data_4P6L # _entry.id 4P6L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4P6L pdb_00004p6l 10.2210/pdb4p6l/pdb WWPDB D_1000200198 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-24 2 'Structure model' 1 1 2014-12-31 3 'Structure model' 1 2 2015-01-14 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2017-11-01 6 'Structure model' 1 5 2019-12-11 7 'Structure model' 1 6 2023-12-27 8 'Structure model' 1 7 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Source and taxonomy' 7 5 'Structure model' 'Author supporting evidence' 8 6 'Structure model' 'Author supporting evidence' 9 7 'Structure model' 'Data collection' 10 7 'Structure model' 'Database references' 11 8 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_entity_src_syn 4 4 'Structure model' pdbx_struct_oper_list 5 5 'Structure model' pdbx_struct_assembly_auth_evidence 6 6 'Structure model' pdbx_audit_support 7 7 'Structure model' chem_comp_atom 8 7 'Structure model' chem_comp_bond 9 7 'Structure model' database_2 10 8 'Structure model' pdbx_entry_details 11 8 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_entity_src_syn.pdbx_alt_source_flag' 4 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 5 6 'Structure model' '_pdbx_audit_support.funding_organization' 6 7 'Structure model' '_database_2.pdbx_DOI' 7 7 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 4P6L _pdbx_database_status.recvd_initial_deposition_date 2014-03-25 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs . _pdbx_database_status.methods_development_category . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 4P6J PDB . unspecified 4P6K PDB . # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joh, N.H.' 1 'Acharya, R.' 2 'DeGrado, W.F.' 3 # _citation.abstract . _citation.abstract_id_CAS . _citation.book_id_ISBN . _citation.book_publisher ? _citation.book_publisher_city . _citation.book_title . _citation.coordinate_linkage . _citation.country US _citation.database_id_Medline . _citation.details . _citation.id primary _citation.journal_abbrev Science _citation.journal_id_ASTM SCIEAS _citation.journal_id_CSD 0038 _citation.journal_id_ISSN 1095-9203 _citation.journal_full . _citation.journal_issue . _citation.journal_volume 346 _citation.language . _citation.page_first 1520 _citation.page_last 1524 _citation.title 'De novo design of a transmembrane Zn2+-transporting four-helix bundle.' _citation.year 2014 _citation.database_id_CSD . _citation.pdbx_database_id_DOI 10.1126/science.1261172 _citation.pdbx_database_id_PubMed 25525248 _citation.unpublished_flag . # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Joh, N.H.' 1 ? primary 'Wang, T.' 2 ? primary 'Bhate, M.P.' 3 ? primary 'Acharya, R.' 4 ? primary 'Wu, Y.' 5 ? primary 'Grabe, M.' 6 ? primary 'Hong, M.' 7 ? primary 'Grigoryan, G.' 8 ? primary 'DeGrado, W.F.' 9 ? # _entity.id 1 _entity.type polymer _entity.src_method syn _entity.pdbx_description 'Computationally Designed Transporter of Zn(II) and proton' _entity.formula_weight 2953.436 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code 'YYKEIAHALFSALFALSELYIAVRY(NH2)' _entity_poly.pdbx_seq_one_letter_code_can YYKEIAHALFSALFALSELYIAVRYX _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 TYR n 1 2 TYR n 1 3 LYS n 1 4 GLU n 1 5 ILE n 1 6 ALA n 1 7 HIS n 1 8 ALA n 1 9 LEU n 1 10 PHE n 1 11 SER n 1 12 ALA n 1 13 LEU n 1 14 PHE n 1 15 ALA n 1 16 LEU n 1 17 SER n 1 18 GLU n 1 19 LEU n 1 20 TYR n 1 21 ILE n 1 22 ALA n 1 23 VAL n 1 24 ARG n 1 25 TYR n 1 26 NH2 n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 26 _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NH2 non-polymer . 'AMINO GROUP' ? 'H2 N' 16.023 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 TYR 1 1 1 TYR TYR A . n A 1 2 TYR 2 2 2 TYR TYR A . n A 1 3 LYS 3 3 3 LYS LYS A . n A 1 4 GLU 4 4 4 GLU GLU A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 HIS 7 7 7 HIS HIS A . n A 1 8 ALA 8 8 8 ALA ALA A . n A 1 9 LEU 9 9 9 LEU LEU A . n A 1 10 PHE 10 10 10 PHE PHE A . n A 1 11 SER 11 11 11 SER SER A . n A 1 12 ALA 12 12 12 ALA ALA A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 ALA 15 15 15 ALA ALA A . n A 1 16 LEU 16 16 16 LEU LEU A . n A 1 17 SER 17 17 17 SER SER A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LEU 19 19 19 LEU LEU A . n A 1 20 TYR 20 20 20 TYR TYR A . n A 1 21 ILE 21 21 21 ILE ILE A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 TYR 25 25 25 TYR TYR A . n A 1 26 NH2 26 26 26 NH2 NH2 A . n B 1 1 TYR 1 1 1 TYR TYR B . n B 1 2 TYR 2 2 2 TYR TYR B . n B 1 3 LYS 3 3 3 LYS LYS B . n B 1 4 GLU 4 4 4 GLU GLU B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 ALA 6 6 6 ALA ALA B . n B 1 7 HIS 7 7 7 HIS HIS B . n B 1 8 ALA 8 8 8 ALA ALA B . n B 1 9 LEU 9 9 9 LEU LEU B . n B 1 10 PHE 10 10 10 PHE PHE B . n B 1 11 SER 11 11 11 SER SER B . n B 1 12 ALA 12 12 12 ALA ALA B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 PHE 14 14 14 PHE PHE B . n B 1 15 ALA 15 15 15 ALA ALA B . n B 1 16 LEU 16 16 16 LEU LEU B . n B 1 17 SER 17 17 17 SER SER B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 LEU 19 19 19 LEU LEU B . n B 1 20 TYR 20 20 20 TYR TYR B . n B 1 21 ILE 21 21 21 ILE ILE B . n B 1 22 ALA 22 22 22 ALA ALA B . n B 1 23 VAL 23 23 23 VAL VAL B . n B 1 24 ARG 24 24 24 ARG ARG B . n B 1 25 TYR 25 25 25 TYR TYR B . n B 1 26 NH2 26 26 26 NH2 NH2 B . n # _software.citation_id ? _software.classification refinement _software.compiler_name . _software.compiler_version . _software.contact_author . _software.contact_author_email . _software.date . _software.description . _software.dependencies . _software.hardware . _software.language . _software.location . _software.mods . _software.name PHENIX _software.os . _software.os_version . _software.type . _software.version '(phenix.refine: 1.8.4_1496)' _software.pdbx_ordinal 1 # _cell.entry_id 4P6L _cell.length_a 87.120 _cell.length_b 87.120 _cell.length_c 87.120 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4P6L _symmetry.cell_setting . _symmetry.Int_Tables_number 199 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'I 21 3' _symmetry.pdbx_full_space_group_name_H-M . # _exptl.absorpt_coefficient_mu . _exptl.absorpt_correction_T_max . _exptl.absorpt_correction_T_min . _exptl.absorpt_correction_type . _exptl.absorpt_process_details . _exptl.entry_id 4P6L _exptl.crystals_number . _exptl.details . _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details . # _exptl_crystal.colour . _exptl_crystal.density_diffrn . _exptl_crystal.density_Matthews 4.66 _exptl_crystal.density_method . _exptl_crystal.density_percent_sol 73.63 _exptl_crystal.description . _exptl_crystal.F_000 . _exptl_crystal.id 1 _exptl_crystal.preparation . _exptl_crystal.size_max . _exptl_crystal.size_mid . _exptl_crystal.size_min . _exptl_crystal.size_rad . _exptl_crystal.colour_lustre . _exptl_crystal.colour_modifier . _exptl_crystal.colour_primary . _exptl_crystal.density_meas . _exptl_crystal.density_meas_esd . _exptl_crystal.density_meas_gt . _exptl_crystal.density_meas_lt . _exptl_crystal.density_meas_temp . _exptl_crystal.density_meas_temp_esd . _exptl_crystal.density_meas_temp_gt . _exptl_crystal.density_meas_temp_lt . _exptl_crystal.pdbx_crystal_image_url . _exptl_crystal.pdbx_crystal_image_format . _exptl_crystal.pdbx_mosaicity . _exptl_crystal.pdbx_mosaicity_esd . # _exptl_crystal_grow.apparatus . _exptl_crystal_grow.atmosphere . _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details . _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref . _exptl_crystal_grow.pH . _exptl_crystal_grow.pressure . _exptl_crystal_grow.pressure_esd . _exptl_crystal_grow.seeding . _exptl_crystal_grow.seeding_ref . _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details . _exptl_crystal_grow.temp_esd . _exptl_crystal_grow.time . _exptl_crystal_grow.pdbx_details ;1:1 (vol.) mixture of OG-bound Rocker (1 mM peptide, 1 mM CoSO4, 50 mM OG) and the well solution (360 mM LiCl, 100 mM sodium citrate (pH 5.6), 28 % (w/v) PEG 400, 1.56M 1,2-hexanedediol) inverted above the well solution and incubated at room temperature over 2.5 weeks ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.ambient_environment . _diffrn.ambient_temp 100 _diffrn.ambient_temp_details . _diffrn.ambient_temp_esd . _diffrn.crystal_id 1 _diffrn.crystal_support . _diffrn.crystal_treatment . _diffrn.details . _diffrn.id 1 _diffrn.ambient_pressure . _diffrn.ambient_pressure_esd . _diffrn.ambient_pressure_gt . _diffrn.ambient_pressure_lt . _diffrn.ambient_temp_gt . _diffrn.ambient_temp_lt . # _diffrn_detector.details . _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean . _diffrn_detector.dtime . _diffrn_detector.pdbx_frames_total . _diffrn_detector.pdbx_collection_time_total . _diffrn_detector.pdbx_collection_date 2011-08-08 # _diffrn_radiation.collimation . _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge . _diffrn_radiation.inhomogeneity . _diffrn_radiation.monochromator . _diffrn_radiation.polarisn_norm . _diffrn_radiation.polarisn_ratio . _diffrn_radiation.probe . _diffrn_radiation.type . _diffrn_radiation.xray_symbol . _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list . _diffrn_radiation.pdbx_wavelength . _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer . _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.115869 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current . _diffrn_source.details . _diffrn_source.diffrn_id 1 _diffrn_source.power . _diffrn_source.size . _diffrn_source.source SYNCHROTRON _diffrn_source.target . _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.voltage . _diffrn_source.take-off_angle . _diffrn_source.pdbx_wavelength_list 1.115869 _diffrn_source.pdbx_wavelength . _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_synchrotron_site ALS # _reflns.B_iso_Wilson_estimate . _reflns.entry_id 4P6L _reflns.data_reduction_details . _reflns.data_reduction_method . _reflns.d_resolution_high 2.8 _reflns.d_resolution_low 61.6 _reflns.details . _reflns.limit_h_max . _reflns.limit_h_min . _reflns.limit_k_max . _reflns.limit_k_min . _reflns.limit_l_max . _reflns.limit_l_min . _reflns.number_all . _reflns.number_obs 2699 _reflns.observed_criterion . _reflns.observed_criterion_F_max . _reflns.observed_criterion_F_min . _reflns.observed_criterion_I_max . _reflns.observed_criterion_I_min . _reflns.observed_criterion_sigma_F . _reflns.observed_criterion_sigma_I . _reflns.percent_possible_obs 95.5 _reflns.R_free_details . _reflns.Rmerge_F_all . _reflns.Rmerge_F_obs . _reflns.Friedel_coverage . _reflns.number_gt . _reflns.threshold_expression . _reflns.pdbx_redundancy 6.3 _reflns.pdbx_Rmerge_I_obs . _reflns.pdbx_Rmerge_I_all . _reflns.pdbx_Rsym_value . _reflns.pdbx_netI_over_av_sigmaI . _reflns.pdbx_netI_over_sigmaI 13.5 _reflns.pdbx_res_netI_over_av_sigmaI_2 . _reflns.pdbx_res_netI_over_sigmaI_2 . _reflns.pdbx_chi_squared . _reflns.pdbx_scaling_rejects . _reflns.pdbx_d_res_high_opt . _reflns.pdbx_d_res_low_opt . _reflns.pdbx_d_res_opt_method . _reflns.phase_calculation_details . _reflns.pdbx_Rrim_I_all . _reflns.pdbx_Rpim_I_all . _reflns.pdbx_d_opt . _reflns.pdbx_number_measured_all . _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.aniso_B[1][1] . _refine.aniso_B[1][2] . _refine.aniso_B[1][3] . _refine.aniso_B[2][2] . _refine.aniso_B[2][3] . _refine.aniso_B[3][3] . _refine.B_iso_max . _refine.B_iso_mean . _refine.B_iso_min . _refine.correlation_coeff_Fo_to_Fc . _refine.correlation_coeff_Fo_to_Fc_free . _refine.details . _refine.diff_density_max . _refine.diff_density_max_esd . _refine.diff_density_min . _refine.diff_density_min_esd . _refine.diff_density_rms . _refine.diff_density_rms_esd . _refine.entry_id 4P6L _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details . _refine.ls_abs_structure_Flack . _refine.ls_abs_structure_Flack_esd . _refine.ls_abs_structure_Rogers . _refine.ls_abs_structure_Rogers_esd . _refine.ls_d_res_high 2.803 _refine.ls_d_res_low 43.560 _refine.ls_extinction_coef . _refine.ls_extinction_coef_esd . _refine.ls_extinction_expression . _refine.ls_extinction_method . _refine.ls_goodness_of_fit_all . _refine.ls_goodness_of_fit_all_esd . _refine.ls_goodness_of_fit_obs . _refine.ls_goodness_of_fit_obs_esd . _refine.ls_hydrogen_treatment . _refine.ls_matrix_type . _refine.ls_number_constraints . _refine.ls_number_parameters . _refine.ls_number_reflns_all . _refine.ls_number_reflns_obs 2598 _refine.ls_number_reflns_R_free 261 _refine.ls_number_reflns_R_work . _refine.ls_number_restraints . _refine.ls_percent_reflns_obs 92.10 _refine.ls_percent_reflns_R_free 10.05 _refine.ls_R_factor_all . _refine.ls_R_factor_obs 0.2942 _refine.ls_R_factor_R_free 0.3032 _refine.ls_R_factor_R_free_error . _refine.ls_R_factor_R_free_error_details . _refine.ls_R_factor_R_work 0.2924 _refine.ls_R_Fsqd_factor_obs . _refine.ls_R_I_factor_obs . _refine.ls_redundancy_reflns_all . _refine.ls_redundancy_reflns_obs . _refine.ls_restrained_S_all . _refine.ls_restrained_S_obs . _refine.ls_shift_over_esd_max . _refine.ls_shift_over_esd_mean . _refine.ls_structure_factor_coef . _refine.ls_weighting_details . _refine.ls_weighting_scheme . _refine.ls_wR_factor_all . _refine.ls_wR_factor_obs . _refine.ls_wR_factor_R_free . _refine.ls_wR_factor_R_work . _refine.occupancy_max . _refine.occupancy_min . _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol . _refine.solvent_model_param_ksol . _refine.ls_R_factor_gt . _refine.ls_goodness_of_fit_gt . _refine.ls_goodness_of_fit_ref . _refine.ls_shift_over_su_max . _refine.ls_shift_over_su_max_lt . _refine.ls_shift_over_su_mean . _refine.ls_shift_over_su_mean_lt . _refine.pdbx_ls_sigma_I . _refine.pdbx_ls_sigma_F 0.00 _refine.pdbx_ls_sigma_Fsqd . _refine.pdbx_data_cutoff_high_absF . _refine.pdbx_data_cutoff_high_rms_absF . _refine.pdbx_data_cutoff_low_absF . _refine.pdbx_isotropic_thermal_model . _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_starting_model . _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details . _refine.pdbx_stereochem_target_val_spec_case . _refine.pdbx_overall_ESU_R . _refine.pdbx_overall_ESU_R_Free . _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii . _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R . _refine.pdbx_density_correlation . _refine.pdbx_pd_number_of_powder_patterns . _refine.pdbx_pd_number_of_points . _refine.pdbx_pd_meas_number_of_points . _refine.pdbx_pd_proc_ls_prof_R_factor . _refine.pdbx_pd_proc_ls_prof_wR_factor . _refine.pdbx_pd_Marquardt_correlation_coeff . _refine.pdbx_pd_Fsqrd_R_factor . _refine.pdbx_pd_ls_matrix_band_width . _refine.pdbx_overall_phase_error 41.01 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI . _refine.pdbx_overall_SU_R_free_Blow_DPI . _refine.pdbx_overall_SU_R_Blow_DPI . _refine.pdbx_TLS_residual_ADP_flag . _refine.pdbx_diffrn_id 1 _refine.overall_SU_B . _refine.overall_SU_ML 0.48 _refine.overall_SU_R_Cruickshank_DPI . _refine.overall_SU_R_free . _refine.overall_FOM_free_R_set . _refine.overall_FOM_work_R_set . # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 422 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 422 _refine_hist.d_res_high 2.803 _refine_hist.d_res_low 43.560 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' . 0.002 . 434 . f_bond_d . . 'X-RAY DIFFRACTION' . 0.399 . 588 . f_angle_d . . 'X-RAY DIFFRACTION' . 10.225 . 144 . f_dihedral_angle_d . . 'X-RAY DIFFRACTION' . 0.017 . 64 . f_chiral_restr . . 'X-RAY DIFFRACTION' . 0.001 . 70 . f_plane_restr . . # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error 'X-RAY DIFFRACTION' 2.8030 3.5313 . . 123 1131 90.00 . . . 0.4069 . 0.3622 . . . . . . . . 'X-RAY DIFFRACTION' 3.5313 43.5652 . . 138 1206 94.00 . . . 0.2826 . 0.2781 . . . . . . . . # _struct.entry_id 4P6L _struct.title 'Crystal Structure of the Computationally Designed Transmembrane Metallotransporter in Octyl Glucoside' _struct.pdbx_model_details . _struct.pdbx_formula_weight . _struct.pdbx_formula_weight_method . _struct.pdbx_model_type_details . _struct.pdbx_CASP_flag . # _struct_keywords.entry_id 4P6L _struct_keywords.text 'transmembrane, transporter, de-novo designed, DE NOVO PROTEIN' _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4P6L _struct_ref.pdbx_db_accession 4P6L _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4P6L A 1 ? 26 ? 4P6L 1 ? 26 ? 1 26 2 1 4P6L B 1 ? 26 ? 4P6L 1 ? 26 ? 1 26 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1360 ? 1 MORE -11 ? 1 'SSA (A^2)' 4210 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_assembly_auth_evidence.id 1 _pdbx_struct_assembly_auth_evidence.assembly_id 1 _pdbx_struct_assembly_auth_evidence.experimental_support 'equilibrium centrifugation' _pdbx_struct_assembly_auth_evidence.details ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.details ;THE BIOLOGICAL UNIT WAS DETERMINED BY COMBINED APPROACH OF COMPUTATIONAL DESIGN, ANALYTICAL ULTRACENTRIFUGATION AND 19F-CODEX VIA SOLID-STATE NMR. AS PER THE AUTHORS THIS TETRAMERIC ASSEMBLY IS REPORTED IN THE SEPARATE ENTRY (PDB ID: 2MUZ) FOR THE SOLID-STATE NMR MODEL ACCOMPANIED BY THE PAPER THAT CITES THIS PDB ; _struct_biol.id 1 _struct_biol.pdbx_aggregation_state TETRAMER _struct_biol.pdbx_assembly_method 'SS-NMR 19F-CODEX' _struct_biol.pdbx_formula_weight ? _struct_biol.pdbx_formula_weight_method ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 TYR A 1 ? TYR A 25 ? TYR A 1 TYR A 25 1 ? 25 HELX_P HELX_P2 AA2 TYR B 2 ? TYR B 25 ? TYR B 2 TYR B 25 1 ? 24 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A TYR 25 C ? ? ? 1_555 A NH2 26 N ? ? A TYR 25 A NH2 26 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? B TYR 25 C ? ? ? 1_555 B NH2 26 N ? ? B TYR 25 B NH2 26 1_555 ? ? ? ? ? ? ? 1.329 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 NH2 A 26 ? TYR A 25 ? NH2 A 26 ? 1_555 TYR A 25 ? 1_555 . . TYR 5 NH2 None 'Terminal amidation' 2 NH2 B 26 ? TYR B 25 ? NH2 B 26 ? 1_555 TYR B 25 ? 1_555 . . TYR 5 NH2 None 'Terminal amidation' # _pdbx_entry_details.entry_id 4P6L _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 GLU N N N N 41 GLU CA C N S 42 GLU C C N N 43 GLU O O N N 44 GLU CB C N N 45 GLU CG C N N 46 GLU CD C N N 47 GLU OE1 O N N 48 GLU OE2 O N N 49 GLU OXT O N N 50 GLU H H N N 51 GLU H2 H N N 52 GLU HA H N N 53 GLU HB2 H N N 54 GLU HB3 H N N 55 GLU HG2 H N N 56 GLU HG3 H N N 57 GLU HE2 H N N 58 GLU HXT H N N 59 HIS N N N N 60 HIS CA C N S 61 HIS C C N N 62 HIS O O N N 63 HIS CB C N N 64 HIS CG C Y N 65 HIS ND1 N Y N 66 HIS CD2 C Y N 67 HIS CE1 C Y N 68 HIS NE2 N Y N 69 HIS OXT O N N 70 HIS H H N N 71 HIS H2 H N N 72 HIS HA H N N 73 HIS HB2 H N N 74 HIS HB3 H N N 75 HIS HD1 H N N 76 HIS HD2 H N N 77 HIS HE1 H N N 78 HIS HE2 H N N 79 HIS HXT H N N 80 ILE N N N N 81 ILE CA C N S 82 ILE C C N N 83 ILE O O N N 84 ILE CB C N S 85 ILE CG1 C N N 86 ILE CG2 C N N 87 ILE CD1 C N N 88 ILE OXT O N N 89 ILE H H N N 90 ILE H2 H N N 91 ILE HA H N N 92 ILE HB H N N 93 ILE HG12 H N N 94 ILE HG13 H N N 95 ILE HG21 H N N 96 ILE HG22 H N N 97 ILE HG23 H N N 98 ILE HD11 H N N 99 ILE HD12 H N N 100 ILE HD13 H N N 101 ILE HXT H N N 102 LEU N N N N 103 LEU CA C N S 104 LEU C C N N 105 LEU O O N N 106 LEU CB C N N 107 LEU CG C N N 108 LEU CD1 C N N 109 LEU CD2 C N N 110 LEU OXT O N N 111 LEU H H N N 112 LEU H2 H N N 113 LEU HA H N N 114 LEU HB2 H N N 115 LEU HB3 H N N 116 LEU HG H N N 117 LEU HD11 H N N 118 LEU HD12 H N N 119 LEU HD13 H N N 120 LEU HD21 H N N 121 LEU HD22 H N N 122 LEU HD23 H N N 123 LEU HXT H N N 124 LYS N N N N 125 LYS CA C N S 126 LYS C C N N 127 LYS O O N N 128 LYS CB C N N 129 LYS CG C N N 130 LYS CD C N N 131 LYS CE C N N 132 LYS NZ N N N 133 LYS OXT O N N 134 LYS H H N N 135 LYS H2 H N N 136 LYS HA H N N 137 LYS HB2 H N N 138 LYS HB3 H N N 139 LYS HG2 H N N 140 LYS HG3 H N N 141 LYS HD2 H N N 142 LYS HD3 H N N 143 LYS HE2 H N N 144 LYS HE3 H N N 145 LYS HZ1 H N N 146 LYS HZ2 H N N 147 LYS HZ3 H N N 148 LYS HXT H N N 149 NH2 N N N N 150 NH2 HN1 H N N 151 NH2 HN2 H N N 152 PHE N N N N 153 PHE CA C N S 154 PHE C C N N 155 PHE O O N N 156 PHE CB C N N 157 PHE CG C Y N 158 PHE CD1 C Y N 159 PHE CD2 C Y N 160 PHE CE1 C Y N 161 PHE CE2 C Y N 162 PHE CZ C Y N 163 PHE OXT O N N 164 PHE H H N N 165 PHE H2 H N N 166 PHE HA H N N 167 PHE HB2 H N N 168 PHE HB3 H N N 169 PHE HD1 H N N 170 PHE HD2 H N N 171 PHE HE1 H N N 172 PHE HE2 H N N 173 PHE HZ H N N 174 PHE HXT H N N 175 SER N N N N 176 SER CA C N S 177 SER C C N N 178 SER O O N N 179 SER CB C N N 180 SER OG O N N 181 SER OXT O N N 182 SER H H N N 183 SER H2 H N N 184 SER HA H N N 185 SER HB2 H N N 186 SER HB3 H N N 187 SER HG H N N 188 SER HXT H N N 189 TYR N N N N 190 TYR CA C N S 191 TYR C C N N 192 TYR O O N N 193 TYR CB C N N 194 TYR CG C Y N 195 TYR CD1 C Y N 196 TYR CD2 C Y N 197 TYR CE1 C Y N 198 TYR CE2 C Y N 199 TYR CZ C Y N 200 TYR OH O N N 201 TYR OXT O N N 202 TYR H H N N 203 TYR H2 H N N 204 TYR HA H N N 205 TYR HB2 H N N 206 TYR HB3 H N N 207 TYR HD1 H N N 208 TYR HD2 H N N 209 TYR HE1 H N N 210 TYR HE2 H N N 211 TYR HH H N N 212 TYR HXT H N N 213 VAL N N N N 214 VAL CA C N S 215 VAL C C N N 216 VAL O O N N 217 VAL CB C N N 218 VAL CG1 C N N 219 VAL CG2 C N N 220 VAL OXT O N N 221 VAL H H N N 222 VAL H2 H N N 223 VAL HA H N N 224 VAL HB H N N 225 VAL HG11 H N N 226 VAL HG12 H N N 227 VAL HG13 H N N 228 VAL HG21 H N N 229 VAL HG22 H N N 230 VAL HG23 H N N 231 VAL HXT H N N 232 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 GLU N CA sing N N 39 GLU N H sing N N 40 GLU N H2 sing N N 41 GLU CA C sing N N 42 GLU CA CB sing N N 43 GLU CA HA sing N N 44 GLU C O doub N N 45 GLU C OXT sing N N 46 GLU CB CG sing N N 47 GLU CB HB2 sing N N 48 GLU CB HB3 sing N N 49 GLU CG CD sing N N 50 GLU CG HG2 sing N N 51 GLU CG HG3 sing N N 52 GLU CD OE1 doub N N 53 GLU CD OE2 sing N N 54 GLU OE2 HE2 sing N N 55 GLU OXT HXT sing N N 56 HIS N CA sing N N 57 HIS N H sing N N 58 HIS N H2 sing N N 59 HIS CA C sing N N 60 HIS CA CB sing N N 61 HIS CA HA sing N N 62 HIS C O doub N N 63 HIS C OXT sing N N 64 HIS CB CG sing N N 65 HIS CB HB2 sing N N 66 HIS CB HB3 sing N N 67 HIS CG ND1 sing Y N 68 HIS CG CD2 doub Y N 69 HIS ND1 CE1 doub Y N 70 HIS ND1 HD1 sing N N 71 HIS CD2 NE2 sing Y N 72 HIS CD2 HD2 sing N N 73 HIS CE1 NE2 sing Y N 74 HIS CE1 HE1 sing N N 75 HIS NE2 HE2 sing N N 76 HIS OXT HXT sing N N 77 ILE N CA sing N N 78 ILE N H sing N N 79 ILE N H2 sing N N 80 ILE CA C sing N N 81 ILE CA CB sing N N 82 ILE CA HA sing N N 83 ILE C O doub N N 84 ILE C OXT sing N N 85 ILE CB CG1 sing N N 86 ILE CB CG2 sing N N 87 ILE CB HB sing N N 88 ILE CG1 CD1 sing N N 89 ILE CG1 HG12 sing N N 90 ILE CG1 HG13 sing N N 91 ILE CG2 HG21 sing N N 92 ILE CG2 HG22 sing N N 93 ILE CG2 HG23 sing N N 94 ILE CD1 HD11 sing N N 95 ILE CD1 HD12 sing N N 96 ILE CD1 HD13 sing N N 97 ILE OXT HXT sing N N 98 LEU N CA sing N N 99 LEU N H sing N N 100 LEU N H2 sing N N 101 LEU CA C sing N N 102 LEU CA CB sing N N 103 LEU CA HA sing N N 104 LEU C O doub N N 105 LEU C OXT sing N N 106 LEU CB CG sing N N 107 LEU CB HB2 sing N N 108 LEU CB HB3 sing N N 109 LEU CG CD1 sing N N 110 LEU CG CD2 sing N N 111 LEU CG HG sing N N 112 LEU CD1 HD11 sing N N 113 LEU CD1 HD12 sing N N 114 LEU CD1 HD13 sing N N 115 LEU CD2 HD21 sing N N 116 LEU CD2 HD22 sing N N 117 LEU CD2 HD23 sing N N 118 LEU OXT HXT sing N N 119 LYS N CA sing N N 120 LYS N H sing N N 121 LYS N H2 sing N N 122 LYS CA C sing N N 123 LYS CA CB sing N N 124 LYS CA HA sing N N 125 LYS C O doub N N 126 LYS C OXT sing N N 127 LYS CB CG sing N N 128 LYS CB HB2 sing N N 129 LYS CB HB3 sing N N 130 LYS CG CD sing N N 131 LYS CG HG2 sing N N 132 LYS CG HG3 sing N N 133 LYS CD CE sing N N 134 LYS CD HD2 sing N N 135 LYS CD HD3 sing N N 136 LYS CE NZ sing N N 137 LYS CE HE2 sing N N 138 LYS CE HE3 sing N N 139 LYS NZ HZ1 sing N N 140 LYS NZ HZ2 sing N N 141 LYS NZ HZ3 sing N N 142 LYS OXT HXT sing N N 143 NH2 N HN1 sing N N 144 NH2 N HN2 sing N N 145 PHE N CA sing N N 146 PHE N H sing N N 147 PHE N H2 sing N N 148 PHE CA C sing N N 149 PHE CA CB sing N N 150 PHE CA HA sing N N 151 PHE C O doub N N 152 PHE C OXT sing N N 153 PHE CB CG sing N N 154 PHE CB HB2 sing N N 155 PHE CB HB3 sing N N 156 PHE CG CD1 doub Y N 157 PHE CG CD2 sing Y N 158 PHE CD1 CE1 sing Y N 159 PHE CD1 HD1 sing N N 160 PHE CD2 CE2 doub Y N 161 PHE CD2 HD2 sing N N 162 PHE CE1 CZ doub Y N 163 PHE CE1 HE1 sing N N 164 PHE CE2 CZ sing Y N 165 PHE CE2 HE2 sing N N 166 PHE CZ HZ sing N N 167 PHE OXT HXT sing N N 168 SER N CA sing N N 169 SER N H sing N N 170 SER N H2 sing N N 171 SER CA C sing N N 172 SER CA CB sing N N 173 SER CA HA sing N N 174 SER C O doub N N 175 SER C OXT sing N N 176 SER CB OG sing N N 177 SER CB HB2 sing N N 178 SER CB HB3 sing N N 179 SER OG HG sing N N 180 SER OXT HXT sing N N 181 TYR N CA sing N N 182 TYR N H sing N N 183 TYR N H2 sing N N 184 TYR CA C sing N N 185 TYR CA CB sing N N 186 TYR CA HA sing N N 187 TYR C O doub N N 188 TYR C OXT sing N N 189 TYR CB CG sing N N 190 TYR CB HB2 sing N N 191 TYR CB HB3 sing N N 192 TYR CG CD1 doub Y N 193 TYR CG CD2 sing Y N 194 TYR CD1 CE1 sing Y N 195 TYR CD1 HD1 sing N N 196 TYR CD2 CE2 doub Y N 197 TYR CD2 HD2 sing N N 198 TYR CE1 CZ doub Y N 199 TYR CE1 HE1 sing N N 200 TYR CE2 CZ sing Y N 201 TYR CE2 HE2 sing N N 202 TYR CZ OH sing N N 203 TYR OH HH sing N N 204 TYR OXT HXT sing N N 205 VAL N CA sing N N 206 VAL N H sing N N 207 VAL N H2 sing N N 208 VAL CA C sing N N 209 VAL CA CB sing N N 210 VAL CA HA sing N N 211 VAL C O doub N N 212 VAL C OXT sing N N 213 VAL CB CG1 sing N N 214 VAL CB CG2 sing N N 215 VAL CB HB sing N N 216 VAL CG1 HG11 sing N N 217 VAL CG1 HG12 sing N N 218 VAL CG1 HG13 sing N N 219 VAL CG2 HG21 sing N N 220 VAL CG2 HG22 sing N N 221 VAL CG2 HG23 sing N N 222 VAL OXT HXT sing N N 223 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' 'United States' 7U01AI074571 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' 3F32GM096727 2 # _atom_sites.entry_id 4P6L _atom_sites.fract_transf_matrix[1][1] 0.011478 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011478 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011478 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O # loop_