data_4P4V # _entry.id 4P4V # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4P4V pdb_00004p4v 10.2210/pdb4p4v/pdb WWPDB D_1000200658 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-05-06 2 'Structure model' 1 1 2015-05-13 3 'Structure model' 1 2 2015-06-03 4 'Structure model' 1 3 2017-09-27 5 'Structure model' 1 4 2019-11-27 6 'Structure model' 1 5 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' Advisory 4 4 'Structure model' 'Author supporting evidence' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Source and taxonomy' 8 5 'Structure model' 'Author supporting evidence' 9 6 'Structure model' 'Data collection' 10 6 'Structure model' 'Database references' 11 6 'Structure model' 'Derived calculations' 12 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_audit_support 2 4 'Structure model' pdbx_database_status 3 4 'Structure model' pdbx_entity_src_syn 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' pdbx_validate_polymer_linkage 6 4 'Structure model' pdbx_validate_symm_contact 7 5 'Structure model' pdbx_audit_support 8 6 'Structure model' chem_comp_atom 9 6 'Structure model' chem_comp_bond 10 6 'Structure model' database_2 11 6 'Structure model' refine_hist 12 6 'Structure model' struct_conn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_pdbx_database_status.pdb_format_compatible' 3 4 'Structure model' '_pdbx_entity_src_syn.pdbx_alt_source_flag' 4 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 5 'Structure model' '_pdbx_audit_support.funding_organization' 6 6 'Structure model' '_database_2.pdbx_DOI' 7 6 'Structure model' '_database_2.pdbx_database_accession' 8 6 'Structure model' '_struct_conn.pdbx_dist_value' 9 6 'Structure model' '_struct_conn.pdbx_ptnr2_label_alt_id' 10 6 'Structure model' '_struct_conn.ptnr1_label_atom_id' 11 6 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 12 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 13 6 'Structure model' '_struct_conn.ptnr2_label_atom_id' 14 6 'Structure model' '_struct_conn.ptnr2_label_comp_id' 15 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 4P4V _pdbx_database_status.recvd_initial_deposition_date 2014-03-13 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs . _pdbx_database_status.methods_development_category . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4P4W PDB . unspecified 4P4X PDB . unspecified 4P4Y PDB . unspecified 4P4Z PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Spencer, R.K.' 1 'Nowick, J.S.' 2 # _citation.abstract . _citation.abstract_id_CAS . _citation.book_id_ISBN . _citation.book_publisher ? _citation.book_publisher_city . _citation.book_title . _citation.coordinate_linkage . _citation.country US _citation.database_id_Medline . _citation.details . _citation.id primary _citation.journal_abbrev J.Am.Chem.Soc. _citation.journal_id_ASTM JACSAT _citation.journal_id_CSD ? _citation.journal_id_ISSN 1520-5126 _citation.journal_full . _citation.journal_issue . _citation.journal_volume 137 _citation.language . _citation.page_first 6304 _citation.page_last 6311 _citation.title 'X-ray Crystallographic Structures of Oligomers of Peptides Derived from beta 2-Microglobulin.' _citation.year 2015 _citation.database_id_CSD . _citation.pdbx_database_id_DOI 10.1021/jacs.5b01673 _citation.pdbx_database_id_PubMed 25915729 _citation.unpublished_flag . # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Spencer, R.K.' 1 ? primary 'Kreutzer, A.G.' 2 ? primary 'Salveson, P.J.' 3 ? primary 'Li, H.' 4 ? primary 'Nowick, J.S.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'CYCLIC HEXADECAPEPTIDE (ORN)YLL(PHI)YTE(ORN)KVA(MAA)AVK' 1986.140 3 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 3 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 4 water nat water 18.015 15 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code '(ORN)YLL(PHI)YTE(ORN)KVA(MAA)AVK' _entity_poly.pdbx_seq_one_letter_code_can AYLLFYTEAKVAAAVK _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 'CHLORIDE ION' CL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ORN n 1 2 TYR n 1 3 LEU n 1 4 LEU n 1 5 PHI n 1 6 TYR n 1 7 THR n 1 8 GLU n 1 9 ORN n 1 10 LYS n 1 11 VAL n 1 12 ALA n 1 13 MAA n 1 14 ALA n 1 15 VAL n 1 16 LYS n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 16 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details 'This sequence occurs naturally in humans.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HOH non-polymer . WATER ? 'H2 O' 18.015 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAA 'L-peptide linking' n N-methyl-L-alanine ? 'C4 H9 N O2' 103.120 ORN 'L-peptide linking' n L-ornithine ? 'C5 H12 N2 O2' 132.161 PHI 'L-peptide linking' n IODO-PHENYLALANINE ? 'C9 H10 I N O2' 291.086 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ORN 1 1 1 ORN ORN A . n A 1 2 TYR 2 2 2 TYR TYR A . n A 1 3 LEU 3 3 3 LEU LEU A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 PHI 5 5 5 PHI PHI A . n A 1 6 TYR 6 6 6 TYR TYR A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 ORN 9 9 9 ORN ORN A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 VAL 11 11 11 VAL VAL A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 MAA 13 13 13 MAA MAA A . n A 1 14 ALA 14 14 14 ALA ALA A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 LYS 16 16 16 LYS LYS A . n B 1 1 ORN 1 1 1 ORN ORN B . n B 1 2 TYR 2 2 2 TYR TYR B . n B 1 3 LEU 3 3 3 LEU LEU B . n B 1 4 LEU 4 4 4 LEU LEU B . n B 1 5 PHI 5 5 5 PHI PHI B . n B 1 6 TYR 6 6 6 TYR TYR B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 GLU 8 8 8 GLU GLU B . n B 1 9 ORN 9 9 9 ORN ORN B . n B 1 10 LYS 10 10 10 LYS LYS B . n B 1 11 VAL 11 11 11 VAL VAL B . n B 1 12 ALA 12 12 12 ALA ALA B . n B 1 13 MAA 13 13 13 MAA MAA B . n B 1 14 ALA 14 14 14 ALA ALA B . n B 1 15 VAL 15 15 15 VAL VAL B . n B 1 16 LYS 16 16 16 LYS LYS B . n C 1 1 ORN 1 1 1 ORN ORN C . n C 1 2 TYR 2 2 2 TYR TYR C . n C 1 3 LEU 3 3 3 LEU LEU C . n C 1 4 LEU 4 4 4 LEU LEU C . n C 1 5 PHI 5 5 5 PHI PHI C . n C 1 6 TYR 6 6 6 TYR TYR C . n C 1 7 THR 7 7 7 THR THR C . n C 1 8 GLU 8 8 8 GLU GLU C . n C 1 9 ORN 9 9 9 ORN ORN C . n C 1 10 LYS 10 10 10 LYS LYS C . n C 1 11 VAL 11 11 11 VAL VAL C . n C 1 12 ALA 12 12 12 ALA ALA C . n C 1 13 MAA 13 13 13 MAA MAA C . n C 1 14 ALA 14 14 14 ALA ALA C . n C 1 15 VAL 15 15 15 VAL VAL C . n C 1 16 LYS 16 16 16 LYS LYS C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 SO4 1 101 2 SO4 SO4 A . E 3 CL 1 102 2 CL CL A . F 2 SO4 1 101 3 SO4 SO4 B . G 3 CL 1 102 3 CL CL B . H 2 SO4 1 101 1 SO4 SO4 C . I 3 CL 1 102 1 CL CL C . J 4 HOH 1 201 3 HOH HOH A . J 4 HOH 2 202 9 HOH HOH A . J 4 HOH 3 203 16 HOH HOH A . J 4 HOH 4 204 15 HOH HOH A . J 4 HOH 5 205 7 HOH HOH A . K 4 HOH 1 201 2 HOH HOH B . K 4 HOH 2 202 1 HOH HOH B . K 4 HOH 3 203 11 HOH HOH B . K 4 HOH 4 204 12 HOH HOH B . L 4 HOH 1 201 8 HOH HOH C . L 4 HOH 2 202 4 HOH HOH C . L 4 HOH 3 203 10 HOH HOH C . L 4 HOH 4 204 13 HOH HOH C . L 4 HOH 5 205 5 HOH HOH C . L 4 HOH 6 206 6 HOH HOH C . # _software.citation_id ? _software.classification refinement _software.compiler_name . _software.compiler_version . _software.contact_author . _software.contact_author_email . _software.date . _software.description . _software.dependencies . _software.hardware . _software.language . _software.location . _software.mods . _software.name PHENIX _software.os . _software.os_version . _software.type . _software.version '(phenix.refine: 1.8.4_1496)' _software.pdbx_ordinal 1 # _cell.entry_id 4P4V _cell.length_a 62.030 _cell.length_b 62.030 _cell.length_c 44.676 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 24 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P4V _symmetry.cell_setting . _symmetry.Int_Tables_number 93 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 42 2 2' _symmetry.pdbx_full_space_group_name_H-M . # _exptl.absorpt_coefficient_mu . _exptl.absorpt_correction_T_max . _exptl.absorpt_correction_T_min . _exptl.absorpt_correction_type . _exptl.absorpt_process_details . _exptl.entry_id 4P4V _exptl.crystals_number 1 _exptl.details . _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details . # _exptl_crystal.colour . _exptl_crystal.density_diffrn . _exptl_crystal.density_Matthews 3.61 _exptl_crystal.density_method . _exptl_crystal.density_percent_sol 65.89 _exptl_crystal.description . _exptl_crystal.F_000 . _exptl_crystal.id 1 _exptl_crystal.preparation . _exptl_crystal.size_max . _exptl_crystal.size_mid . _exptl_crystal.size_min . _exptl_crystal.size_rad . _exptl_crystal.colour_lustre . _exptl_crystal.colour_modifier . _exptl_crystal.colour_primary . _exptl_crystal.density_meas . _exptl_crystal.density_meas_esd . _exptl_crystal.density_meas_gt . _exptl_crystal.density_meas_lt . _exptl_crystal.density_meas_temp . _exptl_crystal.density_meas_temp_esd . _exptl_crystal.density_meas_temp_gt . _exptl_crystal.density_meas_temp_lt . _exptl_crystal.pdbx_crystal_image_url . _exptl_crystal.pdbx_crystal_image_format . _exptl_crystal.pdbx_mosaicity . _exptl_crystal.pdbx_mosaicity_esd . # _exptl_crystal_grow.apparatus . _exptl_crystal_grow.atmosphere . _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details . _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref . _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure . _exptl_crystal_grow.pressure_esd . _exptl_crystal_grow.seeding . _exptl_crystal_grow.seeding_ref . _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details . _exptl_crystal_grow.temp_esd . _exptl_crystal_grow.time . _exptl_crystal_grow.pdbx_details '0.1 M Tris, pH 8.0; 0.3 M lithium sulfate; 45% PEG 400' _exptl_crystal_grow.pdbx_pH_range 7.0-9.0 # _diffrn.ambient_environment . _diffrn.ambient_temp 100 _diffrn.ambient_temp_details . _diffrn.ambient_temp_esd . _diffrn.crystal_id 1 _diffrn.crystal_support . _diffrn.crystal_treatment . _diffrn.details . _diffrn.id 1 _diffrn.ambient_pressure . _diffrn.ambient_pressure_esd . _diffrn.ambient_pressure_gt . _diffrn.ambient_pressure_lt . _diffrn.ambient_temp_gt . _diffrn.ambient_temp_lt . # _diffrn_detector.details . _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.area_resol_mean . _diffrn_detector.dtime . _diffrn_detector.pdbx_frames_total . _diffrn_detector.pdbx_collection_time_total . _diffrn_detector.pdbx_collection_date 2013-10-15 # _diffrn_radiation.collimation . _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge . _diffrn_radiation.inhomogeneity . _diffrn_radiation.monochromator 'Double crystal, Si(111)' _diffrn_radiation.polarisn_norm . _diffrn_radiation.polarisn_ratio . _diffrn_radiation.probe . _diffrn_radiation.type . _diffrn_radiation.xray_symbol . _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list . _diffrn_radiation.pdbx_wavelength . _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer . _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current . _diffrn_source.details . _diffrn_source.diffrn_id 1 _diffrn_source.power . _diffrn_source.size . _diffrn_source.source SYNCHROTRON _diffrn_source.target . _diffrn_source.type 'ALS BEAMLINE 8.2.1' _diffrn_source.voltage . _diffrn_source.take-off_angle . _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_wavelength . _diffrn_source.pdbx_synchrotron_beamline 8.2.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate . _reflns.entry_id 4P4V _reflns.data_reduction_details . _reflns.data_reduction_method . _reflns.d_resolution_high 1.97 _reflns.d_resolution_low 31.3 _reflns.details . _reflns.limit_h_max . _reflns.limit_h_min . _reflns.limit_k_max . _reflns.limit_k_min . _reflns.limit_l_max . _reflns.limit_l_min . _reflns.number_all ? _reflns.number_obs 6556 _reflns.observed_criterion . _reflns.observed_criterion_F_max . _reflns.observed_criterion_F_min . _reflns.observed_criterion_I_max . _reflns.observed_criterion_I_min . _reflns.observed_criterion_sigma_F . _reflns.observed_criterion_sigma_I . _reflns.percent_possible_obs 99.88 _reflns.R_free_details . _reflns.Rmerge_F_all . _reflns.Rmerge_F_obs . _reflns.Friedel_coverage . _reflns.number_gt . _reflns.threshold_expression . _reflns.pdbx_redundancy 2.0 _reflns.pdbx_Rmerge_I_obs 0.03705 _reflns.pdbx_Rmerge_I_all . _reflns.pdbx_Rsym_value . _reflns.pdbx_netI_over_av_sigmaI . _reflns.pdbx_netI_over_sigmaI 13.24 _reflns.pdbx_res_netI_over_av_sigmaI_2 . _reflns.pdbx_res_netI_over_sigmaI_2 . _reflns.pdbx_chi_squared . _reflns.pdbx_scaling_rejects . _reflns.pdbx_d_res_high_opt . _reflns.pdbx_d_res_low_opt . _reflns.pdbx_d_res_opt_method . _reflns.phase_calculation_details . _reflns.pdbx_Rrim_I_all . _reflns.pdbx_Rpim_I_all . _reflns.pdbx_d_opt . _reflns.pdbx_number_measured_all . _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _reflns_shell.d_res_high 1.97 _reflns_shell.d_res_low 2.04 _reflns_shell.meanI_over_sigI_all . _reflns_shell.meanI_over_sigI_obs 2.0 _reflns_shell.number_measured_all . _reflns_shell.number_measured_obs . _reflns_shell.number_possible . _reflns_shell.number_unique_all . _reflns_shell.number_unique_obs . _reflns_shell.percent_possible_all 99.20 _reflns_shell.percent_possible_obs . _reflns_shell.Rmerge_F_all . _reflns_shell.Rmerge_F_obs . _reflns_shell.Rmerge_I_all . _reflns_shell.Rmerge_I_obs 0.3766 _reflns_shell.meanI_over_sigI_gt . _reflns_shell.meanI_over_uI_all . _reflns_shell.meanI_over_uI_gt . _reflns_shell.number_measured_gt . _reflns_shell.number_unique_gt . _reflns_shell.percent_possible_gt . _reflns_shell.Rmerge_F_gt . _reflns_shell.Rmerge_I_gt . _reflns_shell.pdbx_redundancy 2.0 _reflns_shell.pdbx_Rsym_value . _reflns_shell.pdbx_chi_squared . _reflns_shell.pdbx_netI_over_sigmaI_all . _reflns_shell.pdbx_netI_over_sigmaI_obs . _reflns_shell.pdbx_Rrim_I_all . _reflns_shell.pdbx_Rpim_I_all . _reflns_shell.pdbx_rejects . _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.aniso_B[1][1] . _refine.aniso_B[1][2] . _refine.aniso_B[1][3] . _refine.aniso_B[2][2] . _refine.aniso_B[2][3] . _refine.aniso_B[3][3] . _refine.B_iso_max . _refine.B_iso_mean . _refine.B_iso_min . _refine.correlation_coeff_Fo_to_Fc . _refine.correlation_coeff_Fo_to_Fc_free . _refine.details . _refine.diff_density_max . _refine.diff_density_max_esd . _refine.diff_density_min . _refine.diff_density_min_esd . _refine.diff_density_rms . _refine.diff_density_rms_esd . _refine.entry_id 4P4V _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details . _refine.ls_abs_structure_Flack . _refine.ls_abs_structure_Flack_esd . _refine.ls_abs_structure_Rogers . _refine.ls_abs_structure_Rogers_esd . _refine.ls_d_res_high 1.97 _refine.ls_d_res_low 31.299 _refine.ls_extinction_coef . _refine.ls_extinction_coef_esd . _refine.ls_extinction_expression . _refine.ls_extinction_method . _refine.ls_goodness_of_fit_all . _refine.ls_goodness_of_fit_all_esd . _refine.ls_goodness_of_fit_obs . _refine.ls_goodness_of_fit_obs_esd . _refine.ls_hydrogen_treatment . _refine.ls_matrix_type . _refine.ls_number_constraints . _refine.ls_number_parameters . _refine.ls_number_reflns_all . _refine.ls_number_reflns_obs 11748 _refine.ls_number_reflns_R_free 1192 _refine.ls_number_reflns_R_work . _refine.ls_number_restraints . _refine.ls_percent_reflns_obs 99.65 _refine.ls_percent_reflns_R_free 10.15 _refine.ls_R_factor_all . _refine.ls_R_factor_obs 0.1975 _refine.ls_R_factor_R_free 0.2218 _refine.ls_R_factor_R_free_error . _refine.ls_R_factor_R_free_error_details . _refine.ls_R_factor_R_work 0.1946 _refine.ls_R_Fsqd_factor_obs . _refine.ls_R_I_factor_obs . _refine.ls_redundancy_reflns_all . _refine.ls_redundancy_reflns_obs . _refine.ls_restrained_S_all . _refine.ls_restrained_S_obs . _refine.ls_shift_over_esd_max . _refine.ls_shift_over_esd_mean . _refine.ls_structure_factor_coef . _refine.ls_weighting_details . _refine.ls_weighting_scheme . _refine.ls_wR_factor_all . _refine.ls_wR_factor_obs . _refine.ls_wR_factor_R_free . _refine.ls_wR_factor_R_work . _refine.occupancy_max . _refine.occupancy_min . _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol . _refine.solvent_model_param_ksol . _refine.ls_R_factor_gt . _refine.ls_goodness_of_fit_gt . _refine.ls_goodness_of_fit_ref . _refine.ls_shift_over_su_max . _refine.ls_shift_over_su_max_lt . _refine.ls_shift_over_su_mean . _refine.ls_shift_over_su_mean_lt . _refine.pdbx_ls_sigma_I . _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_ls_sigma_Fsqd . _refine.pdbx_data_cutoff_high_absF . _refine.pdbx_data_cutoff_high_rms_absF . _refine.pdbx_data_cutoff_low_absF . _refine.pdbx_isotropic_thermal_model . _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct . _refine.pdbx_starting_model . _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details . _refine.pdbx_stereochem_target_val_spec_case . _refine.pdbx_overall_ESU_R . _refine.pdbx_overall_ESU_R_Free . _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii . _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R . _refine.pdbx_density_correlation . _refine.pdbx_pd_number_of_powder_patterns . _refine.pdbx_pd_number_of_points . _refine.pdbx_pd_meas_number_of_points . _refine.pdbx_pd_proc_ls_prof_R_factor . _refine.pdbx_pd_proc_ls_prof_wR_factor . _refine.pdbx_pd_Marquardt_correlation_coeff . _refine.pdbx_pd_Fsqrd_R_factor . _refine.pdbx_pd_ls_matrix_band_width . _refine.pdbx_overall_phase_error 24.13 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI . _refine.pdbx_overall_SU_R_free_Blow_DPI . _refine.pdbx_overall_SU_R_Blow_DPI . _refine.pdbx_TLS_residual_ADP_flag . _refine.pdbx_diffrn_id 1 _refine.overall_SU_B . _refine.overall_SU_ML 0.25 _refine.overall_SU_R_Cruickshank_DPI . _refine.overall_SU_R_free . _refine.overall_FOM_free_R_set . _refine.overall_FOM_work_R_set . # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 396 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 18 _refine_hist.number_atoms_solvent 15 _refine_hist.number_atoms_total 429 _refine_hist.d_res_high 1.97 _refine_hist.d_res_low 31.299 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' . 0.008 . 472 . f_bond_d . . 'X-RAY DIFFRACTION' . 1.276 . 642 . f_angle_d . . 'X-RAY DIFFRACTION' . 30.442 . 221 . f_dihedral_angle_d . . 'X-RAY DIFFRACTION' . 0.058 . 71 . f_chiral_restr . . 'X-RAY DIFFRACTION' . 0.005 . 72 . f_plane_restr . . # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error 'X-RAY DIFFRACTION' 1.97 2.0501 . . 133 1176 99.00 . . . 0.3237 . 0.2951 . . . . . . . . 'X-RAY DIFFRACTION' 2.0501 2.1434 . . 130 1175 100.00 . . . 0.3670 . 0.3092 . . . . . . . . 'X-RAY DIFFRACTION' 2.1434 2.2563 . . 137 1159 100.00 . . . 0.2801 . 0.2618 . . . . . . . . 'X-RAY DIFFRACTION' 2.2563 2.3977 . . 126 1188 100.00 . . . 0.2092 . 0.2043 . . . . . . . . 'X-RAY DIFFRACTION' 2.3977 2.5827 . . 133 1177 100.00 . . . 0.2117 . 0.2080 . . . . . . . . 'X-RAY DIFFRACTION' 2.5827 2.8425 . . 139 1158 100.00 . . . 0.2534 . 0.2104 . . . . . . . . 'X-RAY DIFFRACTION' 2.8425 3.2534 . . 129 1173 100.00 . . . 0.1855 . 0.1659 . . . . . . . . 'X-RAY DIFFRACTION' 3.2534 4.0975 . . 131 1178 99.00 . . . 0.1886 . 0.1796 . . . . . . . . 'X-RAY DIFFRACTION' 4.0975 31.3028 . . 134 1172 99.00 . . . 0.2256 . 0.1744 . . . . . . . . # _struct.entry_id 4P4V _struct.title 'Hexamer formed by a macrocyclic peptide derived from beta-2-microglobulin (63-69) - (ORN)YLL(PHI)YTE(ORN)KVA(MAA)AVK' _struct.pdbx_model_details . _struct.pdbx_formula_weight . _struct.pdbx_formula_weight_method . _struct.pdbx_model_type_details . _struct.pdbx_CASP_flag . # _struct_keywords.entry_id 4P4V _struct_keywords.text 'Hexamer, beta-2 microglobulin, amyloid, iodophenylalanine, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 2 ? I N N 3 ? J N N 4 ? K N N 4 ? L N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4P4V _struct_ref.pdbx_db_accession 4P4V _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4P4V A 1 ? 16 ? 4P4V 1 ? 16 ? 1 16 2 1 4P4V B 1 ? 16 ? 4P4V 1 ? 16 ? 1 16 3 1 4P4V C 1 ? 16 ? 4P4V 1 ? 16 ? 1 16 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6900 ? 1 MORE -135 ? 1 'SSA (A^2)' 6520 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_455 -x-1,y,-z -1.0000000000 0.0000000000 0.0000000000 -62.0300000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ORN 1 C ? ? ? 1_555 A TYR 2 N A ? A ORN 1 A TYR 2 1_555 ? ? ? ? ? ? ? 1.366 ? ? covale2 covale both ? A ORN 1 C ? ? ? 1_555 A TYR 2 N B ? A ORN 1 A TYR 2 1_555 ? ? ? ? ? ? ? 1.374 ? ? covale3 covale both ? A ORN 1 NE ? ? ? 1_555 A LYS 16 C ? ? A ORN 1 A LYS 16 1_555 ? ? ? ? ? ? ? 1.377 ? ? covale4 covale both ? A LEU 4 C A ? ? 1_555 A PHI 5 N ? ? A LEU 4 A PHI 5 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A LEU 4 C B ? ? 1_555 A PHI 5 N ? ? A LEU 4 A PHI 5 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? A PHI 5 C ? ? ? 1_555 A TYR 6 N ? ? A PHI 5 A TYR 6 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale7 covale both ? A GLU 8 C ? ? ? 1_555 A ORN 9 NE ? ? A GLU 8 A ORN 9 1_555 ? ? ? ? ? ? ? 1.377 ? ? covale8 covale both ? A ORN 9 C ? ? ? 1_555 A LYS 10 N ? ? A ORN 9 A LYS 10 1_555 ? ? ? ? ? ? ? 1.372 ? ? covale9 covale both ? A ALA 12 C ? ? ? 1_555 A MAA 13 N ? ? A ALA 12 A MAA 13 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? A MAA 13 C ? ? ? 1_555 A ALA 14 N ? ? A MAA 13 A ALA 14 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale11 covale both ? B ORN 1 C ? ? ? 1_555 B TYR 2 N A ? B ORN 1 B TYR 2 1_555 ? ? ? ? ? ? ? 1.375 ? ? covale12 covale both ? B ORN 1 C ? ? ? 1_555 B TYR 2 N B ? B ORN 1 B TYR 2 1_555 ? ? ? ? ? ? ? 1.370 ? ? covale13 covale both ? B ORN 1 NE ? ? ? 1_555 B LYS 16 C ? ? B ORN 1 B LYS 16 1_555 ? ? ? ? ? ? ? 1.375 ? ? covale14 covale both ? B LEU 4 C A ? ? 1_555 B PHI 5 N ? ? B LEU 4 B PHI 5 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale15 covale both ? B LEU 4 C B ? ? 1_555 B PHI 5 N ? ? B LEU 4 B PHI 5 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale16 covale both ? B PHI 5 C ? ? ? 1_555 B TYR 6 N ? ? B PHI 5 B TYR 6 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale17 covale both ? B GLU 8 C ? ? ? 1_555 B ORN 9 NE ? ? B GLU 8 B ORN 9 1_555 ? ? ? ? ? ? ? 1.376 ? ? covale18 covale both ? B ORN 9 C ? ? ? 1_555 B LYS 10 N ? ? B ORN 9 B LYS 10 1_555 ? ? ? ? ? ? ? 1.375 ? ? covale19 covale both ? B ALA 12 C ? ? ? 1_555 B MAA 13 N ? ? B ALA 12 B MAA 13 1_555 ? ? ? ? ? ? ? 1.332 ? ? covale20 covale both ? B MAA 13 C ? ? ? 1_555 B ALA 14 N ? ? B MAA 13 B ALA 14 1_555 ? ? ? ? ? ? ? 1.326 ? ? covale21 covale both ? C ORN 1 C ? ? ? 1_555 C TYR 2 N ? ? C ORN 1 C TYR 2 1_555 ? ? ? ? ? ? ? 1.370 ? ? covale22 covale both ? C ORN 1 NE ? ? ? 1_555 C LYS 16 C ? ? C ORN 1 C LYS 16 1_555 ? ? ? ? ? ? ? 1.380 ? ? covale23 covale both ? C LEU 4 C A ? ? 1_555 C PHI 5 N ? ? C LEU 4 C PHI 5 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale24 covale both ? C LEU 4 C B ? ? 1_555 C PHI 5 N ? ? C LEU 4 C PHI 5 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale25 covale both ? C PHI 5 C ? ? ? 1_555 C TYR 6 N ? ? C PHI 5 C TYR 6 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale26 covale both ? C GLU 8 C ? ? ? 1_555 C ORN 9 NE ? ? C GLU 8 C ORN 9 1_555 ? ? ? ? ? ? ? 1.375 ? ? covale27 covale both ? C ORN 9 C ? ? ? 1_555 C LYS 10 N ? ? C ORN 9 C LYS 10 1_555 ? ? ? ? ? ? ? 1.372 ? ? covale28 covale both ? C ALA 12 C ? ? ? 1_555 C MAA 13 N ? ? C ALA 12 C MAA 13 1_555 ? ? ? ? ? ? ? 1.336 ? ? covale29 covale both ? C MAA 13 C ? ? ? 1_555 C ALA 14 N ? ? C MAA 13 C ALA 14 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 4 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ALA A 12 ? LYS A 16 ? ALA A 12 LYS A 16 AA1 2 TYR A 2 ? THR A 7 ? TYR A 2 THR A 7 AA1 3 TYR B 2 ? THR B 7 ? TYR B 2 THR B 7 AA1 4 ALA B 12 ? LYS B 16 ? ALA B 12 LYS B 16 AA2 1 TYR C 2 ? TYR C 6 ? TYR C 2 TYR C 6 AA2 2 ALA C 12 ? LYS C 16 ? ALA C 12 LYS C 16 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O ALA A 12 ? O ALA A 12 N TYR A 6 ? N TYR A 6 AA1 2 3 N LEU A 3 ? N LEU A 3 O THR B 7 ? O THR B 7 AA1 3 4 N LEU B 4 ? N LEU B 4 O ALA B 14 ? O ALA B 14 AA2 1 2 N LEU C 4 ? N LEU C 4 O ALA C 14 ? O ALA C 14 # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' . refined -23.7914 -13.6265 5.1765 0.3108 . 0.0350 . 0.0452 . 0.3045 . -0.0053 . 0.3271 . 5.4012 . -1.1089 . 1.2899 . 9.4804 . -6.4815 . 4.4940 . 0.0930 . 0.0358 . -0.1207 . -0.4633 . -0.0877 . -0.1295 . 0.4222 . 0.1154 . -0.0401 . 2 'X-RAY DIFFRACTION' . refined -29.9847 -9.0652 6.3802 0.3410 . 0.0414 . -0.0060 . 0.2591 . -0.0039 . 0.3986 . 5.1655 . 5.3246 . -3.0652 . 5.5785 . -3.7132 . 7.0760 . 0.0813 . -0.4176 . 0.2814 . -0.1711 . 0.0054 . 0.4901 . -0.4523 . -0.2566 . -0.1309 . 3 'X-RAY DIFFRACTION' . refined -32.3275 -23.1906 3.8873 0.3499 . -0.0091 . 0.0391 . 0.3914 . -0.0513 . 0.2298 . 3.3849 . -5.4089 . 3.0726 . 9.2428 . -5.1302 . 3.0405 . -0.0961 . -0.0775 . 0.3167 . 0.4238 . -0.0902 . 0.0492 . -0.1557 . -0.4616 . 0.0568 . # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 . . . . . . . . . ;chain 'A' and (resid 1 through 16 ) ; 2 'X-RAY DIFFRACTION' 2 . . . . . . . . . ;chain 'B' and (resid 1 through 16 ) ; 3 'X-RAY DIFFRACTION' 3 . . . . . . . . . ;chain 'C' and (resid 1 through 16 ) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 CL CL CL N N 14 GLU N N N N 15 GLU CA C N S 16 GLU C C N N 17 GLU O O N N 18 GLU CB C N N 19 GLU CG C N N 20 GLU CD C N N 21 GLU OE1 O N N 22 GLU OE2 O N N 23 GLU OXT O N N 24 GLU H H N N 25 GLU H2 H N N 26 GLU HA H N N 27 GLU HB2 H N N 28 GLU HB3 H N N 29 GLU HG2 H N N 30 GLU HG3 H N N 31 GLU HE2 H N N 32 GLU HXT H N N 33 HOH O O N N 34 HOH H1 H N N 35 HOH H2 H N N 36 LEU N N N N 37 LEU CA C N S 38 LEU C C N N 39 LEU O O N N 40 LEU CB C N N 41 LEU CG C N N 42 LEU CD1 C N N 43 LEU CD2 C N N 44 LEU OXT O N N 45 LEU H H N N 46 LEU H2 H N N 47 LEU HA H N N 48 LEU HB2 H N N 49 LEU HB3 H N N 50 LEU HG H N N 51 LEU HD11 H N N 52 LEU HD12 H N N 53 LEU HD13 H N N 54 LEU HD21 H N N 55 LEU HD22 H N N 56 LEU HD23 H N N 57 LEU HXT H N N 58 LYS N N N N 59 LYS CA C N S 60 LYS C C N N 61 LYS O O N N 62 LYS CB C N N 63 LYS CG C N N 64 LYS CD C N N 65 LYS CE C N N 66 LYS NZ N N N 67 LYS OXT O N N 68 LYS H H N N 69 LYS H2 H N N 70 LYS HA H N N 71 LYS HB2 H N N 72 LYS HB3 H N N 73 LYS HG2 H N N 74 LYS HG3 H N N 75 LYS HD2 H N N 76 LYS HD3 H N N 77 LYS HE2 H N N 78 LYS HE3 H N N 79 LYS HZ1 H N N 80 LYS HZ2 H N N 81 LYS HZ3 H N N 82 LYS HXT H N N 83 MAA N N N N 84 MAA CM C N N 85 MAA CA C N S 86 MAA CB C N N 87 MAA C C N N 88 MAA O O N N 89 MAA OXT O N N 90 MAA H H N N 91 MAA HM1 H N N 92 MAA HM2 H N N 93 MAA HM3 H N N 94 MAA HA H N N 95 MAA HB1 H N N 96 MAA HB2 H N N 97 MAA HB3 H N N 98 MAA HXT H N N 99 ORN N N N N 100 ORN CA C N S 101 ORN CB C N N 102 ORN CG C N N 103 ORN CD C N N 104 ORN NE N N N 105 ORN C C N N 106 ORN O O N N 107 ORN OXT O N N 108 ORN H H N N 109 ORN H2 H N N 110 ORN HA H N N 111 ORN HB2 H N N 112 ORN HB3 H N N 113 ORN HG2 H N N 114 ORN HG3 H N N 115 ORN HD2 H N N 116 ORN HD3 H N N 117 ORN HE1 H N N 118 ORN HE2 H N N 119 ORN HXT H N N 120 PHI N N N N 121 PHI CA C N S 122 PHI CB C N N 123 PHI CG C Y N 124 PHI CD1 C Y N 125 PHI CD2 C Y N 126 PHI CE1 C Y N 127 PHI CE2 C Y N 128 PHI CZ C Y N 129 PHI I I N N 130 PHI C C N N 131 PHI O O N N 132 PHI OXT O N N 133 PHI H H N N 134 PHI H2 H N N 135 PHI HA H N N 136 PHI HB2 H N N 137 PHI HB3 H N N 138 PHI HD1 H N N 139 PHI HD2 H N N 140 PHI HE1 H N N 141 PHI HE2 H N N 142 PHI HXT H N N 143 SO4 S S N N 144 SO4 O1 O N N 145 SO4 O2 O N N 146 SO4 O3 O N N 147 SO4 O4 O N N 148 THR N N N N 149 THR CA C N S 150 THR C C N N 151 THR O O N N 152 THR CB C N R 153 THR OG1 O N N 154 THR CG2 C N N 155 THR OXT O N N 156 THR H H N N 157 THR H2 H N N 158 THR HA H N N 159 THR HB H N N 160 THR HG1 H N N 161 THR HG21 H N N 162 THR HG22 H N N 163 THR HG23 H N N 164 THR HXT H N N 165 TYR N N N N 166 TYR CA C N S 167 TYR C C N N 168 TYR O O N N 169 TYR CB C N N 170 TYR CG C Y N 171 TYR CD1 C Y N 172 TYR CD2 C Y N 173 TYR CE1 C Y N 174 TYR CE2 C Y N 175 TYR CZ C Y N 176 TYR OH O N N 177 TYR OXT O N N 178 TYR H H N N 179 TYR H2 H N N 180 TYR HA H N N 181 TYR HB2 H N N 182 TYR HB3 H N N 183 TYR HD1 H N N 184 TYR HD2 H N N 185 TYR HE1 H N N 186 TYR HE2 H N N 187 TYR HH H N N 188 TYR HXT H N N 189 VAL N N N N 190 VAL CA C N S 191 VAL C C N N 192 VAL O O N N 193 VAL CB C N N 194 VAL CG1 C N N 195 VAL CG2 C N N 196 VAL OXT O N N 197 VAL H H N N 198 VAL H2 H N N 199 VAL HA H N N 200 VAL HB H N N 201 VAL HG11 H N N 202 VAL HG12 H N N 203 VAL HG13 H N N 204 VAL HG21 H N N 205 VAL HG22 H N N 206 VAL HG23 H N N 207 VAL HXT H N N 208 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 GLU N CA sing N N 13 GLU N H sing N N 14 GLU N H2 sing N N 15 GLU CA C sing N N 16 GLU CA CB sing N N 17 GLU CA HA sing N N 18 GLU C O doub N N 19 GLU C OXT sing N N 20 GLU CB CG sing N N 21 GLU CB HB2 sing N N 22 GLU CB HB3 sing N N 23 GLU CG CD sing N N 24 GLU CG HG2 sing N N 25 GLU CG HG3 sing N N 26 GLU CD OE1 doub N N 27 GLU CD OE2 sing N N 28 GLU OE2 HE2 sing N N 29 GLU OXT HXT sing N N 30 HOH O H1 sing N N 31 HOH O H2 sing N N 32 LEU N CA sing N N 33 LEU N H sing N N 34 LEU N H2 sing N N 35 LEU CA C sing N N 36 LEU CA CB sing N N 37 LEU CA HA sing N N 38 LEU C O doub N N 39 LEU C OXT sing N N 40 LEU CB CG sing N N 41 LEU CB HB2 sing N N 42 LEU CB HB3 sing N N 43 LEU CG CD1 sing N N 44 LEU CG CD2 sing N N 45 LEU CG HG sing N N 46 LEU CD1 HD11 sing N N 47 LEU CD1 HD12 sing N N 48 LEU CD1 HD13 sing N N 49 LEU CD2 HD21 sing N N 50 LEU CD2 HD22 sing N N 51 LEU CD2 HD23 sing N N 52 LEU OXT HXT sing N N 53 LYS N CA sing N N 54 LYS N H sing N N 55 LYS N H2 sing N N 56 LYS CA C sing N N 57 LYS CA CB sing N N 58 LYS CA HA sing N N 59 LYS C O doub N N 60 LYS C OXT sing N N 61 LYS CB CG sing N N 62 LYS CB HB2 sing N N 63 LYS CB HB3 sing N N 64 LYS CG CD sing N N 65 LYS CG HG2 sing N N 66 LYS CG HG3 sing N N 67 LYS CD CE sing N N 68 LYS CD HD2 sing N N 69 LYS CD HD3 sing N N 70 LYS CE NZ sing N N 71 LYS CE HE2 sing N N 72 LYS CE HE3 sing N N 73 LYS NZ HZ1 sing N N 74 LYS NZ HZ2 sing N N 75 LYS NZ HZ3 sing N N 76 LYS OXT HXT sing N N 77 MAA N CM sing N N 78 MAA N CA sing N N 79 MAA N H sing N N 80 MAA CM HM1 sing N N 81 MAA CM HM2 sing N N 82 MAA CM HM3 sing N N 83 MAA CA CB sing N N 84 MAA CA C sing N N 85 MAA CA HA sing N N 86 MAA CB HB1 sing N N 87 MAA CB HB2 sing N N 88 MAA CB HB3 sing N N 89 MAA C O doub N N 90 MAA C OXT sing N N 91 MAA OXT HXT sing N N 92 ORN N CA sing N N 93 ORN N H sing N N 94 ORN N H2 sing N N 95 ORN CA CB sing N N 96 ORN CA C sing N N 97 ORN CA HA sing N N 98 ORN CB CG sing N N 99 ORN CB HB2 sing N N 100 ORN CB HB3 sing N N 101 ORN CG CD sing N N 102 ORN CG HG2 sing N N 103 ORN CG HG3 sing N N 104 ORN CD NE sing N N 105 ORN CD HD2 sing N N 106 ORN CD HD3 sing N N 107 ORN NE HE1 sing N N 108 ORN NE HE2 sing N N 109 ORN C O doub N N 110 ORN C OXT sing N N 111 ORN OXT HXT sing N N 112 PHI N CA sing N N 113 PHI N H sing N N 114 PHI N H2 sing N N 115 PHI CA CB sing N N 116 PHI CA C sing N N 117 PHI CA HA sing N N 118 PHI CB CG sing N N 119 PHI CB HB2 sing N N 120 PHI CB HB3 sing N N 121 PHI CG CD1 doub Y N 122 PHI CG CD2 sing Y N 123 PHI CD1 CE1 sing Y N 124 PHI CD1 HD1 sing N N 125 PHI CD2 CE2 doub Y N 126 PHI CD2 HD2 sing N N 127 PHI CE1 CZ doub Y N 128 PHI CE1 HE1 sing N N 129 PHI CE2 CZ sing Y N 130 PHI CE2 HE2 sing N N 131 PHI CZ I sing N N 132 PHI C O doub N N 133 PHI C OXT sing N N 134 PHI OXT HXT sing N N 135 SO4 S O1 doub N N 136 SO4 S O2 doub N N 137 SO4 S O3 sing N N 138 SO4 S O4 sing N N 139 THR N CA sing N N 140 THR N H sing N N 141 THR N H2 sing N N 142 THR CA C sing N N 143 THR CA CB sing N N 144 THR CA HA sing N N 145 THR C O doub N N 146 THR C OXT sing N N 147 THR CB OG1 sing N N 148 THR CB CG2 sing N N 149 THR CB HB sing N N 150 THR OG1 HG1 sing N N 151 THR CG2 HG21 sing N N 152 THR CG2 HG22 sing N N 153 THR CG2 HG23 sing N N 154 THR OXT HXT sing N N 155 TYR N CA sing N N 156 TYR N H sing N N 157 TYR N H2 sing N N 158 TYR CA C sing N N 159 TYR CA CB sing N N 160 TYR CA HA sing N N 161 TYR C O doub N N 162 TYR C OXT sing N N 163 TYR CB CG sing N N 164 TYR CB HB2 sing N N 165 TYR CB HB3 sing N N 166 TYR CG CD1 doub Y N 167 TYR CG CD2 sing Y N 168 TYR CD1 CE1 sing Y N 169 TYR CD1 HD1 sing N N 170 TYR CD2 CE2 doub Y N 171 TYR CD2 HD2 sing N N 172 TYR CE1 CZ doub Y N 173 TYR CE1 HE1 sing N N 174 TYR CE2 CZ sing Y N 175 TYR CE2 HE2 sing N N 176 TYR CZ OH sing N N 177 TYR OH HH sing N N 178 TYR OXT HXT sing N N 179 VAL N CA sing N N 180 VAL N H sing N N 181 VAL N H2 sing N N 182 VAL CA C sing N N 183 VAL CA CB sing N N 184 VAL CA HA sing N N 185 VAL C O doub N N 186 VAL C OXT sing N N 187 VAL CB CG1 sing N N 188 VAL CB CG2 sing N N 189 VAL CB HB sing N N 190 VAL CG1 HG11 sing N N 191 VAL CG1 HG12 sing N N 192 VAL CG1 HG13 sing N N 193 VAL CG2 HG21 sing N N 194 VAL CG2 HG22 sing N N 195 VAL CG2 HG23 sing N N 196 VAL OXT HXT sing N N 197 # _pdbx_audit_support.funding_organization 'National Science Foundation (NSF, United States)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number CHE-1112188 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 4P4V _atom_sites.fract_transf_matrix[1][1] 0.016121 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016121 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022383 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL H I N O S # loop_