data_4PCO # _entry.id 4PCO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PCO pdb_00004pco 10.2210/pdb4pco/pdb WWPDB D_1000201158 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-10-14 2 'Structure model' 1 1 2016-01-27 3 'Structure model' 1 2 2017-09-06 4 'Structure model' 1 3 2019-12-11 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' pdbx_audit_support 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_pdbx_audit_support.funding_organization' 5 5 'Structure model' '_database_2.pdbx_DOI' 6 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 4PCO _pdbx_database_status.recvd_initial_deposition_date 2014-04-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs . _pdbx_database_status.methods_development_category . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Mooers, B.H.M.' _audit_author.pdbx_ordinal 1 # _citation.abstract . _citation.abstract_id_CAS . _citation.book_id_ISBN . _citation.book_publisher ? _citation.book_publisher_city . _citation.book_title . _citation.coordinate_linkage . _citation.country US _citation.database_id_Medline . _citation.details . _citation.id primary _citation.journal_abbrev J.Phys.Chem.B _citation.journal_id_ASTM JPCBFK _citation.journal_id_CSD 1278 _citation.journal_id_ISSN 1089-5647 _citation.journal_full . _citation.journal_issue . _citation.journal_volume 119 _citation.language . _citation.page_first 13252 _citation.page_last 13261 _citation.title 'Structures and Energetics of Four Adjacent GU Pairs That Stabilize an RNA Helix.' _citation.year 2015 _citation.database_id_CSD . _citation.pdbx_database_id_DOI 10.1021/acs.jpcb.5b06970 _citation.pdbx_database_id_PubMed 26425937 _citation.unpublished_flag . # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gu, X.' 1 ? primary 'Mooers, B.H.' 2 ? primary 'Thomas, L.M.' 3 ? primary 'Malone, J.' 4 ? primary 'Harris, S.' 5 ? primary 'Schroeder, S.J.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn ;RNA (5'-D(*GP*GP*UP*GP*GP*CP*UP*GP*UP*U)-3') ; 3210.916 5 ? ? ? ? 2 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 12 ? ? ? ? 3 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 4 water nat water 18.015 190 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'GU rich dsRNA' # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GGUGGCUGUU _entity_poly.pdbx_seq_one_letter_code_can GGUGGCUGUU _entity_poly.pdbx_strand_id A,B,C,D,E _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT HEXAMMINE(III)' NCO 3 'CHLORIDE ION' CL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 U n 1 4 G n 1 5 G n 1 6 C n 1 7 U n 1 8 G n 1 9 U n 1 10 U n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num 1 _pdbx_entity_src_syn.pdbx_end_seq_num 10 _pdbx_entity_src_syn.organism_scientific 'Endothia gyrosa' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 40263 _pdbx_entity_src_syn.details 'phsophoramidite synthesis' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 1 G G A . n A 1 2 G 2 2 2 G G A . n A 1 3 U 3 3 3 U U A . n A 1 4 G 4 4 4 G G A . n A 1 5 G 5 5 5 G G A . n A 1 6 C 6 6 6 C C A . n A 1 7 U 7 7 7 U U A . n A 1 8 G 8 8 8 G G A . n A 1 9 U 9 9 9 U U A . n A 1 10 U 10 10 10 U U A . n B 1 1 G 1 1 1 G G B . n B 1 2 G 2 2 2 G G B . n B 1 3 U 3 3 3 U U B . n B 1 4 G 4 4 4 G G B . n B 1 5 G 5 5 5 G G B . n B 1 6 C 6 6 6 C C B . n B 1 7 U 7 7 7 U U B . n B 1 8 G 8 8 8 G G B . n B 1 9 U 9 9 9 U U B . n B 1 10 U 10 10 10 U U B . n C 1 1 G 1 1 1 G G C . n C 1 2 G 2 2 2 G G C . n C 1 3 U 3 3 3 U U C . n C 1 4 G 4 4 4 G G C . n C 1 5 G 5 5 5 G G C . n C 1 6 C 6 6 6 C C C . n C 1 7 U 7 7 7 U U C . n C 1 8 G 8 8 8 G G C . n C 1 9 U 9 9 9 U U C . n C 1 10 U 10 10 10 U U C . n D 1 1 G 1 1 1 G G D . n D 1 2 G 2 2 2 G G D . n D 1 3 U 3 3 3 U U D . n D 1 4 G 4 4 4 G G D . n D 1 5 G 5 5 5 G G D . n D 1 6 C 6 6 6 C C D . n D 1 7 U 7 7 7 U U D . n D 1 8 G 8 8 8 G G D . n D 1 9 U 9 9 9 U U D . n D 1 10 U 10 10 10 U U D . n E 1 1 G 1 1 1 G G E . n E 1 2 G 2 2 2 G G E . n E 1 3 U 3 3 3 U U E . n E 1 4 G 4 4 4 G G E . n E 1 5 G 5 5 5 G G E . n E 1 6 C 6 6 6 C C E . n E 1 7 U 7 7 7 U U E . n E 1 8 G 8 8 8 G G E . n E 1 9 U 9 9 9 U U E . n E 1 10 U 10 10 10 U U E . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code F 2 NCO 1 101 5 NCO NCO A . G 2 NCO 1 102 7 NCO NCO A . H 2 NCO 1 103 11 NCO NCO A . I 3 CL 1 104 2 CL CL A . J 3 CL 1 105 3 CL CL A . K 2 NCO 1 101 2 NCO NCO B . L 2 NCO 1 102 6 NCO NCO B . M 2 NCO 1 103 8 NCO NCO B . N 3 CL 1 104 1 CL CL B . O 2 NCO 1 101 1 NCO NCO C . P 2 NCO 1 102 4 NCO NCO C . Q 2 NCO 1 103 10 NCO NCO C . R 2 NCO 1 101 3 NCO NCO D . S 2 NCO 1 101 9 NCO NCO E . T 2 NCO 1 102 12 NCO NCO E . U 4 HOH 1 201 141 HOH HOH A . U 4 HOH 2 202 153 HOH HOH A . U 4 HOH 3 203 159 HOH HOH A . U 4 HOH 4 204 41 HOH HOH A . U 4 HOH 5 205 12 HOH HOH A . U 4 HOH 6 206 43 HOH HOH A . U 4 HOH 7 207 59 HOH HOH A . U 4 HOH 8 208 76 HOH HOH A . U 4 HOH 9 209 114 HOH HOH A . U 4 HOH 10 210 185 HOH HOH A . U 4 HOH 11 211 6 HOH HOH A . U 4 HOH 12 212 22 HOH HOH A . U 4 HOH 13 213 117 HOH HOH A . U 4 HOH 14 214 102 HOH HOH A . U 4 HOH 15 215 84 HOH HOH A . U 4 HOH 16 216 99 HOH HOH A . U 4 HOH 17 217 11 HOH HOH A . U 4 HOH 18 218 74 HOH HOH A . U 4 HOH 19 219 40 HOH HOH A . U 4 HOH 20 220 25 HOH HOH A . U 4 HOH 21 221 24 HOH HOH A . U 4 HOH 22 222 56 HOH HOH A . U 4 HOH 23 223 106 HOH HOH A . U 4 HOH 24 224 55 HOH HOH A . U 4 HOH 25 225 10 HOH HOH A . U 4 HOH 26 226 103 HOH HOH A . U 4 HOH 27 227 31 HOH HOH A . U 4 HOH 28 228 120 HOH HOH A . U 4 HOH 29 229 100 HOH HOH A . U 4 HOH 30 230 30 HOH HOH A . U 4 HOH 31 231 138 HOH HOH A . U 4 HOH 32 232 169 HOH HOH A . U 4 HOH 33 233 109 HOH HOH A . U 4 HOH 34 234 101 HOH HOH A . U 4 HOH 35 235 26 HOH HOH A . U 4 HOH 36 236 15 HOH HOH A . U 4 HOH 37 237 180 HOH HOH A . U 4 HOH 38 238 130 HOH HOH A . U 4 HOH 39 239 87 HOH HOH A . U 4 HOH 40 240 195 HOH HOH A . U 4 HOH 41 241 89 HOH HOH A . U 4 HOH 42 242 171 HOH HOH A . U 4 HOH 43 243 77 HOH HOH A . V 4 HOH 1 201 65 HOH HOH B . V 4 HOH 2 202 132 HOH HOH B . V 4 HOH 3 203 95 HOH HOH B . V 4 HOH 4 204 61 HOH HOH B . V 4 HOH 5 205 49 HOH HOH B . V 4 HOH 6 206 135 HOH HOH B . V 4 HOH 7 207 48 HOH HOH B . V 4 HOH 8 208 82 HOH HOH B . V 4 HOH 9 209 193 HOH HOH B . V 4 HOH 10 210 16 HOH HOH B . V 4 HOH 11 211 96 HOH HOH B . V 4 HOH 12 212 177 HOH HOH B . V 4 HOH 13 213 14 HOH HOH B . V 4 HOH 14 214 1 HOH HOH B . V 4 HOH 15 215 118 HOH HOH B . V 4 HOH 16 216 53 HOH HOH B . V 4 HOH 17 217 3 HOH HOH B . V 4 HOH 18 218 116 HOH HOH B . V 4 HOH 19 219 124 HOH HOH B . V 4 HOH 20 220 140 HOH HOH B . V 4 HOH 21 221 2 HOH HOH B . V 4 HOH 22 222 34 HOH HOH B . V 4 HOH 23 223 9 HOH HOH B . V 4 HOH 24 224 128 HOH HOH B . V 4 HOH 25 225 108 HOH HOH B . V 4 HOH 26 226 47 HOH HOH B . V 4 HOH 27 227 150 HOH HOH B . V 4 HOH 28 228 85 HOH HOH B . V 4 HOH 29 229 27 HOH HOH B . V 4 HOH 30 230 21 HOH HOH B . V 4 HOH 31 231 13 HOH HOH B . V 4 HOH 32 232 73 HOH HOH B . V 4 HOH 33 233 113 HOH HOH B . V 4 HOH 34 234 46 HOH HOH B . V 4 HOH 35 235 18 HOH HOH B . V 4 HOH 36 236 187 HOH HOH B . V 4 HOH 37 237 133 HOH HOH B . V 4 HOH 38 238 105 HOH HOH B . V 4 HOH 39 239 147 HOH HOH B . V 4 HOH 40 240 119 HOH HOH B . V 4 HOH 41 241 19 HOH HOH B . V 4 HOH 42 242 32 HOH HOH B . V 4 HOH 43 243 23 HOH HOH B . V 4 HOH 44 244 68 HOH HOH B . V 4 HOH 45 245 146 HOH HOH B . V 4 HOH 46 246 172 HOH HOH B . V 4 HOH 47 247 142 HOH HOH B . V 4 HOH 48 248 110 HOH HOH B . V 4 HOH 49 249 50 HOH HOH B . V 4 HOH 50 250 81 HOH HOH B . V 4 HOH 51 251 148 HOH HOH B . V 4 HOH 52 252 191 HOH HOH B . V 4 HOH 53 253 97 HOH HOH B . V 4 HOH 54 254 121 HOH HOH B . V 4 HOH 55 255 161 HOH HOH B . V 4 HOH 56 256 184 HOH HOH B . V 4 HOH 57 257 45 HOH HOH B . W 4 HOH 1 201 122 HOH HOH C . W 4 HOH 2 202 164 HOH HOH C . W 4 HOH 3 203 158 HOH HOH C . W 4 HOH 4 204 125 HOH HOH C . W 4 HOH 5 205 86 HOH HOH C . W 4 HOH 6 206 33 HOH HOH C . W 4 HOH 7 207 175 HOH HOH C . W 4 HOH 8 208 58 HOH HOH C . W 4 HOH 9 209 20 HOH HOH C . W 4 HOH 10 210 71 HOH HOH C . W 4 HOH 11 211 92 HOH HOH C . W 4 HOH 12 212 129 HOH HOH C . W 4 HOH 13 213 107 HOH HOH C . W 4 HOH 14 214 94 HOH HOH C . W 4 HOH 15 215 127 HOH HOH C . W 4 HOH 16 216 72 HOH HOH C . W 4 HOH 17 217 52 HOH HOH C . W 4 HOH 18 218 145 HOH HOH C . W 4 HOH 19 219 4 HOH HOH C . W 4 HOH 20 220 5 HOH HOH C . W 4 HOH 21 221 57 HOH HOH C . W 4 HOH 22 222 17 HOH HOH C . W 4 HOH 23 223 75 HOH HOH C . W 4 HOH 24 224 64 HOH HOH C . W 4 HOH 25 225 83 HOH HOH C . W 4 HOH 26 226 123 HOH HOH C . W 4 HOH 27 227 182 HOH HOH C . W 4 HOH 28 228 152 HOH HOH C . X 4 HOH 1 201 131 HOH HOH D . X 4 HOH 2 202 139 HOH HOH D . X 4 HOH 3 203 149 HOH HOH D . X 4 HOH 4 204 36 HOH HOH D . X 4 HOH 5 205 60 HOH HOH D . X 4 HOH 6 206 51 HOH HOH D . X 4 HOH 7 207 126 HOH HOH D . X 4 HOH 8 208 78 HOH HOH D . X 4 HOH 9 209 160 HOH HOH D . X 4 HOH 10 210 37 HOH HOH D . X 4 HOH 11 211 155 HOH HOH D . X 4 HOH 12 212 29 HOH HOH D . X 4 HOH 13 213 80 HOH HOH D . X 4 HOH 14 214 157 HOH HOH D . X 4 HOH 15 215 54 HOH HOH D . X 4 HOH 16 216 69 HOH HOH D . X 4 HOH 17 217 165 HOH HOH D . X 4 HOH 18 218 79 HOH HOH D . X 4 HOH 19 219 28 HOH HOH D . X 4 HOH 20 220 98 HOH HOH D . X 4 HOH 21 221 8 HOH HOH D . X 4 HOH 22 222 91 HOH HOH D . X 4 HOH 23 223 44 HOH HOH D . X 4 HOH 24 224 137 HOH HOH D . X 4 HOH 25 225 7 HOH HOH D . X 4 HOH 26 226 183 HOH HOH D . X 4 HOH 27 227 196 HOH HOH D . X 4 HOH 28 228 35 HOH HOH D . X 4 HOH 29 229 176 HOH HOH D . Y 4 HOH 1 201 173 HOH HOH E . Y 4 HOH 2 202 156 HOH HOH E . Y 4 HOH 3 203 88 HOH HOH E . Y 4 HOH 4 204 136 HOH HOH E . Y 4 HOH 5 205 67 HOH HOH E . Y 4 HOH 6 206 38 HOH HOH E . Y 4 HOH 7 207 112 HOH HOH E . Y 4 HOH 8 208 90 HOH HOH E . Y 4 HOH 9 209 66 HOH HOH E . Y 4 HOH 10 210 62 HOH HOH E . Y 4 HOH 11 211 167 HOH HOH E . Y 4 HOH 12 212 115 HOH HOH E . Y 4 HOH 13 213 93 HOH HOH E . Y 4 HOH 14 214 174 HOH HOH E . Y 4 HOH 15 215 104 HOH HOH E . Y 4 HOH 16 216 134 HOH HOH E . Y 4 HOH 17 217 181 HOH HOH E . Y 4 HOH 18 218 39 HOH HOH E . Y 4 HOH 19 219 111 HOH HOH E . Y 4 HOH 20 220 70 HOH HOH E . Y 4 HOH 21 221 151 HOH HOH E . Y 4 HOH 22 222 186 HOH HOH E . Y 4 HOH 23 223 144 HOH HOH E . Y 4 HOH 24 224 63 HOH HOH E . Y 4 HOH 25 225 179 HOH HOH E . Y 4 HOH 26 226 42 HOH HOH E . Y 4 HOH 27 227 170 HOH HOH E . Y 4 HOH 28 228 163 HOH HOH E . Y 4 HOH 29 229 178 HOH HOH E . Y 4 HOH 30 230 190 HOH HOH E . Y 4 HOH 31 231 189 HOH HOH E . Y 4 HOH 32 232 154 HOH HOH E . Y 4 HOH 33 233 194 HOH HOH E . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.9_1678 1 ? phasing . . . . . . . . . . . SHELX . . . . 2 ? phasing . . . . . . . . . . . SHELX . . . . 3 ? 'data extraction' . . . . . . . . . . . PDB_EXTRACT . . . 3.14 4 ? 'model building' . . . . . . . . . . . Coot . . . . 5 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? Blu-Ice ? ? ? . 6 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 7 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXD ? ? ? . 8 # _cell.entry_id 4PCO _cell.length_a 36.616 _cell.length_b 43.224 _cell.length_c 83.256 _cell.angle_alpha 90.00 _cell.angle_beta 102.48 _cell.angle_gamma 90.00 _cell.Z_PDB 20 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PCO _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # _exptl.absorpt_coefficient_mu . _exptl.absorpt_correction_T_max . _exptl.absorpt_correction_T_min . _exptl.absorpt_correction_type . _exptl.absorpt_process_details . _exptl.entry_id 4PCO _exptl.crystals_number 1 _exptl.details . _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details . # _exptl_crystal.colour . _exptl_crystal.density_diffrn . _exptl_crystal.density_Matthews 2.00 _exptl_crystal.density_method . _exptl_crystal.density_percent_sol 38.60 _exptl_crystal.description 'orange plates' _exptl_crystal.F_000 . _exptl_crystal.id 1 _exptl_crystal.preparation . _exptl_crystal.size_max . _exptl_crystal.size_mid . _exptl_crystal.size_min . _exptl_crystal.size_rad . _exptl_crystal.colour_lustre . _exptl_crystal.colour_modifier . _exptl_crystal.colour_primary . _exptl_crystal.density_meas . _exptl_crystal.density_meas_esd . _exptl_crystal.density_meas_gt . _exptl_crystal.density_meas_lt . _exptl_crystal.density_meas_temp . _exptl_crystal.density_meas_temp_esd . _exptl_crystal.density_meas_temp_gt . _exptl_crystal.density_meas_temp_lt . _exptl_crystal.pdbx_crystal_image_url . _exptl_crystal.pdbx_crystal_image_format . _exptl_crystal.pdbx_mosaicity . _exptl_crystal.pdbx_mosaicity_esd . # _exptl_crystal_grow.apparatus . _exptl_crystal_grow.atmosphere . _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details . _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref . _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.pressure . _exptl_crystal_grow.pressure_esd . _exptl_crystal_grow.seeding . _exptl_crystal_grow.seeding_ref . _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details . _exptl_crystal_grow.temp_esd . _exptl_crystal_grow.time . _exptl_crystal_grow.pdbx_details ;15 mg/mL RNA, 26.2% (v/v) 2-methyl-2,4-pentanediol (MPD), 0.04 M lithium chloride, 0.03 M cobalt hexamine chloride, 0.04 M sodium cacodylate, pH 5.5 ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.ambient_environment . _diffrn.ambient_temp 100 _diffrn.ambient_temp_details . _diffrn.ambient_temp_esd . _diffrn.crystal_id 1 _diffrn.crystal_support . _diffrn.crystal_treatment . _diffrn.details . _diffrn.id 1 _diffrn.ambient_pressure . _diffrn.ambient_pressure_esd . _diffrn.ambient_pressure_gt . _diffrn.ambient_pressure_lt . _diffrn.ambient_temp_gt . _diffrn.ambient_temp_lt . # _diffrn_detector.details 'Rh coated flat mirrors' _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.area_resol_mean . _diffrn_detector.dtime . _diffrn_detector.pdbx_frames_total . _diffrn_detector.pdbx_collection_time_total . _diffrn_detector.pdbx_collection_date 2013-06-11 # _diffrn_radiation.collimation . _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge . _diffrn_radiation.inhomogeneity . _diffrn_radiation.monochromator 'Side scattering I-beam bent single crystal, asymmetric cut 4.9650 deg' _diffrn_radiation.polarisn_norm . _diffrn_radiation.polarisn_ratio . _diffrn_radiation.probe . _diffrn_radiation.type . _diffrn_radiation.xray_symbol . _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list . _diffrn_radiation.pdbx_wavelength . _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_analyzer . _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.9795 1.0 2 1.3624 1.0 3 1.6053 1.0 4 1.6068 1.0 # _diffrn_source.current . _diffrn_source.details . _diffrn_source.diffrn_id 1 _diffrn_source.power . _diffrn_source.size . _diffrn_source.source SYNCHROTRON _diffrn_source.target . _diffrn_source.type 'SSRL BEAMLINE BL7-1' _diffrn_source.voltage . _diffrn_source.take-off_angle . _diffrn_source.pdbx_wavelength_list '0.9795, 1.3624, 1.6053, 1.6068' _diffrn_source.pdbx_wavelength . _diffrn_source.pdbx_synchrotron_beamline BL7-1 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.B_iso_Wilson_estimate 11.980 _reflns.entry_id 4PCO _reflns.data_reduction_details . _reflns.data_reduction_method . _reflns.d_resolution_high 1.320 _reflns.d_resolution_low 81.289 _reflns.details . _reflns.limit_h_max . _reflns.limit_h_min . _reflns.limit_k_max . _reflns.limit_k_min . _reflns.limit_l_max . _reflns.limit_l_min . _reflns.number_all 29968 _reflns.number_obs 29968 _reflns.observed_criterion . _reflns.observed_criterion_F_max . _reflns.observed_criterion_F_min . _reflns.observed_criterion_I_max . _reflns.observed_criterion_I_min . _reflns.observed_criterion_sigma_F . _reflns.observed_criterion_sigma_I . _reflns.percent_possible_obs 100.000 _reflns.R_free_details . _reflns.Rmerge_F_all . _reflns.Rmerge_F_obs . _reflns.Friedel_coverage . _reflns.number_gt . _reflns.threshold_expression . _reflns.pdbx_redundancy 7.900 _reflns.pdbx_Rmerge_I_obs . _reflns.pdbx_Rmerge_I_all . _reflns.pdbx_Rsym_value 0.060 _reflns.pdbx_netI_over_av_sigmaI 5.063 _reflns.pdbx_netI_over_sigmaI 18.200 _reflns.pdbx_res_netI_over_av_sigmaI_2 . _reflns.pdbx_res_netI_over_sigmaI_2 . _reflns.pdbx_chi_squared . _reflns.pdbx_scaling_rejects . _reflns.pdbx_d_res_high_opt . _reflns.pdbx_d_res_low_opt . _reflns.pdbx_d_res_opt_method . _reflns.phase_calculation_details . _reflns.pdbx_Rrim_I_all 0.070 _reflns.pdbx_Rpim_I_all 0.023 _reflns.pdbx_d_opt . _reflns.pdbx_number_measured_all 236794 _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.320 1.390 . 1.200 31195 . . 4325 . 100.000 . . . . 0.667 . . . . . . . . 7.200 0.667 . . 2.700 . 0.289 0 1 1 1.390 1.480 . 1.900 30041 . . 4151 . 100.000 . . . . 0.416 . . . . . . . . 7.200 0.416 . . 4.200 . 0.181 0 2 1 1.480 1.580 . 3.100 28273 . . 3884 . 100.000 . . . . 0.246 . . . . . . . . 7.300 0.246 . . 6.800 . 0.107 0 3 1 1.580 1.700 . 5.600 25992 . . 3577 . 100.000 . . . . 0.130 . . . . . . . . 7.300 0.130 . . 11.700 . 0.057 0 4 1 1.700 1.870 . 7.600 24381 . . 3344 . 100.000 . . . . 0.095 . . . . . . . . 7.300 0.095 . . 16.000 . 0.042 0 5 1 1.870 2.090 . 9.700 21885 . . 3007 . 100.000 . . . . 0.071 . . . . . . . . 7.300 0.071 . . 21.500 . 0.032 0 6 1 2.090 2.410 . 10.600 20813 . . 2671 . 100.000 . . . . 0.061 . . . . . . . . 7.800 0.061 . . 28.600 . 0.026 0 7 1 2.410 2.950 . 9.600 24327 . . 2248 . 100.000 . . . . 0.054 . . . . . . . . 10.800 0.054 . . 40.500 . 0.019 0 8 1 2.950 4.170 . 10.700 19481 . . 1768 . 100.000 . . . . 0.040 . . . . . . . . 11.000 0.040 . . 57.800 . 0.014 0 9 1 4.170 27.521 . 8.700 10406 . . 993 . 99.800 . . . . 0.045 . . . . . . . . 10.500 0.045 . . 61.400 . 0.017 0 10 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4PCO _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 29968 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.88 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 27.521 _refine.ls_d_res_high 1.320 _refine.ls_percent_reflns_obs 99.92 _refine.ls_R_factor_obs 0.1567 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1552 _refine.ls_R_factor_R_free 0.1835 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.05 _refine.ls_number_reflns_R_free 2957 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.12 _refine.pdbx_overall_phase_error 19.45 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 1060 _refine_hist.pdbx_number_atoms_ligand 87 _refine_hist.number_atoms_solvent 190 _refine_hist.number_atoms_total 1337 _refine_hist.d_res_high 1.320 _refine_hist.d_res_low 27.521 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.005 ? ? 1399 'X-RAY DIFFRACTION' ? f_angle_d 1.038 ? ? 2251 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 7.186 ? ? 651 'X-RAY DIFFRACTION' ? f_chiral_restr 0.033 ? ? 274 'X-RAY DIFFRACTION' ? f_plane_restr 0.011 ? ? 56 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 1.3200 1.3417 2705 0.2445 100.00 0.2422 . . 159 . . . . 'X-RAY DIFFRACTION' . 1.3417 1.3648 2607 0.2419 100.00 0.2502 . . 132 . . . . 'X-RAY DIFFRACTION' . 1.3648 1.3896 2600 0.2215 100.00 0.2785 . . 130 . . . . 'X-RAY DIFFRACTION' . 1.3896 1.4163 2731 0.1985 100.00 0.2205 . . 144 . . . . 'X-RAY DIFFRACTION' . 1.4163 1.4453 2605 0.1893 100.00 0.2046 . . 135 . . . . 'X-RAY DIFFRACTION' . 1.4453 1.4767 2660 0.1829 100.00 0.2563 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.4767 1.5110 2644 0.1771 100.00 0.1819 . . 142 . . . . 'X-RAY DIFFRACTION' . 1.5110 1.5488 2638 0.1647 100.00 0.2140 . . 118 . . . . 'X-RAY DIFFRACTION' . 1.5488 1.5907 2727 0.1503 100.00 0.2245 . . 128 . . . . 'X-RAY DIFFRACTION' . 1.5907 1.6375 2597 0.1449 100.00 0.1925 . . 129 . . . . 'X-RAY DIFFRACTION' . 1.6375 1.6903 2663 0.1393 100.00 0.1731 . . 137 . . . . 'X-RAY DIFFRACTION' . 1.6903 1.7507 2656 0.1379 100.00 0.1753 . . 150 . . . . 'X-RAY DIFFRACTION' . 1.7507 1.8208 2601 0.1472 100.00 0.1934 . . 141 . . . . 'X-RAY DIFFRACTION' . 1.8208 1.9037 2677 0.1474 100.00 0.2173 . . 154 . . . . 'X-RAY DIFFRACTION' . 1.9037 2.0040 2662 0.1446 100.00 0.1857 . . 133 . . . . 'X-RAY DIFFRACTION' . 2.0040 2.1295 2653 0.1469 100.00 0.2038 . . 109 . . . . 'X-RAY DIFFRACTION' . 2.1295 2.2939 2673 0.1515 100.00 0.1722 . . 131 . . . . 'X-RAY DIFFRACTION' . 2.2939 2.5246 2596 0.1635 100.00 0.1901 . . 169 . . . . 'X-RAY DIFFRACTION' . 2.5246 2.8895 2638 0.1658 100.00 0.1868 . . 169 . . . . 'X-RAY DIFFRACTION' . 2.8895 3.6392 2648 0.1391 100.00 0.1689 . . 141 . . . . 'X-RAY DIFFRACTION' . 3.6392 27.5274 2623 0.1441 100.00 0.1451 . . 164 . . . . # _struct.entry_id 4PCO _struct.title 'Crystal structure of double-stranded RNA with four terminal GU wobble base pairs' _struct.pdbx_model_details 'overwound RNA; cobalt hexamine binding, chloride binding' _struct.pdbx_formula_weight . _struct.pdbx_formula_weight_method . _struct.pdbx_model_type_details . _struct.pdbx_CASP_flag . # _struct_keywords.entry_id 4PCO _struct_keywords.text 'GU wobble base pair motif, RNA' _struct_keywords.pdbx_keywords RNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 1 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 2 ? L N N 2 ? M N N 2 ? N N N 3 ? O N N 2 ? P N N 2 ? Q N N 2 ? R N N 2 ? S N N 2 ? T N N 2 ? U N N 4 ? V N N 4 ? W N N 4 ? X N N 4 ? Y N N 4 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4PCO _struct_ref.pdbx_db_accession 4PCO _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4PCO A 1 ? 10 ? 4PCO 1 ? 10 ? 1 10 2 1 4PCO B 1 ? 10 ? 4PCO 1 ? 10 ? 1 10 3 1 4PCO C 1 ? 10 ? 4PCO 1 ? 10 ? 1 10 4 1 4PCO D 1 ? 10 ? 4PCO 1 ? 10 ? 1 10 5 1 4PCO E 1 ? 10 ? 4PCO 1 ? 10 ? 1 10 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PISA dimeric 2 2 author_and_software_defined_assembly PISA dimeric 2 3 author_and_software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2810 ? 1 MORE -46 ? 1 'SSA (A^2)' 3530 ? 2 'ABSA (A^2)' 2320 ? 2 MORE -27 ? 2 'SSA (A^2)' 3820 ? 3 'ABSA (A^2)' 2520 ? 3 MORE -25 ? 3 'SSA (A^2)' 3300 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,F,G,H,I,J,K,L,M,N,U,V 2 1 C,D,O,P,Q,R,W,X 3 1,2 E,S,T,Y # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A G 1 N1 ? ? ? 1_555 B U 10 O2 ? ? A G 1 B U 10 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog2 hydrog ? ? A G 1 O6 ? ? ? 1_555 B U 10 N3 ? ? A G 1 B U 10 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog3 hydrog ? ? A G 2 N1 ? ? ? 1_555 B U 9 O2 ? ? A G 2 B U 9 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog4 hydrog ? ? A G 2 O6 ? ? ? 1_555 B U 9 N3 ? ? A G 2 B U 9 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog5 hydrog ? ? A U 3 N3 ? ? ? 1_555 B G 8 O6 ? ? A U 3 B G 8 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog6 hydrog ? ? A U 3 O2 ? ? ? 1_555 B G 8 N1 ? ? A U 3 B G 8 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog7 hydrog ? ? A G 4 N1 ? ? ? 1_555 B U 7 O2 ? ? A G 4 B U 7 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog8 hydrog ? ? A G 4 O6 ? ? ? 1_555 B U 7 N3 ? ? A G 4 B U 7 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog9 hydrog ? ? A G 5 N1 ? ? ? 1_555 B C 6 N3 ? ? A G 5 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A G 5 N2 ? ? ? 1_555 B C 6 O2 ? ? A G 5 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A G 5 O6 ? ? ? 1_555 B C 6 N4 ? ? A G 5 B C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A C 6 N3 ? ? ? 1_555 B G 5 N1 ? ? A C 6 B G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A C 6 N4 ? ? ? 1_555 B G 5 O6 ? ? A C 6 B G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A C 6 O2 ? ? ? 1_555 B G 5 N2 ? ? A C 6 B G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A U 7 N3 ? ? ? 1_555 B G 4 O6 ? ? A U 7 B G 4 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog16 hydrog ? ? A U 7 O2 ? ? ? 1_555 B G 4 N1 ? ? A U 7 B G 4 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? A G 8 N1 ? ? ? 1_555 B U 3 O2 ? ? A G 8 B U 3 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog18 hydrog ? ? A G 8 O6 ? ? ? 1_555 B U 3 N3 ? ? A G 8 B U 3 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog19 hydrog ? ? A U 9 N3 ? ? ? 1_555 B G 2 O6 ? ? A U 9 B G 2 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog20 hydrog ? ? A U 9 O2 ? ? ? 1_555 B G 2 N1 ? ? A U 9 B G 2 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog21 hydrog ? ? A U 10 N3 ? ? ? 1_555 B G 1 O6 ? ? A U 10 B G 1 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog22 hydrog ? ? A U 10 O2 ? ? ? 1_555 B G 1 N1 ? ? A U 10 B G 1 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog23 hydrog ? ? C G 1 N1 ? ? ? 1_555 D U 10 O2 ? ? C G 1 D U 10 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog24 hydrog ? ? C G 1 O6 ? ? ? 1_555 D U 10 N3 ? ? C G 1 D U 10 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog25 hydrog ? ? C G 2 N1 ? ? ? 1_555 D U 9 O2 ? ? C G 2 D U 9 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog26 hydrog ? ? C G 2 O6 ? ? ? 1_555 D U 9 N3 ? ? C G 2 D U 9 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog27 hydrog ? ? C U 3 N3 ? ? ? 1_555 D G 8 O6 ? ? C U 3 D G 8 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog28 hydrog ? ? C U 3 O2 ? ? ? 1_555 D G 8 N1 ? ? C U 3 D G 8 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog29 hydrog ? ? C G 4 N1 ? ? ? 1_555 D U 7 O2 ? ? C G 4 D U 7 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog30 hydrog ? ? C G 4 O6 ? ? ? 1_555 D U 7 N3 ? ? C G 4 D U 7 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog31 hydrog ? ? C G 5 N1 ? ? ? 1_555 D C 6 N3 ? ? C G 5 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C G 5 N2 ? ? ? 1_555 D C 6 O2 ? ? C G 5 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C G 5 O6 ? ? ? 1_555 D C 6 N4 ? ? C G 5 D C 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C C 6 N3 ? ? ? 1_555 D G 5 N1 ? ? C C 6 D G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C C 6 N4 ? ? ? 1_555 D G 5 O6 ? ? C C 6 D G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? C C 6 O2 ? ? ? 1_555 D G 5 N2 ? ? C C 6 D G 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? C U 7 N3 ? ? ? 1_555 D G 4 O6 ? ? C U 7 D G 4 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog38 hydrog ? ? C U 7 O2 ? ? ? 1_555 D G 4 N1 ? ? C U 7 D G 4 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog39 hydrog ? ? C G 8 N1 ? ? ? 1_555 D U 3 O2 ? ? C G 8 D U 3 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog40 hydrog ? ? C G 8 O6 ? ? ? 1_555 D U 3 N3 ? ? C G 8 D U 3 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog41 hydrog ? ? C U 9 N3 ? ? ? 1_555 D G 2 O6 ? ? C U 9 D G 2 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog42 hydrog ? ? C U 9 O2 ? ? ? 1_555 D G 2 N1 ? ? C U 9 D G 2 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog43 hydrog ? ? C U 10 N3 ? ? ? 1_555 D G 1 O6 ? ? C U 10 D G 1 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog44 hydrog ? ? C U 10 O2 ? ? ? 1_555 D G 1 N1 ? ? C U 10 D G 1 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog45 hydrog ? ? E G 1 N1 A ? ? 1_555 E U 10 O2 A ? E G 1 E U 10 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog46 hydrog ? ? E G 1 O6 A ? ? 1_555 E U 10 N3 A ? E G 1 E U 10 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog47 hydrog ? ? E G 2 N1 A ? ? 1_555 E U 9 O2 A ? E G 2 E U 9 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog48 hydrog ? ? E G 2 O6 A ? ? 1_555 E U 9 N3 A ? E G 2 E U 9 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog49 hydrog ? ? E U 3 N3 A ? ? 1_555 E G 8 O6 A ? E U 3 E G 8 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog50 hydrog ? ? E U 3 O2 A ? ? 1_555 E G 8 N1 A ? E U 3 E G 8 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog51 hydrog ? ? E G 4 N1 ? ? ? 1_555 E U 7 O2 ? ? E G 4 E U 7 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog52 hydrog ? ? E G 4 O6 ? ? ? 1_555 E U 7 N3 ? ? E G 4 E U 7 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog53 hydrog ? ? E G 5 N1 ? ? ? 1_555 E C 6 N3 ? ? E G 5 E C 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? E G 5 N2 ? ? ? 1_555 E C 6 O2 ? ? E G 5 E C 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? E G 5 O6 ? ? ? 1_555 E C 6 N4 ? ? E G 5 E C 6 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? E C 6 N3 ? ? ? 1_555 E G 5 N1 ? ? E C 6 E G 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? E C 6 N4 ? ? ? 1_555 E G 5 O6 ? ? E C 6 E G 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? E C 6 O2 ? ? ? 1_555 E G 5 N2 ? ? E C 6 E G 5 2_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? E U 7 N3 ? ? ? 1_555 E G 4 O6 ? ? E U 7 E G 4 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog60 hydrog ? ? E U 7 O2 ? ? ? 1_555 E G 4 N1 ? ? E U 7 E G 4 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog61 hydrog ? ? E G 8 N1 A ? ? 1_555 E U 3 O2 A ? E G 8 E U 3 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog62 hydrog ? ? E G 8 O6 A ? ? 1_555 E U 3 N3 A ? E G 8 E U 3 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog63 hydrog ? ? E U 9 N3 A ? ? 1_555 E G 2 O6 A ? E U 9 E G 2 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog64 hydrog ? ? E U 9 O2 A ? ? 1_555 E G 2 N1 A ? E U 9 E G 2 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog65 hydrog ? ? E U 10 N3 A ? ? 1_555 E G 1 O6 A ? E U 10 E G 1 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog66 hydrog ? ? E U 10 O2 A ? ? 1_555 E G 1 N1 A ? E U 10 E G 1 2_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A NCO 101 ? 11 'binding site for residue NCO A 101' AC2 Software A NCO 102 ? 6 'binding site for residue NCO A 102' AC3 Software A NCO 103 ? 6 'binding site for residue NCO A 103' AC4 Software A CL 104 ? 3 'binding site for residue CL A 104' AC5 Software A CL 105 ? 3 'binding site for residue CL A 105' AC6 Software B NCO 101 ? 9 'binding site for residue NCO B 101' AC7 Software B NCO 102 ? 14 'binding site for residue NCO B 102' AC8 Software B NCO 103 ? 6 'binding site for residue NCO B 103' AC9 Software B CL 104 ? 3 'binding site for residue CL B 104' AD1 Software C NCO 101 ? 10 'binding site for residue NCO C 101' AD2 Software C NCO 102 ? 7 'binding site for residue NCO C 102' AD3 Software C NCO 103 ? 4 'binding site for residue NCO C 103' AD4 Software D NCO 101 ? 9 'binding site for residue NCO D 101' AD5 Software E NCO 101 ? 8 'binding site for residue NCO E 101' AD6 Software E NCO 102 ? 9 'binding site for residue NCO E 102' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 G A 1 ? G A 1 . ? 1_555 ? 2 AC1 11 G A 2 ? G A 2 . ? 1_555 ? 3 AC1 11 U A 3 ? U A 3 . ? 1_555 ? 4 AC1 11 U B 7 ? U B 7 . ? 1_555 ? 5 AC1 11 G B 8 ? G B 8 . ? 1_555 ? 6 AC1 11 U B 9 ? U B 9 . ? 1_555 ? 7 AC1 11 U B 10 ? U B 10 . ? 1_555 ? 8 AC1 11 CL N . ? CL B 104 . ? 1_555 ? 9 AC1 11 HOH V . ? HOH B 230 . ? 1_555 ? 10 AC1 11 HOH V . ? HOH B 236 . ? 1_555 ? 11 AC1 11 HOH Y . ? HOH E 203 . ? 4_555 ? 12 AC2 6 U A 9 ? U A 9 . ? 1_555 ? 13 AC2 6 U A 10 ? U A 10 . ? 1_555 ? 14 AC2 6 CL J . ? CL A 105 . ? 1_555 ? 15 AC2 6 HOH U . ? HOH A 210 . ? 1_555 ? 16 AC2 6 HOH U . ? HOH A 212 . ? 1_555 ? 17 AC2 6 G C 1 ? G C 1 . ? 1_555 ? 18 AC3 6 G A 4 ? G A 4 . ? 1_555 ? 19 AC3 6 G A 5 ? G A 5 . ? 1_555 ? 20 AC3 6 HOH U . ? HOH A 205 . ? 3_545 ? 21 AC3 6 HOH U . ? HOH A 215 . ? 1_555 ? 22 AC3 6 G C 1 ? G C 1 . ? 3_545 ? 23 AC3 6 G C 2 ? G C 2 . ? 3_545 ? 24 AC4 3 G A 2 ? G A 2 . ? 3_455 ? 25 AC4 3 U A 9 ? U A 9 . ? 1_555 ? 26 AC4 3 U B 9 ? U B 9 . ? 3_455 ? 27 AC5 3 NCO G . ? NCO A 102 . ? 1_555 ? 28 AC5 3 NCO K . ? NCO B 101 . ? 1_555 ? 29 AC5 3 NCO O . ? NCO C 101 . ? 1_555 ? 30 AC6 9 U A 7 ? U A 7 . ? 1_555 ? 31 AC6 9 G A 8 ? G A 8 . ? 1_555 ? 32 AC6 9 U A 9 ? U A 9 . ? 1_555 ? 33 AC6 9 U A 10 ? U A 10 . ? 1_555 ? 34 AC6 9 CL J . ? CL A 105 . ? 1_555 ? 35 AC6 9 G B 1 ? G B 1 . ? 1_555 ? 36 AC6 9 G B 2 ? G B 2 . ? 1_555 ? 37 AC6 9 U B 3 ? U B 3 . ? 1_555 ? 38 AC6 9 HOH V . ? HOH B 204 . ? 1_555 ? 39 AC7 14 U A 3 ? U A 3 . ? 1_555 ? 40 AC7 14 G A 4 ? G A 4 . ? 1_555 ? 41 AC7 14 G A 5 ? G A 5 . ? 1_555 ? 42 AC7 14 C A 6 ? C A 6 . ? 1_555 ? 43 AC7 14 HOH U . ? HOH A 222 . ? 1_555 ? 44 AC7 14 HOH U . ? HOH A 236 . ? 1_555 ? 45 AC7 14 U B 3 ? U B 3 . ? 1_555 ? 46 AC7 14 G B 4 ? G B 4 . ? 1_555 ? 47 AC7 14 G B 5 ? G B 5 . ? 1_555 ? 48 AC7 14 C B 6 ? C B 6 . ? 1_555 ? 49 AC7 14 HOH V . ? HOH B 209 . ? 1_555 ? 50 AC7 14 HOH V . ? HOH B 215 . ? 1_555 ? 51 AC7 14 HOH V . ? HOH B 236 . ? 1_555 ? 52 AC7 14 HOH V . ? HOH B 240 . ? 1_555 ? 53 AC8 6 U B 9 ? U B 9 . ? 1_555 ? 54 AC8 6 U B 10 ? U B 10 . ? 1_555 ? 55 AC8 6 CL N . ? CL B 104 . ? 1_555 ? 56 AC8 6 HOH V . ? HOH B 213 . ? 1_555 ? 57 AC8 6 HOH V . ? HOH B 246 . ? 1_555 ? 58 AC8 6 G E 1 ? G E 1 . ? 4_555 ? 59 AC9 3 NCO F . ? NCO A 101 . ? 1_555 ? 60 AC9 3 NCO M . ? NCO B 103 . ? 1_555 ? 61 AC9 3 NCO S . ? NCO E 101 . ? 4_555 ? 62 AD1 10 CL J . ? CL A 105 . ? 1_555 ? 63 AD1 10 G B 1 ? G B 1 . ? 1_555 ? 64 AD1 10 G C 1 ? G C 1 . ? 1_555 ? 65 AD1 10 G C 2 ? G C 2 . ? 1_555 ? 66 AD1 10 U D 7 ? U D 7 . ? 1_555 ? 67 AD1 10 U D 9 ? U D 9 . ? 1_555 ? 68 AD1 10 U D 10 ? U D 10 . ? 1_555 ? 69 AD1 10 HOH X . ? HOH D 210 . ? 1_555 ? 70 AD1 10 HOH X . ? HOH D 214 . ? 1_555 ? 71 AD1 10 HOH X . ? HOH D 223 . ? 1_555 ? 72 AD2 7 U C 3 ? U C 3 . ? 1_555 ? 73 AD2 7 G C 4 ? G C 4 . ? 1_555 ? 74 AD2 7 G C 5 ? G C 5 . ? 1_555 ? 75 AD2 7 HOH W . ? HOH C 205 . ? 1_555 ? 76 AD2 7 HOH W . ? HOH C 217 . ? 1_555 ? 77 AD2 7 G D 5 ? G D 5 . ? 1_555 ? 78 AD2 7 U D 7 ? U D 7 . ? 1_555 ? 79 AD3 4 U C 9 ? U C 9 . ? 1_555 ? 80 AD3 4 U C 10 ? U C 10 . ? 1_555 ? 81 AD3 4 HOH W . ? HOH C 226 . ? 1_555 ? 82 AD3 4 G D 1 ? G D 1 . ? 2_456 ? 83 AD4 9 U C 7 ? U C 7 . ? 1_555 ? 84 AD4 9 G C 8 ? G C 8 . ? 1_555 ? 85 AD4 9 U C 9 ? U C 9 . ? 1_555 ? 86 AD4 9 U C 10 ? U C 10 . ? 1_555 ? 87 AD4 9 G D 1 ? G D 1 . ? 1_555 ? 88 AD4 9 G D 2 ? G D 2 . ? 1_555 ? 89 AD4 9 U D 3 ? U D 3 . ? 1_555 ? 90 AD4 9 HOH X . ? HOH D 216 . ? 2_456 ? 91 AD4 9 HOH X . ? HOH D 216 . ? 1_555 ? 92 AD5 8 CL N . ? CL B 104 . ? 4_545 ? 93 AD5 8 G E 1 ? G E 1 . ? 1_555 ? 94 AD5 8 G E 2 ? G E 2 . ? 1_555 ? 95 AD5 8 U E 3 ? U E 3 . ? 1_555 ? 96 AD5 8 U E 7 ? U E 7 . ? 2_555 ? 97 AD5 8 G E 8 ? G E 8 . ? 2_555 ? 98 AD5 8 U E 9 ? U E 9 . ? 2_555 ? 99 AD5 8 U E 10 ? U E 10 . ? 2_555 ? 100 AD6 9 U E 3 ? U E 3 . ? 2_555 ? 101 AD6 9 G E 4 ? G E 4 . ? 2_555 ? 102 AD6 9 G E 5 ? G E 5 . ? 2_555 ? 103 AD6 9 G E 5 ? G E 5 . ? 1_555 ? 104 AD6 9 C E 6 ? C E 6 . ? 1_555 ? 105 AD6 9 HOH Y . ? HOH E 211 . ? 1_555 ? 106 AD6 9 HOH Y . ? HOH E 213 . ? 1_555 ? 107 AD6 9 HOH Y . ? HOH E 227 . ? 2_555 ? 108 AD6 9 HOH Y . ? HOH E 227 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 203 ? ? O A HOH 231 ? ? 1.98 2 1 O B HOH 202 ? ? O B HOH 219 ? ? 2.14 3 1 "O2'" E G 1 ? B O E HOH 201 ? ? 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_angle.auth_asym_id_1 E _pdbx_validate_rmsd_angle.auth_comp_id_1 U _pdbx_validate_rmsd_angle.auth_seq_id_1 3 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 A _pdbx_validate_rmsd_angle.auth_atom_id_2 P _pdbx_validate_rmsd_angle.auth_asym_id_2 E _pdbx_validate_rmsd_angle.auth_comp_id_2 G _pdbx_validate_rmsd_angle.auth_seq_id_2 4 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 OP2 _pdbx_validate_rmsd_angle.auth_asym_id_3 E _pdbx_validate_rmsd_angle.auth_comp_id_3 G _pdbx_validate_rmsd_angle.auth_seq_id_3 4 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.72 _pdbx_validate_rmsd_angle.angle_target_value 110.50 _pdbx_validate_rmsd_angle.angle_deviation 7.22 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.10 _pdbx_validate_rmsd_angle.linker_flag Y # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 D HOH 216 ? X HOH . 2 1 E HOH 222 ? Y HOH . 3 1 E HOH 227 ? Y HOH . # _phasing.method MAD # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal C OP3 O N N 1 C P P N N 2 C OP1 O N N 3 C OP2 O N N 4 C "O5'" O N N 5 C "C5'" C N N 6 C "C4'" C N R 7 C "O4'" O N N 8 C "C3'" C N S 9 C "O3'" O N N 10 C "C2'" C N R 11 C "O2'" O N N 12 C "C1'" C N R 13 C N1 N N N 14 C C2 C N N 15 C O2 O N N 16 C N3 N N N 17 C C4 C N N 18 C N4 N N N 19 C C5 C N N 20 C C6 C N N 21 C HOP3 H N N 22 C HOP2 H N N 23 C "H5'" H N N 24 C "H5''" H N N 25 C "H4'" H N N 26 C "H3'" H N N 27 C "HO3'" H N N 28 C "H2'" H N N 29 C "HO2'" H N N 30 C "H1'" H N N 31 C H41 H N N 32 C H42 H N N 33 C H5 H N N 34 C H6 H N N 35 CL CL CL N N 36 G OP3 O N N 37 G P P N N 38 G OP1 O N N 39 G OP2 O N N 40 G "O5'" O N N 41 G "C5'" C N N 42 G "C4'" C N R 43 G "O4'" O N N 44 G "C3'" C N S 45 G "O3'" O N N 46 G "C2'" C N R 47 G "O2'" O N N 48 G "C1'" C N R 49 G N9 N Y N 50 G C8 C Y N 51 G N7 N Y N 52 G C5 C Y N 53 G C6 C N N 54 G O6 O N N 55 G N1 N N N 56 G C2 C N N 57 G N2 N N N 58 G N3 N N N 59 G C4 C Y N 60 G HOP3 H N N 61 G HOP2 H N N 62 G "H5'" H N N 63 G "H5''" H N N 64 G "H4'" H N N 65 G "H3'" H N N 66 G "HO3'" H N N 67 G "H2'" H N N 68 G "HO2'" H N N 69 G "H1'" H N N 70 G H8 H N N 71 G H1 H N N 72 G H21 H N N 73 G H22 H N N 74 HOH O O N N 75 HOH H1 H N N 76 HOH H2 H N N 77 NCO CO CO N N 78 NCO N1 N N N 79 NCO N2 N N N 80 NCO N3 N N N 81 NCO N4 N N N 82 NCO N5 N N N 83 NCO N6 N N N 84 NCO HN11 H N N 85 NCO HN12 H N N 86 NCO HN13 H N N 87 NCO HN21 H N N 88 NCO HN22 H N N 89 NCO HN23 H N N 90 NCO HN31 H N N 91 NCO HN32 H N N 92 NCO HN33 H N N 93 NCO HN41 H N N 94 NCO HN42 H N N 95 NCO HN43 H N N 96 NCO HN51 H N N 97 NCO HN52 H N N 98 NCO HN53 H N N 99 NCO HN61 H N N 100 NCO HN62 H N N 101 NCO HN63 H N N 102 U OP3 O N N 103 U P P N N 104 U OP1 O N N 105 U OP2 O N N 106 U "O5'" O N N 107 U "C5'" C N N 108 U "C4'" C N R 109 U "O4'" O N N 110 U "C3'" C N S 111 U "O3'" O N N 112 U "C2'" C N R 113 U "O2'" O N N 114 U "C1'" C N R 115 U N1 N N N 116 U C2 C N N 117 U O2 O N N 118 U N3 N N N 119 U C4 C N N 120 U O4 O N N 121 U C5 C N N 122 U C6 C N N 123 U HOP3 H N N 124 U HOP2 H N N 125 U "H5'" H N N 126 U "H5''" H N N 127 U "H4'" H N N 128 U "H3'" H N N 129 U "HO3'" H N N 130 U "H2'" H N N 131 U "HO2'" H N N 132 U "H1'" H N N 133 U H3 H N N 134 U H5 H N N 135 U H6 H N N 136 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal C OP3 P sing N N 1 C OP3 HOP3 sing N N 2 C P OP1 doub N N 3 C P OP2 sing N N 4 C P "O5'" sing N N 5 C OP2 HOP2 sing N N 6 C "O5'" "C5'" sing N N 7 C "C5'" "C4'" sing N N 8 C "C5'" "H5'" sing N N 9 C "C5'" "H5''" sing N N 10 C "C4'" "O4'" sing N N 11 C "C4'" "C3'" sing N N 12 C "C4'" "H4'" sing N N 13 C "O4'" "C1'" sing N N 14 C "C3'" "O3'" sing N N 15 C "C3'" "C2'" sing N N 16 C "C3'" "H3'" sing N N 17 C "O3'" "HO3'" sing N N 18 C "C2'" "O2'" sing N N 19 C "C2'" "C1'" sing N N 20 C "C2'" "H2'" sing N N 21 C "O2'" "HO2'" sing N N 22 C "C1'" N1 sing N N 23 C "C1'" "H1'" sing N N 24 C N1 C2 sing N N 25 C N1 C6 sing N N 26 C C2 O2 doub N N 27 C C2 N3 sing N N 28 C N3 C4 doub N N 29 C C4 N4 sing N N 30 C C4 C5 sing N N 31 C N4 H41 sing N N 32 C N4 H42 sing N N 33 C C5 C6 doub N N 34 C C5 H5 sing N N 35 C C6 H6 sing N N 36 G OP3 P sing N N 37 G OP3 HOP3 sing N N 38 G P OP1 doub N N 39 G P OP2 sing N N 40 G P "O5'" sing N N 41 G OP2 HOP2 sing N N 42 G "O5'" "C5'" sing N N 43 G "C5'" "C4'" sing N N 44 G "C5'" "H5'" sing N N 45 G "C5'" "H5''" sing N N 46 G "C4'" "O4'" sing N N 47 G "C4'" "C3'" sing N N 48 G "C4'" "H4'" sing N N 49 G "O4'" "C1'" sing N N 50 G "C3'" "O3'" sing N N 51 G "C3'" "C2'" sing N N 52 G "C3'" "H3'" sing N N 53 G "O3'" "HO3'" sing N N 54 G "C2'" "O2'" sing N N 55 G "C2'" "C1'" sing N N 56 G "C2'" "H2'" sing N N 57 G "O2'" "HO2'" sing N N 58 G "C1'" N9 sing N N 59 G "C1'" "H1'" sing N N 60 G N9 C8 sing Y N 61 G N9 C4 sing Y N 62 G C8 N7 doub Y N 63 G C8 H8 sing N N 64 G N7 C5 sing Y N 65 G C5 C6 sing N N 66 G C5 C4 doub Y N 67 G C6 O6 doub N N 68 G C6 N1 sing N N 69 G N1 C2 sing N N 70 G N1 H1 sing N N 71 G C2 N2 sing N N 72 G C2 N3 doub N N 73 G N2 H21 sing N N 74 G N2 H22 sing N N 75 G N3 C4 sing N N 76 HOH O H1 sing N N 77 HOH O H2 sing N N 78 NCO CO N1 sing N N 79 NCO CO N2 sing N N 80 NCO CO N3 sing N N 81 NCO CO N4 sing N N 82 NCO CO N5 sing N N 83 NCO CO N6 sing N N 84 NCO N1 HN11 sing N N 85 NCO N1 HN12 sing N N 86 NCO N1 HN13 sing N N 87 NCO N2 HN21 sing N N 88 NCO N2 HN22 sing N N 89 NCO N2 HN23 sing N N 90 NCO N3 HN31 sing N N 91 NCO N3 HN32 sing N N 92 NCO N3 HN33 sing N N 93 NCO N4 HN41 sing N N 94 NCO N4 HN42 sing N N 95 NCO N4 HN43 sing N N 96 NCO N5 HN51 sing N N 97 NCO N5 HN52 sing N N 98 NCO N5 HN53 sing N N 99 NCO N6 HN61 sing N N 100 NCO N6 HN62 sing N N 101 NCO N6 HN63 sing N N 102 U OP3 P sing N N 103 U OP3 HOP3 sing N N 104 U P OP1 doub N N 105 U P OP2 sing N N 106 U P "O5'" sing N N 107 U OP2 HOP2 sing N N 108 U "O5'" "C5'" sing N N 109 U "C5'" "C4'" sing N N 110 U "C5'" "H5'" sing N N 111 U "C5'" "H5''" sing N N 112 U "C4'" "O4'" sing N N 113 U "C4'" "C3'" sing N N 114 U "C4'" "H4'" sing N N 115 U "O4'" "C1'" sing N N 116 U "C3'" "O3'" sing N N 117 U "C3'" "C2'" sing N N 118 U "C3'" "H3'" sing N N 119 U "O3'" "HO3'" sing N N 120 U "C2'" "O2'" sing N N 121 U "C2'" "C1'" sing N N 122 U "C2'" "H2'" sing N N 123 U "O2'" "HO2'" sing N N 124 U "C1'" N1 sing N N 125 U "C1'" "H1'" sing N N 126 U N1 C2 sing N N 127 U N1 C6 sing N N 128 U C2 O2 doub N N 129 U C2 N3 sing N N 130 U N3 C4 sing N N 131 U N3 H3 sing N N 132 U C4 O4 doub N N 133 U C4 C5 sing N N 134 U C5 C6 doub N N 135 U C5 H5 sing N N 136 U C6 H6 sing N N 137 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4PCO 'double helix' 4PCO 'a-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A G 1 1_555 B U 10 1_555 -2.331 -0.621 0.027 -2.794 -16.020 -4.501 1 A_G1:U10_B A 1 ? B 10 ? 28 1 1 A G 2 1_555 B U 9 1_555 -2.070 -0.487 0.010 -4.504 -13.416 0.564 2 A_G2:U9_B A 2 ? B 9 ? 28 1 1 A U 3 1_555 B G 8 1_555 2.373 -0.575 0.089 -1.148 -12.527 -1.655 3 A_U3:G8_B A 3 ? B 8 ? 28 1 1 A G 4 1_555 B U 7 1_555 -2.251 -0.551 0.244 -1.848 -15.299 -0.763 4 A_G4:U7_B A 4 ? B 7 ? 28 1 1 A G 5 1_555 B C 6 1_555 -0.213 -0.186 0.335 4.449 -12.918 -4.253 5 A_G5:C6_B A 5 ? B 6 ? 19 1 1 A C 6 1_555 B G 5 1_555 0.217 -0.095 0.050 9.184 -15.300 -0.255 6 A_C6:G5_B A 6 ? B 5 ? 19 1 1 A U 7 1_555 B G 4 1_555 2.341 -0.587 0.022 3.220 -19.080 -1.316 7 A_U7:G4_B A 7 ? B 4 ? 28 1 1 A G 8 1_555 B U 3 1_555 -2.357 -0.528 0.199 -2.447 -10.678 -0.474 8 A_G8:U3_B A 8 ? B 3 ? 28 1 1 A U 9 1_555 B G 2 1_555 2.219 -0.532 0.192 2.610 -13.554 -2.849 9 A_U9:G2_B A 9 ? B 2 ? 28 1 1 A U 10 1_555 B G 1 1_555 2.300 -0.590 0.088 2.808 -15.158 -1.547 10 A_U10:G1_B A 10 ? B 1 ? 28 1 1 C G 1 1_555 D U 10 1_555 -2.270 -0.613 -0.272 -6.144 -6.955 -5.502 11 C_G1:U10_D C 1 ? D 10 ? 28 1 1 C G 2 1_555 D U 9 1_555 -2.355 -0.567 0.205 3.925 -10.662 -5.242 12 C_G2:U9_D C 2 ? D 9 ? 28 1 1 C U 3 1_555 D G 8 1_555 2.318 -0.658 0.123 1.900 -14.719 -4.064 13 C_U3:G8_D C 3 ? D 8 ? 28 1 1 C G 4 1_555 D U 7 1_555 -2.291 -0.562 -0.282 -11.381 -15.040 0.833 14 C_G4:U7_D C 4 ? D 7 ? 28 1 1 C G 5 1_555 D C 6 1_555 -0.265 -0.083 -0.093 -9.699 -9.415 -0.982 15 C_G5:C6_D C 5 ? D 6 ? 19 1 1 C C 6 1_555 D G 5 1_555 0.114 -0.028 0.259 -2.708 -10.548 0.550 16 C_C6:G5_D C 6 ? D 5 ? 19 1 1 C U 7 1_555 D G 4 1_555 2.385 -0.537 -0.167 3.701 -10.827 -0.440 17 C_U7:G4_D C 7 ? D 4 ? 28 1 1 C G 8 1_555 D U 3 1_555 -2.273 -0.460 0.185 0.834 -10.015 -1.517 18 C_G8:U3_D C 8 ? D 3 ? 28 1 1 C U 9 1_555 D G 2 1_555 2.271 -0.504 0.109 3.433 -14.865 0.789 19 C_U9:G2_D C 9 ? D 2 ? 28 1 1 C U 10 1_555 D G 1 1_555 2.431 -0.581 -0.094 9.088 -12.570 0.314 20 C_U10:G1_D C 10 ? D 1 ? 28 1 1 E G 1 1_555 E U 10 2_555 -2.121 -0.501 0.034 -6.306 -13.847 -3.910 21 E_G1:U10_E E 1 ? E 10 ? 28 1 1 E G 2 1_555 E U 9 2_555 -2.132 -0.480 0.038 -5.183 -10.673 -0.455 22 E_G2:U9_E E 2 ? E 9 ? 28 1 1 E U 3 1_555 E G 8 2_555 2.224 -0.505 -0.029 4.890 -4.799 -10.168 23 E_U3:G8_E E 3 ? E 8 ? 28 1 1 E G 4 1_555 E U 7 2_555 -2.281 -0.559 -0.010 -3.801 -13.334 0.321 24 E_G4:U7_E E 4 ? E 7 ? 28 1 1 E G 5 1_555 E C 6 2_555 -0.206 -0.151 0.093 -0.861 -11.698 -2.015 25 E_G5:C6_E E 5 ? E 6 ? 19 1 1 E C 6 1_555 E G 5 2_555 0.206 -0.151 0.093 0.861 -11.698 -2.015 26 E_C6:G5_E E 6 ? E 5 ? 19 1 1 E U 7 1_555 E G 4 2_555 2.281 -0.559 -0.010 3.801 -13.334 0.321 27 E_U7:G4_E E 7 ? E 4 ? 28 1 1 E G 8 1_555 E U 3 2_555 -2.224 -0.505 -0.029 -4.890 -4.799 -10.168 28 E_G8:U3_E E 8 ? E 3 ? 28 1 1 E U 9 1_555 E G 2 2_555 2.132 -0.480 0.038 5.183 -10.673 -0.455 29 E_U9:G2_E E 9 ? E 2 ? 28 1 1 E U 10 1_555 E G 1 2_555 2.121 -0.501 0.034 6.305 -13.847 -3.910 30 E_U10:G1_E E 10 ? E 1 ? 28 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A G 1 1_555 B U 10 1_555 A G 2 1_555 B U 9 1_555 -0.246 -1.918 3.155 -7.094 9.542 35.187 -4.165 -0.467 2.567 15.256 11.341 37.081 1 AA_G1G2:U9U10_BB A 1 ? B 10 ? A 2 ? B 9 ? 1 A G 2 1_555 B U 9 1_555 A U 3 1_555 B G 8 1_555 -0.124 -1.139 3.128 -0.178 7.036 48.682 -1.863 0.137 2.947 8.484 0.214 49.157 2 AA_G2U3:G8U9_BB A 2 ? B 9 ? A 3 ? B 8 ? 1 A U 3 1_555 B G 8 1_555 A G 4 1_555 B U 7 1_555 0.655 -1.951 2.855 2.661 12.581 18.375 -8.323 -0.989 1.338 34.451 -7.287 22.396 3 AA_U3G4:U7G8_BB A 3 ? B 8 ? A 4 ? B 7 ? 1 A G 4 1_555 B U 7 1_555 A G 5 1_555 B C 6 1_555 -0.650 -1.152 3.040 -2.918 3.938 40.071 -2.078 0.639 2.957 5.721 4.239 40.357 4 AA_G4G5:C6U7_BB A 4 ? B 7 ? A 5 ? B 6 ? 1 A G 5 1_555 B C 6 1_555 A C 6 1_555 B G 5 1_555 0.565 -1.205 3.060 2.621 6.136 33.764 -2.909 -0.584 2.838 10.437 -4.459 34.399 5 AA_G5C6:G5C6_BB A 5 ? B 6 ? A 6 ? B 5 ? 1 A C 6 1_555 B G 5 1_555 A U 7 1_555 B G 4 1_555 0.559 -1.545 3.318 2.269 5.374 42.283 -2.659 -0.542 3.132 7.408 -3.128 42.665 6 AA_C6U7:G4G5_BB A 6 ? B 5 ? A 7 ? B 4 ? 1 A U 7 1_555 B G 4 1_555 A G 8 1_555 B U 3 1_555 -0.887 -2.417 2.866 -4.069 15.912 15.041 -9.843 1.386 0.387 46.304 11.842 22.236 7 AA_U7G8:U3G4_BB A 7 ? B 4 ? A 8 ? B 3 ? 1 A G 8 1_555 B U 3 1_555 A U 9 1_555 B G 2 1_555 -0.213 -1.026 3.120 -1.452 7.128 48.799 -1.727 0.154 2.957 8.572 1.746 49.305 8 AA_G8U9:G2U3_BB A 8 ? B 3 ? A 9 ? B 2 ? 1 A U 9 1_555 B G 2 1_555 A U 10 1_555 B G 1 1_555 0.317 -1.786 3.081 6.133 5.951 33.705 -3.816 0.318 2.750 10.064 -10.371 34.741 9 AA_U9U10:G1G2_BB A 9 ? B 2 ? A 10 ? B 1 ? 1 A U 10 1_555 B G 1 1_555 C G 1 1_555 D U 10 1_555 -0.333 -4.525 3.550 1.077 7.482 -38.468 5.660 -0.339 4.329 -11.224 1.616 -39.176 10 AC_U10G1:U10G1_DB A 10 ? B 1 ? C 1 ? D 10 ? 1 C G 1 1_555 D U 10 1_555 C G 2 1_555 D U 9 1_555 -0.292 -1.357 2.980 -7.697 2.312 31.509 -2.793 -0.701 2.865 4.174 13.893 32.493 11 CC_G1G2:U9U10_DD C 1 ? D 10 ? C 2 ? D 9 ? 1 C G 2 1_555 D U 9 1_555 C U 3 1_555 D G 8 1_555 -0.105 -1.155 3.294 0.360 7.097 51.955 -1.767 0.142 3.122 8.058 -0.409 52.405 12 CC_G2U3:G8U9_DD C 2 ? D 9 ? C 3 ? D 8 ? 1 C U 3 1_555 D G 8 1_555 C G 4 1_555 D U 7 1_555 1.381 -1.942 3.156 8.603 15.456 21.019 -7.377 -1.090 1.776 35.359 -19.680 27.408 13 CC_U3G4:U7G8_DD C 3 ? D 8 ? C 4 ? D 7 ? 1 C G 4 1_555 D U 7 1_555 C G 5 1_555 D C 6 1_555 -0.371 -1.618 3.183 -2.477 5.885 38.798 -3.065 0.274 2.934 8.786 3.699 39.300 14 CC_G4G5:C6U7_DD C 4 ? D 7 ? C 5 ? D 6 ? 1 C G 5 1_555 D C 6 1_555 C C 6 1_555 D G 5 1_555 0.618 -1.677 3.100 0.760 4.558 32.416 -3.696 -0.977 2.858 8.113 -1.353 32.735 15 CC_G5C6:G5C6_DD C 5 ? D 6 ? C 6 ? D 5 ? 1 C C 6 1_555 D G 5 1_555 C U 7 1_555 D G 4 1_555 0.702 -1.695 3.108 6.087 -0.887 38.517 -2.435 -0.337 3.215 -1.335 -9.156 38.986 16 CC_C6U7:G4G5_DD C 6 ? D 5 ? C 7 ? D 4 ? 1 C U 7 1_555 D G 4 1_555 C G 8 1_555 D U 3 1_555 -0.952 -2.753 3.047 -4.408 10.093 13.629 -13.370 1.239 1.034 35.827 15.646 17.506 17 CC_U7G8:U3G4_DD C 7 ? D 4 ? C 8 ? D 3 ? 1 C G 8 1_555 D U 3 1_555 C U 9 1_555 D G 2 1_555 0.131 -1.147 3.133 -0.477 8.065 50.055 -1.871 -0.185 2.926 9.461 0.559 50.662 18 CC_G8U9:G2U3_DD C 8 ? D 3 ? C 9 ? D 2 ? 1 C U 9 1_555 D G 2 1_555 C U 10 1_555 D G 1 1_555 0.240 -1.805 2.962 7.311 7.144 33.671 -3.906 0.541 2.534 11.994 -12.274 35.146 19 CC_U9U10:G1G2_DD C 9 ? D 2 ? C 10 ? D 1 ? 1 E G 1 1_555 E U 10 2_555 E G 2 1_555 E U 9 2_555 0.017 -2.050 3.069 -4.856 8.503 35.735 -4.222 -0.594 2.509 13.546 7.736 37.010 20 EE_G1G2:U9U10_EE E 1 ? E 10 ? E 2 ? E 9 ? 1 E G 2 1_555 E U 9 2_555 E U 3 1_555 E G 8 2_555 -0.401 -1.204 3.012 0.743 6.981 47.010 -1.998 0.551 2.810 8.695 -0.925 47.502 21 EE_G2U3:G8U9_EE E 2 ? E 9 ? E 3 ? E 8 ? 1 E U 3 1_555 E G 8 2_555 E G 4 1_555 E U 7 2_555 1.623 -2.121 3.014 3.687 16.753 15.379 -9.405 -3.171 0.745 47.291 -10.407 23.000 22 EE_U3G4:U7G8_EE E 3 ? E 8 ? E 4 ? E 7 ? 1 E G 4 1_555 E U 7 2_555 E G 5 1_555 E C 6 2_555 -0.657 -1.203 3.189 -3.264 5.704 38.593 -2.452 0.607 3.031 8.555 4.895 39.127 23 EE_G4G5:C6U7_EE E 4 ? E 7 ? E 5 ? E 6 ? 1 E G 5 1_555 E C 6 2_555 E C 6 1_555 E G 5 2_555 0.000 -1.155 3.171 0.000 13.495 35.708 -3.327 0.000 2.583 21.102 0.000 38.095 24 EE_G5C6:G5C6_EE E 5 ? E 6 ? E 6 ? E 5 ? 1 E C 6 1_555 E G 5 2_555 E U 7 1_555 E G 4 2_555 0.657 -1.203 3.189 3.264 5.704 38.593 -2.452 -0.607 3.031 8.555 -4.895 39.127 25 EE_C6U7:G4G5_EE E 6 ? E 5 ? E 7 ? E 4 ? 1 E U 7 1_555 E G 4 2_555 E G 8 1_555 E U 3 2_555 -1.623 -2.121 3.014 -3.687 16.753 15.379 -9.405 3.171 0.745 47.291 10.407 23.000 26 EE_U7G8:U3G4_EE E 7 ? E 4 ? E 8 ? E 3 ? 1 E G 8 1_555 E U 3 2_555 E U 9 1_555 E G 2 2_555 0.401 -1.204 3.012 -0.743 6.981 47.010 -1.998 -0.551 2.810 8.695 0.925 47.502 27 EE_G8U9:G2U3_EE E 8 ? E 3 ? E 9 ? E 2 ? 1 E U 9 1_555 E G 2 2_555 E U 10 1_555 E G 1 2_555 -0.017 -2.050 3.069 4.856 8.503 35.735 -4.222 0.594 2.509 13.546 -7.736 37.010 28 EE_U9U10:G1G2_EE E 9 ? E 2 ? E 10 ? E 1 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01-AI088011 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 4PCO _atom_sites.fract_transf_matrix[1][1] 0.027310 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.006045 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023135 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012302 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL CO H N O P # loop_