HEADER OXIDOREDUCTASE 03-APR-14 4P9G TITLE STRUCTURE OF THE 2,4'-DIHYDROXYACETOPHENONE DIOXYGENASE FROM TITLE 2 ALCALIGENES SP. COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2,4'-DIHYDROXYACETOPHENONE DIOXYGENASE; COMPND 3 CHAIN: A; COMPND 4 EC: 1.13.11.41; COMPND 5 ENGINEERED: YES; COMPND 6 OTHER_DETAILS: THE N-TERMINAL PORTION COULD NOT BE DEFINED IN THE COMPND 7 ELECTRON DENSITY MAP. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ALCALIGENES SP.; SOURCE 3 ORGANISM_TAXID: 512; SOURCE 4 GENE: DAD; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS DIOXYGENASE, CUPIN-FOLD, IRON-BINDING, CARBONATE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR R.KEEGAN,A.LEBEDEV,P.ERSKINE,J.GUO,S.P.WOOD,D.J.HOPPER,J.B.COOPER REVDAT 3 20-DEC-23 4P9G 1 REMARK REVDAT 2 17-SEP-14 4P9G 1 JRNL REVDAT 1 10-SEP-14 4P9G 0 JRNL AUTH R.KEEGAN,A.LEBEDEV,P.ERSKINE,J.GUO,S.P.WOOD,D.J.HOPPER, JRNL AUTH 2 S.E.J.RIGBY,J.B.COOPER JRNL TITL STRUCTURE OF THE 2,4'-DIHYDROXYACETOPHENONE DIOXYGENASE FROM JRNL TITL 2 ALCALIGENES SP. 4HAP JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2444 2014 JRNL REFN ESSN 1399-0047 JRNL PMID 25195757 JRNL DOI 10.1107/S1399004714015053 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 86.2 REMARK 3 NUMBER OF REFLECTIONS : 10021 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.176 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 512 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 339 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 43.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.2430 REMARK 3 BIN FREE R VALUE SET COUNT : 18 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1234 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 118 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 29.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.70000 REMARK 3 B22 (A**2) : -0.70000 REMARK 3 B33 (A**2) : 1.05000 REMARK 3 B12 (A**2) : -0.35000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.226 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.190 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.120 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.732 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.931 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1310 ; 0.019 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 1783 ; 2.008 ; 1.920 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 153 ; 7.770 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 70 ;35.018 ;22.714 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 189 ;19.201 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;18.956 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 182 ; 0.132 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1050 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 403 REMARK 3 ORIGIN FOR THE GROUP (A): 24.2114 20.6134 5.8224 REMARK 3 T TENSOR REMARK 3 T11: 0.0217 T22: 0.0205 REMARK 3 T33: 0.0141 T12: 0.0036 REMARK 3 T13: -0.0023 T23: 0.0150 REMARK 3 L TENSOR REMARK 3 L11: 0.4367 L22: 0.2933 REMARK 3 L33: 0.7827 L12: 0.1227 REMARK 3 L13: -0.1783 L23: -0.0460 REMARK 3 S TENSOR REMARK 3 S11: 0.0256 S12: 0.0104 S13: 0.0146 REMARK 3 S21: -0.0050 S22: 0.0345 S23: 0.0216 REMARK 3 S31: -0.0069 S32: -0.0437 S33: -0.0601 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4P9G COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000200979. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.072 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 10549 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 57.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.3 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.13600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 49.4 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.61900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: BALBES, MOLREP REMARK 200 STARTING MODEL: 3EBR, 2OQ1, 3BAL, 3CJX REMARK 200 REMARK 200 REMARK: NEEDLES REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.48 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: PROTEIN REMARK 280 CONCENTRATION = 5 MG/ML IN 50 MM TRIS PH 7.5, 100 MM NACL, 1 MM REMARK 280 BETA-MERCAPTOETHANOL. CHYMOTRYPSIN WAS ADDED IN A 1:50 MASS- REMARK 280 RATIO PRIOR TO SETTING UP HANGING-DROP CRYSTALLISATION TRIALS. REMARK 280 WELL SOLUTION: 10 % W/V PEG 1K AND 10 % PEG 10K (MOLECULAR REMARK 280 DIMENSIONS STRUCTURE SCREEN 2, CONDITION 46)., VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.00533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 38.00267 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.00400 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 19.00133 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 95.00667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 76.00533 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 38.00267 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 19.00133 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 57.00400 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 95.00667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -52.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 41.27850 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 71.49646 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 19.00133 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -20 REMARK 465 GLY A -19 REMARK 465 SER A -18 REMARK 465 SER A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 SER A -10 REMARK 465 SER A -9 REMARK 465 GLY A -8 REMARK 465 LEU A -7 REMARK 465 VAL A -6 REMARK 465 PRO A -5 REMARK 465 ARG A -4 REMARK 465 GLY A -3 REMARK 465 SER A -2 REMARK 465 HIS A -1 REMARK 465 MET A 0 REMARK 465 VAL A 1 REMARK 465 ALA A 2 REMARK 465 ASN A 3 REMARK 465 ALA A 4 REMARK 465 ILE A 5 REMARK 465 SER A 6 REMARK 465 GLU A 7 REMARK 465 PHE A 8 REMARK 465 TRP A 9 REMARK 465 ARG A 10 REMARK 465 ASP A 11 REMARK 465 ILE A 12 REMARK 465 ARG A 13 REMARK 465 PRO A 14 REMARK 465 ILE A 15 REMARK 465 GLU A 16 REMARK 465 SER A 17 REMARK 465 PRO A 18 REMARK 465 PHE A 19 REMARK 465 LYS A 20 REMARK 465 PRO A 21 REMARK 465 ASP A 22 REMARK 465 ALA A 23 REMARK 465 LEU A 24 REMARK 465 PRO A 25 REMARK 465 GLU A 26 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 78 CG HIS A 78 CD2 0.054 REMARK 500 HIS A 80 CG HIS A 80 CD2 0.059 REMARK 500 HIS A 96 CG HIS A 96 CD2 0.058 REMARK 500 HIS A 114 CG HIS A 114 CD2 0.058 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 44 -170.00 -115.63 REMARK 500 GLU A 69 -159.06 -119.22 REMARK 500 GLU A 69 -159.06 -139.14 REMARK 500 ARG A 102 117.54 -39.02 REMARK 500 ALA A 141 -90.33 -44.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 FE A 401 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 76 NE2 REMARK 620 2 HIS A 78 NE2 115.2 REMARK 620 3 HIS A 114 NE2 98.1 113.1 REMARK 620 4 CO3 A 402 O1 123.6 106.1 99.2 REMARK 620 5 CO3 A 402 O2 99.4 73.0 156.4 57.7 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue FE A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CO3 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 403 DBREF 4P9G A 2 176 UNP Q9REI7 Q9REI7_ALCSP 2 176 SEQADV 4P9G MET A -20 UNP Q9REI7 INITIATING METHIONINE SEQADV 4P9G GLY A -19 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G SER A -18 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G SER A -17 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G HIS A -16 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G HIS A -15 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G HIS A -14 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G HIS A -13 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G HIS A -12 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G HIS A -11 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G SER A -10 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G SER A -9 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G GLY A -8 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G LEU A -7 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G VAL A -6 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G PRO A -5 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G ARG A -4 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G GLY A -3 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G SER A -2 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G HIS A -1 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G MET A 0 UNP Q9REI7 EXPRESSION TAG SEQADV 4P9G VAL A 1 UNP Q9REI7 EXPRESSION TAG SEQRES 1 A 197 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 197 LEU VAL PRO ARG GLY SER HIS MET VAL ALA ASN ALA ILE SEQRES 3 A 197 SER GLU PHE TRP ARG ASP ILE ARG PRO ILE GLU SER PRO SEQRES 4 A 197 PHE LYS PRO ASP ALA LEU PRO GLU ALA TYR ILE PRO ASN SEQRES 5 A 197 ALA ALA THR GLU ASP GLU ARG TYR TYR VAL PRO PHE THR SEQRES 6 A 197 GLU THR VAL ALA SER ARG PRO LEU TRP ILE SER PRO GLN SEQRES 7 A 197 GLN ASN ARG TRP CYS ASP ILE LEU LEU ALA ARG GLU ALA SEQRES 8 A 197 GLY LEU VAL ASN ARG HIS TYR HIS PRO HIS GLU VAL PHE SEQRES 9 A 197 ALA TYR THR ILE SER GLY LYS TRP GLY TYR LEU GLU HIS SEQRES 10 A 197 ASP TRP THR ALA THR ARG GLY ASP PHE VAL TYR GLU THR SEQRES 11 A 197 PRO GLY GLU GLY HIS THR LEU VAL ALA PHE GLU HIS GLU SEQRES 12 A 197 GLU PRO MET ARG VAL PHE PHE ILE VAL GLN GLY PRO LEU SEQRES 13 A 197 ILE TRP LEU ASP GLU ALA GLY ASN SER ILE GLY HIS PHE SEQRES 14 A 197 ASP VAL HIS ASP TYR ILE ALA MET CYS ARG GLU HIS TYR SEQRES 15 A 197 GLU LYS VAL GLY LEU GLY ALA ASP LEU VAL VAL THR LEU SEQRES 16 A 197 PHE ARG HET FE A 401 1 HET CO3 A 402 4 HET GOL A 403 6 HETNAM FE FE (III) ION HETNAM CO3 CARBONATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FE FE 3+ FORMUL 3 CO3 C O3 2- FORMUL 4 GOL C3 H8 O3 FORMUL 5 HOH *118(H2 O) HELIX 1 AA1 ASP A 36 TYR A 40 5 5 HELIX 2 AA2 ASP A 149 VAL A 164 1 16 HELIX 3 AA3 ALA A 168 THR A 173 1 6 SHEET 1 AA1 6 VAL A 41 PRO A 42 0 SHEET 2 AA1 6 ALA A 48 SER A 55 -1 O SER A 49 N VAL A 41 SHEET 3 AA1 6 ARG A 60 ALA A 67 -1 O LEU A 66 N ALA A 48 SHEET 4 AA1 6 MET A 125 GLN A 132 -1 O VAL A 127 N LEU A 65 SHEET 5 AA1 6 VAL A 82 SER A 88 -1 N TYR A 85 O PHE A 128 SHEET 6 AA1 6 PHE A 105 GLU A 108 -1 O VAL A 106 N ALA A 84 SHEET 1 AA2 6 ALA A 100 THR A 101 0 SHEET 2 AA2 6 LYS A 90 TYR A 93 -1 N TRP A 91 O ALA A 100 SHEET 3 AA2 6 GLY A 113 ALA A 118 -1 O VAL A 117 N GLY A 92 SHEET 4 AA2 6 GLY A 71 TYR A 77 -1 N VAL A 73 O LEU A 116 SHEET 5 AA2 6 LEU A 135 LEU A 138 -1 O ILE A 136 N TYR A 77 SHEET 6 AA2 6 SER A 144 PHE A 148 -1 O ILE A 145 N TRP A 137 LINK NE2 HIS A 76 FE FE A 401 1555 1555 1.91 LINK NE2 HIS A 78 FE FE A 401 1555 1555 1.96 LINK NE2 HIS A 114 FE FE A 401 1555 1555 2.02 LINK FE FE A 401 O1 CO3 A 402 1555 1555 2.04 LINK FE FE A 401 O2 CO3 A 402 1555 1555 2.51 CISPEP 1 GLY A 133 PRO A 134 0 -1.41 SITE 1 AC1 4 HIS A 76 HIS A 78 HIS A 114 CO3 A 402 SITE 1 AC2 7 HIS A 76 HIS A 78 TYR A 93 HIS A 114 SITE 2 AC2 7 PHE A 129 FE A 401 GOL A 403 SITE 1 AC3 5 SER A 49 TRP A 61 ASP A 63 TYR A 153 SITE 2 AC3 5 CO3 A 402 CRYST1 82.557 82.557 114.008 90.00 90.00 120.00 P 65 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012113 0.006993 0.000000 0.00000 SCALE2 0.000000 0.013987 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008771 0.00000