data_4PDJ # _entry.id 4PDJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PDJ pdb_00004pdj 10.2210/pdb4pdj/pdb WWPDB D_1000201185 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-04-15 2 'Structure model' 1 1 2016-07-20 3 'Structure model' 1 2 2017-09-20 4 'Structure model' 1 3 2019-12-04 5 'Structure model' 1 4 2023-12-27 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Derived calculations' 4 3 'Structure model' 'Source and taxonomy' 5 4 'Structure model' 'Author supporting evidence' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 3 'Structure model' pdbx_audit_support 3 3 'Structure model' pdbx_struct_oper_list 4 4 'Structure model' pdbx_audit_support 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_struct_conn_angle 9 5 'Structure model' struct_conn 10 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity_src_gen.pdbx_gene_src_scientific_name' 2 3 'Structure model' '_pdbx_audit_support.funding_organization' 3 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 4 'Structure model' '_pdbx_audit_support.funding_organization' 5 5 'Structure model' '_database_2.pdbx_DOI' 6 5 'Structure model' '_database_2.pdbx_database_accession' 7 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 5 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 5 'Structure model' '_pdbx_struct_conn_angle.ptnr2_symmetry' 14 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 15 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 16 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 17 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 18 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 19 5 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 20 5 'Structure model' '_pdbx_struct_conn_angle.value' 21 5 'Structure model' '_struct_conn.pdbx_dist_value' 22 5 'Structure model' '_struct_conn.pdbx_ptnr1_label_alt_id' 23 5 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 24 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 25 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 26 5 'Structure model' '_struct_conn.ptnr1_label_atom_id' 27 5 'Structure model' '_struct_conn.ptnr1_label_comp_id' 28 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 29 5 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 5 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 5 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 5 'Structure model' '_struct_conn.ptnr2_symmetry' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4PDJ _pdbx_database_status.recvd_initial_deposition_date 2014-04-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wan, Q.' 1 'Kovalevsky, A.Y.' 2 'Wilson, M.' 3 'Langan, P.' 4 'Dealwis, C.' 5 'Bennett, B.' 6 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_id_ASTM PNASA6 _citation.journal_id_CSD 0040 _citation.journal_id_ISSN 1091-6490 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 111 _citation.language ? _citation.page_first 18225 _citation.page_last 18230 _citation.title 'Toward resolving the catalytic mechanism of dihydrofolate reductase using neutron and ultrahigh-resolution X-ray crystallography.' _citation.year 2014 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1073/pnas.1415856111 _citation.pdbx_database_id_PubMed 25453083 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wan, Q.' 1 ? primary 'Bennett, B.C.' 2 ? primary 'Wilson, M.A.' 3 ? primary 'Kovalevsky, A.' 4 ? primary 'Langan, P.' 5 ? primary 'Howell, E.E.' 6 ? primary 'Dealwis, C.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dihydrofolate reductase' 18019.340 1 1.5.1.3 ? ? ? 2 non-polymer syn 'MANGANESE (II) ION' 54.938 2 ? ? ? ? 3 non-polymer syn 'DIHYDROFOLIC ACID' 443.413 1 ? ? ? ? 4 non-polymer syn 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' 745.421 1 ? ? ? ? 5 water nat water 18.015 119 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDE AIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR ; _entity_poly.pdbx_seq_one_letter_code_can ;MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDE AIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MANGANESE (II) ION' MN 3 'DIHYDROFOLIC ACID' DHF 4 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' NDP 5 water DOD # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ILE n 1 3 SER n 1 4 LEU n 1 5 ILE n 1 6 ALA n 1 7 ALA n 1 8 LEU n 1 9 ALA n 1 10 VAL n 1 11 ASP n 1 12 ARG n 1 13 VAL n 1 14 ILE n 1 15 GLY n 1 16 MET n 1 17 GLU n 1 18 ASN n 1 19 ALA n 1 20 MET n 1 21 PRO n 1 22 TRP n 1 23 ASN n 1 24 LEU n 1 25 PRO n 1 26 ALA n 1 27 ASP n 1 28 LEU n 1 29 ALA n 1 30 TRP n 1 31 PHE n 1 32 LYS n 1 33 ARG n 1 34 ASN n 1 35 THR n 1 36 LEU n 1 37 ASN n 1 38 LYS n 1 39 PRO n 1 40 VAL n 1 41 ILE n 1 42 MET n 1 43 GLY n 1 44 ARG n 1 45 HIS n 1 46 THR n 1 47 TRP n 1 48 GLU n 1 49 SER n 1 50 ILE n 1 51 GLY n 1 52 ARG n 1 53 PRO n 1 54 LEU n 1 55 PRO n 1 56 GLY n 1 57 ARG n 1 58 LYS n 1 59 ASN n 1 60 ILE n 1 61 ILE n 1 62 LEU n 1 63 SER n 1 64 SER n 1 65 GLN n 1 66 PRO n 1 67 GLY n 1 68 THR n 1 69 ASP n 1 70 ASP n 1 71 ARG n 1 72 VAL n 1 73 THR n 1 74 TRP n 1 75 VAL n 1 76 LYS n 1 77 SER n 1 78 VAL n 1 79 ASP n 1 80 GLU n 1 81 ALA n 1 82 ILE n 1 83 ALA n 1 84 ALA n 1 85 CYS n 1 86 GLY n 1 87 ASP n 1 88 VAL n 1 89 PRO n 1 90 GLU n 1 91 ILE n 1 92 MET n 1 93 VAL n 1 94 ILE n 1 95 GLY n 1 96 GLY n 1 97 GLY n 1 98 ARG n 1 99 VAL n 1 100 TYR n 1 101 GLU n 1 102 GLN n 1 103 PHE n 1 104 LEU n 1 105 PRO n 1 106 LYS n 1 107 ALA n 1 108 GLN n 1 109 LYS n 1 110 LEU n 1 111 TYR n 1 112 LEU n 1 113 THR n 1 114 HIS n 1 115 ILE n 1 116 ASP n 1 117 ALA n 1 118 GLU n 1 119 VAL n 1 120 GLU n 1 121 GLY n 1 122 ASP n 1 123 THR n 1 124 HIS n 1 125 PHE n 1 126 PRO n 1 127 ASP n 1 128 TYR n 1 129 GLU n 1 130 PRO n 1 131 ASP n 1 132 ASP n 1 133 TRP n 1 134 GLU n 1 135 SER n 1 136 VAL n 1 137 PHE n 1 138 SER n 1 139 GLU n 1 140 PHE n 1 141 HIS n 1 142 ASP n 1 143 ALA n 1 144 ASP n 1 145 ALA n 1 146 GLN n 1 147 ASN n 1 148 SER n 1 149 HIS n 1 150 SER n 1 151 TYR n 1 152 CYS n 1 153 PHE n 1 154 GLU n 1 155 ILE n 1 156 LEU n 1 157 GLU n 1 158 ARG n 1 159 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 159 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'folA, tmrA, b0048, JW0047' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-sumo _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DHF non-polymer . 'DIHYDROFOLIC ACID' ? 'C19 H21 N7 O6' 443.413 DOD non-polymer . 'DEUTERATED WATER' ? 'D2 O' 20.028 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 NDP non-polymer . 'NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE' ? 'C21 H30 N7 O17 P3' 745.421 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 SER 3 3 3 SER SER A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 ALA 6 6 6 ALA ALA A . n A 1 7 ALA 7 7 7 ALA ALA A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 ALA 9 9 9 ALA ALA A . n A 1 10 VAL 10 10 10 VAL VAL A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 ARG 12 12 12 ARG ARG A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 ILE 14 14 14 ILE ILE A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 MET 16 16 16 MET MET A . n A 1 17 GLU 17 17 17 GLU GLU A . n A 1 18 ASN 18 18 18 ASN ASN A . n A 1 19 ALA 19 19 19 ALA ALA A . n A 1 20 MET 20 20 20 MET MET A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 TRP 22 22 22 TRP TRP A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 LEU 24 24 24 LEU LEU A . n A 1 25 PRO 25 25 25 PRO PRO A . n A 1 26 ALA 26 26 26 ALA ALA A . n A 1 27 ASP 27 27 27 ASP ASP A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 ALA 29 29 29 ALA ALA A . n A 1 30 TRP 30 30 30 TRP TRP A . n A 1 31 PHE 31 31 31 PHE PHE A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 ARG 33 33 33 ARG ARG A . n A 1 34 ASN 34 34 34 ASN ASN A . n A 1 35 THR 35 35 35 THR THR A . n A 1 36 LEU 36 36 36 LEU LEU A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 VAL 40 40 40 VAL VAL A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 MET 42 42 42 MET MET A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 ARG 44 44 44 ARG ARG A . n A 1 45 HIS 45 45 45 HIS HIS A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 TRP 47 47 47 TRP TRP A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 SER 49 49 49 SER SER A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 PRO 53 53 53 PRO PRO A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 PRO 55 55 55 PRO PRO A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 ASN 59 59 59 ASN ASN A . n A 1 60 ILE 60 60 60 ILE ILE A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 SER 63 63 63 SER SER A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 GLN 65 65 65 GLN GLN A . n A 1 66 PRO 66 66 66 PRO PRO A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 THR 68 68 68 THR THR A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 ASP 70 70 70 ASP ASP A . n A 1 71 ARG 71 71 71 ARG ARG A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 THR 73 73 73 THR THR A . n A 1 74 TRP 74 74 74 TRP TRP A . n A 1 75 VAL 75 75 75 VAL VAL A . n A 1 76 LYS 76 76 76 LYS LYS A . n A 1 77 SER 77 77 77 SER SER A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 ASP 79 79 79 ASP ASP A . n A 1 80 GLU 80 80 80 GLU GLU A . n A 1 81 ALA 81 81 81 ALA ALA A . n A 1 82 ILE 82 82 82 ILE ILE A . n A 1 83 ALA 83 83 83 ALA ALA A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 CYS 85 85 85 CYS CYS A . n A 1 86 GLY 86 86 86 GLY GLY A . n A 1 87 ASP 87 87 87 ASP ASP A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 PRO 89 89 89 PRO PRO A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 ILE 91 91 91 ILE ILE A . n A 1 92 MET 92 92 92 MET MET A . n A 1 93 VAL 93 93 93 VAL VAL A . n A 1 94 ILE 94 94 94 ILE ILE A . n A 1 95 GLY 95 95 95 GLY GLY A . n A 1 96 GLY 96 96 96 GLY GLY A . n A 1 97 GLY 97 97 97 GLY GLY A . n A 1 98 ARG 98 98 98 ARG ARG A . n A 1 99 VAL 99 99 99 VAL VAL A . n A 1 100 TYR 100 100 100 TYR TYR A . n A 1 101 GLU 101 101 101 GLU GLU A . n A 1 102 GLN 102 102 102 GLN GLN A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 LEU 104 104 104 LEU LEU A . n A 1 105 PRO 105 105 105 PRO PRO A . n A 1 106 LYS 106 106 106 LYS LYS A . n A 1 107 ALA 107 107 107 ALA ALA A . n A 1 108 GLN 108 108 108 GLN GLN A . n A 1 109 LYS 109 109 109 LYS LYS A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 TYR 111 111 111 TYR TYR A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 THR 113 113 113 THR THR A . n A 1 114 HIS 114 114 114 HIS HIS A . n A 1 115 ILE 115 115 115 ILE ILE A . n A 1 116 ASP 116 116 116 ASP ASP A . n A 1 117 ALA 117 117 117 ALA ALA A . n A 1 118 GLU 118 118 118 GLU GLU A . n A 1 119 VAL 119 119 119 VAL VAL A . n A 1 120 GLU 120 120 120 GLU GLU A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 ASP 122 122 122 ASP ASP A . n A 1 123 THR 123 123 123 THR THR A . n A 1 124 HIS 124 124 124 HIS HIS A . n A 1 125 PHE 125 125 125 PHE PHE A . n A 1 126 PRO 126 126 126 PRO PRO A . n A 1 127 ASP 127 127 127 ASP ASP A . n A 1 128 TYR 128 128 128 TYR TYR A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 PRO 130 130 130 PRO PRO A . n A 1 131 ASP 131 131 131 ASP ASP A . n A 1 132 ASP 132 132 132 ASP ASP A . n A 1 133 TRP 133 133 133 TRP TRP A . n A 1 134 GLU 134 134 134 GLU GLU A . n A 1 135 SER 135 135 135 SER SER A . n A 1 136 VAL 136 136 136 VAL VAL A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 SER 138 138 138 SER SER A . n A 1 139 GLU 139 139 139 GLU GLU A . n A 1 140 PHE 140 140 140 PHE PHE A . n A 1 141 HIS 141 141 141 HIS HIS A . n A 1 142 ASP 142 142 142 ASP ASP A . n A 1 143 ALA 143 143 143 ALA ALA A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 ALA 145 145 145 ALA ALA A . n A 1 146 GLN 146 146 146 GLN GLN A . n A 1 147 ASN 147 147 147 ASN ASN A . n A 1 148 SER 148 148 148 SER SER A . n A 1 149 HIS 149 149 149 HIS HIS A . n A 1 150 SER 150 150 150 SER SER A . n A 1 151 TYR 151 151 151 TYR TYR A . n A 1 152 CYS 152 152 152 CYS CYS A . n A 1 153 PHE 153 153 153 PHE PHE A . n A 1 154 GLU 154 154 154 GLU GLU A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLU 157 157 157 GLU GLU A . n A 1 158 ARG 158 158 158 ARG ARG A . n A 1 159 ARG 159 159 159 ARG ARG A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MN 1 201 200 MN MN A . C 2 MN 1 202 300 MN MN A . D 3 DHF 1 203 161 DHF FO9 A . E 4 NDP 1 204 164 NDP NAP A . F 5 DOD 1 301 76 DOD DOD A . F 5 DOD 2 302 114 DOD DOD A . F 5 DOD 3 303 82 DOD DOD A . F 5 DOD 4 304 93 DOD DOD A . F 5 DOD 5 305 129 DOD DOD A . F 5 DOD 6 306 49 DOD DOD A . F 5 DOD 7 307 5 DOD DOD A . F 5 DOD 8 308 97 DOD DOD A . F 5 DOD 9 309 9 DOD DOD A . F 5 DOD 10 310 12 DOD DOD A . F 5 DOD 11 311 38 DOD DOD A . F 5 DOD 12 312 62 DOD DOD A . F 5 DOD 13 313 39 DOD DOD A . F 5 DOD 14 314 59 DOD DOD A . F 5 DOD 15 315 79 DOD DOD A . F 5 DOD 16 316 115 DOD DOD A . F 5 DOD 17 317 119 DOD DOD A . F 5 DOD 18 318 111 DOD DOD A . F 5 DOD 19 319 17 DOD DOD A . F 5 DOD 20 320 64 DOD DOD A . F 5 DOD 21 321 8 DOD DOD A . F 5 DOD 22 322 81 DOD DOD A . F 5 DOD 23 323 116 DOD DOD A . F 5 DOD 24 324 22 DOD DOD A . F 5 DOD 25 325 40 DOD DOD A . F 5 DOD 26 326 99 DOD DOD A . F 5 DOD 27 327 69 DOD DOD A . F 5 DOD 28 328 106 DOD DOD A . F 5 DOD 29 329 16 DOD DOD A . F 5 DOD 30 330 4 DOD DOD A . F 5 DOD 31 331 15 DOD DOD A . F 5 DOD 32 332 80 DOD DOD A . F 5 DOD 33 333 24 DOD DOD A . F 5 DOD 34 334 48 DOD DOD A . F 5 DOD 35 335 68 DOD DOD A . F 5 DOD 36 336 109 DOD DOD A . F 5 DOD 37 337 91 DOD DOD A . F 5 DOD 38 338 36 DOD DOD A . F 5 DOD 39 339 37 DOD DOD A . F 5 DOD 40 340 128 DOD DOD A . F 5 DOD 41 341 92 DOD DOD A . F 5 DOD 42 342 88 DOD DOD A . F 5 DOD 43 343 75 DOD DOD A . F 5 DOD 44 344 27 DOD DOD A . F 5 DOD 45 345 108 DOD DOD A . F 5 DOD 46 346 83 DOD DOD A . F 5 DOD 47 347 14 DOD DOD A . F 5 DOD 48 348 105 DOD DOD A . F 5 DOD 49 349 96 DOD DOD A . F 5 DOD 50 350 112 DOD DOD A . F 5 DOD 51 351 90 DOD DOD A . F 5 DOD 52 352 58 DOD DOD A . F 5 DOD 53 353 63 DOD DOD A . F 5 DOD 54 354 71 DOD DOD A . F 5 DOD 55 355 23 DOD DOD A . F 5 DOD 56 356 56 DOD DOD A . F 5 DOD 57 357 102 DOD DOD A . F 5 DOD 58 358 86 DOD DOD A . F 5 DOD 59 359 125 DOD DOD A . F 5 DOD 60 360 103 DOD DOD A . F 5 DOD 61 361 101 DOD DOD A . F 5 DOD 62 362 124 DOD DOD A . F 5 DOD 63 363 127 DOD DOD A . F 5 DOD 64 364 113 DOD DOD A . F 5 DOD 65 365 2 DOD DOD A . F 5 DOD 66 366 6 DOD DOD A . F 5 DOD 67 367 7 DOD DOD A . F 5 DOD 68 368 10 DOD DOD A . F 5 DOD 69 369 11 DOD DOD A . F 5 DOD 70 370 13 DOD DOD A . F 5 DOD 71 371 18 DOD DOD A . F 5 DOD 72 372 20 DOD DOD A . F 5 DOD 73 373 21 DOD DOD A . F 5 DOD 74 374 25 DOD DOD A . F 5 DOD 75 375 26 DOD DOD A . F 5 DOD 76 376 28 DOD DOD A . F 5 DOD 77 377 29 DOD DOD A . F 5 DOD 78 378 30 DOD DOD A . F 5 DOD 79 379 31 DOD DOD A . F 5 DOD 80 380 32 DOD DOD A . F 5 DOD 81 381 33 DOD DOD A . F 5 DOD 82 382 34 DOD DOD A . F 5 DOD 83 383 35 DOD DOD A . F 5 DOD 84 384 41 DOD DOD A . F 5 DOD 85 385 42 DOD DOD A . F 5 DOD 86 386 43 DOD DOD A . F 5 DOD 87 387 44 DOD DOD A . F 5 DOD 88 388 45 DOD DOD A . F 5 DOD 89 389 46 DOD DOD A . F 5 DOD 90 390 47 DOD DOD A . F 5 DOD 91 391 50 DOD DOD A . F 5 DOD 92 392 51 DOD DOD A . F 5 DOD 93 393 52 DOD DOD A . F 5 DOD 94 394 54 DOD DOD A . F 5 DOD 95 395 55 DOD DOD A . F 5 DOD 96 396 60 DOD DOD A . F 5 DOD 97 397 61 DOD DOD A . F 5 DOD 98 398 65 DOD DOD A . F 5 DOD 99 399 66 DOD DOD A . F 5 DOD 100 400 67 DOD DOD A . F 5 DOD 101 401 70 DOD DOD A . F 5 DOD 102 402 72 DOD DOD A . F 5 DOD 103 403 73 DOD DOD A . F 5 DOD 104 404 74 DOD DOD A . F 5 DOD 105 405 77 DOD DOD A . F 5 DOD 106 406 78 DOD DOD A . F 5 DOD 107 407 84 DOD DOD A . F 5 DOD 108 408 85 DOD DOD A . F 5 DOD 109 409 87 DOD DOD A . F 5 DOD 110 410 89 DOD DOD A . F 5 DOD 111 411 94 DOD DOD A . F 5 DOD 112 412 95 DOD DOD A . F 5 DOD 113 413 98 DOD DOD A . F 5 DOD 114 414 104 DOD DOD A . F 5 DOD 115 415 110 DOD DOD A . F 5 DOD 116 416 117 DOD DOD A . F 5 DOD 117 417 118 DOD DOD A . F 5 DOD 118 418 120 DOD DOD A . F 5 DOD 119 419 122 DOD DOD A . # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? '(phenix.refine: dev_1358)' 1 ? 'data processing' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.14 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? Coot ? ? ? . 5 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 6 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 7 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? SCALA ? ? ? . 8 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? LAUEGEN ? ? ? . 9 # _cell.entry_id 4PDJ _cell.length_a 34.293 _cell.length_b 45.625 _cell.length_c 98.974 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PDJ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _exptl.absorpt_coefficient_mu _exptl.absorpt_correction_T_max _exptl.absorpt_correction_T_min _exptl.absorpt_correction_type _exptl.absorpt_process_details _exptl.entry_id _exptl.crystals_number _exptl.details _exptl.method _exptl.method_details ? ? ? ? ? 4PDJ 1 ? 'X-RAY DIFFRACTION' ? ? ? ? ? ? 4PDJ 2 ? 'NEUTRON DIFFRACTION' ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.15 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 42.75 _exptl_crystal.description 'rectangular 3.6 mm3 size crystal' _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details 'room temperature' _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '40mg/mL DHFR-folate-NADP+ complex, 12% (v/v) PEG400, 100 mM MnCl2, 20 mM imidazole, pH7.0' _exptl_crystal_grow.pdbx_pH_range ? # loop_ _diffrn.ambient_environment _diffrn.ambient_temp _diffrn.ambient_temp_details _diffrn.ambient_temp_esd _diffrn.crystal_id _diffrn.crystal_support _diffrn.crystal_treatment _diffrn.details _diffrn.id _diffrn.ambient_pressure _diffrn.ambient_pressure_esd _diffrn.ambient_pressure_gt _diffrn.ambient_pressure_lt _diffrn.ambient_temp_gt _diffrn.ambient_temp_lt ? 291 'in capillary' ? 1 ? ? ? 1 ? ? ? ? ? ? ? 291 'in capillary' ? 1 ? ? ? 2 ? ? ? ? ? ? # loop_ _diffrn_detector.details _diffrn_detector.detector _diffrn_detector.diffrn_id _diffrn_detector.type _diffrn_detector.area_resol_mean _diffrn_detector.dtime _diffrn_detector.pdbx_frames_total _diffrn_detector.pdbx_collection_time_total _diffrn_detector.pdbx_collection_date mirrors 'IMAGE PLATE' 1 RIGAKU ? ? ? ? 2013-09-10 mirrors ? 2 CUSTOM-MADE ? ? ? ? 2013-08-10 # loop_ _diffrn_radiation.collimation _diffrn_radiation.diffrn_id _diffrn_radiation.filter_edge _diffrn_radiation.inhomogeneity _diffrn_radiation.monochromator _diffrn_radiation.polarisn_norm _diffrn_radiation.polarisn_ratio _diffrn_radiation.probe _diffrn_radiation.type _diffrn_radiation.xray_symbol _diffrn_radiation.wavelength_id _diffrn_radiation.pdbx_monochromatic_or_laue_m_l _diffrn_radiation.pdbx_wavelength_list _diffrn_radiation.pdbx_wavelength _diffrn_radiation.pdbx_diffrn_protocol _diffrn_radiation.pdbx_analyzer _diffrn_radiation.pdbx_scattering_type ? 1 ? ? 'Multilayer mirror' ? ? ? ? ? 1 M ? ? 'SINGLE WAVELENGTH' ? x-ray ? 2 ? ? CHOPPER ? ? ? ? ? 2 L ? ? LAUE ? neutron # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 1.54 1.0 2 3.3 1.0 3 4.5 1.0 # loop_ _diffrn_source.current _diffrn_source.details _diffrn_source.diffrn_id _diffrn_source.power _diffrn_source.size _diffrn_source.source _diffrn_source.target _diffrn_source.type _diffrn_source.voltage _diffrn_source.take-off_angle _diffrn_source.pdbx_wavelength_list _diffrn_source.pdbx_wavelength _diffrn_source.pdbx_synchrotron_beamline _diffrn_source.pdbx_synchrotron_site ? ? 1 ? ? 'ROTATING ANODE' ? RIGAKU ? ? 1.54 ? ? ? ? ? 2 ? ? 'NUCLEAR REACTOR' ? OTHER ? ? 3.3 3.3-4.5 ? ? # loop_ _reflns.B_iso_Wilson_estimate _reflns.entry_id _reflns.data_reduction_details _reflns.data_reduction_method _reflns.d_resolution_high _reflns.d_resolution_low _reflns.details _reflns.limit_h_max _reflns.limit_h_min _reflns.limit_k_max _reflns.limit_k_min _reflns.limit_l_max _reflns.limit_l_min _reflns.number_all _reflns.number_obs _reflns.observed_criterion _reflns.observed_criterion_F_max _reflns.observed_criterion_F_min _reflns.observed_criterion_I_max _reflns.observed_criterion_I_min _reflns.observed_criterion_sigma_F _reflns.observed_criterion_sigma_I _reflns.percent_possible_obs _reflns.R_free_details _reflns.Rmerge_F_all _reflns.Rmerge_F_obs _reflns.Friedel_coverage _reflns.number_gt _reflns.threshold_expression _reflns.pdbx_redundancy _reflns.pdbx_Rmerge_I_obs _reflns.pdbx_Rmerge_I_all _reflns.pdbx_Rsym_value _reflns.pdbx_netI_over_av_sigmaI _reflns.pdbx_netI_over_sigmaI _reflns.pdbx_res_netI_over_av_sigmaI_2 _reflns.pdbx_res_netI_over_sigmaI_2 _reflns.pdbx_chi_squared _reflns.pdbx_scaling_rejects _reflns.pdbx_d_res_high_opt _reflns.pdbx_d_res_low_opt _reflns.pdbx_d_res_opt_method _reflns.phase_calculation_details _reflns.pdbx_Rrim_I_all _reflns.pdbx_Rpim_I_all _reflns.pdbx_d_opt _reflns.pdbx_number_measured_all _reflns.pdbx_diffrn_id _reflns.pdbx_ordinal _reflns.pdbx_CC_half _reflns.pdbx_R_split ? 4PDJ ? ? 1.599 30.0 ? ? ? ? ? ? ? ? 20751 ? ? ? ? ? ? 3.2 79.3 ? ? ? ? ? ? 7.5 ? ? 0.188 ? 5.3 ? ? ? ? ? ? ? ? ? ? ? ? 1 1 ? ? ? 4PDJ ? ? 1.994 32.4 ? ? ? ? ? ? ? ? 8745 ? ? ? ? ? ? ? 70.0 ? ? ? ? ? ? 1.2 ? ? ? ? 1.2 ? ? ? ? ? ? ? ? ? ? ? ? 2 2 ? ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.meanI_over_sigI_all _reflns_shell.meanI_over_sigI_obs _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.number_unique_obs _reflns_shell.percent_possible_all _reflns_shell.percent_possible_obs _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_gt _reflns_shell.meanI_over_uI_all _reflns_shell.meanI_over_uI_gt _reflns_shell.number_measured_gt _reflns_shell.number_unique_gt _reflns_shell.percent_possible_gt _reflns_shell.Rmerge_F_gt _reflns_shell.Rmerge_I_gt _reflns_shell.pdbx_redundancy _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_netI_over_sigmaI_all _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_rejects _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id _reflns_shell.pdbx_CC_half _reflns_shell.pdbx_R_split 1.599 1.7 ? 3.2 ? ? ? ? ? 61.3 ? ? ? ? 0.31 ? ? ? ? ? ? ? ? 5.8 ? ? ? ? ? ? ? 1 1 ? ? 1.994 2.1 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 2 ? ? # loop_ _refine.pdbx_refine_id _refine.entry_id _refine.pdbx_diffrn_id _refine.pdbx_TLS_residual_ADP_flag _refine.ls_number_reflns_obs _refine.ls_number_reflns_all _refine.pdbx_ls_sigma_I _refine.pdbx_ls_sigma_F _refine.pdbx_data_cutoff_high_absF _refine.pdbx_data_cutoff_low_absF _refine.pdbx_data_cutoff_high_rms_absF _refine.ls_d_res_low _refine.ls_d_res_high _refine.ls_percent_reflns_obs _refine.ls_R_factor_obs _refine.ls_R_factor_all _refine.ls_R_factor_R_work _refine.ls_R_factor_R_free _refine.ls_R_factor_R_free_error _refine.ls_R_factor_R_free_error_details _refine.ls_percent_reflns_R_free _refine.ls_number_reflns_R_free _refine.ls_number_parameters _refine.ls_number_restraints _refine.occupancy_min _refine.occupancy_max _refine.correlation_coeff_Fo_to_Fc _refine.correlation_coeff_Fo_to_Fc_free _refine.B_iso_mean _refine.aniso_B[1][1] _refine.aniso_B[2][2] _refine.aniso_B[3][3] _refine.aniso_B[1][2] _refine.aniso_B[1][3] _refine.aniso_B[2][3] _refine.solvent_model_details _refine.solvent_model_param_ksol _refine.solvent_model_param_bsol _refine.pdbx_solvent_vdw_probe_radii _refine.pdbx_solvent_ion_probe_radii _refine.pdbx_solvent_shrinkage_radii _refine.pdbx_ls_cross_valid_method _refine.details _refine.pdbx_starting_model _refine.pdbx_method_to_determine_struct _refine.pdbx_isotropic_thermal_model _refine.pdbx_stereochemistry_target_values _refine.pdbx_stereochem_target_val_spec_case _refine.pdbx_R_Free_selection_details _refine.pdbx_overall_ESU_R _refine.pdbx_overall_ESU_R_Free _refine.overall_SU_ML _refine.pdbx_overall_phase_error _refine.overall_SU_B _refine.overall_SU_R_Cruickshank_DPI _refine.pdbx_overall_SU_R_free_Cruickshank_DPI _refine.pdbx_overall_SU_R_Blow_DPI _refine.pdbx_overall_SU_R_free_Blow_DPI 'X-RAY DIFFRACTION' 4PDJ 1 ? 20751 ? ? ? ? ? ? 27.413 1.599 97.58 0.1948 ? 0.1937 0.2180 ? ? 5.15 1068 ? ? ? ? ? ? ? ? ? ? ? ? ? 'FLAT BULK SOLVENT MODEL' ? ? 1.11 ? 0.90 'FREE R-VALUE' ? 1RX2 'MOLECULAR REPLACEMENT' ? ML ? ? ? ? 0.18 22.64 ? ? ? ? ? 'NEUTRON DIFFRACTION' 4PDJ 2 ? 8743 ? ? ? ? ? ? 32.403 1.994 78.42 0.2322 ? 0.2303 0.2707 ? ? 4.88 427 ? ? ? ? ? ? ? ? ? ? ? ? ? 'FLAT BULK SOLVENT MODEL' ? ? 1.11 ? 0.90 'FREE R-VALUE' ? 1RX2 'MOLECULAR REPLACEMENT' ? ML ? ? ? ? 0.27 25.03 ? ? ? ? ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1268 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 82 _refine_hist.number_atoms_solvent 119 _refine_hist.number_atoms_total 1469 _refine_hist.d_res_high 1.599 _refine_hist.d_res_low 27.413 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.092 ? ? 3166 'NEUTRON DIFFRACTION' ? f_angle_d 0.915 ? ? 5398 'NEUTRON DIFFRACTION' ? f_dihedral_angle_d 19.963 ? ? 818 'NEUTRON DIFFRACTION' ? f_chiral_restr 0.039 ? ? 198 'NEUTRON DIFFRACTION' ? f_plane_restr 0.028 ? ? 601 'NEUTRON DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' 8 1.5991 1.6719 2316 0.2533 94.00 0.2863 . . 142 . . . . 'X-RAY DIFFRACTION' 8 1.6719 1.7600 2374 0.2464 96.00 0.3217 . . 126 . . . . 'X-RAY DIFFRACTION' 8 1.7600 1.8703 2392 0.2316 97.00 0.2501 . . 139 . . . . 'X-RAY DIFFRACTION' 8 1.8703 2.0147 2410 0.2139 97.00 0.2654 . . 146 . . . . 'X-RAY DIFFRACTION' 8 2.0147 2.2173 2444 0.2092 98.00 0.2524 . . 135 . . . . 'X-RAY DIFFRACTION' 8 2.2173 2.5380 2508 0.2039 99.00 0.2323 . . 119 . . . . 'X-RAY DIFFRACTION' 8 2.5380 3.1968 2538 0.1992 100.00 0.2094 . . 139 . . . . 'X-RAY DIFFRACTION' 8 3.1968 27.4170 2701 0.1591 100.00 0.1600 . . 122 . . . . 'NEUTRON DIFFRACTION' 3 1.9937 2.2821 2226 0.2966 64.00 0.3341 . . 115 . . . . 'NEUTRON DIFFRACTION' 3 2.2821 2.8750 2700 0.2503 78.00 0.2873 . . 152 . . . . 'NEUTRON DIFFRACTION' 3 2.8750 32.4074 3390 0.1925 93.00 0.2327 . . 160 . . . . # _struct.entry_id 4PDJ _struct.title 'Neutron crystal Structure of E.coli Dihydrofolate Reductase complexed with folate and NADP+' _struct.pdbx_model_details 'neutron diffraction' _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4PDJ _struct_keywords.text 'alpha beta alpha sandwich, OXIDOREDUCTASE' _struct_keywords.pdbx_keywords OXIDOREDUCTASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DYR_ECOLI _struct_ref.pdbx_db_accession P0ABQ4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MISLIAALAVDRVIGMENAMPWNLPADLAWFKRNTLNKPVIMGRHTWESIGRPLPGRKNIILSSQPGTDDRVTWVKSVDE AIAACGDVPEIMVIGGGRVYEQFLPKAQKLYLTHIDAEVEGDTHFPDYEPDDWESVFSEFHDADAQNSHSYCFEILERR ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4PDJ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 159 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P0ABQ4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 159 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 159 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14400 ? 1 MORE 10 ? 1 'SSA (A^2)' 9220 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.details 'biological unit is the same as asym.' _struct_biol.id 1 _struct_biol.pdbx_parent_biol_id ? _struct_biol.pdbx_formula_weight ? _struct_biol.pdbx_formula_weight_method ? _struct_biol.pdbx_aggregation_state ? _struct_biol.pdbx_assembly_method ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 ALA A 9 ? ASP A 11 ? ALA A 9 ASP A 11 5 ? 3 HELX_P HELX_P2 AA2 LEU A 24 ? LEU A 36 ? LEU A 24 LEU A 36 1 ? 13 HELX_P HELX_P3 AA3 ARG A 44 ? GLY A 51 ? ARG A 44 GLY A 51 1 ? 8 HELX_P HELX_P4 AA4 SER A 77 ? GLY A 86 ? SER A 77 GLY A 86 1 ? 10 HELX_P HELX_P5 AA5 GLY A 96 ? LEU A 104 ? GLY A 96 LEU A 104 1 ? 9 HELX_P HELX_P6 AA6 PRO A 105 ? ALA A 107 ? PRO A 105 ALA A 107 5 ? 3 HELX_P HELX_P7 AA7 GLU A 129 ? ASP A 131 ? GLU A 129 ASP A 131 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 70 OD2 ? ? ? 1_555 C MN . MN ? ? A ASP 70 A MN 202 4_575 ? ? ? ? ? ? ? 2.284 ? ? metalc2 metalc ? ? A ASP 87 OD1 ? ? ? 1_555 C MN . MN ? ? A ASP 87 A MN 202 1_555 ? ? ? ? ? ? ? 2.248 ? ? metalc3 metalc ? ? A ASP 116 O A ? ? 1_555 B MN . MN ? ? A ASP 116 A MN 201 1_555 ? ? ? ? ? ? ? 2.227 ? ? metalc4 metalc ? ? A HIS 149 ND1 ? ? ? 1_555 B MN . MN ? ? A HIS 149 A MN 201 1_555 ? ? ? ? ? ? ? 2.290 ? ? metalc5 metalc ? ? A ARG 159 O ? ? ? 1_555 B MN . MN ? ? A ARG 159 A MN 201 1_455 ? ? ? ? ? ? ? 2.355 ? ? metalc6 metalc ? ? B MN . MN ? ? ? 1_555 F DOD . O ? ? A MN 201 A DOD 330 1_555 ? ? ? ? ? ? ? 2.104 ? ? metalc7 metalc ? ? B MN . MN ? ? ? 1_555 F DOD . O ? ? A MN 201 A DOD 338 1_655 ? ? ? ? ? ? ? 1.961 ? ? metalc8 metalc ? ? C MN . MN ? ? ? 1_555 F DOD . O ? ? A MN 202 A DOD 342 1_555 ? ? ? ? ? ? ? 2.235 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 70 ? A ASP 70 ? 1_555 MN ? C MN . ? A MN 202 ? 4_575 OD1 ? A ASP 87 ? A ASP 87 ? 1_555 100.8 ? 2 OD2 ? A ASP 70 ? A ASP 70 ? 1_555 MN ? C MN . ? A MN 202 ? 4_575 O ? F DOD . ? A DOD 342 ? 1_555 99.1 ? 3 OD1 ? A ASP 87 ? A ASP 87 ? 1_555 MN ? C MN . ? A MN 202 ? 4_575 O ? F DOD . ? A DOD 342 ? 1_555 6.9 ? 4 O A A ASP 116 ? A ASP 116 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 ND1 ? A HIS 149 ? A HIS 149 ? 1_555 88.6 ? 5 O A A ASP 116 ? A ASP 116 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? A ARG 159 ? A ARG 159 ? 1_555 14.2 ? 6 ND1 ? A HIS 149 ? A HIS 149 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? A ARG 159 ? A ARG 159 ? 1_555 88.4 ? 7 O A A ASP 116 ? A ASP 116 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F DOD . ? A DOD 330 ? 1_555 81.5 ? 8 ND1 ? A HIS 149 ? A HIS 149 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F DOD . ? A DOD 330 ? 1_555 104.1 ? 9 O ? A ARG 159 ? A ARG 159 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F DOD . ? A DOD 330 ? 1_555 67.9 ? 10 O A A ASP 116 ? A ASP 116 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F DOD . ? A DOD 338 ? 1_655 88.2 ? 11 ND1 ? A HIS 149 ? A HIS 149 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F DOD . ? A DOD 338 ? 1_655 175.5 ? 12 O ? A ARG 159 ? A ARG 159 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F DOD . ? A DOD 338 ? 1_655 89.3 ? 13 O ? F DOD . ? A DOD 330 ? 1_555 MN ? B MN . ? A MN 201 ? 1_555 O ? F DOD . ? A DOD 338 ? 1_655 78.6 ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLY _struct_mon_prot_cis.label_seq_id 95 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLY _struct_mon_prot_cis.auth_seq_id 95 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 GLY _struct_mon_prot_cis.pdbx_label_seq_id_2 96 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 GLY _struct_mon_prot_cis.pdbx_auth_seq_id_2 96 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 4.65 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 8 ? AA2 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? parallel AA1 5 6 ? parallel AA1 6 7 ? anti-parallel AA1 7 8 ? anti-parallel AA2 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 THR A 73 ? VAL A 75 ? THR A 73 VAL A 75 AA1 2 LYS A 58 ? LEU A 62 ? LYS A 58 LEU A 62 AA1 3 PRO A 39 ? GLY A 43 ? PRO A 39 GLY A 43 AA1 4 ILE A 91 ? VAL A 93 ? ILE A 91 VAL A 93 AA1 5 ILE A 2 ? LEU A 8 ? ILE A 2 LEU A 8 AA1 6 LYS A 109 ? ILE A 115 ? LYS A 109 ILE A 115 AA1 7 TYR A 151 ? ARG A 158 ? TYR A 151 ARG A 158 AA1 8 TRP A 133 ? HIS A 141 ? TRP A 133 HIS A 141 AA2 1 VAL A 13 ? GLY A 15 ? VAL A 13 GLY A 15 AA2 2 THR A 123 ? HIS A 124 ? THR A 123 HIS A 124 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O THR A 73 ? O THR A 73 N ILE A 61 ? N ILE A 61 AA1 2 3 O LEU A 62 ? O LEU A 62 N MET A 42 ? N MET A 42 AA1 3 4 N ILE A 41 ? N ILE A 41 O MET A 92 ? O MET A 92 AA1 4 5 O ILE A 91 ? O ILE A 91 N SER A 3 ? N SER A 3 AA1 5 6 N LEU A 8 ? N LEU A 8 O ILE A 115 ? O ILE A 115 AA1 6 7 N LEU A 112 ? N LEU A 112 O GLU A 154 ? O GLU A 154 AA1 7 8 O TYR A 151 ? O TYR A 151 N HIS A 141 ? N HIS A 141 AA2 1 2 N ILE A 14 ? N ILE A 14 O THR A 123 ? O THR A 123 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 201 ? 3 'binding site for residue MN A 201' AC2 Software A MN 202 ? 2 'binding site for residue MN A 202' AC3 Software A DHF 203 ? 18 'binding site for residue DHF A 203' AC4 Software A NDP 204 ? 27 'binding site for residue NDP A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASP A 116 ? ASP A 116 . ? 1_555 ? 2 AC1 3 HIS A 149 ? HIS A 149 . ? 1_555 ? 3 AC1 3 DOD F . ? DOD A 330 . ? 1_555 ? 4 AC2 2 ASP A 87 ? ASP A 87 . ? 1_555 ? 5 AC2 2 DOD F . ? DOD A 342 . ? 1_555 ? 6 AC3 18 ILE A 5 ? ILE A 5 . ? 1_555 ? 7 AC3 18 ALA A 6 ? ALA A 6 . ? 1_555 ? 8 AC3 18 ALA A 7 ? ALA A 7 . ? 1_555 ? 9 AC3 18 MET A 20 ? MET A 20 . ? 1_555 ? 10 AC3 18 ASP A 27 ? ASP A 27 . ? 1_555 ? 11 AC3 18 LEU A 28 ? LEU A 28 . ? 1_555 ? 12 AC3 18 PHE A 31 ? PHE A 31 . ? 1_555 ? 13 AC3 18 LYS A 32 ? LYS A 32 . ? 1_555 ? 14 AC3 18 ARG A 52 ? ARG A 52 . ? 1_555 ? 15 AC3 18 ARG A 57 ? ARG A 57 . ? 1_555 ? 16 AC3 18 ILE A 94 ? ILE A 94 . ? 1_555 ? 17 AC3 18 THR A 113 ? THR A 113 . ? 1_555 ? 18 AC3 18 NDP E . ? NDP A 204 . ? 1_555 ? 19 AC3 18 DOD F . ? DOD A 365 . ? 1_555 ? 20 AC3 18 DOD F . ? DOD A 371 . ? 1_555 ? 21 AC3 18 DOD F . ? DOD A 382 . ? 1_555 ? 22 AC3 18 DOD F . ? DOD A 390 . ? 1_555 ? 23 AC3 18 DOD F . ? DOD A 412 . ? 1_555 ? 24 AC4 27 ALA A 6 ? ALA A 6 . ? 1_555 ? 25 AC4 27 ALA A 7 ? ALA A 7 . ? 1_555 ? 26 AC4 27 ILE A 14 ? ILE A 14 . ? 1_555 ? 27 AC4 27 ASN A 18 ? ASN A 18 . ? 1_555 ? 28 AC4 27 ALA A 19 ? ALA A 19 . ? 1_555 ? 29 AC4 27 MET A 20 ? MET A 20 . ? 1_555 ? 30 AC4 27 GLY A 43 ? GLY A 43 . ? 1_555 ? 31 AC4 27 ARG A 44 ? ARG A 44 . ? 1_555 ? 32 AC4 27 HIS A 45 ? HIS A 45 . ? 1_555 ? 33 AC4 27 THR A 46 ? THR A 46 . ? 1_555 ? 34 AC4 27 LEU A 62 ? LEU A 62 . ? 1_555 ? 35 AC4 27 SER A 63 ? SER A 63 . ? 1_555 ? 36 AC4 27 SER A 64 ? SER A 64 . ? 1_555 ? 37 AC4 27 LYS A 76 ? LYS A 76 . ? 1_555 ? 38 AC4 27 ILE A 94 ? ILE A 94 . ? 1_555 ? 39 AC4 27 GLY A 96 ? GLY A 96 . ? 1_555 ? 40 AC4 27 GLY A 97 ? GLY A 97 . ? 1_555 ? 41 AC4 27 ARG A 98 ? ARG A 98 . ? 1_555 ? 42 AC4 27 VAL A 99 ? VAL A 99 . ? 1_555 ? 43 AC4 27 TYR A 100 ? TYR A 100 . ? 1_555 ? 44 AC4 27 GLN A 102 ? GLN A 102 . ? 1_555 ? 45 AC4 27 DHF D . ? DHF A 203 . ? 1_555 ? 46 AC4 27 DOD F . ? DOD A 308 . ? 1_555 ? 47 AC4 27 DOD F . ? DOD A 344 . ? 1_555 ? 48 AC4 27 DOD F . ? DOD A 369 . ? 1_555 ? 49 AC4 27 DOD F . ? DOD A 390 . ? 1_555 ? 50 AC4 27 DOD F . ? DOD A 402 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A DOD 331 ? ? D2 A DOD 350 ? ? 1.54 2 1 OD2 A ASP 116 ? A D2 A DOD 301 ? ? 1.55 3 1 OE1 A GLU 157 ? ? D1 A DOD 304 ? ? 1.58 4 1 DH21 A ARG 52 ? B O A DHF 203 ? ? 1.59 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 DOD _pdbx_validate_symm_contact.auth_seq_id_1 302 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 DOD _pdbx_validate_symm_contact.auth_seq_id_2 321 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_645 _pdbx_validate_symm_contact.dist 2.07 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 12 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 12 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 12 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 124.18 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.88 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 69 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -169.80 _pdbx_validate_torsion.psi 117.05 # _phasing.method MR # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DHF N1 N Y N 88 DHF C2 C Y N 89 DHF NA2 N N N 90 DHF N3 N Y N 91 DHF C4 C Y N 92 DHF O4 O N N 93 DHF C4A C Y N 94 DHF N5 N N N 95 DHF C6 C N N 96 DHF C7 C N N 97 DHF N8 N N N 98 DHF C8A C Y N 99 DHF C9 C N N 100 DHF N10 N N N 101 DHF C11 C Y N 102 DHF C12 C Y N 103 DHF C13 C Y N 104 DHF C14 C Y N 105 DHF C15 C Y N 106 DHF C16 C Y N 107 DHF C C N N 108 DHF O O N N 109 DHF N N N N 110 DHF CA C N S 111 DHF CB C N N 112 DHF CG C N N 113 DHF CD C N N 114 DHF OE1 O N N 115 DHF OE2 O N N 116 DHF CT C N N 117 DHF O1 O N N 118 DHF O2 O N N 119 DHF HN1 H N N 120 DHF HN21 H N N 121 DHF HN22 H N N 122 DHF H71 H N N 123 DHF H72 H N N 124 DHF HN8 H N N 125 DHF H91 H N N 126 DHF H92 H N N 127 DHF HN0 H N N 128 DHF H12 H N N 129 DHF H13 H N N 130 DHF H15 H N N 131 DHF H16 H N N 132 DHF HN H N N 133 DHF HA H N N 134 DHF HB1 H N N 135 DHF HB2 H N N 136 DHF HG1 H N N 137 DHF HG2 H N N 138 DHF HOE2 H N N 139 DHF HO2 H N N 140 DOD O O N N 141 DOD D1 D N N 142 DOD D2 D N N 143 GLN N N N N 144 GLN CA C N S 145 GLN C C N N 146 GLN O O N N 147 GLN CB C N N 148 GLN CG C N N 149 GLN CD C N N 150 GLN OE1 O N N 151 GLN NE2 N N N 152 GLN OXT O N N 153 GLN H H N N 154 GLN H2 H N N 155 GLN HA H N N 156 GLN HB2 H N N 157 GLN HB3 H N N 158 GLN HG2 H N N 159 GLN HG3 H N N 160 GLN HE21 H N N 161 GLN HE22 H N N 162 GLN HXT H N N 163 GLU N N N N 164 GLU CA C N S 165 GLU C C N N 166 GLU O O N N 167 GLU CB C N N 168 GLU CG C N N 169 GLU CD C N N 170 GLU OE1 O N N 171 GLU OE2 O N N 172 GLU OXT O N N 173 GLU H H N N 174 GLU H2 H N N 175 GLU HA H N N 176 GLU HB2 H N N 177 GLU HB3 H N N 178 GLU HG2 H N N 179 GLU HG3 H N N 180 GLU HE2 H N N 181 GLU HXT H N N 182 GLY N N N N 183 GLY CA C N N 184 GLY C C N N 185 GLY O O N N 186 GLY OXT O N N 187 GLY H H N N 188 GLY H2 H N N 189 GLY HA2 H N N 190 GLY HA3 H N N 191 GLY HXT H N N 192 HIS N N N N 193 HIS CA C N S 194 HIS C C N N 195 HIS O O N N 196 HIS CB C N N 197 HIS CG C Y N 198 HIS ND1 N Y N 199 HIS CD2 C Y N 200 HIS CE1 C Y N 201 HIS NE2 N Y N 202 HIS OXT O N N 203 HIS H H N N 204 HIS H2 H N N 205 HIS HA H N N 206 HIS HB2 H N N 207 HIS HB3 H N N 208 HIS HD1 H N N 209 HIS HD2 H N N 210 HIS HE1 H N N 211 HIS HE2 H N N 212 HIS HXT H N N 213 ILE N N N N 214 ILE CA C N S 215 ILE C C N N 216 ILE O O N N 217 ILE CB C N S 218 ILE CG1 C N N 219 ILE CG2 C N N 220 ILE CD1 C N N 221 ILE OXT O N N 222 ILE H H N N 223 ILE H2 H N N 224 ILE HA H N N 225 ILE HB H N N 226 ILE HG12 H N N 227 ILE HG13 H N N 228 ILE HG21 H N N 229 ILE HG22 H N N 230 ILE HG23 H N N 231 ILE HD11 H N N 232 ILE HD12 H N N 233 ILE HD13 H N N 234 ILE HXT H N N 235 LEU N N N N 236 LEU CA C N S 237 LEU C C N N 238 LEU O O N N 239 LEU CB C N N 240 LEU CG C N N 241 LEU CD1 C N N 242 LEU CD2 C N N 243 LEU OXT O N N 244 LEU H H N N 245 LEU H2 H N N 246 LEU HA H N N 247 LEU HB2 H N N 248 LEU HB3 H N N 249 LEU HG H N N 250 LEU HD11 H N N 251 LEU HD12 H N N 252 LEU HD13 H N N 253 LEU HD21 H N N 254 LEU HD22 H N N 255 LEU HD23 H N N 256 LEU HXT H N N 257 LYS N N N N 258 LYS CA C N S 259 LYS C C N N 260 LYS O O N N 261 LYS CB C N N 262 LYS CG C N N 263 LYS CD C N N 264 LYS CE C N N 265 LYS NZ N N N 266 LYS OXT O N N 267 LYS H H N N 268 LYS H2 H N N 269 LYS HA H N N 270 LYS HB2 H N N 271 LYS HB3 H N N 272 LYS HG2 H N N 273 LYS HG3 H N N 274 LYS HD2 H N N 275 LYS HD3 H N N 276 LYS HE2 H N N 277 LYS HE3 H N N 278 LYS HZ1 H N N 279 LYS HZ2 H N N 280 LYS HZ3 H N N 281 LYS HXT H N N 282 MET N N N N 283 MET CA C N S 284 MET C C N N 285 MET O O N N 286 MET CB C N N 287 MET CG C N N 288 MET SD S N N 289 MET CE C N N 290 MET OXT O N N 291 MET H H N N 292 MET H2 H N N 293 MET HA H N N 294 MET HB2 H N N 295 MET HB3 H N N 296 MET HG2 H N N 297 MET HG3 H N N 298 MET HE1 H N N 299 MET HE2 H N N 300 MET HE3 H N N 301 MET HXT H N N 302 MN MN MN N N 303 NDP PA P N S 304 NDP O1A O N N 305 NDP O2A O N N 306 NDP O5B O N N 307 NDP C5B C N N 308 NDP C4B C N R 309 NDP O4B O N N 310 NDP C3B C N R 311 NDP O3B O N N 312 NDP C2B C N R 313 NDP O2B O N N 314 NDP C1B C N R 315 NDP N9A N Y N 316 NDP C8A C Y N 317 NDP N7A N Y N 318 NDP C5A C Y N 319 NDP C6A C Y N 320 NDP N6A N N N 321 NDP N1A N Y N 322 NDP C2A C Y N 323 NDP N3A N Y N 324 NDP C4A C Y N 325 NDP O3 O N N 326 NDP PN P N S 327 NDP O1N O N N 328 NDP O2N O N N 329 NDP O5D O N N 330 NDP C5D C N N 331 NDP C4D C N R 332 NDP O4D O N N 333 NDP C3D C N S 334 NDP O3D O N N 335 NDP C2D C N R 336 NDP O2D O N N 337 NDP C1D C N R 338 NDP N1N N N N 339 NDP C2N C N N 340 NDP C3N C N N 341 NDP C7N C N N 342 NDP O7N O N N 343 NDP N7N N N N 344 NDP C4N C N N 345 NDP C5N C N N 346 NDP C6N C N N 347 NDP P2B P N N 348 NDP O1X O N N 349 NDP O2X O N N 350 NDP O3X O N N 351 NDP HOA2 H N N 352 NDP H51A H N N 353 NDP H52A H N N 354 NDP H4B H N N 355 NDP H3B H N N 356 NDP HO3A H N N 357 NDP H2B H N N 358 NDP H1B H N N 359 NDP H8A H N N 360 NDP H61A H N N 361 NDP H62A H N N 362 NDP H2A H N N 363 NDP H21N H N N 364 NDP H51N H N N 365 NDP H52N H N N 366 NDP H4D H N N 367 NDP H3D H N N 368 NDP HO3N H N N 369 NDP H2D H N N 370 NDP HO2N H N N 371 NDP H1D H N N 372 NDP H2N H N N 373 NDP H71N H N N 374 NDP H72N H N N 375 NDP H41N H N N 376 NDP H42N H N N 377 NDP H5N H N N 378 NDP H6N H N N 379 NDP HOP2 H N N 380 NDP HOP3 H N N 381 PHE N N N N 382 PHE CA C N S 383 PHE C C N N 384 PHE O O N N 385 PHE CB C N N 386 PHE CG C Y N 387 PHE CD1 C Y N 388 PHE CD2 C Y N 389 PHE CE1 C Y N 390 PHE CE2 C Y N 391 PHE CZ C Y N 392 PHE OXT O N N 393 PHE H H N N 394 PHE H2 H N N 395 PHE HA H N N 396 PHE HB2 H N N 397 PHE HB3 H N N 398 PHE HD1 H N N 399 PHE HD2 H N N 400 PHE HE1 H N N 401 PHE HE2 H N N 402 PHE HZ H N N 403 PHE HXT H N N 404 PRO N N N N 405 PRO CA C N S 406 PRO C C N N 407 PRO O O N N 408 PRO CB C N N 409 PRO CG C N N 410 PRO CD C N N 411 PRO OXT O N N 412 PRO H H N N 413 PRO HA H N N 414 PRO HB2 H N N 415 PRO HB3 H N N 416 PRO HG2 H N N 417 PRO HG3 H N N 418 PRO HD2 H N N 419 PRO HD3 H N N 420 PRO HXT H N N 421 SER N N N N 422 SER CA C N S 423 SER C C N N 424 SER O O N N 425 SER CB C N N 426 SER OG O N N 427 SER OXT O N N 428 SER H H N N 429 SER H2 H N N 430 SER HA H N N 431 SER HB2 H N N 432 SER HB3 H N N 433 SER HG H N N 434 SER HXT H N N 435 THR N N N N 436 THR CA C N S 437 THR C C N N 438 THR O O N N 439 THR CB C N R 440 THR OG1 O N N 441 THR CG2 C N N 442 THR OXT O N N 443 THR H H N N 444 THR H2 H N N 445 THR HA H N N 446 THR HB H N N 447 THR HG1 H N N 448 THR HG21 H N N 449 THR HG22 H N N 450 THR HG23 H N N 451 THR HXT H N N 452 TRP N N N N 453 TRP CA C N S 454 TRP C C N N 455 TRP O O N N 456 TRP CB C N N 457 TRP CG C Y N 458 TRP CD1 C Y N 459 TRP CD2 C Y N 460 TRP NE1 N Y N 461 TRP CE2 C Y N 462 TRP CE3 C Y N 463 TRP CZ2 C Y N 464 TRP CZ3 C Y N 465 TRP CH2 C Y N 466 TRP OXT O N N 467 TRP H H N N 468 TRP H2 H N N 469 TRP HA H N N 470 TRP HB2 H N N 471 TRP HB3 H N N 472 TRP HD1 H N N 473 TRP HE1 H N N 474 TRP HE3 H N N 475 TRP HZ2 H N N 476 TRP HZ3 H N N 477 TRP HH2 H N N 478 TRP HXT H N N 479 TYR N N N N 480 TYR CA C N S 481 TYR C C N N 482 TYR O O N N 483 TYR CB C N N 484 TYR CG C Y N 485 TYR CD1 C Y N 486 TYR CD2 C Y N 487 TYR CE1 C Y N 488 TYR CE2 C Y N 489 TYR CZ C Y N 490 TYR OH O N N 491 TYR OXT O N N 492 TYR H H N N 493 TYR H2 H N N 494 TYR HA H N N 495 TYR HB2 H N N 496 TYR HB3 H N N 497 TYR HD1 H N N 498 TYR HD2 H N N 499 TYR HE1 H N N 500 TYR HE2 H N N 501 TYR HH H N N 502 TYR HXT H N N 503 VAL N N N N 504 VAL CA C N S 505 VAL C C N N 506 VAL O O N N 507 VAL CB C N N 508 VAL CG1 C N N 509 VAL CG2 C N N 510 VAL OXT O N N 511 VAL H H N N 512 VAL H2 H N N 513 VAL HA H N N 514 VAL HB H N N 515 VAL HG11 H N N 516 VAL HG12 H N N 517 VAL HG13 H N N 518 VAL HG21 H N N 519 VAL HG22 H N N 520 VAL HG23 H N N 521 VAL HXT H N N 522 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DHF N1 C2 sing Y N 83 DHF N1 C8A sing Y N 84 DHF N1 HN1 sing N N 85 DHF C2 NA2 sing N N 86 DHF C2 N3 doub Y N 87 DHF NA2 HN21 sing N N 88 DHF NA2 HN22 sing N N 89 DHF N3 C4 sing Y N 90 DHF C4 O4 doub N N 91 DHF C4 C4A sing Y N 92 DHF C4A N5 sing N N 93 DHF C4A C8A doub Y N 94 DHF N5 C6 doub N N 95 DHF C6 C7 sing N N 96 DHF C6 C9 sing N N 97 DHF C7 N8 sing N N 98 DHF C7 H71 sing N N 99 DHF C7 H72 sing N N 100 DHF N8 C8A sing N N 101 DHF N8 HN8 sing N N 102 DHF C9 N10 sing N N 103 DHF C9 H91 sing N N 104 DHF C9 H92 sing N N 105 DHF N10 C14 sing N N 106 DHF N10 HN0 sing N N 107 DHF C11 C12 doub Y N 108 DHF C11 C16 sing Y N 109 DHF C11 C sing N N 110 DHF C12 C13 sing Y N 111 DHF C12 H12 sing N N 112 DHF C13 C14 doub Y N 113 DHF C13 H13 sing N N 114 DHF C14 C15 sing Y N 115 DHF C15 C16 doub Y N 116 DHF C15 H15 sing N N 117 DHF C16 H16 sing N N 118 DHF C O doub N N 119 DHF C N sing N N 120 DHF N CA sing N N 121 DHF N HN sing N N 122 DHF CA CB sing N N 123 DHF CA CT sing N N 124 DHF CA HA sing N N 125 DHF CB CG sing N N 126 DHF CB HB1 sing N N 127 DHF CB HB2 sing N N 128 DHF CG CD sing N N 129 DHF CG HG1 sing N N 130 DHF CG HG2 sing N N 131 DHF CD OE1 doub N N 132 DHF CD OE2 sing N N 133 DHF OE2 HOE2 sing N N 134 DHF CT O1 doub N N 135 DHF CT O2 sing N N 136 DHF O2 HO2 sing N N 137 DOD O D1 sing N N 138 DOD O D2 sing N N 139 GLN N CA sing N N 140 GLN N H sing N N 141 GLN N H2 sing N N 142 GLN CA C sing N N 143 GLN CA CB sing N N 144 GLN CA HA sing N N 145 GLN C O doub N N 146 GLN C OXT sing N N 147 GLN CB CG sing N N 148 GLN CB HB2 sing N N 149 GLN CB HB3 sing N N 150 GLN CG CD sing N N 151 GLN CG HG2 sing N N 152 GLN CG HG3 sing N N 153 GLN CD OE1 doub N N 154 GLN CD NE2 sing N N 155 GLN NE2 HE21 sing N N 156 GLN NE2 HE22 sing N N 157 GLN OXT HXT sing N N 158 GLU N CA sing N N 159 GLU N H sing N N 160 GLU N H2 sing N N 161 GLU CA C sing N N 162 GLU CA CB sing N N 163 GLU CA HA sing N N 164 GLU C O doub N N 165 GLU C OXT sing N N 166 GLU CB CG sing N N 167 GLU CB HB2 sing N N 168 GLU CB HB3 sing N N 169 GLU CG CD sing N N 170 GLU CG HG2 sing N N 171 GLU CG HG3 sing N N 172 GLU CD OE1 doub N N 173 GLU CD OE2 sing N N 174 GLU OE2 HE2 sing N N 175 GLU OXT HXT sing N N 176 GLY N CA sing N N 177 GLY N H sing N N 178 GLY N H2 sing N N 179 GLY CA C sing N N 180 GLY CA HA2 sing N N 181 GLY CA HA3 sing N N 182 GLY C O doub N N 183 GLY C OXT sing N N 184 GLY OXT HXT sing N N 185 HIS N CA sing N N 186 HIS N H sing N N 187 HIS N H2 sing N N 188 HIS CA C sing N N 189 HIS CA CB sing N N 190 HIS CA HA sing N N 191 HIS C O doub N N 192 HIS C OXT sing N N 193 HIS CB CG sing N N 194 HIS CB HB2 sing N N 195 HIS CB HB3 sing N N 196 HIS CG ND1 sing Y N 197 HIS CG CD2 doub Y N 198 HIS ND1 CE1 doub Y N 199 HIS ND1 HD1 sing N N 200 HIS CD2 NE2 sing Y N 201 HIS CD2 HD2 sing N N 202 HIS CE1 NE2 sing Y N 203 HIS CE1 HE1 sing N N 204 HIS NE2 HE2 sing N N 205 HIS OXT HXT sing N N 206 ILE N CA sing N N 207 ILE N H sing N N 208 ILE N H2 sing N N 209 ILE CA C sing N N 210 ILE CA CB sing N N 211 ILE CA HA sing N N 212 ILE C O doub N N 213 ILE C OXT sing N N 214 ILE CB CG1 sing N N 215 ILE CB CG2 sing N N 216 ILE CB HB sing N N 217 ILE CG1 CD1 sing N N 218 ILE CG1 HG12 sing N N 219 ILE CG1 HG13 sing N N 220 ILE CG2 HG21 sing N N 221 ILE CG2 HG22 sing N N 222 ILE CG2 HG23 sing N N 223 ILE CD1 HD11 sing N N 224 ILE CD1 HD12 sing N N 225 ILE CD1 HD13 sing N N 226 ILE OXT HXT sing N N 227 LEU N CA sing N N 228 LEU N H sing N N 229 LEU N H2 sing N N 230 LEU CA C sing N N 231 LEU CA CB sing N N 232 LEU CA HA sing N N 233 LEU C O doub N N 234 LEU C OXT sing N N 235 LEU CB CG sing N N 236 LEU CB HB2 sing N N 237 LEU CB HB3 sing N N 238 LEU CG CD1 sing N N 239 LEU CG CD2 sing N N 240 LEU CG HG sing N N 241 LEU CD1 HD11 sing N N 242 LEU CD1 HD12 sing N N 243 LEU CD1 HD13 sing N N 244 LEU CD2 HD21 sing N N 245 LEU CD2 HD22 sing N N 246 LEU CD2 HD23 sing N N 247 LEU OXT HXT sing N N 248 LYS N CA sing N N 249 LYS N H sing N N 250 LYS N H2 sing N N 251 LYS CA C sing N N 252 LYS CA CB sing N N 253 LYS CA HA sing N N 254 LYS C O doub N N 255 LYS C OXT sing N N 256 LYS CB CG sing N N 257 LYS CB HB2 sing N N 258 LYS CB HB3 sing N N 259 LYS CG CD sing N N 260 LYS CG HG2 sing N N 261 LYS CG HG3 sing N N 262 LYS CD CE sing N N 263 LYS CD HD2 sing N N 264 LYS CD HD3 sing N N 265 LYS CE NZ sing N N 266 LYS CE HE2 sing N N 267 LYS CE HE3 sing N N 268 LYS NZ HZ1 sing N N 269 LYS NZ HZ2 sing N N 270 LYS NZ HZ3 sing N N 271 LYS OXT HXT sing N N 272 MET N CA sing N N 273 MET N H sing N N 274 MET N H2 sing N N 275 MET CA C sing N N 276 MET CA CB sing N N 277 MET CA HA sing N N 278 MET C O doub N N 279 MET C OXT sing N N 280 MET CB CG sing N N 281 MET CB HB2 sing N N 282 MET CB HB3 sing N N 283 MET CG SD sing N N 284 MET CG HG2 sing N N 285 MET CG HG3 sing N N 286 MET SD CE sing N N 287 MET CE HE1 sing N N 288 MET CE HE2 sing N N 289 MET CE HE3 sing N N 290 MET OXT HXT sing N N 291 NDP PA O1A doub N N 292 NDP PA O2A sing N N 293 NDP PA O5B sing N N 294 NDP PA O3 sing N N 295 NDP O2A HOA2 sing N N 296 NDP O5B C5B sing N N 297 NDP C5B C4B sing N N 298 NDP C5B H51A sing N N 299 NDP C5B H52A sing N N 300 NDP C4B O4B sing N N 301 NDP C4B C3B sing N N 302 NDP C4B H4B sing N N 303 NDP O4B C1B sing N N 304 NDP C3B O3B sing N N 305 NDP C3B C2B sing N N 306 NDP C3B H3B sing N N 307 NDP O3B HO3A sing N N 308 NDP C2B O2B sing N N 309 NDP C2B C1B sing N N 310 NDP C2B H2B sing N N 311 NDP O2B P2B sing N N 312 NDP C1B N9A sing N N 313 NDP C1B H1B sing N N 314 NDP N9A C8A sing Y N 315 NDP N9A C4A sing Y N 316 NDP C8A N7A doub Y N 317 NDP C8A H8A sing N N 318 NDP N7A C5A sing Y N 319 NDP C5A C6A sing Y N 320 NDP C5A C4A doub Y N 321 NDP C6A N6A sing N N 322 NDP C6A N1A doub Y N 323 NDP N6A H61A sing N N 324 NDP N6A H62A sing N N 325 NDP N1A C2A sing Y N 326 NDP C2A N3A doub Y N 327 NDP C2A H2A sing N N 328 NDP N3A C4A sing Y N 329 NDP O3 PN sing N N 330 NDP PN O1N doub N N 331 NDP PN O2N sing N N 332 NDP PN O5D sing N N 333 NDP O2N H21N sing N N 334 NDP O5D C5D sing N N 335 NDP C5D C4D sing N N 336 NDP C5D H51N sing N N 337 NDP C5D H52N sing N N 338 NDP C4D O4D sing N N 339 NDP C4D C3D sing N N 340 NDP C4D H4D sing N N 341 NDP O4D C1D sing N N 342 NDP C3D O3D sing N N 343 NDP C3D C2D sing N N 344 NDP C3D H3D sing N N 345 NDP O3D HO3N sing N N 346 NDP C2D O2D sing N N 347 NDP C2D C1D sing N N 348 NDP C2D H2D sing N N 349 NDP O2D HO2N sing N N 350 NDP C1D N1N sing N N 351 NDP C1D H1D sing N N 352 NDP N1N C2N sing N N 353 NDP N1N C6N sing N N 354 NDP C2N C3N doub N N 355 NDP C2N H2N sing N N 356 NDP C3N C7N sing N N 357 NDP C3N C4N sing N N 358 NDP C7N O7N doub N N 359 NDP C7N N7N sing N N 360 NDP N7N H71N sing N N 361 NDP N7N H72N sing N N 362 NDP C4N C5N sing N N 363 NDP C4N H41N sing N N 364 NDP C4N H42N sing N N 365 NDP C5N C6N doub N N 366 NDP C5N H5N sing N N 367 NDP C6N H6N sing N N 368 NDP P2B O1X doub N N 369 NDP P2B O2X sing N N 370 NDP P2B O3X sing N N 371 NDP O2X HOP2 sing N N 372 NDP O3X HOP3 sing N N 373 PHE N CA sing N N 374 PHE N H sing N N 375 PHE N H2 sing N N 376 PHE CA C sing N N 377 PHE CA CB sing N N 378 PHE CA HA sing N N 379 PHE C O doub N N 380 PHE C OXT sing N N 381 PHE CB CG sing N N 382 PHE CB HB2 sing N N 383 PHE CB HB3 sing N N 384 PHE CG CD1 doub Y N 385 PHE CG CD2 sing Y N 386 PHE CD1 CE1 sing Y N 387 PHE CD1 HD1 sing N N 388 PHE CD2 CE2 doub Y N 389 PHE CD2 HD2 sing N N 390 PHE CE1 CZ doub Y N 391 PHE CE1 HE1 sing N N 392 PHE CE2 CZ sing Y N 393 PHE CE2 HE2 sing N N 394 PHE CZ HZ sing N N 395 PHE OXT HXT sing N N 396 PRO N CA sing N N 397 PRO N CD sing N N 398 PRO N H sing N N 399 PRO CA C sing N N 400 PRO CA CB sing N N 401 PRO CA HA sing N N 402 PRO C O doub N N 403 PRO C OXT sing N N 404 PRO CB CG sing N N 405 PRO CB HB2 sing N N 406 PRO CB HB3 sing N N 407 PRO CG CD sing N N 408 PRO CG HG2 sing N N 409 PRO CG HG3 sing N N 410 PRO CD HD2 sing N N 411 PRO CD HD3 sing N N 412 PRO OXT HXT sing N N 413 SER N CA sing N N 414 SER N H sing N N 415 SER N H2 sing N N 416 SER CA C sing N N 417 SER CA CB sing N N 418 SER CA HA sing N N 419 SER C O doub N N 420 SER C OXT sing N N 421 SER CB OG sing N N 422 SER CB HB2 sing N N 423 SER CB HB3 sing N N 424 SER OG HG sing N N 425 SER OXT HXT sing N N 426 THR N CA sing N N 427 THR N H sing N N 428 THR N H2 sing N N 429 THR CA C sing N N 430 THR CA CB sing N N 431 THR CA HA sing N N 432 THR C O doub N N 433 THR C OXT sing N N 434 THR CB OG1 sing N N 435 THR CB CG2 sing N N 436 THR CB HB sing N N 437 THR OG1 HG1 sing N N 438 THR CG2 HG21 sing N N 439 THR CG2 HG22 sing N N 440 THR CG2 HG23 sing N N 441 THR OXT HXT sing N N 442 TRP N CA sing N N 443 TRP N H sing N N 444 TRP N H2 sing N N 445 TRP CA C sing N N 446 TRP CA CB sing N N 447 TRP CA HA sing N N 448 TRP C O doub N N 449 TRP C OXT sing N N 450 TRP CB CG sing N N 451 TRP CB HB2 sing N N 452 TRP CB HB3 sing N N 453 TRP CG CD1 doub Y N 454 TRP CG CD2 sing Y N 455 TRP CD1 NE1 sing Y N 456 TRP CD1 HD1 sing N N 457 TRP CD2 CE2 doub Y N 458 TRP CD2 CE3 sing Y N 459 TRP NE1 CE2 sing Y N 460 TRP NE1 HE1 sing N N 461 TRP CE2 CZ2 sing Y N 462 TRP CE3 CZ3 doub Y N 463 TRP CE3 HE3 sing N N 464 TRP CZ2 CH2 doub Y N 465 TRP CZ2 HZ2 sing N N 466 TRP CZ3 CH2 sing Y N 467 TRP CZ3 HZ3 sing N N 468 TRP CH2 HH2 sing N N 469 TRP OXT HXT sing N N 470 TYR N CA sing N N 471 TYR N H sing N N 472 TYR N H2 sing N N 473 TYR CA C sing N N 474 TYR CA CB sing N N 475 TYR CA HA sing N N 476 TYR C O doub N N 477 TYR C OXT sing N N 478 TYR CB CG sing N N 479 TYR CB HB2 sing N N 480 TYR CB HB3 sing N N 481 TYR CG CD1 doub Y N 482 TYR CG CD2 sing Y N 483 TYR CD1 CE1 sing Y N 484 TYR CD1 HD1 sing N N 485 TYR CD2 CE2 doub Y N 486 TYR CD2 HD2 sing N N 487 TYR CE1 CZ doub Y N 488 TYR CE1 HE1 sing N N 489 TYR CE2 CZ sing Y N 490 TYR CE2 HE2 sing N N 491 TYR CZ OH sing N N 492 TYR OH HH sing N N 493 TYR OXT HXT sing N N 494 VAL N CA sing N N 495 VAL N H sing N N 496 VAL N H2 sing N N 497 VAL CA C sing N N 498 VAL CA CB sing N N 499 VAL CA HA sing N N 500 VAL C O doub N N 501 VAL C OXT sing N N 502 VAL CB CG1 sing N N 503 VAL CB CG2 sing N N 504 VAL CB HB sing N N 505 VAL CG1 HG11 sing N N 506 VAL CG1 HG12 sing N N 507 VAL CG1 HG13 sing N N 508 VAL CG2 HG21 sing N N 509 VAL CG2 HG22 sing N N 510 VAL CG2 HG23 sing N N 511 VAL OXT HXT sing N N 512 # loop_ _pdbx_audit_support.funding_organization _pdbx_audit_support.country _pdbx_audit_support.grant_number _pdbx_audit_support.ordinal 'Department of Energy (DOE, United States)' 'United States' 'FWP ERKP752' 1 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01GM071939 2 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' 'United States' R01GM092999 3 'Yangzhou University' China 2013CXJ083 4 'State Education Ministry' China ? 5 # _pdbx_initial_refinement_model.accession_code 1RX2 _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.details ? # _atom_sites.entry_id 4PDJ _atom_sites.fract_transf_matrix[1][1] 0.029160 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.021918 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010104 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C D H MN N O P S # loop_