data_4P6J # _entry.id 4P6J # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4P6J pdb_00004p6j 10.2210/pdb4p6j/pdb WWPDB D_1000200153 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-24 2 'Structure model' 1 1 2014-12-31 3 'Structure model' 1 2 2015-01-14 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2017-11-01 6 'Structure model' 1 5 2019-12-11 7 'Structure model' 1 6 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Source and taxonomy' 7 5 'Structure model' 'Author supporting evidence' 8 6 'Structure model' 'Author supporting evidence' 9 7 'Structure model' 'Data collection' 10 7 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_entity_src_syn 4 4 'Structure model' pdbx_struct_oper_list 5 5 'Structure model' pdbx_struct_assembly_auth_evidence 6 6 'Structure model' pdbx_audit_support 7 7 'Structure model' chem_comp_atom 8 7 'Structure model' chem_comp_bond 9 7 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_entity_src_syn.pdbx_alt_source_flag' 4 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 6 'Structure model' '_pdbx_audit_support.funding_organization' 6 7 'Structure model' '_database_2.pdbx_DOI' 7 7 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 4P6J _pdbx_database_status.recvd_initial_deposition_date 2014-03-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs . _pdbx_database_status.methods_development_category . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4P6K PDB . unspecified 4P6L PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joh, N.H.' 1 'Acharya, R.' 2 'DeGrado, W.F.' 3 # _citation.abstract . _citation.abstract_id_CAS . _citation.book_id_ISBN . _citation.book_publisher ? _citation.book_publisher_city . _citation.book_title . _citation.coordinate_linkage . _citation.country US _citation.database_id_Medline . _citation.details . _citation.id primary _citation.journal_abbrev Science _citation.journal_id_ASTM SCIEAS _citation.journal_id_CSD 0038 _citation.journal_id_ISSN 1095-9203 _citation.journal_full . _citation.journal_issue . _citation.journal_volume 346 _citation.language . _citation.page_first 1520 _citation.page_last 1524 _citation.title 'De novo design of a transmembrane Zn2+-transporting four-helix bundle.' _citation.year 2014 _citation.database_id_CSD . _citation.pdbx_database_id_DOI 10.1126/science.1261172 _citation.pdbx_database_id_PubMed 25525248 _citation.unpublished_flag . # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Joh, N.H.' 1 ? primary 'Wang, T.' 2 ? primary 'Bhate, M.P.' 3 ? primary 'Acharya, R.' 4 ? primary 'Wu, Y.' 5 ? primary 'Grabe, M.' 6 ? primary 'Hong, M.' 7 ? primary 'Grigoryan, G.' 8 ? primary 'DeGrado, W.F.' 9 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Computationally Designed Transporter of Zn(II) and Proton' 3016.332 2 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'Y(4BF)KEIAHALFSALFALSELYIAVRY(NH2)' _entity_poly.pdbx_seq_one_letter_code_can YYKEIAHALFSALFALSELYIAVRYX _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'SULFATE ION' _pdbx_entity_nonpoly.comp_id SO4 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 4BF n 1 3 LYS n 1 4 GLU n 1 5 ILE n 1 6 ALA n 1 7 HIS n 1 8 ALA n 1 9 LEU n 1 10 PHE n 1 11 SER n 1 12 ALA n 1 13 LEU n 1 14 PHE n 1 15 ALA n 1 16 LEU n 1 17 SER n 1 18 GLU n 1 19 LEU n 1 20 TYR n 1 21 ILE n 1 22 ALA n 1 23 VAL n 1 24 ARG n 1 25 TYR n 1 26 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 26 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 4BF 'L-peptide linking' n 4-BROMO-L-PHENYLALANINE P-BROMO-L-PHENYLALANINE 'C9 H10 Br N O2' 244.085 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 1 1 TYR TYR A . n A 1 2 4BF 2 2 2 4BF FBR A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 NH2 26 26 26 NH2 NH2 A . n B 1 1 TYR 1 1 1 TYR TYR B . n B 1 2 4BF 2 2 2 4BF FBR B . n B 1 3 LYS 3 3 3 LYS LYS B . n B 1 4 GLU 4 4 4 GLU GLU B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 HIS 7 7 7 HIS HIS B . n B 1 8 ALA 8 8 8 ALA ALA B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 PHE 10 10 10 PHE PHE B . n B 1 11 SER 11 11 11 SER SER B . n B 1 12 ALA 12 12 12 ALA ALA B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 PHE 14 14 14 PHE PHE B . n B 1 15 ALA 15 15 15 ALA ALA B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 SER 17 17 17 SER SER B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 TYR 20 20 20 TYR TYR B . n B 1 21 ILE 21 21 21 ILE ILE B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 ARG 24 24 24 ARG ARG B . n B 1 25 TYR 25 25 25 TYR TYR B . n B 1 26 NH2 26 26 26 NH2 NH2 B . n # _pdbx_nonpoly_scheme.asym_id C _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id SO4 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 101 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id SO4 _pdbx_nonpoly_scheme.auth_mon_id SO4 _pdbx_nonpoly_scheme.pdb_strand_id B _pdbx_nonpoly_scheme.pdb_ins_code . # _software.citation_id ? _software.classification refinement _software.compiler_name . _software.compiler_version . _software.contact_author . _software.contact_author_email . _software.date . _software.description . _software.dependencies . _software.hardware . _software.language . _software.location . _software.mods . _software.name PHENIX _software.os . _software.os_version . _software.type . _software.version '(phenix.refine: 1.8.4_1496)' _software.pdbx_ordinal 1 # _cell.entry_id 4P6J _cell.length_a 41.450 _cell.length_b 41.450 _cell.length_c 63.990 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P6J _symmetry.space_group_name_H-M 'P 43 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 96 # _exptl.absorpt_coefficient_mu . _exptl.absorpt_correction_T_max . _exptl.absorpt_correction_T_min . _exptl.absorpt_correction_type . _exptl.absorpt_process_details . _exptl.entry_id 4P6J _exptl.crystals_number . _exptl.details . _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details . # _exptl_crystal.colour . _exptl_crystal.density_diffrn . _exptl_crystal.density_Matthews 2.28 _exptl_crystal.density_method . _exptl_crystal.density_percent_sol 46.01 _exptl_crystal.description . _exptl_crystal.F_000 . _exptl_crystal.id 1 _exptl_crystal.preparation . _exptl_crystal.size_max . _exptl_crystal.size_mid . _exptl_crystal.size_min . _exptl_crystal.size_rad . _exptl_crystal.colour_lustre . _exptl_crystal.colour_modifier . _exptl_crystal.colour_primary . _exptl_crystal.density_meas . _exptl_crystal.density_meas_esd . _exptl_crystal.density_meas_gt . _exptl_crystal.density_meas_lt . _exptl_crystal.density_meas_temp . _exptl_crystal.density_meas_temp_esd . _exptl_crystal.density_meas_temp_gt . _exptl_crystal.density_meas_temp_lt . _exptl_crystal.pdbx_crystal_image_url . _exptl_crystal.pdbx_crystal_image_format . _exptl_crystal.pdbx_mosaicity . _exptl_crystal.pdbx_mosaicity_esd . # _exptl_crystal_grow.apparatus . _exptl_crystal_grow.atmosphere . _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details . _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref . _exptl_crystal_grow.pH . _exptl_crystal_grow.pressure . _exptl_crystal_grow.pressure_esd . _exptl_crystal_grow.seeding . _exptl_crystal_grow.seeding_ref . _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details . _exptl_crystal_grow.temp_esd . _exptl_crystal_grow.time . _exptl_crystal_grow.pdbx_details ;1:1 (vol.) mixture of OG-bound Rocker with a para-bromo-phenylalanine at position 2 (Rocker Br-Phe2) (1 mM peptide, 2 mM ZnSO4, 50 mM OG) and the well solution (20 mM Li2SO4, 50 mM sodium citrate (pH 5.6), 21 % (w/v) PEG1000), inverted above the well solution and incubated at room temperature over two weeks ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.ambient_environment . _diffrn.ambient_temp 100 _diffrn.ambient_temp_details . _diffrn.ambient_temp_esd . _diffrn.crystal_id 1 _diffrn.crystal_support . _diffrn.crystal_treatment . _diffrn.details . _diffrn.id 1 _diffrn.ambient_pressure . _diffrn.ambient_pressure_esd . _diffrn.ambient_pressure_gt . _diffrn.ambient_pressure_lt . _diffrn.ambient_temp_gt . _diffrn.ambient_temp_lt . # _diffrn_detector.details . _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean . _diffrn_detector.dtime . _diffrn_detector.pdbx_frames_total . _diffrn_detector.pdbx_collection_time_total . _diffrn_detector.pdbx_collection_date 2012-06-16 # _diffrn_radiation.collimation . _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge . _diffrn_radiation.inhomogeneity . _diffrn_radiation.monochromator . _diffrn_radiation.polarisn_norm . _diffrn_radiation.polarisn_ratio . _diffrn_radiation.probe . _diffrn_radiation.type . _diffrn_radiation.xray_symbol . _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list . _diffrn_radiation.pdbx_wavelength . _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer . _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.919962 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current . _diffrn_source.details . _diffrn_source.diffrn_id 1 _diffrn_source.power . _diffrn_source.size . _diffrn_source.source SYNCHROTRON _diffrn_source.target . _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.voltage . _diffrn_source.take-off_angle . _diffrn_source.pdbx_wavelength_list 0.919962 _diffrn_source.pdbx_wavelength . _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate . _reflns.entry_id 4P6J _reflns.data_reduction_details . _reflns.data_reduction_method . _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 50 _reflns.details . _reflns.limit_h_max . _reflns.limit_h_min . _reflns.limit_k_max . _reflns.limit_k_min . _reflns.limit_l_max . _reflns.limit_l_min . _reflns.number_all . _reflns.number_obs 2713 _reflns.observed_criterion . _reflns.observed_criterion_F_max . _reflns.observed_criterion_F_min . _reflns.observed_criterion_I_max . _reflns.observed_criterion_I_min . _reflns.observed_criterion_sigma_F . _reflns.observed_criterion_sigma_I . _reflns.percent_possible_obs 99.9 _reflns.R_free_details . _reflns.Rmerge_F_all . _reflns.Rmerge_F_obs . _reflns.Friedel_coverage . _reflns.number_gt . _reflns.threshold_expression . _reflns.pdbx_redundancy 6.2 _reflns.pdbx_Rmerge_I_obs . _reflns.pdbx_Rmerge_I_all . _reflns.pdbx_Rsym_value . _reflns.pdbx_netI_over_av_sigmaI . _reflns.pdbx_netI_over_sigmaI 10.6 _reflns.pdbx_res_netI_over_av_sigmaI_2 . _reflns.pdbx_res_netI_over_sigmaI_2 . _reflns.pdbx_chi_squared . _reflns.pdbx_scaling_rejects . _reflns.pdbx_d_res_high_opt . _reflns.pdbx_d_res_low_opt . _reflns.pdbx_d_res_opt_method . _reflns.phase_calculation_details . _reflns.pdbx_Rrim_I_all . _reflns.pdbx_Rpim_I_all . _reflns.pdbx_d_opt . _reflns.pdbx_number_measured_all . _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4P6J _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 2615 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.62 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 34.789 _refine.ls_d_res_high 2.800 _refine.ls_percent_reflns_obs 99.92 _refine.ls_R_factor_obs 0.2488 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2476 _refine.ls_R_factor_R_free 0.2720 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.55 _refine.ls_number_reflns_R_free 119 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.00 _refine.pdbx_overall_phase_error 32.22 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 422 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 427 _refine_hist.d_res_high 2.800 _refine_hist.d_res_low 34.789 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.002 ? ? 438 'X-RAY DIFFRACTION' ? f_angle_d 0.452 ? ? 594 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 10.337 ? ? 144 'X-RAY DIFFRACTION' ? f_chiral_restr 0.020 ? ? 64 'X-RAY DIFFRACTION' ? f_plane_restr 0.001 ? ? 70 'X-RAY DIFFRACTION' ? # _struct.entry_id 4P6J _struct.title 'Crystal Structure of the Computationally Designed Transmembrane Metallotransporter with 4-bromophenylalanine in Octyl Glucoside' _struct.pdbx_model_details . _struct.pdbx_formula_weight . _struct.pdbx_formula_weight_method . _struct.pdbx_model_type_details . _struct.pdbx_CASP_flag . # _struct_keywords.entry_id 4P6J _struct_keywords.text 'transmembrane, transporter, de-novo designed, 4-bromophenylalanine, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4P6J _struct_ref.pdbx_db_accession 4P6J _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4P6J A 1 ? 26 ? 4P6J 1 ? 26 ? 1 26 2 1 4P6J B 1 ? 26 ? 4P6J 1 ? 26 ? 1 26 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1600 ? 1 MORE -22 ? 1 'SSA (A^2)' 4280 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'equilibrium centrifugation' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.details ;THE BIOLOGICAL UNIT WAS DETERMINED BY COMBINED APPROACH OF COMPUTATIONAL DESIGN, ANALYTICAL ULTRACENTRIFUGATION AND 19F-CODEX VIA SOLID-STATE NMR. AS PER THE AUTHORS THIS TETRAMERIC ASSEMBLY IS REPORTED IN THE SEPARATE PDB FOR SOLID-STATE NMR MODEL ACCOMPANYING THE PAPER CITING THIS PDB. ; _struct_biol.id 1 _struct_biol.pdbx_aggregation_state ? _struct_biol.pdbx_assembly_method ? _struct_biol.pdbx_formula_weight ? _struct_biol.pdbx_formula_weight_method ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 1 ? TYR A 25 ? TYR A 1 TYR A 25 1 ? 25 HELX_P HELX_P2 AA2 4BF B 2 ? TYR B 25 ? 4BF B 2 TYR B 25 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A TYR 1 C ? ? ? 1_555 A 4BF 2 N ? ? A TYR 1 A 4BF 2 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A 4BF 2 C ? ? ? 1_555 A LYS 3 N ? ? A 4BF 2 A LYS 3 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale3 covale both ? A TYR 25 C ? ? ? 1_555 A NH2 26 N ? ? A TYR 25 A NH2 26 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? B TYR 1 C ? ? ? 1_555 B 4BF 2 N ? ? B TYR 1 B 4BF 2 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale5 covale both ? B 4BF 2 C ? ? ? 1_555 B LYS 3 N ? ? B 4BF 2 B LYS 3 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale6 covale both ? B TYR 25 C ? ? ? 1_555 B NH2 26 N ? ? B TYR 25 B NH2 26 1_555 ? ? ? ? ? ? ? 1.328 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id B _struct_site.pdbx_auth_comp_id SO4 _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 3 _struct_site.details 'binding site for residue SO4 B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 TYR B 1 ? TYR B 1 . ? 1_555 ? 2 AC1 3 4BF B 2 ? 4BF B 2 . ? 1_555 ? 3 AC1 3 LYS B 3 ? LYS B 3 . ? 1_555 ? # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 4BF CD1 C Y N 1 4BF CE1 C Y N 2 4BF CZ C Y N 3 4BF BR BR N N 4 4BF CE2 C Y N 5 4BF CD2 C Y N 6 4BF CG C Y N 7 4BF CB C N N 8 4BF CA C N S 9 4BF N N N N 10 4BF C C N N 11 4BF OXT O N N 12 4BF O O N N 13 4BF HD1 H N N 14 4BF HE1 H N N 15 4BF HE2 H N N 16 4BF HD2 H N N 17 4BF HB3 H N N 18 4BF HB2 H N N 19 4BF HA H N N 20 4BF H H N N 21 4BF H2 H N N 22 4BF HXT H N N 23 ALA N N N N 24 ALA CA C N S 25 ALA C C N N 26 ALA O O N N 27 ALA CB C N N 28 ALA OXT O N N 29 ALA H H N N 30 ALA H2 H N N 31 ALA HA H N N 32 ALA HB1 H N N 33 ALA HB2 H N N 34 ALA HB3 H N N 35 ALA HXT H N N 36 ARG N N N N 37 ARG CA C N S 38 ARG C C N N 39 ARG O O N N 40 ARG CB C N N 41 ARG CG C N N 42 ARG CD C N N 43 ARG NE N N N 44 ARG CZ C N N 45 ARG NH1 N N N 46 ARG NH2 N N N 47 ARG OXT O N N 48 ARG H H N N 49 ARG H2 H N N 50 ARG HA H N N 51 ARG HB2 H N N 52 ARG HB3 H N N 53 ARG HG2 H N N 54 ARG HG3 H N N 55 ARG HD2 H N N 56 ARG HD3 H N N 57 ARG HE H N N 58 ARG HH11 H N N 59 ARG HH12 H N N 60 ARG HH21 H N N 61 ARG HH22 H N N 62 ARG HXT H N N 63 GLU N N N N 64 GLU CA C N S 65 GLU C C N N 66 GLU O O N N 67 GLU CB C N N 68 GLU CG C N N 69 GLU CD C N N 70 GLU OE1 O N N 71 GLU OE2 O N N 72 GLU OXT O N N 73 GLU H H N N 74 GLU H2 H N N 75 GLU HA H N N 76 GLU HB2 H N N 77 GLU HB3 H N N 78 GLU HG2 H N N 79 GLU HG3 H N N 80 GLU HE2 H N N 81 GLU HXT H N N 82 HIS N N N N 83 HIS CA C N S 84 HIS C C N N 85 HIS O O N N 86 HIS CB C N N 87 HIS CG C Y N 88 HIS ND1 N Y N 89 HIS CD2 C Y N 90 HIS CE1 C Y N 91 HIS NE2 N Y N 92 HIS OXT O N N 93 HIS H H N N 94 HIS H2 H N N 95 HIS HA H N N 96 HIS HB2 H N N 97 HIS HB3 H N N 98 HIS HD1 H N N 99 HIS HD2 H N N 100 HIS HE1 H N N 101 HIS HE2 H N N 102 HIS HXT H N N 103 ILE N N N N 104 ILE CA C N S 105 ILE C C N N 106 ILE O O N N 107 ILE CB C N S 108 ILE CG1 C N N 109 ILE CG2 C N N 110 ILE CD1 C N N 111 ILE OXT O N N 112 ILE H H N N 113 ILE H2 H N N 114 ILE HA H N N 115 ILE HB H N N 116 ILE HG12 H N N 117 ILE HG13 H N N 118 ILE HG21 H N N 119 ILE HG22 H N N 120 ILE HG23 H N N 121 ILE HD11 H N N 122 ILE HD12 H N N 123 ILE HD13 H N N 124 ILE HXT H N N 125 LEU N N N N 126 LEU CA C N S 127 LEU C C N N 128 LEU O O N N 129 LEU CB C N N 130 LEU CG C N N 131 LEU CD1 C N N 132 LEU CD2 C N N 133 LEU OXT O N N 134 LEU H H N N 135 LEU H2 H N N 136 LEU HA H N N 137 LEU HB2 H N N 138 LEU HB3 H N N 139 LEU HG H N N 140 LEU HD11 H N N 141 LEU HD12 H N N 142 LEU HD13 H N N 143 LEU HD21 H N N 144 LEU HD22 H N N 145 LEU HD23 H N N 146 LEU HXT H N N 147 LYS N N N N 148 LYS CA C N S 149 LYS C C N N 150 LYS O O N N 151 LYS CB C N N 152 LYS CG C N N 153 LYS CD C N N 154 LYS CE C N N 155 LYS NZ N N N 156 LYS OXT O N N 157 LYS H H N N 158 LYS H2 H N N 159 LYS HA H N N 160 LYS HB2 H N N 161 LYS HB3 H N N 162 LYS HG2 H N N 163 LYS HG3 H N N 164 LYS HD2 H N N 165 LYS HD3 H N N 166 LYS HE2 H N N 167 LYS HE3 H N N 168 LYS HZ1 H N N 169 LYS HZ2 H N N 170 LYS HZ3 H N N 171 LYS HXT H N N 172 NH2 N N N N 173 NH2 HN1 H N N 174 NH2 HN2 H N N 175 PHE N N N N 176 PHE CA C N S 177 PHE C C N N 178 PHE O O N N 179 PHE CB C N N 180 PHE CG C Y N 181 PHE CD1 C Y N 182 PHE CD2 C Y N 183 PHE CE1 C Y N 184 PHE CE2 C Y N 185 PHE CZ C Y N 186 PHE OXT O N N 187 PHE H H N N 188 PHE H2 H N N 189 PHE HA H N N 190 PHE HB2 H N N 191 PHE HB3 H N N 192 PHE HD1 H N N 193 PHE HD2 H N N 194 PHE HE1 H N N 195 PHE HE2 H N N 196 PHE HZ H N N 197 PHE HXT H N N 198 SER N N N N 199 SER CA C N S 200 SER C C N N 201 SER O O N N 202 SER CB C N N 203 SER OG O N N 204 SER OXT O N N 205 SER H H N N 206 SER H2 H N N 207 SER HA H N N 208 SER HB2 H N N 209 SER HB3 H N N 210 SER HG H N N 211 SER HXT H N N 212 SO4 S S N N 213 SO4 O1 O N N 214 SO4 O2 O N N 215 SO4 O3 O N N 216 SO4 O4 O N N 217 TYR N N N N 218 TYR CA C N S 219 TYR C C N N 220 TYR O O N N 221 TYR CB C N N 222 TYR CG C Y N 223 TYR CD1 C Y N 224 TYR CD2 C Y N 225 TYR CE1 C Y N 226 TYR CE2 C Y N 227 TYR CZ C Y N 228 TYR OH O N N 229 TYR OXT O N N 230 TYR H H N N 231 TYR H2 H N N 232 TYR HA H N N 233 TYR HB2 H N N 234 TYR HB3 H N N 235 TYR HD1 H N N 236 TYR HD2 H N N 237 TYR HE1 H N N 238 TYR HE2 H N N 239 TYR HH H N N 240 TYR HXT H N N 241 VAL N N N N 242 VAL CA C N S 243 VAL C C N N 244 VAL O O N N 245 VAL CB C N N 246 VAL CG1 C N N 247 VAL CG2 C N N 248 VAL OXT O N N 249 VAL H H N N 250 VAL H2 H N N 251 VAL HA H N N 252 VAL HB H N N 253 VAL HG11 H N N 254 VAL HG12 H N N 255 VAL HG13 H N N 256 VAL HG21 H N N 257 VAL HG22 H N N 258 VAL HG23 H N N 259 VAL HXT H N N 260 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 4BF CD1 CE1 doub Y N 1 4BF CD1 CG sing Y N 2 4BF CD1 HD1 sing N N 3 4BF CE1 CZ sing Y N 4 4BF CE1 HE1 sing N N 5 4BF CZ BR sing N N 6 4BF CZ CE2 doub Y N 7 4BF CE2 CD2 sing Y N 8 4BF CE2 HE2 sing N N 9 4BF CD2 CG doub Y N 10 4BF CD2 HD2 sing N N 11 4BF CG CB sing N N 12 4BF CB CA sing N N 13 4BF CB HB3 sing N N 14 4BF CB HB2 sing N N 15 4BF CA N sing N N 16 4BF CA C sing N N 17 4BF CA HA sing N N 18 4BF N H sing N N 19 4BF N H2 sing N N 20 4BF C OXT sing N N 21 4BF C O doub N N 22 4BF OXT HXT sing N N 23 ALA N CA sing N N 24 ALA N H sing N N 25 ALA N H2 sing N N 26 ALA CA C sing N N 27 ALA CA CB sing N N 28 ALA CA HA sing N N 29 ALA C O doub N N 30 ALA C OXT sing N N 31 ALA CB HB1 sing N N 32 ALA CB HB2 sing N N 33 ALA CB HB3 sing N N 34 ALA OXT HXT sing N N 35 ARG N CA sing N N 36 ARG N H sing N N 37 ARG N H2 sing N N 38 ARG CA C sing N N 39 ARG CA CB sing N N 40 ARG CA HA sing N N 41 ARG C O doub N N 42 ARG C OXT sing N N 43 ARG CB CG sing N N 44 ARG CB HB2 sing N N 45 ARG CB HB3 sing N N 46 ARG CG CD sing N N 47 ARG CG HG2 sing N N 48 ARG CG HG3 sing N N 49 ARG CD NE sing N N 50 ARG CD HD2 sing N N 51 ARG CD HD3 sing N N 52 ARG NE CZ sing N N 53 ARG NE HE sing N N 54 ARG CZ NH1 sing N N 55 ARG CZ NH2 doub N N 56 ARG NH1 HH11 sing N N 57 ARG NH1 HH12 sing N N 58 ARG NH2 HH21 sing N N 59 ARG NH2 HH22 sing N N 60 ARG OXT HXT sing N N 61 GLU N CA sing N N 62 GLU N H sing N N 63 GLU N H2 sing N N 64 GLU CA C sing N N 65 GLU CA CB sing N N 66 GLU CA HA sing N N 67 GLU C O doub N N 68 GLU C OXT sing N N 69 GLU CB CG sing N N 70 GLU CB HB2 sing N N 71 GLU CB HB3 sing N N 72 GLU CG CD sing N N 73 GLU CG HG2 sing N N 74 GLU CG HG3 sing N N 75 GLU CD OE1 doub N N 76 GLU CD OE2 sing N N 77 GLU OE2 HE2 sing N N 78 GLU OXT HXT sing N N 79 HIS N CA sing N N 80 HIS N H sing N N 81 HIS N H2 sing N N 82 HIS CA C sing N N 83 HIS CA CB sing N N 84 HIS CA HA sing N N 85 HIS C O doub N N 86 HIS C OXT sing N N 87 HIS CB CG sing N N 88 HIS CB HB2 sing N N 89 HIS CB HB3 sing N N 90 HIS CG ND1 sing Y N 91 HIS CG CD2 doub Y N 92 HIS ND1 CE1 doub Y N 93 HIS ND1 HD1 sing N N 94 HIS CD2 NE2 sing Y N 95 HIS CD2 HD2 sing N N 96 HIS CE1 NE2 sing Y N 97 HIS CE1 HE1 sing N N 98 HIS NE2 HE2 sing N N 99 HIS OXT HXT sing N N 100 ILE N CA sing N N 101 ILE N H sing N N 102 ILE N H2 sing N N 103 ILE CA C sing N N 104 ILE CA CB sing N N 105 ILE CA HA sing N N 106 ILE C O doub N N 107 ILE C OXT sing N N 108 ILE CB CG1 sing N N 109 ILE CB CG2 sing N N 110 ILE CB HB sing N N 111 ILE CG1 CD1 sing N N 112 ILE CG1 HG12 sing N N 113 ILE CG1 HG13 sing N N 114 ILE CG2 HG21 sing N N 115 ILE CG2 HG22 sing N N 116 ILE CG2 HG23 sing N N 117 ILE CD1 HD11 sing N N 118 ILE CD1 HD12 sing N N 119 ILE CD1 HD13 sing N N 120 ILE OXT HXT sing N N 121 LEU N CA sing N N 122 LEU N H sing N N 123 LEU N H2 sing N N 124 LEU CA C sing N N 125 LEU CA CB sing N N 126 LEU CA HA sing N N 127 LEU C O doub N N 128 LEU C OXT sing N N 129 LEU CB CG sing N N 130 LEU CB HB2 sing N N 131 LEU CB HB3 sing N N 132 LEU CG CD1 sing N N 133 LEU CG CD2 sing N N 134 LEU CG HG sing N N 135 LEU CD1 HD11 sing N N 136 LEU CD1 HD12 sing N N 137 LEU CD1 HD13 sing N N 138 LEU CD2 HD21 sing N N 139 LEU CD2 HD22 sing N N 140 LEU CD2 HD23 sing N N 141 LEU OXT HXT sing N N 142 LYS N CA sing N N 143 LYS N H sing N N 144 LYS N H2 sing N N 145 LYS CA C sing N N 146 LYS CA CB sing N N 147 LYS CA HA sing N N 148 LYS C O doub N N 149 LYS C OXT sing N N 150 LYS CB CG sing N N 151 LYS CB HB2 sing N N 152 LYS CB HB3 sing N N 153 LYS CG CD sing N N 154 LYS CG HG2 sing N N 155 LYS CG HG3 sing N N 156 LYS CD CE sing N N 157 LYS CD HD2 sing N N 158 LYS CD HD3 sing N N 159 LYS CE NZ sing N N 160 LYS CE HE2 sing N N 161 LYS CE HE3 sing N N 162 LYS NZ HZ1 sing N N 163 LYS NZ HZ2 sing N N 164 LYS NZ HZ3 sing N N 165 LYS OXT HXT sing N N 166 NH2 N HN1 sing N N 167 NH2 N HN2 sing N N 168 PHE N CA sing N N 169 PHE N H sing N N 170 PHE N H2 sing N N 171 PHE CA C sing N N 172 PHE CA CB sing N N 173 PHE CA HA sing N N 174 PHE C O doub N N 175 PHE C OXT sing N N 176 PHE CB CG sing N N 177 PHE CB HB2 sing N N 178 PHE CB HB3 sing N N 179 PHE CG CD1 doub Y N 180 PHE CG CD2 sing Y N 181 PHE CD1 CE1 sing Y N 182 PHE CD1 HD1 sing N N 183 PHE CD2 CE2 doub Y N 184 PHE CD2 HD2 sing N N 185 PHE CE1 CZ doub Y N 186 PHE CE1 HE1 sing N N 187 PHE CE2 CZ sing Y N 188 PHE CE2 HE2 sing N N 189 PHE CZ HZ sing N N 190 PHE OXT HXT sing N N 191 SER N CA sing N N 192 SER N H sing N N 193 SER N H2 sing N N 194 SER CA C sing N N 195 SER CA CB sing N N 196 SER CA HA sing N N 197 SER C O doub N N 198 SER C OXT sing N N 199 SER CB OG sing N N 200 SER CB HB2 sing N N 201 SER CB HB3 sing N N 202 SER OG HG sing N N 203 SER OXT HXT sing N N 204 SO4 S O1 doub N N 205 SO4 S O2 doub N N 206 SO4 S O3 sing N N 207 SO4 S O4 sing N N 208 TYR N CA sing N N 209 TYR N H sing N N 210 TYR N H2 sing N N 211 TYR CA C sing N N 212 TYR CA CB sing N N 213 TYR CA HA sing N N 214 TYR C O doub N N 215 TYR C OXT sing N N 216 TYR CB CG sing N N 217 TYR CB HB2 sing N N 218 TYR CB HB3 sing N N 219 TYR CG CD1 doub Y N 220 TYR CG CD2 sing Y N 221 TYR CD1 CE1 sing Y N 222 TYR CD1 HD1 sing N N 223 TYR CD2 CE2 doub Y N 224 TYR CD2 HD2 sing N N 225 TYR CE1 CZ doub Y N 226 TYR CE1 HE1 sing N N 227 TYR CE2 CZ sing Y N 228 TYR CE2 HE2 sing N N 229 TYR CZ OH sing N N 230 TYR OH HH sing N N 231 TYR OXT HXT sing N N 232 VAL N CA sing N N 233 VAL N H sing N N 234 VAL N H2 sing N N 235 VAL CA C sing N N 236 VAL CA CB sing N N 237 VAL CA HA sing N N 238 VAL C O doub N N 239 VAL C OXT sing N N 240 VAL CB CG1 sing N N 241 VAL CB CG2 sing N N 242 VAL CB HB sing N N 243 VAL CG1 HG11 sing N N 244 VAL CG1 HG12 sing N N 245 VAL CG1 HG13 sing N N 246 VAL CG2 HG21 sing N N 247 VAL CG2 HG22 sing N N 248 VAL CG2 HG23 sing N N 249 VAL OXT HXT sing N N 250 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 7U01AI074571 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 3F32GM096727 2 # _atom_sites.entry_id 4P6J _atom_sites.fract_transf_matrix[1][1] 0.024125 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024125 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015627 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol BR C N O S # loop_