HEADER HYDROLASE/HYDROLASE INHIBITOR 24-MAR-14 4P6G TITLE CRYSTAL STRUCTURE OF HUMAN CATHEPSIN S BOUND TO A NON-COVALENT TITLE 2 INHIBITOR. COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATHEPSIN S; COMPND 3 CHAIN: A, B, C, D; COMPND 4 EC: 3.4.22.27; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: CTSS; SOURCE 6 EXPRESSION_SYSTEM: ENTEROBACTERIA PHAGE L1; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 268588 KEYWDS CATHESPSIN S, NON-COVALENT INHIBITOR, CYSTEINE PROTEASE, HYDROLASE- KEYWDS 2 HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.WANG,P.K.JADHAV REVDAT 2 27-DEC-23 4P6G 1 SOURCE KEYWDS REMARK REVDAT 1 29-OCT-14 4P6G 0 JRNL AUTH P.K.JADHAV,M.A.SCHIFFLER,K.GAVARDINAS,E.J.KIM,D.P.MATTHEWS, JRNL AUTH 2 M.A.STASZAK,D.S.COFFEY,B.W.SHAW,K.C.CASSIDY,R.A.BRIER, JRNL AUTH 3 Y.ZHANG,R.M.CHRISTIE,W.F.MATTER,K.QING,J.D.DURBIN,Y.WANG, JRNL AUTH 4 G.G.DENG JRNL TITL DISCOVERY OF CATHEPSIN S INHIBITOR LY3000328 FOR THE JRNL TITL 2 TREATMENT OF ABDOMINAL AORTIC ANEURYSM. JRNL REF ACS MED.CHEM.LETT. V. 5 1138 2014 JRNL REFN ISSN 1948-5875 JRNL PMID 25313327 JRNL DOI 10.1021/ML500283G REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0050 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 3 NUMBER OF REFLECTIONS : 129948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 0.700 REMARK 3 FREE R VALUE TEST SET COUNT : 966 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.58 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.62 REMARK 3 REFLECTION IN BIN (WORKING SET) : 9500 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2600 REMARK 3 BIN FREE R VALUE SET COUNT : 65 REMARK 3 BIN FREE R VALUE : 0.3220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6761 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 140 REMARK 3 SOLVENT ATOMS : 894 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.13000 REMARK 3 B22 (A**2) : 0.16000 REMARK 3 B33 (A**2) : 0.25000 REMARK 3 B12 (A**2) : 0.31000 REMARK 3 B13 (A**2) : 0.30000 REMARK 3 B23 (A**2) : -0.16000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.090 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.088 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.642 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.956 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7150 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9701 ; 1.316 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 883 ; 5.327 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 322 ;36.720 ;24.410 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1111 ;11.836 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;14.777 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 984 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5561 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4P6G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000200819. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUL-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 138388 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 65.210 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.5 REMARK 200 DATA REDUNDANCY : 2.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 2.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 8000, AMMONIUM SULFATE, SODIUM REMARK 280 ACETATE, PH 4.6, VAPOR DIFFUSION, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 219 REMARK 465 HIS A 220 REMARK 465 HIS A 221 REMARK 465 HIS A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 HIS A 225 REMARK 465 GLY B 219 REMARK 465 HIS B 220 REMARK 465 HIS B 221 REMARK 465 HIS B 222 REMARK 465 HIS B 223 REMARK 465 HIS B 224 REMARK 465 HIS B 225 REMARK 465 ILE C 0 REMARK 465 GLY C 219 REMARK 465 HIS C 220 REMARK 465 HIS C 221 REMARK 465 HIS C 222 REMARK 465 HIS C 223 REMARK 465 HIS C 224 REMARK 465 HIS C 225 REMARK 465 GLY D 219 REMARK 465 HIS D 220 REMARK 465 HIS D 221 REMARK 465 HIS D 222 REMARK 465 HIS D 223 REMARK 465 HIS D 224 REMARK 465 HIS D 225 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 98 CD CE NZ REMARK 470 LYS A 104 CG CD CE NZ REMARK 470 GLU A 218 CD OE1 OE2 REMARK 470 LYS B 98 CD CE NZ REMARK 470 LYS B 104 CG CD CE NZ REMARK 470 HIS B 188 ND1 CD2 CE1 NE2 REMARK 470 GLU B 218 CD OE1 OE2 REMARK 470 LYS C 98 CD CE NZ REMARK 470 GLU C 218 CD OE1 OE2 REMARK 470 LYS D 98 CD CE NZ REMARK 470 LYS D 104 CD CE NZ REMARK 470 GLU D 218 CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 487 O HOH B 627 1.95 REMARK 500 O HOH A 414 O HOH A 431 2.02 REMARK 500 NZ LYS B 64 O HOH B 401 2.16 REMARK 500 O HOH A 581 O HOH A 602 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 58 -126.13 -114.43 REMARK 500 ARG A 141 57.03 -90.73 REMARK 500 THR B 58 -127.15 -111.77 REMARK 500 ARG B 141 55.31 -91.46 REMARK 500 ASN B 163 4.97 -150.02 REMARK 500 THR C 58 -128.58 -111.91 REMARK 500 ARG C 141 55.24 -90.47 REMARK 500 ASN C 175 60.08 37.65 REMARK 500 CYS C 206 17.73 58.83 REMARK 500 THR D 58 -129.42 -114.94 REMARK 500 ARG D 141 54.22 -90.71 REMARK 500 ASN D 175 54.36 38.87 REMARK 500 CYS D 206 19.87 59.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2FZ A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2FZ B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2FZ C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 2FZ D 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4P6E RELATED DB: PDB REMARK 900 4P6E CONTAINS AN INHIBITOR OF SIMILAR SCAFFOLD. DBREF 4P6G A 0 217 UNP P25774 CATS_HUMAN 114 331 DBREF 4P6G B 0 217 UNP P25774 CATS_HUMAN 114 331 DBREF 4P6G C 0 217 UNP P25774 CATS_HUMAN 114 331 DBREF 4P6G D 0 217 UNP P25774 CATS_HUMAN 114 331 SEQADV 4P6G GLU A 218 UNP P25774 EXPRESSION TAG SEQADV 4P6G GLY A 219 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS A 220 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS A 221 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS A 222 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS A 223 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS A 224 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS A 225 UNP P25774 EXPRESSION TAG SEQADV 4P6G GLU B 218 UNP P25774 EXPRESSION TAG SEQADV 4P6G GLY B 219 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS B 220 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS B 221 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS B 222 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS B 223 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS B 224 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS B 225 UNP P25774 EXPRESSION TAG SEQADV 4P6G GLU C 218 UNP P25774 EXPRESSION TAG SEQADV 4P6G GLY C 219 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS C 220 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS C 221 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS C 222 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS C 223 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS C 224 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS C 225 UNP P25774 EXPRESSION TAG SEQADV 4P6G GLU D 218 UNP P25774 EXPRESSION TAG SEQADV 4P6G GLY D 219 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS D 220 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS D 221 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS D 222 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS D 223 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS D 224 UNP P25774 EXPRESSION TAG SEQADV 4P6G HIS D 225 UNP P25774 EXPRESSION TAG SEQRES 1 A 226 ILE LEU PRO ASP SER VAL ASP TRP ARG GLU LYS GLY CYS SEQRES 2 A 226 VAL THR GLU VAL LYS TYR GLN GLY SER CYS GLY ALA CYS SEQRES 3 A 226 TRP ALA PHE SER ALA VAL GLY ALA LEU GLU ALA GLN LEU SEQRES 4 A 226 LYS LEU LYS THR GLY LYS LEU VAL SER LEU SER ALA GLN SEQRES 5 A 226 ASN LEU VAL ASP CYS SER THR GLU LYS TYR GLY ASN LYS SEQRES 6 A 226 GLY CYS ASN GLY GLY PHE MET THR THR ALA PHE GLN TYR SEQRES 7 A 226 ILE ILE ASP ASN LYS GLY ILE ASP SER ASP ALA SER TYR SEQRES 8 A 226 PRO TYR LYS ALA MET ASP GLN LYS CYS GLN TYR ASP SER SEQRES 9 A 226 LYS TYR ARG ALA ALA THR CYS SER LYS TYR THR GLU LEU SEQRES 10 A 226 PRO TYR GLY ARG GLU ASP VAL LEU LYS GLU ALA VAL ALA SEQRES 11 A 226 ASN LYS GLY PRO VAL SER VAL GLY VAL ASP ALA ARG HIS SEQRES 12 A 226 PRO SER PHE PHE LEU TYR ARG SER GLY VAL TYR TYR GLU SEQRES 13 A 226 PRO SER CYS THR GLN ASN VAL ASN HIS GLY VAL LEU VAL SEQRES 14 A 226 VAL GLY TYR GLY ASP LEU ASN GLY LYS GLU TYR TRP LEU SEQRES 15 A 226 VAL LYS ASN SER TRP GLY HIS ASN PHE GLY GLU GLU GLY SEQRES 16 A 226 TYR ILE ARG MET ALA ARG ASN LYS GLY ASN HIS CYS GLY SEQRES 17 A 226 ILE ALA SER PHE PRO SER TYR PRO GLU ILE GLU GLY HIS SEQRES 18 A 226 HIS HIS HIS HIS HIS SEQRES 1 B 226 ILE LEU PRO ASP SER VAL ASP TRP ARG GLU LYS GLY CYS SEQRES 2 B 226 VAL THR GLU VAL LYS TYR GLN GLY SER CYS GLY ALA CYS SEQRES 3 B 226 TRP ALA PHE SER ALA VAL GLY ALA LEU GLU ALA GLN LEU SEQRES 4 B 226 LYS LEU LYS THR GLY LYS LEU VAL SER LEU SER ALA GLN SEQRES 5 B 226 ASN LEU VAL ASP CYS SER THR GLU LYS TYR GLY ASN LYS SEQRES 6 B 226 GLY CYS ASN GLY GLY PHE MET THR THR ALA PHE GLN TYR SEQRES 7 B 226 ILE ILE ASP ASN LYS GLY ILE ASP SER ASP ALA SER TYR SEQRES 8 B 226 PRO TYR LYS ALA MET ASP GLN LYS CYS GLN TYR ASP SER SEQRES 9 B 226 LYS TYR ARG ALA ALA THR CYS SER LYS TYR THR GLU LEU SEQRES 10 B 226 PRO TYR GLY ARG GLU ASP VAL LEU LYS GLU ALA VAL ALA SEQRES 11 B 226 ASN LYS GLY PRO VAL SER VAL GLY VAL ASP ALA ARG HIS SEQRES 12 B 226 PRO SER PHE PHE LEU TYR ARG SER GLY VAL TYR TYR GLU SEQRES 13 B 226 PRO SER CYS THR GLN ASN VAL ASN HIS GLY VAL LEU VAL SEQRES 14 B 226 VAL GLY TYR GLY ASP LEU ASN GLY LYS GLU TYR TRP LEU SEQRES 15 B 226 VAL LYS ASN SER TRP GLY HIS ASN PHE GLY GLU GLU GLY SEQRES 16 B 226 TYR ILE ARG MET ALA ARG ASN LYS GLY ASN HIS CYS GLY SEQRES 17 B 226 ILE ALA SER PHE PRO SER TYR PRO GLU ILE GLU GLY HIS SEQRES 18 B 226 HIS HIS HIS HIS HIS SEQRES 1 C 226 ILE LEU PRO ASP SER VAL ASP TRP ARG GLU LYS GLY CYS SEQRES 2 C 226 VAL THR GLU VAL LYS TYR GLN GLY SER CYS GLY ALA CYS SEQRES 3 C 226 TRP ALA PHE SER ALA VAL GLY ALA LEU GLU ALA GLN LEU SEQRES 4 C 226 LYS LEU LYS THR GLY LYS LEU VAL SER LEU SER ALA GLN SEQRES 5 C 226 ASN LEU VAL ASP CYS SER THR GLU LYS TYR GLY ASN LYS SEQRES 6 C 226 GLY CYS ASN GLY GLY PHE MET THR THR ALA PHE GLN TYR SEQRES 7 C 226 ILE ILE ASP ASN LYS GLY ILE ASP SER ASP ALA SER TYR SEQRES 8 C 226 PRO TYR LYS ALA MET ASP GLN LYS CYS GLN TYR ASP SER SEQRES 9 C 226 LYS TYR ARG ALA ALA THR CYS SER LYS TYR THR GLU LEU SEQRES 10 C 226 PRO TYR GLY ARG GLU ASP VAL LEU LYS GLU ALA VAL ALA SEQRES 11 C 226 ASN LYS GLY PRO VAL SER VAL GLY VAL ASP ALA ARG HIS SEQRES 12 C 226 PRO SER PHE PHE LEU TYR ARG SER GLY VAL TYR TYR GLU SEQRES 13 C 226 PRO SER CYS THR GLN ASN VAL ASN HIS GLY VAL LEU VAL SEQRES 14 C 226 VAL GLY TYR GLY ASP LEU ASN GLY LYS GLU TYR TRP LEU SEQRES 15 C 226 VAL LYS ASN SER TRP GLY HIS ASN PHE GLY GLU GLU GLY SEQRES 16 C 226 TYR ILE ARG MET ALA ARG ASN LYS GLY ASN HIS CYS GLY SEQRES 17 C 226 ILE ALA SER PHE PRO SER TYR PRO GLU ILE GLU GLY HIS SEQRES 18 C 226 HIS HIS HIS HIS HIS SEQRES 1 D 226 ILE LEU PRO ASP SER VAL ASP TRP ARG GLU LYS GLY CYS SEQRES 2 D 226 VAL THR GLU VAL LYS TYR GLN GLY SER CYS GLY ALA CYS SEQRES 3 D 226 TRP ALA PHE SER ALA VAL GLY ALA LEU GLU ALA GLN LEU SEQRES 4 D 226 LYS LEU LYS THR GLY LYS LEU VAL SER LEU SER ALA GLN SEQRES 5 D 226 ASN LEU VAL ASP CYS SER THR GLU LYS TYR GLY ASN LYS SEQRES 6 D 226 GLY CYS ASN GLY GLY PHE MET THR THR ALA PHE GLN TYR SEQRES 7 D 226 ILE ILE ASP ASN LYS GLY ILE ASP SER ASP ALA SER TYR SEQRES 8 D 226 PRO TYR LYS ALA MET ASP GLN LYS CYS GLN TYR ASP SER SEQRES 9 D 226 LYS TYR ARG ALA ALA THR CYS SER LYS TYR THR GLU LEU SEQRES 10 D 226 PRO TYR GLY ARG GLU ASP VAL LEU LYS GLU ALA VAL ALA SEQRES 11 D 226 ASN LYS GLY PRO VAL SER VAL GLY VAL ASP ALA ARG HIS SEQRES 12 D 226 PRO SER PHE PHE LEU TYR ARG SER GLY VAL TYR TYR GLU SEQRES 13 D 226 PRO SER CYS THR GLN ASN VAL ASN HIS GLY VAL LEU VAL SEQRES 14 D 226 VAL GLY TYR GLY ASP LEU ASN GLY LYS GLU TYR TRP LEU SEQRES 15 D 226 VAL LYS ASN SER TRP GLY HIS ASN PHE GLY GLU GLU GLY SEQRES 16 D 226 TYR ILE ARG MET ALA ARG ASN LYS GLY ASN HIS CYS GLY SEQRES 17 D 226 ILE ALA SER PHE PRO SER TYR PRO GLU ILE GLU GLY HIS SEQRES 18 D 226 HIS HIS HIS HIS HIS HET 2FZ A 301 35 HET 2FZ B 301 35 HET 2FZ C 301 35 HET 2FZ D 301 35 HETNAM 2FZ (3R,4S)-4-[(4-FLUOROBENZOYL)AMINO]-6-[4-(OXETAN-3-YL) HETNAM 2 2FZ PIPERAZIN-1-YL]-3,4-DIHYDRO-2H-CHROMEN-3-YL HETNAM 3 2FZ METHYLCARBAMATE FORMUL 5 2FZ 4(C25 H29 F N4 O5) FORMUL 9 HOH *894(H2 O) HELIX 1 AA1 ALA A 24 GLY A 43 1 20 HELIX 2 AA2 SER A 49 SER A 57 1 9 HELIX 3 AA3 THR A 58 GLY A 62 5 5 HELIX 4 AA4 LYS A 64 GLY A 68 5 5 HELIX 5 AA5 PHE A 70 LYS A 82 1 13 HELIX 6 AA6 ASP A 102 LYS A 104 5 3 HELIX 7 AA7 ARG A 120 LYS A 131 1 12 HELIX 8 AA8 HIS A 142 LEU A 147 1 6 HELIX 9 AA9 ASN A 204 ILE A 208 5 5 HELIX 10 AB1 ARG B 8 GLY B 11 5 4 HELIX 11 AB2 ALA B 24 GLY B 43 1 20 HELIX 12 AB3 SER B 49 SER B 57 1 9 HELIX 13 AB4 THR B 58 GLY B 62 5 5 HELIX 14 AB5 LYS B 64 GLY B 68 5 5 HELIX 15 AB6 PHE B 70 LYS B 82 1 13 HELIX 16 AB7 ASP B 102 LYS B 104 5 3 HELIX 17 AB8 ARG B 120 LYS B 131 1 12 HELIX 18 AB9 HIS B 142 LEU B 147 1 6 HELIX 19 AC1 ASN B 204 ILE B 208 5 5 HELIX 20 AC2 ARG C 8 GLY C 11 5 4 HELIX 21 AC3 ALA C 24 GLY C 43 1 20 HELIX 22 AC4 SER C 49 SER C 57 1 9 HELIX 23 AC5 THR C 58 GLY C 62 5 5 HELIX 24 AC6 LYS C 64 GLY C 68 5 5 HELIX 25 AC7 PHE C 70 LYS C 82 1 13 HELIX 26 AC8 ASP C 102 LYS C 104 5 3 HELIX 27 AC9 ARG C 120 LYS C 131 1 12 HELIX 28 AD1 HIS C 142 LEU C 147 1 6 HELIX 29 AD2 ASN C 204 ILE C 208 5 5 HELIX 30 AD3 ARG D 8 GLY D 11 5 4 HELIX 31 AD4 ALA D 24 GLY D 43 1 20 HELIX 32 AD5 SER D 49 SER D 57 1 9 HELIX 33 AD6 THR D 58 GLY D 62 5 5 HELIX 34 AD7 LYS D 64 GLY D 68 5 5 HELIX 35 AD8 PHE D 70 LYS D 82 1 13 HELIX 36 AD9 ASP D 102 LYS D 104 5 3 HELIX 37 AE1 ARG D 120 LYS D 131 1 12 HELIX 38 AE2 HIS D 142 LEU D 147 1 6 HELIX 39 AE3 ASN D 204 ILE D 208 5 5 SHEET 1 AA1 3 VAL A 5 ASP A 6 0 SHEET 2 AA1 3 HIS A 164 LEU A 174 -1 O TYR A 171 N VAL A 5 SHEET 3 AA1 3 VAL A 134 VAL A 138 -1 N VAL A 134 O VAL A 168 SHEET 1 AA2 5 VAL A 5 ASP A 6 0 SHEET 2 AA2 5 HIS A 164 LEU A 174 -1 O TYR A 171 N VAL A 5 SHEET 3 AA2 5 LYS A 177 LYS A 183 -1 O LYS A 183 N LEU A 167 SHEET 4 AA2 5 TYR A 195 ALA A 199 -1 O ILE A 196 N VAL A 182 SHEET 5 AA2 5 VAL A 152 TYR A 153 1 N TYR A 153 O ARG A 197 SHEET 1 AA3 2 ILE A 84 ASP A 85 0 SHEET 2 AA3 2 ARG A 106 ALA A 108 -1 O ALA A 107 N ILE A 84 SHEET 1 AA4 2 LYS A 112 GLU A 115 0 SHEET 2 AA4 2 SER A 213 GLU A 216 -1 O TYR A 214 N THR A 114 SHEET 1 AA5 3 VAL B 5 ASP B 6 0 SHEET 2 AA5 3 HIS B 164 LEU B 174 -1 O TYR B 171 N VAL B 5 SHEET 3 AA5 3 VAL B 134 VAL B 138 -1 N VAL B 136 O VAL B 166 SHEET 1 AA6 5 VAL B 5 ASP B 6 0 SHEET 2 AA6 5 HIS B 164 LEU B 174 -1 O TYR B 171 N VAL B 5 SHEET 3 AA6 5 LYS B 177 LYS B 183 -1 O LYS B 177 N LEU B 174 SHEET 4 AA6 5 TYR B 195 ALA B 199 -1 O ILE B 196 N VAL B 182 SHEET 5 AA6 5 VAL B 152 TYR B 153 1 N TYR B 153 O ARG B 197 SHEET 1 AA7 2 ILE B 84 ASP B 85 0 SHEET 2 AA7 2 ARG B 106 ALA B 108 -1 O ALA B 107 N ILE B 84 SHEET 1 AA8 2 LYS B 112 GLU B 115 0 SHEET 2 AA8 2 SER B 213 GLU B 216 -1 O TYR B 214 N THR B 114 SHEET 1 AA9 3 VAL C 5 ASP C 6 0 SHEET 2 AA9 3 HIS C 164 LEU C 174 -1 O TYR C 171 N VAL C 5 SHEET 3 AA9 3 VAL C 134 VAL C 138 -1 N VAL C 136 O VAL C 166 SHEET 1 AB1 5 VAL C 5 ASP C 6 0 SHEET 2 AB1 5 HIS C 164 LEU C 174 -1 O TYR C 171 N VAL C 5 SHEET 3 AB1 5 LYS C 177 LYS C 183 -1 O LYS C 183 N LEU C 167 SHEET 4 AB1 5 TYR C 195 ALA C 199 -1 O MET C 198 N TRP C 180 SHEET 5 AB1 5 VAL C 152 TYR C 153 1 N TYR C 153 O ARG C 197 SHEET 1 AB2 2 ILE C 84 ASP C 85 0 SHEET 2 AB2 2 ARG C 106 ALA C 108 -1 O ALA C 107 N ILE C 84 SHEET 1 AB3 2 LYS C 112 GLU C 115 0 SHEET 2 AB3 2 SER C 213 GLU C 216 -1 O GLU C 216 N LYS C 112 SHEET 1 AB4 3 VAL D 5 ASP D 6 0 SHEET 2 AB4 3 HIS D 164 LEU D 174 -1 O TYR D 171 N VAL D 5 SHEET 3 AB4 3 VAL D 134 VAL D 138 -1 N VAL D 134 O VAL D 168 SHEET 1 AB5 5 VAL D 5 ASP D 6 0 SHEET 2 AB5 5 HIS D 164 LEU D 174 -1 O TYR D 171 N VAL D 5 SHEET 3 AB5 5 LYS D 177 LYS D 183 -1 O LYS D 183 N LEU D 167 SHEET 4 AB5 5 TYR D 195 ALA D 199 -1 O MET D 198 N TRP D 180 SHEET 5 AB5 5 VAL D 152 TYR D 153 1 N TYR D 153 O ARG D 197 SHEET 1 AB6 2 ILE D 84 ASP D 85 0 SHEET 2 AB6 2 ARG D 106 ALA D 108 -1 O ALA D 107 N ILE D 84 SHEET 1 AB7 2 LYS D 112 GLU D 115 0 SHEET 2 AB7 2 SER D 213 GLU D 216 -1 O TYR D 214 N THR D 114 SSBOND 1 CYS A 22 CYS A 66 1555 1555 2.04 SSBOND 2 CYS A 56 CYS A 99 1555 1555 2.08 SSBOND 3 CYS A 158 CYS A 206 1555 1555 2.03 SSBOND 4 CYS B 22 CYS B 66 1555 1555 2.07 SSBOND 5 CYS B 56 CYS B 99 1555 1555 2.08 SSBOND 6 CYS B 158 CYS B 206 1555 1555 2.05 SSBOND 7 CYS C 22 CYS C 66 1555 1555 2.06 SSBOND 8 CYS C 56 CYS C 99 1555 1555 2.08 SSBOND 9 CYS C 158 CYS C 206 1555 1555 2.04 SSBOND 10 CYS D 22 CYS D 66 1555 1555 2.03 SSBOND 11 CYS D 56 CYS D 99 1555 1555 2.09 SSBOND 12 CYS D 158 CYS D 206 1555 1555 2.04 SITE 1 AC1 17 CYS A 25 TRP A 26 LYS A 64 ASN A 67 SITE 2 AC1 17 GLY A 68 GLY A 69 PHE A 70 MET A 71 SITE 3 AC1 17 ASN A 163 HIS A 164 GLY A 165 PHE A 211 SITE 4 AC1 17 HOH A 404 HOH A 595 SER D 4 ASP D 6 SITE 5 AC1 17 GLU D 9 SITE 1 AC2 17 CYS B 25 TRP B 26 LYS B 64 ASN B 67 SITE 2 AC2 17 GLY B 68 GLY B 69 PHE B 70 MET B 71 SITE 3 AC2 17 VAL B 162 ASN B 163 HIS B 164 GLY B 165 SITE 4 AC2 17 PHE B 211 HOH B 559 HOH B 564 SER C 4 SITE 5 AC2 17 GLU C 9 SITE 1 AC3 16 GLU B 9 HOH B 499 CYS C 25 TRP C 26 SITE 2 AC3 16 GLY C 62 LYS C 64 ASN C 67 GLY C 68 SITE 3 AC3 16 GLY C 69 PHE C 70 MET C 71 ASN C 163 SITE 4 AC3 16 HIS C 164 GLY C 165 PHE C 211 HOH C 557 SITE 1 AC4 15 GLU A 9 CYS D 25 TRP D 26 GLY D 62 SITE 2 AC4 15 LYS D 64 ASN D 67 GLY D 68 GLY D 69 SITE 3 AC4 15 PHE D 70 MET D 71 ASN D 163 HIS D 164 SITE 4 AC4 15 GLY D 165 PHE D 211 HOH D 503 CRYST1 67.253 67.311 67.778 100.90 94.86 117.99 P 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014869 0.007903 0.003437 0.00000 SCALE2 0.000000 0.016825 0.004531 0.00000 SCALE3 0.000000 0.000000 0.015335 0.00000