HEADER SUGAR BINDING PROTEIN 16-APR-14 4PCR TITLE CRYSTAL STRUCTURE OF CANAVALIA BRASILIENSIS SEED LECTIN (CONBR) TITLE 2 COMPLEXED WITH GAMMA-AMINOBUTYRIC ACID (GABA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONCANAVALIN-BR; COMPND 3 CHAIN: A, D; COMPND 4 SYNONYM: CON BR SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANAVALIA BRASILIENSIS; SOURCE 3 ORGANISM_COMMON: BRAZILIAN JACK BEAN; SOURCE 4 ORGANISM_TAXID: 61861 KEYWDS SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR P.DELATORRE,B.A.M.ROCHA,J.C.SILVA-FILHO,C.S.TEIXEIRA,B.S.CAVADA, AUTHOR 2 K.S.NASCIMENTO,R.B.NBREGA,C.S.NAGANO,A.H.SAMPAIO,R.B.LEAL,I.L.B.NETO REVDAT 4 15-NOV-23 4PCR 1 ATOM REVDAT 3 27-SEP-23 4PCR 1 REMARK LINK REVDAT 2 14-OCT-15 4PCR 1 REMARK REVDAT 1 22-APR-15 4PCR 0 JRNL AUTH P.DELATORRE,B.A.M.ROCHA,J.C.SILVA-FILHO,C.S.TEIXEIRA, JRNL AUTH 2 B.S.CAVADA,K.S.NASCIMENTO,R.B.NBREGA,C.S.NAGANO,A.H.SAMPAIO, JRNL AUTH 3 R.B.LEAL,I.L.B.NETO JRNL TITL CRYSTAL STRUCTURE OF CANAVALIA BRASILIENSIS SEED LECTIN JRNL TITL 2 (CONBR) COMPLEXED WITH GAMMA-AMINOBUTYRIC ACID (GABA) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 89.3 REMARK 3 NUMBER OF REFLECTIONS : 21260 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.300 REMARK 3 FREE R VALUE TEST SET COUNT : 2431 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1497 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 85.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2800 REMARK 3 BIN FREE R VALUE SET COUNT : 181 REMARK 3 BIN FREE R VALUE : 0.3940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3548 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 96 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.06000 REMARK 3 B22 (A**2) : 6.63000 REMARK 3 B33 (A**2) : 1.43000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -15.91000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.047 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.143 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.911 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.957 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3676 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3447 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4982 ; 1.954 ; 1.953 REMARK 3 BOND ANGLES OTHERS (DEGREES): 7942 ; 1.336 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 462 ; 8.364 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 149 ;34.838 ;24.497 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 570 ;14.772 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;12.831 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 568 ; 0.115 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4156 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 830 ; 0.005 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1863 ; 2.670 ; 2.728 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1862 ; 2.665 ; 2.728 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2318 ; 3.029 ; 4.074 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 2319 ; 3.028 ; 4.074 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1813 ; 3.242 ; 2.867 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1813 ; 3.243 ; 2.867 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2665 ; 3.572 ; 4.225 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 15575 ; 3.390 ;25.962 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 15576 ; 3.391 ;25.962 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 7123 ; 5.275 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 59 ;10.785 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 7101 ; 5.161 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.579 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : H+4/2L, -K, -L REMARK 3 TWIN FRACTION : 0.421 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 237 REMARK 3 ORIGIN FOR THE GROUP (A): -2.8121 -0.8142 22.3464 REMARK 3 T TENSOR REMARK 3 T11: 0.1096 T22: 0.0189 REMARK 3 T33: 0.1929 T12: -0.0007 REMARK 3 T13: 0.0679 T23: 0.0423 REMARK 3 L TENSOR REMARK 3 L11: 0.8286 L22: 1.3888 REMARK 3 L33: 0.7287 L12: 0.1857 REMARK 3 L13: 0.3298 L23: 0.2868 REMARK 3 S TENSOR REMARK 3 S11: 0.0139 S12: 0.0358 S13: 0.0684 REMARK 3 S21: -0.1798 S22: -0.0469 S23: -0.3211 REMARK 3 S31: -0.0382 S32: -0.0325 S33: 0.0329 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 237 REMARK 3 ORIGIN FOR THE GROUP (A): -20.4335 -28.9522 9.9480 REMARK 3 T TENSOR REMARK 3 T11: 0.2517 T22: 0.0200 REMARK 3 T33: 0.0265 T12: 0.0452 REMARK 3 T13: -0.0023 T23: -0.0144 REMARK 3 L TENSOR REMARK 3 L11: 1.0263 L22: 1.6465 REMARK 3 L33: 1.0350 L12: 0.2118 REMARK 3 L13: 0.6295 L23: 0.1350 REMARK 3 S TENSOR REMARK 3 S11: 0.0743 S12: 0.1150 S13: -0.0946 REMARK 3 S21: -0.4025 S22: -0.0471 S23: -0.0498 REMARK 3 S31: 0.0570 S32: 0.0756 S33: -0.0273 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4PCR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000201000. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : LNLS REMARK 200 BEAMLINE : D03B-MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.430 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 5.8.0069 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23808 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 20.640 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.3 REMARK 200 DATA REDUNDANCY : 2.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.27 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.31000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 3JU9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.79 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.40 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TRIS 0.1 M PH 9.0, AMONIUM SULFATE 2.2 REMARK 280 M, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.20500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.06500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.20500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.06500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4800 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18160 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -35.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32900 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -87.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -38.70701 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 56.38226 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 120 REMARK 465 HIS A 121 REMARK 465 GLU A 122 REMARK 465 ASN D 118 REMARK 465 SER D 119 REMARK 465 THR D 120 REMARK 465 HIS D 121 REMARK 465 GLU D 122 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 ASP A 10 OD2 95.9 REMARK 620 3 ASP A 19 OD1 163.8 99.7 REMARK 620 4 HIS A 24 NE2 94.4 86.6 91.1 REMARK 620 5 HOH A 422 O 84.7 94.6 89.5 178.5 REMARK 620 6 HOH A 441 O 87.8 170.0 77.6 83.7 95.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 10 OD1 REMARK 620 2 ASP A 10 OD2 49.5 REMARK 620 3 TYR A 12 O 66.1 107.3 REMARK 620 4 ASN A 14 OD1 140.8 166.7 77.7 REMARK 620 5 ASP A 19 OD2 97.6 79.7 79.0 89.4 REMARK 620 6 HOH A 444 O 71.3 98.7 88.1 93.7 165.7 REMARK 620 7 HOH A 446 O 125.4 86.2 166.5 89.2 104.5 89.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D 302 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 8 OE2 REMARK 620 2 ASP D 10 OD2 93.1 REMARK 620 3 ASP D 19 OD1 161.9 104.9 REMARK 620 4 HIS D 24 NE2 91.4 87.7 91.3 REMARK 620 5 HOH D 423 O 83.9 95.2 92.3 174.7 REMARK 620 6 HOH D 443 O 91.8 173.7 70.4 88.1 89.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA D 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 10 OD1 REMARK 620 2 ASP D 10 OD2 49.9 REMARK 620 3 TYR D 12 O 65.0 107.3 REMARK 620 4 ASN D 14 OD1 134.0 171.4 72.5 REMARK 620 5 ASP D 19 OD2 106.3 88.7 80.7 82.7 REMARK 620 6 HOH D 447 O 71.9 102.5 82.3 86.1 161.8 REMARK 620 7 HOH D 448 O 126.0 86.1 166.5 94.4 101.4 93.6 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ABU A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ABU A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue CA D 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MN D 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA D 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ABU D 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO D 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG D 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue PEG D 308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4I30 RELATED DB: PDB DBREF 4PCR A 1 237 UNP P55915 CONA_CANBR 1 237 DBREF 4PCR D 1 237 UNP P55915 CONA_CANBR 1 237 SEQRES 1 A 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 A 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 A 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 A 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 A 237 ILE TYR ASN SER VAL GLY LYS ARG LEU SER ALA VAL VAL SEQRES 6 A 237 SER TYR PRO ASN GLY ASP SER ALA THR VAL SER TYR ASP SEQRES 7 A 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 A 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 A 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 A 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 A 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 A 237 GLY ASP ALA THR THR GLY THR GLU GLY ASN LEU ARG LEU SEQRES 13 A 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 A 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 A 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 A 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 A 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 A 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 A 237 ASP ALA ASN SEQRES 1 D 237 ALA ASP THR ILE VAL ALA VAL GLU LEU ASP THR TYR PRO SEQRES 2 D 237 ASN THR ASP ILE GLY ASP PRO SER TYR PRO HIS ILE GLY SEQRES 3 D 237 ILE ASP ILE LYS SER VAL ARG SER LYS LYS THR ALA LYS SEQRES 4 D 237 TRP ASN MET GLN ASN GLY LYS VAL GLY THR ALA HIS ILE SEQRES 5 D 237 ILE TYR ASN SER VAL GLY LYS ARG LEU SER ALA VAL VAL SEQRES 6 D 237 SER TYR PRO ASN GLY ASP SER ALA THR VAL SER TYR ASP SEQRES 7 D 237 VAL ASP LEU ASP ASN VAL LEU PRO GLU TRP VAL ARG VAL SEQRES 8 D 237 GLY LEU SER ALA SER THR GLY LEU TYR LYS GLU THR ASN SEQRES 9 D 237 THR ILE LEU SER TRP SER PHE THR SER LYS LEU LYS SER SEQRES 10 D 237 ASN SER THR HIS GLU THR ASN ALA LEU HIS PHE MET PHE SEQRES 11 D 237 ASN GLN PHE SER LYS ASP GLN LYS ASP LEU ILE LEU GLN SEQRES 12 D 237 GLY ASP ALA THR THR GLY THR GLU GLY ASN LEU ARG LEU SEQRES 13 D 237 THR ARG VAL SER SER ASN GLY SER PRO GLN GLY SER SER SEQRES 14 D 237 VAL GLY ARG ALA LEU PHE TYR ALA PRO VAL HIS ILE TRP SEQRES 15 D 237 GLU SER SER ALA VAL VAL ALA SER PHE GLU ALA THR PHE SEQRES 16 D 237 THR PHE LEU ILE LYS SER PRO ASP SER HIS PRO ALA ASP SEQRES 17 D 237 GLY ILE ALA PHE PHE ILE SER ASN ILE ASP SER SER ILE SEQRES 18 D 237 PRO SER GLY SER THR GLY ARG LEU LEU GLY LEU PHE PRO SEQRES 19 D 237 ASP ALA ASN HET CA A 301 1 HET MN A 302 1 HET IPA A 303 4 HET ABU A 304 7 HET ABU A 305 7 HET PEG A 306 7 HET CA D 301 1 HET MN D 302 1 HET IPA D 303 4 HET ABU D 304 7 HET EDO D 305 4 HET EDO D 306 4 HET PEG D 307 7 HET PEG D 308 7 HETNAM CA CALCIUM ION HETNAM MN MANGANESE (II) ION HETNAM IPA ISOPROPYL ALCOHOL HETNAM ABU GAMMA-AMINO-BUTANOIC ACID HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM EDO 1,2-ETHANEDIOL HETSYN IPA 2-PROPANOL HETSYN ABU GAMMA(AMINO)-BUTYRIC ACID HETSYN EDO ETHYLENE GLYCOL FORMUL 3 CA 2(CA 2+) FORMUL 4 MN 2(MN 2+) FORMUL 5 IPA 2(C3 H8 O) FORMUL 6 ABU 3(C4 H9 N O2) FORMUL 8 PEG 3(C4 H10 O3) FORMUL 13 EDO 2(C2 H6 O2) FORMUL 17 HOH *96(H2 O) HELIX 1 AA1 ASN A 14 GLY A 18 5 5 HELIX 2 AA2 ASP A 80 VAL A 84 5 5 HELIX 3 AA3 THR A 226 LEU A 230 5 5 HELIX 4 AA4 ASN D 14 GLY D 18 5 5 HELIX 5 AA5 ASP D 80 VAL D 84 5 5 HELIX 6 AA6 THR D 226 LEU D 230 5 5 SHEET 1 AA1 7 LYS A 36 LYS A 39 0 SHEET 2 AA1 7 HIS A 24 ILE A 29 -1 N ILE A 27 O LYS A 36 SHEET 3 AA1 7 ILE A 4 ASP A 10 -1 N ASP A 10 O HIS A 24 SHEET 4 AA1 7 GLY A 209 SER A 215 -1 O ILE A 210 N LEU A 9 SHEET 5 AA1 7 TRP A 88 SER A 96 -1 N SER A 94 O ALA A 211 SHEET 6 AA1 7 VAL A 170 PHE A 175 -1 O ALA A 173 N LEU A 93 SHEET 7 AA1 7 LEU A 140 GLY A 144 -1 N GLN A 143 O ARG A 172 SHEET 1 AA2 6 LYS A 36 LYS A 39 0 SHEET 2 AA2 6 HIS A 24 ILE A 29 -1 N ILE A 27 O LYS A 36 SHEET 3 AA2 6 ILE A 4 ASP A 10 -1 N ASP A 10 O HIS A 24 SHEET 4 AA2 6 GLY A 209 SER A 215 -1 O ILE A 210 N LEU A 9 SHEET 5 AA2 6 TRP A 88 SER A 96 -1 N SER A 94 O ALA A 211 SHEET 6 AA2 6 VAL A 179 HIS A 180 -1 O VAL A 179 N VAL A 89 SHEET 1 AA312 SER A 72 ASP A 78 0 SHEET 2 AA312 ARG A 60 SER A 66 -1 N ALA A 63 O VAL A 75 SHEET 3 AA312 VAL A 47 ASN A 55 -1 N ILE A 53 O SER A 62 SHEET 4 AA312 ALA A 186 LEU A 198 -1 O PHE A 191 N TYR A 54 SHEET 5 AA312 THR A 105 SER A 117 -1 N SER A 110 O THR A 194 SHEET 6 AA312 ASN A 124 PHE A 130 -1 O PHE A 130 N TRP A 109 SHEET 7 AA312 ASN D 124 PHE D 130 -1 O HIS D 127 N HIS A 127 SHEET 8 AA312 THR D 105 LYS D 116 -1 N TRP D 109 O PHE D 130 SHEET 9 AA312 VAL D 188 LEU D 198 -1 O THR D 194 N SER D 110 SHEET 10 AA312 VAL D 47 ASN D 55 -1 N ILE D 52 O ALA D 193 SHEET 11 AA312 ARG D 60 SER D 66 -1 O VAL D 64 N HIS D 51 SHEET 12 AA312 SER D 72 ASP D 78 -1 O TYR D 77 N LEU D 61 SHEET 1 AA4 8 THR A 147 THR A 148 0 SHEET 2 AA4 8 LEU A 154 ARG A 155 -1 O ARG A 155 N THR A 147 SHEET 3 AA4 8 THR A 105 SER A 117 -1 N ILE A 106 O LEU A 154 SHEET 4 AA4 8 ASN A 124 PHE A 130 -1 O PHE A 130 N TRP A 109 SHEET 5 AA4 8 ASN D 124 PHE D 130 -1 O HIS D 127 N HIS A 127 SHEET 6 AA4 8 THR D 105 LYS D 116 -1 N TRP D 109 O PHE D 130 SHEET 7 AA4 8 LEU D 154 ARG D 155 -1 O LEU D 154 N ILE D 106 SHEET 8 AA4 8 THR D 147 THR D 148 -1 N THR D 147 O ARG D 155 SHEET 1 AA5 2 VAL A 159 SER A 160 0 SHEET 2 AA5 2 SER A 164 PRO A 165 -1 O SER A 164 N SER A 160 SHEET 1 AA6 7 LYS D 36 LYS D 39 0 SHEET 2 AA6 7 HIS D 24 ILE D 29 -1 N ILE D 25 O ALA D 38 SHEET 3 AA6 7 ILE D 4 ASP D 10 -1 N ALA D 6 O ASP D 28 SHEET 4 AA6 7 GLY D 209 SER D 215 -1 O ILE D 210 N LEU D 9 SHEET 5 AA6 7 TRP D 88 SER D 96 -1 N SER D 94 O ALA D 211 SHEET 6 AA6 7 VAL D 170 PHE D 175 -1 O PHE D 175 N VAL D 91 SHEET 7 AA6 7 LEU D 140 GLY D 144 -1 N GLN D 143 O ARG D 172 SHEET 1 AA7 6 LYS D 36 LYS D 39 0 SHEET 2 AA7 6 HIS D 24 ILE D 29 -1 N ILE D 25 O ALA D 38 SHEET 3 AA7 6 ILE D 4 ASP D 10 -1 N ALA D 6 O ASP D 28 SHEET 4 AA7 6 GLY D 209 SER D 215 -1 O ILE D 210 N LEU D 9 SHEET 5 AA7 6 TRP D 88 SER D 96 -1 N SER D 94 O ALA D 211 SHEET 6 AA7 6 VAL D 179 HIS D 180 -1 O VAL D 179 N VAL D 89 LINK OE2 GLU A 8 MN MN A 302 1555 1555 2.28 LINK OD1 ASP A 10 CA CA A 301 1555 1555 2.64 LINK OD2 ASP A 10 CA CA A 301 1555 1555 2.67 LINK OD2 ASP A 10 MN MN A 302 1555 1555 2.13 LINK O TYR A 12 CA CA A 301 1555 1555 2.32 LINK OD1 ASN A 14 CA CA A 301 1555 1555 2.36 LINK OD2 ASP A 19 CA CA A 301 1555 1555 2.43 LINK OD1 ASP A 19 MN MN A 302 1555 1555 2.33 LINK NE2 HIS A 24 MN MN A 302 1555 1555 2.10 LINK CA CA A 301 O HOH A 444 1555 1555 2.41 LINK CA CA A 301 O HOH A 446 1555 1555 2.27 LINK MN MN A 302 O HOH A 422 1555 1555 1.97 LINK MN MN A 302 O HOH A 441 1555 1555 2.00 LINK OE2 GLU D 8 MN MN D 302 1555 1555 2.21 LINK OD1 ASP D 10 CA CA D 301 1555 1555 2.84 LINK OD2 ASP D 10 CA CA D 301 1555 1555 2.46 LINK OD2 ASP D 10 MN MN D 302 1555 1555 2.30 LINK O TYR D 12 CA CA D 301 1555 1555 2.56 LINK OD1 ASN D 14 CA CA D 301 1555 1555 2.37 LINK OD2 ASP D 19 CA CA D 301 1555 1555 2.58 LINK OD1 ASP D 19 MN MN D 302 1555 1555 2.25 LINK NE2 HIS D 24 MN MN D 302 1555 1555 2.16 LINK CA CA D 301 O HOH D 447 1555 1555 1.99 LINK CA CA D 301 O HOH D 448 1555 1555 2.22 LINK MN MN D 302 O HOH D 423 1555 1555 2.19 LINK MN MN D 302 O HOH D 443 1555 1555 2.10 CISPEP 1 ASN A 118 SER A 119 0 -19.84 CISPEP 2 ALA A 207 ASP A 208 0 -3.38 CISPEP 3 ALA D 207 ASP D 208 0 -1.05 SITE 1 AC1 6 ASP A 10 TYR A 12 ASN A 14 ASP A 19 SITE 2 AC1 6 HOH A 444 HOH A 446 SITE 1 AC2 6 GLU A 8 ASP A 10 ASP A 19 HIS A 24 SITE 2 AC2 6 HOH A 422 HOH A 441 SITE 1 AC3 7 TYR A 12 ASN A 14 GLY A 98 LEU A 99 SITE 2 AC3 7 TYR A 100 ALA A 207 ASP A 208 SITE 1 AC4 9 SER A 113 LEU A 115 ASN A 124 ALA A 125 SITE 2 AC4 9 LEU A 126 VAL A 179 HIS A 180 HOH A 418 SITE 3 AC4 9 ASP D 139 SITE 1 AC5 3 ASN A 124 GLU A 183 GLN D 132 SITE 1 AC6 2 THR A 49 HOH A 409 SITE 1 AC7 6 ASP D 10 TYR D 12 ASN D 14 ASP D 19 SITE 2 AC7 6 HOH D 447 HOH D 448 SITE 1 AC8 6 GLU D 8 ASP D 10 ASP D 19 HIS D 24 SITE 2 AC8 6 HOH D 423 HOH D 443 SITE 1 AC9 7 TYR D 12 ASN D 14 GLY D 98 LEU D 99 SITE 2 AC9 7 TYR D 100 ALA D 207 ASP D 208 SITE 1 AD1 5 TYR A 100 GLN A 132 PHE A 133 ASN D 124 SITE 2 AD1 5 GLU D 183 SITE 1 AD2 3 GLY D 18 SER D 161 EDO D 306 SITE 1 AD3 3 LYS D 36 THR D 37 EDO D 305 SITE 1 AD4 3 LYS D 46 VAL D 47 PRO D 68 SITE 1 AD5 5 LEU D 107 ASN D 131 GLN D 132 GLY D 152 SITE 2 AD5 5 ASN D 153 CRYST1 120.410 72.130 68.390 90.00 124.47 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008305 0.000000 0.005701 0.00000 SCALE2 0.000000 0.013864 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017736 0.00000