HEADER OXIDOREDUCTASE 25-MAR-14 4P6V OBSLTE 12-JUL-23 4P6V 8ACY TITLE CRYSTAL STRUCTURE OF THE NA+-TRANSLOCATING NADH: UBIQUINONE TITLE 2 OXIDOREDUCTASE FROM VIBRIO CHOLERAE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT A; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NA(+)-TRANSLOCATING NQR SUBUNIT A,NQR COMPLEX SUBUNIT A,NQR- COMPND 5 1 SUBUNIT A; COMPND 6 EC: 1.6.5.-; COMPND 7 ENGINEERED: YES; COMPND 8 OTHER_DETAILS: HIS6-TAG WAS CLEAVED OFF BY HRV-3C PROTEASE.; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT B; COMPND 11 CHAIN: B; COMPND 12 SYNONYM: NA(+)-TRANSLOCATING NQR SUBUNIT B,NQR COMPLEX SUBUNIT B,NQR- COMPND 13 1 SUBUNIT B; COMPND 14 EC: 1.6.5.-; COMPND 15 ENGINEERED: YES; COMPND 16 OTHER_DETAILS: CONTAINS FMN COVALENTLY BOUND TO THREONIN 236.; COMPND 17 MOL_ID: 3; COMPND 18 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT C; COMPND 19 CHAIN: C; COMPND 20 SYNONYM: NA(+)-TRANSLOCATING NQR SUBUNIT C,NQR COMPLEX SUBUNIT C,NQR- COMPND 21 1 SUBUNIT C; COMPND 22 EC: 1.6.5.-; COMPND 23 ENGINEERED: YES; COMPND 24 OTHER_DETAILS: CONTAINS FMN COVALENTLY BOUND TO THREONIN 225.; COMPND 25 MOL_ID: 4; COMPND 26 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT D; COMPND 27 CHAIN: D; COMPND 28 SYNONYM: NA(+)-TRANSLOCATING NQR SUBUNIT D,NQR COMPLEX SUBUNIT D,NQR- COMPND 29 1 SUBUNIT D; COMPND 30 EC: 1.6.5.-; COMPND 31 ENGINEERED: YES; COMPND 32 MOL_ID: 5; COMPND 33 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT E; COMPND 34 CHAIN: E; COMPND 35 SYNONYM: NA(+)-TRANSLOCATING NQR SUBUNIT E,NQR COMPLEX SUBUNIT E,NQR- COMPND 36 1 SUBUNIT E; COMPND 37 EC: 1.6.5.-; COMPND 38 ENGINEERED: YES; COMPND 39 MOL_ID: 6; COMPND 40 MOLECULE: NA(+)-TRANSLOCATING NADH-QUINONE REDUCTASE SUBUNIT F; COMPND 41 CHAIN: F; COMPND 42 SYNONYM: NA(+)-TRANSLOCATING NQR SUBUNIT F,NQR COMPLEX SUBUNIT F,NQR- COMPND 43 1 SUBUNIT F; COMPND 44 EC: 1.6.5.-; COMPND 45 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE SEROTYPE O1; SOURCE 3 ORGANISM_TAXID: 243277; SOURCE 4 STRAIN: ATCC 39315 / EL TOR INABA N16961; SOURCE 5 GENE: NQRA, VC_2295; SOURCE 6 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PEC422; SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE SEROTYPE O1; SOURCE 11 ORGANISM_TAXID: 243277; SOURCE 12 STRAIN: ATCC 39315 / EL TOR INABA N16961; SOURCE 13 GENE: NQRB, VC_2294; SOURCE 14 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 15 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 16 EXPRESSION_SYSTEM_PLASMID: PEC422; SOURCE 17 MOL_ID: 3; SOURCE 18 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE SEROTYPE O1; SOURCE 19 ORGANISM_TAXID: 243277; SOURCE 20 STRAIN: ATCC 39315 / EL TOR INABA N16961; SOURCE 21 GENE: NQRC, VC_2293; SOURCE 22 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 23 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 24 MOL_ID: 4; SOURCE 25 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE SEROTYPE O1; SOURCE 26 ORGANISM_TAXID: 243277; SOURCE 27 STRAIN: ATCC 39315 / EL TOR INABA N16961; SOURCE 28 GENE: NQRD, VC_2292; SOURCE 29 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 30 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 31 MOL_ID: 5; SOURCE 32 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE SEROTYPE O1; SOURCE 33 ORGANISM_TAXID: 243277; SOURCE 34 STRAIN: ATCC 39315 / EL TOR INABA N16961; SOURCE 35 GENE: NQRE, VC_2291; SOURCE 36 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 37 EXPRESSION_SYSTEM_TAXID: 666; SOURCE 38 MOL_ID: 6; SOURCE 39 ORGANISM_SCIENTIFIC: VIBRIO CHOLERAE SEROTYPE O1; SOURCE 40 ORGANISM_TAXID: 243277; SOURCE 41 STRAIN: ATCC 39315 / EL TOR INABA N16961; SOURCE 42 GENE: NQRF, VC_2290; SOURCE 43 EXPRESSION_SYSTEM: VIBRIO CHOLERAE; SOURCE 44 EXPRESSION_SYSTEM_TAXID: 666 KEYWDS RESPIRATORY COMPLEX, NADH:UBIQUINONE OXIDOREDUCTASE, SODIUM KEYWDS 2 TRANSLOCATION, FAD, COVALENT FMN, RIBOFLAVIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR J.STEUBER,M.S.CASUTT,G.VOHL,T.VORBURGER,K.DIEDERICHS,G.FRITZ REVDAT 5 12-JUL-23 4P6V 1 OBSLTE REMARK LINK REVDAT 4 08-JAN-20 4P6V 1 REMARK REVDAT 3 27-SEP-17 4P6V 1 SOURCE JRNL REMARK REVDAT 2 24-DEC-14 4P6V 1 JRNL REVDAT 1 03-DEC-14 4P6V 0 JRNL AUTH J.STEUBER,G.VOHL,M.S.CASUTT,T.VORBURGER,K.DIEDERICHS,G.FRITZ JRNL TITL STRUCTURE OF THE V. CHOLERAE NA+-PUMPING NADH:QUINONE JRNL TITL 2 OXIDOREDUCTASE. JRNL REF NATURE V. 516 62 2014 JRNL REFN ESSN 1476-4687 JRNL PMID 25471880 JRNL DOI 10.1038/NATURE14003 REMARK 2 REMARK 2 RESOLUTION. 3.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.9_1692) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 33051 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.248 REMARK 3 R VALUE (WORKING SET) : 0.246 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.880 REMARK 3 FREE R VALUE TEST SET COUNT : 1943 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.9799 - 8.3374 1.00 2259 144 0.2368 0.2421 REMARK 3 2 8.3374 - 6.6589 1.00 2246 132 0.2423 0.2462 REMARK 3 3 6.6589 - 5.8294 1.00 2234 148 0.2465 0.2641 REMARK 3 4 5.8294 - 5.3019 1.00 2219 138 0.2366 0.3070 REMARK 3 5 5.3019 - 4.9250 1.00 2194 156 0.2356 0.2876 REMARK 3 6 4.9250 - 4.6366 1.00 2251 136 0.2196 0.2424 REMARK 3 7 4.6366 - 4.4057 1.00 2209 142 0.2281 0.2879 REMARK 3 8 4.4057 - 4.2149 1.00 2214 120 0.2387 0.3215 REMARK 3 9 4.2149 - 4.0533 1.00 2215 138 0.2540 0.3036 REMARK 3 10 4.0533 - 3.9140 1.00 2218 139 0.2610 0.3307 REMARK 3 11 3.9140 - 3.7921 1.00 2232 127 0.2851 0.3735 REMARK 3 12 3.7921 - 3.6840 1.00 2192 153 0.3068 0.3548 REMARK 3 13 3.6840 - 3.5873 1.00 2198 136 0.3407 0.3890 REMARK 3 14 3.5873 - 3.5000 1.00 2227 134 0.3583 0.3810 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.630 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 13925 REMARK 3 ANGLE : 1.121 18899 REMARK 3 CHIRALITY : 0.045 2163 REMARK 3 PLANARITY : 0.006 2374 REMARK 3 DIHEDRAL : 17.309 4921 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4P6V COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000200817. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-NOV-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XDS, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33122 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.500 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.800 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 13.66 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.8700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.70 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 14.04 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 0.860 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER, DM REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG2000 MME, 0.2 M KSCN, 0.1 M REMARK 280 TRIS-ACETATE PH 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 71.69000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 20360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 73100 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -205.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 PRO A -1 REMARK 465 HIS A 0 REMARK 465 ARG A 330 REMARK 465 ASP A 331 REMARK 465 LYS A 332 REMARK 465 GLU A 333 REMARK 465 LEU A 334 REMARK 465 PHE A 335 REMARK 465 GLY A 336 REMARK 465 TRP A 337 REMARK 465 ALA A 338 REMARK 465 MET A 339 REMARK 465 PRO A 340 REMARK 465 GLY A 341 REMARK 465 LYS A 342 REMARK 465 ASN A 343 REMARK 465 LYS A 344 REMARK 465 PHE A 345 REMARK 465 SER A 346 REMARK 465 VAL A 347 REMARK 465 THR A 348 REMARK 465 ARG A 349 REMARK 465 SER A 350 REMARK 465 PHE A 351 REMARK 465 LEU A 352 REMARK 465 GLY A 353 REMARK 465 HIS A 354 REMARK 465 LEU A 355 REMARK 465 PHE A 356 REMARK 465 LYS A 357 REMARK 465 GLY A 358 REMARK 465 GLN A 359 REMARK 465 VAL A 360 REMARK 465 TYR A 361 REMARK 465 ASN A 362 REMARK 465 MET A 363 REMARK 465 THR A 364 REMARK 465 THR A 365 REMARK 465 THR A 366 REMARK 465 THR A 367 REMARK 465 ASN A 368 REMARK 465 GLY A 369 REMARK 465 SER A 370 REMARK 465 ASP A 371 REMARK 465 ARG A 372 REMARK 465 SER A 373 REMARK 465 MET A 374 REMARK 465 VAL A 375 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 LEU B 3 REMARK 465 LYS B 4 REMARK 465 LYS B 5 REMARK 465 PHE B 6 REMARK 465 LEU B 7 REMARK 465 GLU B 8 REMARK 465 ASP B 9 REMARK 465 ILE B 10 REMARK 465 GLU B 11 REMARK 465 HIS B 12 REMARK 465 HIS B 13 REMARK 465 PHE B 14 REMARK 465 GLU B 15 REMARK 465 PRO B 16 REMARK 465 GLY B 17 REMARK 465 GLY B 18 REMARK 465 LYS B 19 REMARK 465 HIS B 20 REMARK 465 GLU B 21 REMARK 465 LYS B 22 REMARK 465 TRP B 23 REMARK 465 PHE B 24 REMARK 465 ALA B 25 REMARK 465 LEU B 26 REMARK 465 TYR B 27 REMARK 465 GLU B 28 REMARK 465 ALA B 29 REMARK 465 ALA B 30 REMARK 465 ALA B 31 REMARK 465 THR B 32 REMARK 465 LEU B 33 REMARK 465 PHE B 34 REMARK 465 TYR B 35 REMARK 465 THR B 36 REMARK 465 PRO B 37 REMARK 465 SER B 113 REMARK 465 SER B 114 REMARK 465 ASP B 115 REMARK 465 ALA B 116 REMARK 465 GLY B 117 REMARK 465 TRP B 118 REMARK 465 ASN B 251 REMARK 465 ASN B 252 REMARK 465 ALA B 253 REMARK 465 THR B 254 REMARK 465 GLY B 255 REMARK 465 GLN B 256 REMARK 465 THR B 257 REMARK 465 ILE B 258 REMARK 465 THR B 259 REMARK 465 TRP B 260 REMARK 465 MET B 261 REMARK 465 ASP B 262 REMARK 465 ALA B 263 REMARK 465 PHE B 264 REMARK 465 ILE B 265 REMARK 465 GLY B 266 REMARK 465 TRP B 327 REMARK 465 HIS B 328 REMARK 465 ALA B 410 REMARK 465 ARG B 411 REMARK 465 TYR B 412 REMARK 465 GLY B 413 REMARK 465 LYS B 414 REMARK 465 GLN B 415 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 SER C 3 REMARK 465 ASN C 4 REMARK 465 ASN C 5 REMARK 465 ASN C 257 REMARK 465 MET D 1 REMARK 465 SER D 2 REMARK 465 SER D 3 REMARK 465 ALA D 4 REMARK 465 LYS D 5 REMARK 465 GLU D 6 REMARK 465 HIS D 65 REMARK 465 ILE D 66 REMARK 465 PRO D 67 REMARK 465 ASN D 68 REMARK 465 SER D 69 REMARK 465 ALA D 92 REMARK 465 TYR D 93 REMARK 465 LEU D 94 REMARK 465 TYR D 95 REMARK 465 MET D 123 REMARK 465 LYS D 124 REMARK 465 SER D 125 REMARK 465 GLU D 126 REMARK 465 PRO D 167 REMARK 465 LEU D 168 REMARK 465 ILE D 169 REMARK 465 SER D 170 REMARK 465 ASN D 171 REMARK 465 GLY D 172 REMARK 465 GLY D 173 REMARK 465 TRP D 174 REMARK 465 TYR D 175 REMARK 465 GLN D 176 REMARK 465 LYS D 209 REMARK 465 GLU D 210 REMARK 465 MET E 1 REMARK 465 GLU E 2 REMARK 465 HIS E 3 REMARK 465 GLY E 72 REMARK 465 VAL E 73 REMARK 465 ASP E 74 REMARK 465 LEU E 75 REMARK 465 SER E 76 REMARK 465 LEU E 198 REMARK 465 MET F 1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 84 CG CD CE NZ REMARK 470 LYS A 308 CG CD CE NZ REMARK 470 LYS B 42 CG CD CE NZ REMARK 470 SER B 88 OG REMARK 470 ASP B 90 CG OD1 OD2 REMARK 470 GLN B 91 CG CD OE1 NE2 REMARK 470 LEU B 92 CG CD1 CD2 REMARK 470 LYS B 121 CG CD CE NZ REMARK 470 ARG B 199 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 267 CG OD1 ND2 REMARK 470 ILE B 268 CG1 CG2 CD1 REMARK 470 PRO B 269 CG CD REMARK 470 SER B 271 OG REMARK 470 ILE B 272 CG1 CG2 CD1 REMARK 470 LYS D 37 CG CD CE NZ REMARK 470 ASN D 64 CG OD1 ND2 REMARK 470 LYS D 91 CG CD CE NZ REMARK 470 LYS D 99 CG CD CE NZ REMARK 470 ARG D 117 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 207 CG CD OE1 OE2 REMARK 470 PHE E 13 CG CD1 CD2 CE1 CE2 CZ REMARK 470 LYS E 65 CG CD CE NZ REMARK 470 GLU E 71 CG CD OE1 OE2 REMARK 470 LYS F 54 CG CD CE NZ REMARK 470 LYS F 82 CG CD CE NZ REMARK 470 LYS F 132 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE E 28 OG SER E 32 2.17 REMARK 500 O ALA D 77 OG SER D 81 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU D 182 CA - CB - CG ANGL. DEV. = 14.4 DEGREES REMARK 500 LEU E 113 CA - CB - CG ANGL. DEV. = 13.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 11 -135.97 -124.58 REMARK 500 ILE A 12 157.20 84.17 REMARK 500 ALA A 217 146.25 -170.72 REMARK 500 TYR A 228 64.75 -115.75 REMARK 500 PRO A 229 43.19 -75.47 REMARK 500 SER A 231 -86.33 -133.43 REMARK 500 SER A 305 97.51 -167.21 REMARK 500 ASN A 379 28.12 -167.70 REMARK 500 TYR A 380 39.31 -141.31 REMARK 500 PRO A 385 46.93 -83.66 REMARK 500 LEU A 411 -78.79 -54.95 REMARK 500 GLU A 412 19.64 -59.79 REMARK 500 VAL A 424 -142.56 -81.51 REMARK 500 CYS A 425 126.91 64.64 REMARK 500 SER B 44 42.45 -98.68 REMARK 500 SER B 45 95.15 -57.92 REMARK 500 HIS B 46 118.57 -17.18 REMARK 500 SER B 50 -167.60 -67.63 REMARK 500 ASP B 52 -141.06 -147.77 REMARK 500 LEU B 53 -107.69 83.40 REMARK 500 PRO B 172 -175.15 -59.68 REMARK 500 PRO B 175 41.13 -66.50 REMARK 500 LEU B 176 -54.55 59.05 REMARK 500 VAL B 188 -71.17 -73.11 REMARK 500 LYS B 191 -54.15 -144.58 REMARK 500 PHE B 194 -88.37 -92.72 REMARK 500 ARG B 199 -72.26 -52.46 REMARK 500 ASN B 200 100.89 49.80 REMARK 500 ASP B 223 -138.01 64.69 REMARK 500 ALA B 235 6.67 -68.07 REMARK 500 THR B 236 129.82 43.75 REMARK 500 ALA B 248 -169.02 -117.63 REMARK 500 ILE B 292 -156.98 51.23 REMARK 500 SER B 317 57.82 -103.17 REMARK 500 THR B 319 68.84 -58.11 REMARK 500 ASN B 320 -42.83 -156.86 REMARK 500 ALA B 321 -152.87 -131.42 REMARK 500 LEU B 331 24.20 -71.53 REMARK 500 SER B 349 49.92 -96.16 REMARK 500 ALA B 350 -138.84 -124.66 REMARK 500 THR B 353 134.49 66.21 REMARK 500 PRO B 376 -154.57 -67.15 REMARK 500 ALA B 377 -89.74 54.78 REMARK 500 ILE B 405 85.40 -67.31 REMARK 500 SER C 7 2.63 -67.04 REMARK 500 ALA C 29 -61.03 -91.55 REMARK 500 ALA C 30 -71.78 -55.60 REMARK 500 GLN C 116 -49.91 73.48 REMARK 500 ASN C 160 -44.26 -147.77 REMARK 500 LEU C 176 -99.03 -116.37 REMARK 500 REMARK 500 THIS ENTRY HAS 104 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP B 346 PRO B 347 -149.85 REMARK 500 PRO E 103 PRO E 104 149.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE D 301 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 29 SG REMARK 620 2 CYS D 112 SG 154.1 REMARK 620 3 CYS E 26 SG 110.5 81.3 REMARK 620 4 CYS E 120 SG 88.6 114.5 93.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES F 501 FE1 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 70 SG REMARK 620 2 FES F 501 S1 93.3 REMARK 620 3 FES F 501 S2 169.5 90.3 REMARK 620 4 CYS F 76 SG 106.6 106.8 81.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FES F 501 FE2 REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 79 SG REMARK 620 2 FES F 501 S1 151.4 REMARK 620 3 FES F 501 S2 118.0 90.4 REMARK 620 4 CYS F 111 SG 105.1 64.4 98.6 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN B 600 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FMN C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA C 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue RBF E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FES F 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FAD F 502 DBREF 4P6V A 1 446 UNP Q9KPS1 NQRA_VIBCH 1 446 DBREF 4P6V B 1 415 UNP Q9KPS2 NQRB_VIBCH 1 415 DBREF 4P6V C 1 257 UNP P0C6E0 NQRC_VIBCH 1 257 DBREF 4P6V D 1 210 UNP Q9X4Q6 NQRD_VIBCH 1 210 DBREF 4P6V E 1 198 UNP Q9X4Q7 NQRE_VIBCH 1 198 DBREF 4P6V F 1 408 UNP Q9X4Q8 NQRF_VIBCH 1 408 SEQADV 4P6V GLY A -2 UNP Q9KPS1 EXPRESSION TAG SEQADV 4P6V PRO A -1 UNP Q9KPS1 EXPRESSION TAG SEQADV 4P6V HIS A 0 UNP Q9KPS1 EXPRESSION TAG SEQRES 1 A 449 GLY PRO HIS MET ILE THR ILE LYS LYS GLY LEU ASP LEU SEQRES 2 A 449 PRO ILE ALA GLY THR PRO SER GLN VAL ILE SER ASP GLY SEQRES 3 A 449 LYS ALA ILE LYS LYS VAL ALA LEU LEU GLY GLU GLU TYR SEQRES 4 A 449 VAL GLY MET ARG PRO THR MET HIS VAL ARG VAL GLY ASP SEQRES 5 A 449 GLU VAL LYS LYS ALA GLN ILE LEU PHE GLU ASP LYS LYS SEQRES 6 A 449 ASN PRO GLY VAL LYS PHE THR SER PRO VAL SER GLY LYS SEQRES 7 A 449 VAL VAL GLU ILE ASN ARG GLY ALA LYS ARG VAL LEU GLN SEQRES 8 A 449 SER VAL VAL ILE GLU VAL ALA GLY ASP ASP GLN VAL THR SEQRES 9 A 449 PHE ASP LYS PHE GLU ALA ASN GLN LEU ALA SER LEU ASN SEQRES 10 A 449 ARG ASP ALA ILE LYS THR GLN LEU VAL GLU SER GLY LEU SEQRES 11 A 449 TRP THR ALA PHE ARG THR ARG PRO PHE SER LYS VAL PRO SEQRES 12 A 449 ALA ILE ASP SER THR SER GLU ALA ILE PHE VAL THR ALA SEQRES 13 A 449 MET ASP THR ASN PRO LEU ALA ALA GLU PRO THR VAL VAL SEQRES 14 A 449 ILE ASN GLU GLN SER GLU ALA PHE VAL ALA GLY LEU ASP SEQRES 15 A 449 VAL LEU SER ALA LEU THR THR GLY LYS VAL TYR VAL CYS SEQRES 16 A 449 LYS LYS GLY THR SER LEU PRO ARG SER GLN GLN PRO ASN SEQRES 17 A 449 VAL GLU GLU HIS VAL PHE ASP GLY PRO HIS PRO ALA GLY SEQRES 18 A 449 LEU ALA GLY THR HIS MET HIS PHE LEU TYR PRO VAL SER SEQRES 19 A 449 ALA ASP HIS VAL ALA TRP SER ILE ASN TYR GLN ASP VAL SEQRES 20 A 449 ILE ALA VAL GLY GLN LEU PHE LEU THR GLY GLU LEU TYR SEQRES 21 A 449 THR GLN ARG VAL VAL SER LEU ALA GLY PRO VAL VAL ASN SEQRES 22 A 449 LYS PRO ARG LEU VAL ARG THR VAL MET GLY ALA SER LEU SEQRES 23 A 449 GLU GLN LEU VAL ASP SER GLU ILE MET PRO GLY GLU VAL SEQRES 24 A 449 ARG ILE ILE SER GLY SER VAL LEU SER GLY THR LYS ALA SEQRES 25 A 449 THR GLY PRO HIS ALA TYR LEU GLY ARG TYR HIS LEU GLN SEQRES 26 A 449 VAL SER VAL LEU ARG GLU GLY ARG ASP LYS GLU LEU PHE SEQRES 27 A 449 GLY TRP ALA MET PRO GLY LYS ASN LYS PHE SER VAL THR SEQRES 28 A 449 ARG SER PHE LEU GLY HIS LEU PHE LYS GLY GLN VAL TYR SEQRES 29 A 449 ASN MET THR THR THR THR ASN GLY SER ASP ARG SER MET SEQRES 30 A 449 VAL PRO ILE GLY ASN TYR GLU LYS VAL MET PRO LEU ASP SEQRES 31 A 449 MET GLU PRO THR LEU LEU LEU ARG ASP LEU CYS ALA GLY SEQRES 32 A 449 ASP SER ASP SER ALA VAL ARG LEU GLY ALA LEU GLU LEU SEQRES 33 A 449 ASP GLU GLU ASP LEU ALA LEU CYS THR PHE VAL CYS PRO SEQRES 34 A 449 GLY LYS TYR GLU TYR GLY GLN LEU LEU ARG GLU CYS LEU SEQRES 35 A 449 ASP LYS ILE GLU LYS GLU GLY SEQRES 1 B 415 MET GLY LEU LYS LYS PHE LEU GLU ASP ILE GLU HIS HIS SEQRES 2 B 415 PHE GLU PRO GLY GLY LYS HIS GLU LYS TRP PHE ALA LEU SEQRES 3 B 415 TYR GLU ALA ALA ALA THR LEU PHE TYR THR PRO GLY LEU SEQRES 4 B 415 VAL THR LYS ARG SER SER HIS VAL ARG ASP SER VAL ASP SEQRES 5 B 415 LEU LYS ARG ILE MET ILE MET VAL TRP LEU ALA VAL PHE SEQRES 6 B 415 PRO ALA MET PHE TRP GLY MET TYR ASN ALA GLY GLY GLN SEQRES 7 B 415 ALA ILE ALA ALA LEU ASN HIS LEU TYR SER GLY ASP GLN SEQRES 8 B 415 LEU ALA ALA ILE VAL ALA GLY ASN TRP HIS TYR TRP LEU SEQRES 9 B 415 THR GLU MET LEU GLY GLY THR MET SER SER ASP ALA GLY SEQRES 10 B 415 TRP GLY SER LYS MET LEU LEU GLY ALA THR TYR PHE LEU SEQRES 11 B 415 PRO ILE TYR ALA THR VAL PHE ILE VAL GLY GLY PHE TRP SEQRES 12 B 415 GLU VAL LEU PHE CYS MET VAL ARG LYS HIS GLU VAL ASN SEQRES 13 B 415 GLU GLY PHE PHE VAL THR SER ILE LEU PHE ALA LEU ILE SEQRES 14 B 415 VAL PRO PRO THR LEU PRO LEU TRP GLN ALA ALA LEU GLY SEQRES 15 B 415 ILE THR PHE GLY VAL VAL VAL ALA LYS GLU VAL PHE GLY SEQRES 16 B 415 GLY THR GLY ARG ASN PHE LEU ASN PRO ALA LEU ALA GLY SEQRES 17 B 415 ARG ALA PHE LEU PHE PHE ALA TYR PRO ALA GLN ILE SER SEQRES 18 B 415 GLY ASP LEU VAL TRP THR ALA ALA ASP GLY TYR SER GLY SEQRES 19 B 415 ALA THR ALA LEU SER GLN TRP ALA GLN GLY GLY ALA GLY SEQRES 20 B 415 ALA LEU ILE ASN ASN ALA THR GLY GLN THR ILE THR TRP SEQRES 21 B 415 MET ASP ALA PHE ILE GLY ASN ILE PRO GLY SER ILE GLY SEQRES 22 B 415 GLU VAL SER THR LEU ALA LEU MET ILE GLY ALA ALA PHE SEQRES 23 B 415 ILE VAL TYR MET GLY ILE ALA SER TRP ARG ILE ILE GLY SEQRES 24 B 415 GLY VAL MET ILE GLY MET ILE LEU LEU SER THR LEU PHE SEQRES 25 B 415 ASN VAL ILE GLY SER ASP THR ASN ALA MET PHE ASN MET SEQRES 26 B 415 PRO TRP HIS TRP HIS LEU VAL LEU GLY GLY PHE ALA PHE SEQRES 27 B 415 GLY MET PHE PHE MET ALA THR ASP PRO VAL SER ALA SER SEQRES 28 B 415 PHE THR ASN SER GLY LYS TRP ALA TYR GLY ILE LEU ILE SEQRES 29 B 415 GLY VAL MET CYS VAL LEU ILE ARG VAL VAL ASN PRO ALA SEQRES 30 B 415 TYR PRO GLU GLY MET MET LEU ALA ILE LEU PHE ALA ASN SEQRES 31 B 415 LEU PHE ALA PRO LEU PHE ASP HIS VAL VAL VAL GLU ARG SEQRES 32 B 415 ASN ILE LYS ARG ARG LEU ALA ARG TYR GLY LYS GLN SEQRES 1 C 257 MET ALA SER ASN ASN ASP SER ILE LYS LYS THR LEU PHE SEQRES 2 C 257 VAL VAL ILE ALA LEU SER LEU VAL CYS SER ILE ILE VAL SEQRES 3 C 257 SER ALA ALA ALA VAL GLY LEU ARG ASP LYS GLN LYS GLU SEQRES 4 C 257 ASN ALA ALA LEU ASP LYS GLN SER LYS ILE LEU GLN VAL SEQRES 5 C 257 ALA GLY ILE GLU ALA LYS GLY SER LYS GLN ILE VAL GLU SEQRES 6 C 257 LEU PHE ASN LYS SER ILE GLU PRO ARG LEU VAL ASP PHE SEQRES 7 C 257 ASN THR GLY ASP PHE VAL GLU GLY ASP ALA ALA ASN TYR SEQRES 8 C 257 ASP GLN ARG LYS ALA ALA LYS GLU ALA SER GLU SER ILE SEQRES 9 C 257 LYS LEU THR ALA GLU GLN ASP LYS ALA LYS ILE GLN ARG SEQRES 10 C 257 ARG ALA ASN VAL GLY VAL VAL TYR LEU VAL LYS ASP GLY SEQRES 11 C 257 ASP LYS THR SER LYS VAL ILE LEU PRO VAL HIS GLY ASN SEQRES 12 C 257 GLY LEU TRP SER MET MET TYR ALA PHE VAL ALA VAL GLU SEQRES 13 C 257 THR ASP GLY ASN THR VAL SER GLY LEU THR TYR TYR GLU SEQRES 14 C 257 GLN GLY GLU THR PRO GLY LEU GLY GLY GLU VAL GLU ASN SEQRES 15 C 257 PRO ALA TRP ARG ALA GLN TRP VAL GLY LYS LYS LEU PHE SEQRES 16 C 257 ASP GLU ASN HIS LYS PRO ALA ILE LYS ILE VAL LYS GLY SEQRES 17 C 257 GLY ALA PRO GLN GLY SER GLU HIS GLY VAL ASP GLY LEU SEQRES 18 C 257 SER GLY ALA THR LEU THR SER ASN GLY VAL GLN ASN THR SEQRES 19 C 257 PHE ASP PHE TRP LEU GLY ASP MET GLY PHE GLY PRO PHE SEQRES 20 C 257 LEU THR LYS VAL ARG ASP GLY GLY LEU ASN SEQRES 1 D 210 MET SER SER ALA LYS GLU LEU LYS LYS SER VAL LEU ALA SEQRES 2 D 210 PRO VAL LEU ASP ASN ASN PRO ILE ALA LEU GLN VAL LEU SEQRES 3 D 210 GLY VAL CYS SER ALA LEU ALA VAL THR THR LYS LEU GLU SEQRES 4 D 210 THR ALA PHE VAL MET THR LEU ALA VAL MET PHE VAL THR SEQRES 5 D 210 ALA LEU SER ASN PHE PHE VAL SER LEU ILE ARG ASN HIS SEQRES 6 D 210 ILE PRO ASN SER VAL ARG ILE ILE VAL GLN MET ALA ILE SEQRES 7 D 210 ILE ALA SER LEU VAL ILE VAL VAL ASP GLN ILE LEU LYS SEQRES 8 D 210 ALA TYR LEU TYR ASP ILE SER LYS GLN LEU SER VAL PHE SEQRES 9 D 210 VAL GLY LEU ILE ILE THR ASN CYS ILE VAL MET GLY ARG SEQRES 10 D 210 ALA GLU ALA PHE ALA MET LYS SER GLU PRO ILE PRO SER SEQRES 11 D 210 PHE ILE ASP GLY ILE GLY ASN GLY LEU GLY TYR GLY PHE SEQRES 12 D 210 VAL LEU MET THR VAL GLY PHE PHE ARG GLU LEU LEU GLY SEQRES 13 D 210 SER GLY LYS LEU PHE GLY LEU GLU VAL LEU PRO LEU ILE SEQRES 14 D 210 SER ASN GLY GLY TRP TYR GLN PRO ASN GLY LEU MET LEU SEQRES 15 D 210 LEU ALA PRO SER ALA PHE PHE LEU ILE GLY PHE MET ILE SEQRES 16 D 210 TRP ALA ILE ARG THR PHE LYS PRO GLU GLN VAL GLU ALA SEQRES 17 D 210 LYS GLU SEQRES 1 E 198 MET GLU HIS TYR ILE SER LEU LEU VAL LYS SER ILE PHE SEQRES 2 E 198 ILE GLU ASN MET ALA LEU SER PHE PHE LEU GLY MET CYS SEQRES 3 E 198 THR PHE LEU ALA VAL SER LYS LYS VAL LYS THR SER PHE SEQRES 4 E 198 GLY LEU GLY ILE ALA VAL ILE VAL VAL LEU THR ILE SER SEQRES 5 E 198 VAL PRO VAL ASN ASN LEU VAL TYR ASN LEU VAL LEU LYS SEQRES 6 E 198 PRO ASP ALA LEU VAL GLU GLY VAL ASP LEU SER PHE LEU SEQRES 7 E 198 ASN PHE ILE THR PHE ILE GLY VAL ILE ALA ALA LEU VAL SEQRES 8 E 198 GLN ILE LEU GLU MET ILE LEU ASP ARG PHE PHE PRO PRO SEQRES 9 E 198 LEU TYR ASN ALA LEU GLY ILE PHE LEU PRO LEU ILE THR SEQRES 10 E 198 VAL ASN CYS ALA ILE PHE GLY GLY VAL SER PHE MET VAL SEQRES 11 E 198 GLN ARG ASP TYR SER PHE ALA GLU SER VAL VAL TYR GLY SEQRES 12 E 198 PHE GLY SER GLY VAL GLY TRP MET LEU ALA ILE VAL ALA SEQRES 13 E 198 LEU ALA GLY ILE ARG GLU LYS MET LYS TYR SER ASP VAL SEQRES 14 E 198 PRO PRO GLY LEU ARG GLY LEU GLY ILE THR PHE ILE THR SEQRES 15 E 198 ALA GLY LEU MET ALA LEU GLY PHE MET SER PHE SER GLY SEQRES 16 E 198 VAL GLN LEU SEQRES 1 F 408 MET SER THR ILE ILE PHE GLY VAL VAL MET PHE THR LEU SEQRES 2 F 408 ILE ILE LEU ALA LEU VAL LEU VAL ILE LEU PHE ALA LYS SEQRES 3 F 408 SER LYS LEU VAL PRO THR GLY ASP ILE THR ILE SER ILE SEQRES 4 F 408 ASN GLY ASP PRO GLU LYS ALA ILE VAL THR GLN PRO GLY SEQRES 5 F 408 GLY LYS LEU LEU THR ALA LEU ALA GLY ALA GLY VAL PHE SEQRES 6 F 408 VAL SER SER ALA CYS GLY GLY GLY GLY SER CYS GLY GLN SEQRES 7 F 408 CYS ARG VAL LYS ILE LYS SER GLY GLY GLY ASP ILE LEU SEQRES 8 F 408 PRO THR GLU LEU ASP HIS ILE SER LYS GLY GLU ALA ARG SEQRES 9 F 408 GLU GLY GLU ARG LEU ALA CYS GLN VAL ALA VAL LYS ALA SEQRES 10 F 408 ASP MET ASP LEU GLU LEU PRO GLU GLU ILE PHE GLY VAL SEQRES 11 F 408 LYS LYS TRP GLU CYS THR VAL ILE SER ASN ASP ASN LYS SEQRES 12 F 408 ALA THR PHE ILE LYS GLU LEU LYS LEU ALA ILE PRO ASP SEQRES 13 F 408 GLY GLU SER VAL PRO PHE ARG ALA GLY GLY TYR ILE GLN SEQRES 14 F 408 ILE GLU ALA PRO ALA HIS HIS VAL LYS TYR ALA ASP PHE SEQRES 15 F 408 ASP VAL PRO GLU LYS TYR ARG GLY ASP TRP ASP LYS PHE SEQRES 16 F 408 ASN LEU PHE ARG TYR GLU SER LYS VAL ASP GLU PRO ILE SEQRES 17 F 408 ILE ARG ALA TYR SER MET ALA ASN TYR PRO GLU GLU PHE SEQRES 18 F 408 GLY ILE ILE MET LEU ASN VAL ARG ILE ALA THR PRO PRO SEQRES 19 F 408 PRO ASN ASN PRO ASN VAL PRO PRO GLY GLN MET SER SER SEQRES 20 F 408 TYR ILE TRP SER LEU LYS ALA GLY ASP LYS CYS THR ILE SEQRES 21 F 408 SER GLY PRO PHE GLY GLU PHE PHE ALA LYS ASP THR ASP SEQRES 22 F 408 ALA GLU MET VAL PHE ILE GLY GLY GLY ALA GLY MET ALA SEQRES 23 F 408 PRO MET ARG SER HIS ILE PHE ASP GLN LEU LYS ARG LEU SEQRES 24 F 408 LYS SER LYS ARG LYS MET SER TYR TRP TYR GLY ALA ARG SEQRES 25 F 408 SER LYS ARG GLU MET PHE TYR VAL GLU ASP PHE ASP GLY SEQRES 26 F 408 LEU ALA ALA GLU ASN ASP ASN PHE VAL TRP HIS CYS ALA SEQRES 27 F 408 LEU SER ASP PRO GLN PRO GLU ASP ASN TRP THR GLY TYR SEQRES 28 F 408 THR GLY PHE ILE HIS ASN VAL LEU TYR GLU ASN TYR LEU SEQRES 29 F 408 LYS ASP HIS GLU ALA PRO GLU ASP CYS GLU TYR TYR MET SEQRES 30 F 408 CYS GLY PRO PRO MET MET ASN ALA ALA VAL ILE ASN MET SEQRES 31 F 408 LEU LYS ASN LEU GLY VAL GLU GLU GLU ASN ILE LEU LEU SEQRES 32 F 408 ASP ASP PHE GLY GLY HET FMN B 600 30 HET FMN C 301 30 HET CA C 302 1 HET FE D 301 1 HET RBF E 201 27 HET FES F 501 4 HET FAD F 502 53 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM CA CALCIUM ION HETNAM FE FE (III) ION HETNAM RBF RIBOFLAVIN HETNAM FES FE2/S2 (INORGANIC) CLUSTER HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN RBF RIBOFLAVINE; VITAMIN B2 FORMUL 7 FMN 2(C17 H21 N4 O9 P) FORMUL 9 CA CA 2+ FORMUL 10 FE FE 3+ FORMUL 11 RBF C17 H20 N4 O6 FORMUL 12 FES FE2 S2 FORMUL 13 FAD C27 H33 N9 O15 P2 HELIX 1 AA1 GLU A 34 TYR A 36 5 3 HELIX 2 AA2 ALA A 83 ARG A 85 5 3 HELIX 3 AA3 GLU A 106 LEU A 113 5 8 HELIX 4 AA4 ASN A 114 GLY A 126 1 13 HELIX 5 AA5 LEU A 127 PHE A 131 5 5 HELIX 6 AA6 GLU A 162 GLN A 170 1 9 HELIX 7 AA7 GLN A 170 THR A 185 1 16 HELIX 8 AA8 LEU A 219 TYR A 228 1 10 HELIX 9 AA9 TYR A 241 GLY A 254 1 14 HELIX 10 AB1 SER A 282 VAL A 287 1 6 HELIX 11 AB2 THR A 310 ALA A 314 5 5 HELIX 12 AB3 PRO A 390 ALA A 399 1 10 HELIX 13 AB4 SER A 402 GLY A 409 1 8 HELIX 14 AB5 GLU A 416 VAL A 424 1 9 HELIX 15 AB6 GLU A 430 GLU A 445 1 16 HELIX 16 AB7 LEU B 53 LEU B 62 1 10 HELIX 17 AB8 VAL B 64 HIS B 85 1 22 HELIX 18 AB9 LEU B 92 ALA B 97 1 6 HELIX 19 AC1 ASN B 99 GLY B 109 1 11 HELIX 20 AC2 LYS B 121 ARG B 151 1 31 HELIX 21 AC3 GLY B 158 ILE B 169 1 12 HELIX 22 AC4 LEU B 176 VAL B 188 1 13 HELIX 23 AC5 ASN B 203 TYR B 216 1 14 HELIX 24 AC6 PRO B 217 ILE B 220 5 4 HELIX 25 AC7 SER B 271 TYR B 289 1 19 HELIX 26 AC8 SER B 294 ILE B 315 1 22 HELIX 27 AC9 ALA B 321 MET B 325 5 5 HELIX 28 AD1 GLY B 335 MET B 343 1 9 HELIX 29 AD2 THR B 353 VAL B 374 1 22 HELIX 30 AD3 MET B 382 ILE B 405 1 24 HELIX 31 AD4 ILE C 8 ALA C 30 1 23 HELIX 32 AD5 GLY C 32 ALA C 53 1 22 HELIX 33 AD6 GLY C 59 SER C 70 1 12 HELIX 34 AD7 ASP C 92 ALA C 97 1 6 HELIX 35 AD8 LYS C 98 SER C 101 5 4 HELIX 36 AD9 LEU C 176 GLU C 181 5 6 HELIX 37 AE1 ASN C 182 TRP C 189 1 8 HELIX 38 AE2 ALA C 224 LEU C 239 1 16 HELIX 39 AE3 PHE C 244 ASP C 253 1 10 HELIX 40 AE4 LYS D 8 ASN D 18 1 11 HELIX 41 AE5 GLY D 27 THR D 35 1 9 HELIX 42 AE6 LYS D 37 ARG D 63 1 27 HELIX 43 AE7 ARG D 71 LEU D 90 1 20 HELIX 44 AE8 ILE D 97 THR D 110 1 14 HELIX 45 AE9 ASN D 111 ALA D 120 1 10 HELIX 46 AF1 PRO D 129 GLY D 156 1 28 HELIX 47 AF2 LEU D 183 THR D 200 1 18 HELIX 48 AF3 ILE E 5 GLU E 15 1 11 HELIX 49 AF4 CYS E 26 VAL E 31 1 6 HELIX 50 AF5 LYS E 34 LEU E 64 1 31 HELIX 51 AF6 LEU E 78 PHE E 101 1 24 HELIX 52 AF7 PRO E 103 GLY E 110 1 8 HELIX 53 AF8 LEU E 113 THR E 117 5 5 HELIX 54 AF9 ASN E 119 ASP E 133 1 15 HELIX 55 AG1 TYR E 134 TYR E 166 1 33 HELIX 56 AG2 ARG E 174 PHE E 190 1 17 HELIX 57 AG3 MET E 191 GLY E 195 5 5 HELIX 58 AG4 THR F 3 SER F 27 1 25 HELIX 59 AG5 LYS F 54 GLY F 63 1 10 HELIX 60 AG6 LEU F 91 ILE F 98 1 8 HELIX 61 AG7 PRO F 155 GLU F 158 5 4 HELIX 62 AG8 ALA F 180 PHE F 182 5 3 HELIX 63 AG9 PRO F 185 PHE F 195 1 11 HELIX 64 AH1 ASN F 196 ARG F 199 5 4 HELIX 65 AH2 GLY F 243 LEU F 252 1 10 HELIX 66 AH3 GLY F 284 ARG F 298 1 15 HELIX 67 AH4 SER F 313 MET F 317 5 5 HELIX 68 AH5 TYR F 319 ASN F 330 1 12 HELIX 69 AH6 GLN F 343 ASN F 347 5 5 HELIX 70 AH7 PHE F 354 TYR F 363 1 10 HELIX 71 AH8 ALA F 369 CYS F 373 5 5 HELIX 72 AH9 PRO F 380 GLY F 395 1 16 HELIX 73 AI1 GLU F 397 GLU F 399 5 3 SHEET 1 AA1 6 THR A 3 ILE A 4 0 SHEET 2 AA1 6 VAL A 206 ASP A 212 1 O VAL A 210 N THR A 3 SHEET 3 AA1 6 LYS A 188 LYS A 193 1 N VAL A 189 O GLU A 207 SHEET 4 AA1 6 ALA A 148 THR A 152 1 N VAL A 151 O TYR A 190 SHEET 5 AA1 6 TRP A 237 ASN A 240 1 O TRP A 237 N PHE A 150 SHEET 6 AA1 6 ARG A 132 THR A 133 -1 N ARG A 132 O SER A 238 SHEET 1 AA2 6 SER A 17 ASP A 22 0 SHEET 2 AA2 6 ARG A 273 VAL A 278 1 O ARG A 276 N SER A 21 SHEET 3 AA2 6 GLN A 259 ALA A 265 -1 N ARG A 260 O THR A 277 SHEET 4 AA2 6 GLN A 322 ARG A 327 1 O VAL A 323 N SER A 263 SHEET 5 AA2 6 VAL A 296 SER A 302 -1 N ILE A 299 O SER A 324 SHEET 6 AA2 6 SER A 305 LYS A 308 -1 O THR A 307 N SER A 300 SHEET 1 AA3 4 LYS A 28 LEU A 32 0 SHEET 2 AA3 4 LEU A 87 VAL A 94 -1 O ILE A 92 N VAL A 29 SHEET 3 AA3 4 GLY A 74 ARG A 81 -1 N LYS A 75 O GLU A 93 SHEET 4 AA3 4 GLU A 50 VAL A 51 -1 N VAL A 51 O GLY A 74 SHEET 1 AA4 3 PRO A 41 MET A 43 0 SHEET 2 AA4 3 ILE A 56 ASP A 60 -1 O GLU A 59 N THR A 42 SHEET 3 AA4 3 LYS A 67 THR A 69 -1 O PHE A 68 N LEU A 57 SHEET 1 AA5 6 PHE C 83 VAL C 84 0 SHEET 2 AA5 6 ILE C 71 ASP C 77 -1 N LEU C 75 O VAL C 84 SHEET 3 AA5 6 VAL C 121 ASP C 129 -1 O VAL C 124 N ARG C 74 SHEET 4 AA5 6 LYS C 132 ASN C 143 -1 O LYS C 132 N ASP C 129 SHEET 5 AA5 6 MET C 148 GLU C 156 -1 O MET C 149 N GLY C 142 SHEET 6 AA5 6 VAL C 162 GLU C 169 -1 O GLU C 169 N TYR C 150 SHEET 1 AA6 2 SER C 103 LYS C 105 0 SHEET 2 AA6 2 ARG C 117 ALA C 119 -1 O ARG C 118 N ILE C 104 SHEET 1 AA7 2 LYS C 204 VAL C 206 0 SHEET 2 AA7 2 GLY C 217 ASP C 219 1 O VAL C 218 N LYS C 204 SHEET 1 AA8 2 ILE F 37 ILE F 39 0 SHEET 2 AA8 2 LYS F 45 ILE F 47 -1 O ILE F 47 N ILE F 37 SHEET 1 AA9 6 ILE F 208 SER F 213 0 SHEET 2 AA9 6 TYR F 167 ALA F 172 -1 N ILE F 168 O TYR F 212 SHEET 3 AA9 6 LYS F 257 PHE F 264 -1 O SER F 261 N GLN F 169 SHEET 4 AA9 6 LYS F 132 ALA F 144 -1 N CYS F 135 O CYS F 258 SHEET 5 AA9 6 ILE F 147 ALA F 153 -1 O LYS F 151 N ILE F 138 SHEET 6 AA9 6 ILE F 223 ARG F 229 -1 O VAL F 228 N LYS F 148 SHEET 1 AB1 2 HIS F 175 LYS F 178 0 SHEET 2 AB1 2 GLU F 201 VAL F 204 -1 O SER F 202 N VAL F 177 SHEET 1 AB2 6 TYR F 351 THR F 352 0 SHEET 2 AB2 6 PHE F 333 LEU F 339 1 N LEU F 339 O TYR F 351 SHEET 3 AB2 6 MET F 305 ALA F 311 1 N TYR F 309 O ALA F 338 SHEET 4 AB2 6 MET F 276 GLY F 281 1 N GLY F 280 O TRP F 308 SHEET 5 AB2 6 GLU F 374 CYS F 378 1 O GLU F 374 N VAL F 277 SHEET 6 AB2 6 ILE F 401 LEU F 403 1 O LEU F 402 N TYR F 375 LINK OG1 THR B 236 P FMN B 600 1555 1555 1.60 LINK OG1 THR C 225 P FMN C 301 1555 1555 1.58 LINK SG CYS D 29 FE FE D 301 1555 1555 2.28 LINK SG CYS D 112 FE FE D 301 1555 1555 2.32 LINK FE FE D 301 SG CYS E 26 1555 1555 2.36 LINK FE FE D 301 SG CYS E 120 1555 1555 2.24 LINK SG CYS F 70 FE1 FES F 501 1555 1555 2.30 LINK SG CYS F 76 FE1 FES F 501 1555 1555 2.29 LINK SG CYS F 79 FE2 FES F 501 1555 1555 2.28 LINK SG CYS F 111 FE2 FES F 501 1555 1555 2.29 CISPEP 1 LEU A 8 ASP A 9 0 -1.55 CISPEP 2 ARG A 134 PRO A 135 0 7.42 CISPEP 3 HIS A 215 PRO A 216 0 2.81 CISPEP 4 GLU A 389 PRO A 390 0 -8.81 CISPEP 5 THR B 197 GLY B 198 0 1.24 CISPEP 6 LEU B 224 VAL B 225 0 -1.07 CISPEP 7 ALA B 229 ASP B 230 0 -1.22 CISPEP 8 GLY B 245 ALA B 246 0 9.89 CISPEP 9 ALA B 293 SER B 294 0 -7.75 CISPEP 10 ILE B 315 GLY B 316 0 2.65 CISPEP 11 GLU B 380 GLY B 381 0 -2.30 CISPEP 12 ARG B 407 ARG B 408 0 5.31 CISPEP 13 LEU D 26 GLY D 27 0 7.43 CISPEP 14 GLU D 204 GLN D 205 0 0.52 CISPEP 15 PHE E 21 PHE E 22 0 23.77 CISPEP 16 PHE E 102 PRO E 103 0 -3.54 SITE 1 AC1 15 ARG B 209 PHE B 213 TRP B 226 THR B 236 SITE 2 AC1 15 LEU B 238 GLY B 334 GLY B 335 PHE B 338 SITE 3 AC1 15 MET B 343 PRO B 379 GLU B 380 GLY B 381 SITE 4 AC1 15 MET B 382 MET B 383 LEU B 384 SITE 1 AC2 16 LEU C 145 TRP C 146 THR C 173 LEU C 176 SITE 2 AC2 16 LYS C 207 GLY C 223 ALA C 224 THR C 225 SITE 3 AC2 16 LEU C 226 THR C 227 CYS D 29 ALA D 33 SITE 4 AC2 16 LEU D 183 PHE E 22 LEU E 23 SER E 194 SITE 1 AC3 3 GLN C 93 HIS C 141 TRP C 238 SITE 1 AC4 4 CYS D 29 CYS D 112 CYS E 26 CYS E 120 SITE 1 AC5 3 VAL B 399 GLU B 402 LYS E 36 SITE 1 AC6 7 SER F 68 CYS F 70 SER F 75 CYS F 76 SITE 2 AC6 7 GLY F 77 CYS F 79 CYS F 111 SITE 1 AC7 19 ARG F 210 ALA F 211 TYR F 212 SER F 213 SITE 2 AC7 19 ASN F 227 VAL F 228 ARG F 229 ALA F 231 SITE 3 AC7 19 THR F 232 PRO F 233 PRO F 234 ASN F 237 SITE 4 AC7 19 VAL F 240 PRO F 241 GLY F 243 GLN F 244 SITE 5 AC7 19 MET F 245 SER F 246 PHE F 406 CRYST1 95.350 143.380 104.490 90.00 110.96 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010488 0.000000 0.004018 0.00000 SCALE2 0.000000 0.006974 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010249 0.00000