK 465 GLY A 116 REMARK 465 GLY A 117 REMARK 465 GLY A 118 REMARK 465 GLY A 119 REMARK 465 SER A 120 REMARK 465 SER A 244 REMARK 465 THR A 245 REMARK 465 SER A 246 REMARK 465 GLY A 247 REMARK 465 GLN A 248 REMARK 465 ALA A 249 REMARK 465 GLY A 250 REMARK 465 GLN A 251 REMARK 465 HIS A 252 REMARK 465 HIS A 253 REMARK 465 HIS A 254 REMARK 465 HIS A 255 REMARK 465 HIS A 256 REMARK 465 HIS A 257 REMARK 465 GLY A 258 REMARK 465 ALA A 259 REMARK 465 TYR A 260 REMARK 465 PRO A 261 REMARK 465 TYR A 262 REMARK 465 ASP A 263 REMARK 465 VAL A 264 REMARK 465 PRO A 265 REMARK 465 ASP A 266 REMARK 465 TYR A 267 REMARK 465 ALA A 268 REMARK 465 SER A 269 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 622 O HOH A 628 1.81 REMARK 500 O HOH A 439 O HOH A 591 1.87 REMARK 500 O HOH A 465 O HOH A 475 1.90 REMARK 500 O HOH A 696 O HOH A 710 1.93 REMARK 500 O HOH A 468 O HOH A 473 1.94 REMARK 500 O HOH A 482 O HOH A 682 1.95 REMARK 500 O HOH A 728 O HOH A 730 1.99 REMARK 500 O HOH A 630 O HOH A 667 2.00 REMARK 500 O HOH A 708 O HOH A 717 2.06 REMARK 500 O HOH A 464 O HOH A 469 2.06 REMARK 500 O HOH A 450 O HOH A 458 2.09 REMARK 500 O HOH A 534 O HOH A 609 2.11 REMARK 500 O HOH A 707 O HOH A 711 2.11 REMARK 500 O HOH A 632 O HOH A 682 2.11 REMARK 500 OE1 GLN A 197 O HOH A 401 2.14 REMARK 500 O HOH A 488 O HOH A 605 2.14 REMARK 500 O HOH A 608 O HOH A 644 2.14 REMARK 500 O HOH A 611 O HOH A 702 2.16 REMARK 500 O HOH A 517 O HOH A 598 2.18 REMARK 500 O HOH A 714 O HOH A 721 2.18 REMARK 500 O HOH A 709 O HOH A 726 2.18 REMARK 500 O HOH A 503 O HOH A 559 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 475 O HOH A 477 8675 1.95 REMARK 500 O HOH A 472 O HOH A 481 8665 2.09 REMARK 500 O HOH A 446 O HOH A 471 8565 2.13 REMARK 500 O HOH A 415 O HOH A 426 8665 2.16 REMARK 500 O HOH A 418 O HOH A 465 8675 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 46 -42.67 70.07 REMARK 500 ASP A 176 -39.64 -134.28 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 582 DISTANCE = 5.91 ANGSTROMS REMARK 525 HOH A 649 DISTANCE = 6.17 ANGSTROMS REMARK 525 HOH A 699 DISTANCE = 7.40 ANGSTROMS REMARK 525 HOH A 701 DISTANCE = 6.08 ANGSTROMS REMARK 525 HOH A 703 DISTANCE = 7.43 ANGSTROMS REMARK 525 HOH A 728 DISTANCE = 10.26 ANGSTROMS REMARK 525 HOH A 730 DISTANCE = 8.70 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ACT A 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4P48 RELATED DB: PDB DBREF 4P49 A 1 269 PDB 4P49 4P49 1 269 SEQRES 1 A 269 ALA LEU THR GLN PRO SER SER VAL SER ALA ASN PRO GLY SEQRES 2 A 269 GLU THR VAL LYS ILE THR CYS SER GLY SER SER GLY SER SEQRES 3 A 269 TYR GLY TRP TYR GLN GLN LYS SER PRO ASP SER ALA PRO SEQRES 4 A 269 VAL THR VAL ILE TYR GLN SER ASN GLN ARG PRO SER ASP SEQRES 5 A 269 ILE PRO SER ARG PHE SER GLY SER LYS SER GLY SER THR SEQRES 6 A 269 GLY THR LEU THR ILE THR GLY VAL GLN ALA GLU ASP GLU SEQRES 7 A 269 ALA VAL TYR TYR CYS GLY GLY TRP GLY SER SER VAL GLY SEQRES 8 A 269 MET PHE GLY ALA GLY THR THR LEU THR VAL LEU GLY GLN SEQRES 9 A 269 SER SER ARG SER SER GLY GLY GLY GLY SER SER GLY GLY SEQRES 10 A 269 GLY GLY SER ALA VAL THR LEU ASP GLU SER GLY GLY GLY SEQRES 11 A 269 LEU GLN THR PRO GLY GLY ALA LEU SER LEU VAL CYS LYS SEQRES 12 A 269 ALA SER GLY PHE THR PHE SER SER TYR ALA MET GLY TRP SEQRES 13 A 269 VAL ARG GLN ALA PRO GLY LYS GLY LEU GLU TRP VAL ALA SEQRES 14 A 269 GLY ILE SER ASP ASP GLY ASP SER TYR ILE SER TYR ALA SEQRES 15 A 269 THR ALA VAL LYS GLY ARG ALA THR ILE SER ARG ASP ASN SEQRES 16 A 269 GLY GLN SER THR VAL ARG LEU GLN LEU ASN ASN LEU ARG SEQRES 17 A 269 ALA GLU ASP THR ALA THR TYR TYR CYS ALA ARG SER HIS SEQRES 18 A 269 CYS SER GLY CYS ARG ASN ALA ALA LEU ILE ASP ALA TRP SEQRES 19 A 269 GLY HIS GLY THR GLU VAL ILE VAL SER SER THR SER GLY SEQRES 20 A 269 GLN ALA GLY GLN HIS HIS HIS HIS HIS HIS GLY ALA TYR SEQRES 21 A 269 PRO TYR ASP VAL PRO ASP TYR ALA SER HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET ACT A 305 4 HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION FORMUL 2 SO4 4(O4 S 2-) FORMUL 6 ACT C2 H3 O2 1- FORMUL 7 HOH *331(H2 O) HELIX 1 AA1 GLN A 74 GLU A 78 5 5 HELIX 2 AA2 THR A 148 TYR A 152 5 5 HELIX 3 AA3 ARG A 208 THR A 212 5 5 SHEET 1 AA1 5 SER A 7 ALA A 10 0 SHEET 2 AA1 5 THR A 97 VAL A 101 1 O THR A 100 N ALA A 10 SHEET 3 AA1 5 ALA A 79 GLY A 87 -1 N ALA A 79 O LEU A 99 SHEET 4 AA1 5 GLY A 28 GLN A 32 -1 N GLN A 32 O VAL A 80 SHEET 5 AA1 5 VAL A 40 ILE A 43 -1 O ILE A 43 N TRP A 29 SHEET 1 AA2 4 SER A 7 ALA A 10 0 SHEET 2 AA2 4 THR A 97 VAL A 101 1 O THR A 100 N ALA A 10 SHEET 3 AA2 4 ALA A 79 GLY A 87 -1 N ALA A 79 O LEU A 99 SHEET 4 AA2 4 VAL A 90 PHE A 93 -1 O MET A 92 N GLY A 85 SHEET 1 AA3 3 THR A 15 SER A 21 0 SHEET 2 AA3 3 THR A 65 THR A 71 -1 O LEU A 68 N ILE A 18 SHEET 3 AA3 3 PHE A 57 SER A 62 -1 N SER A 58 O THR A 69 SHEET 1 AA4 4 THR A 123 SER A 127 0 SHEET 2 AA4 4 LEU A 138 SER A 145 -1 O SER A 145 N THR A 123 SHEET 3 AA4 4 THR A 199 LEU A 204 -1 O VAL A 200 N CYS A 142 SHEET 4 AA4 4 ALA A 189 ASP A 194 -1 N SER A 192 O ARG A 201 SHEET 1 AA5 6 GLY A 130 GLN A 132 0 SHEET 2 AA5 6 THR A 238 VAL A 242 1 O ILE A 241 N GLN A 132 SHEET 3 AA5 6 ALA A 213 SER A 220 -1 N TYR A 215 O THR A 238 SHEET 4 AA5 6 MET A 154 GLN A 159 -1 N VAL A 157 O TYR A 216 SHEET 5 AA5 6 LEU A 165 ILE A 171 -1 O GLU A 166 N ARG A 158 SHEET 6 AA5 6 ILE A 179 TYR A 181 -1 O SER A 180 N GLY A 170 SHEET 1 AA6 4 GLY A 130 GLN A 132 0 SHEET 2 AA6 4 THR A 238 VAL A 242 1 O ILE A 241 N GLN A 132 SHEET 3 AA6 4 ALA A 213 SER A 220 -1 N TYR A 215 O THR A 238 SHEET 4 AA6 4 ILE A 231 TRP A 234 -1 O ASP A 232 N ARG A 219 SSBOND 1 CYS A 20 CYS A 83 1555 1555 2.04 SSBOND 2 CYS A 142 CYS A 217 1555 1555 2.05 SSBOND 3 CYS A 222 CYS A 225 1555 1555 2.03 SITE 1 AC1 10 GLY A 25 SER A 26 GLN A 45 CYS A 222 SITE 2 AC1 10 SER A 223 ASN A 227 SO4 A 304 HOH A 403 SITE 3 AC1 10 HOH A 423 HOH A 432 SITE 1 AC2 4 TYR A 178 ARG A 226 HOH A 408 HOH A 422 SITE 1 AC3 8 TYR A 178 CYS A 225 ARG A 226 ASN A 227 SITE 2 AC3 8 HOH A 406 HOH A 414 HOH A 423 HOH A 425 SITE 1 AC4 5 GLN A 45 SO4 A 301 HOH A 406 HOH A 414 SITE 2 AC4 5 HOH A 430 SITE 1 AC5 3 PRO A 54 SER A 55 HOH A 452 CRYST1 52.459 52.459 302.375 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019062 0.011006 0.000000 0.00000 SCALE2 0.000000 0.022011 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003307 0.00000