HEADER TRANSPORT PROTEIN 28-APR-14 4PFB TITLE CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM TITLE 2 FUSOBACTERIUM NUCLEATUN (FN1258, TARGET EFI-510120) WITH BOUND SN- TITLE 3 GLYCEROL-3-PHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: C4-DICARBOXYLATE-BINDING PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: FUSOBACTERIUM NUCLEATUM SUBSP. NUCLEATUM; SOURCE 3 ORGANISM_TAXID: 190304; SOURCE 4 STRAIN: ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131; SOURCE 5 GENE: FN1258; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN,M.STEAD, AUTHOR 2 J.D.ATTONITO,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,B.HILLERICH,J.LOVE, AUTHOR 3 R.D.SEIDEL,K.L.WHALEN,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE AUTHOR 4 (EFI) REVDAT 6 27-SEP-23 4PFB 1 LINK REVDAT 5 25-DEC-19 4PFB 1 REMARK REVDAT 4 06-SEP-17 4PFB 1 REMARK REVDAT 3 26-AUG-15 4PFB 1 REMARK REVDAT 2 25-FEB-15 4PFB 1 JRNL REVDAT 1 14-MAY-14 4PFB 0 JRNL AUTH M.W.VETTING,N.AL-OBAIDI,S.ZHAO,B.SAN FRANCISCO,J.KIM, JRNL AUTH 2 D.J.WICHELECKI,J.T.BOUVIER,J.O.SOLBIATI,H.VU,X.ZHANG, JRNL AUTH 3 D.A.RODIONOV,J.D.LOVE,B.S.HILLERICH,R.D.SEIDEL,R.J.QUINN, JRNL AUTH 4 A.L.OSTERMAN,J.E.CRONAN,M.P.JACOBSON,J.A.GERLT,S.C.ALMO JRNL TITL EXPERIMENTAL STRATEGIES FOR FUNCTIONAL ANNOTATION AND JRNL TITL 2 METABOLISM DISCOVERY: TARGETED SCREENING OF SOLUTE BINDING JRNL TITL 3 PROTEINS AND UNBIASED PANNING OF METABOLOMES. JRNL REF BIOCHEMISTRY V. 54 909 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25540822 JRNL DOI 10.1021/BI501388Y REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.15 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 14870 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 753 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.1589 - 4.6151 0.99 2977 139 0.1639 0.1720 REMARK 3 2 4.6151 - 3.6639 1.00 2842 130 0.1363 0.1832 REMARK 3 3 3.6639 - 3.2010 1.00 2787 159 0.1661 0.2174 REMARK 3 4 3.2010 - 2.9084 1.00 2782 142 0.1951 0.2458 REMARK 3 5 2.9084 - 2.7000 1.00 2729 183 0.2170 0.2844 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.000 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 52.93 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.85 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2496 REMARK 3 ANGLE : 1.094 3378 REMARK 3 CHIRALITY : 0.072 380 REMARK 3 PLANARITY : 0.006 436 REMARK 3 DIHEDRAL : 15.400 914 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 24 THROUGH 53 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.1057 53.6812 47.6407 REMARK 3 T TENSOR REMARK 3 T11: 0.2670 T22: 0.1888 REMARK 3 T33: 0.2759 T12: 0.0143 REMARK 3 T13: 0.0496 T23: 0.1089 REMARK 3 L TENSOR REMARK 3 L11: 0.8222 L22: 3.3525 REMARK 3 L33: 1.2373 L12: 0.0402 REMARK 3 L13: 0.9311 L23: 0.9106 REMARK 3 S TENSOR REMARK 3 S11: 0.1443 S12: -0.3640 S13: -0.3268 REMARK 3 S21: 0.0020 S22: -0.2034 S23: -0.1383 REMARK 3 S31: 0.1249 S32: -0.0510 S33: 0.0761 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 54 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.4934 48.5343 47.6815 REMARK 3 T TENSOR REMARK 3 T11: 0.3071 T22: 0.2307 REMARK 3 T33: 0.2312 T12: 0.1634 REMARK 3 T13: 0.0562 T23: 0.0270 REMARK 3 L TENSOR REMARK 3 L11: 2.8436 L22: 2.5030 REMARK 3 L33: 3.0508 L12: -0.0313 REMARK 3 L13: 1.1867 L23: 0.9521 REMARK 3 S TENSOR REMARK 3 S11: 0.0965 S12: -0.2001 S13: -0.2779 REMARK 3 S21: -0.2958 S22: -0.1380 S23: -0.2227 REMARK 3 S31: 0.2588 S32: 0.0787 S33: 0.0365 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.7820 56.7081 42.1800 REMARK 3 T TENSOR REMARK 3 T11: 0.3474 T22: 0.4868 REMARK 3 T33: 0.4726 T12: 0.0519 REMARK 3 T13: 0.1877 T23: 0.0730 REMARK 3 L TENSOR REMARK 3 L11: 0.8218 L22: 2.7226 REMARK 3 L33: 3.8562 L12: 0.0553 REMARK 3 L13: 0.4440 L23: 0.2620 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: 0.0124 S13: -0.3750 REMARK 3 S21: -0.1917 S22: -0.2938 S23: -0.8192 REMARK 3 S31: -0.0471 S32: 1.3499 S33: 0.0666 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 220 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.3976 71.9524 47.2111 REMARK 3 T TENSOR REMARK 3 T11: 0.3652 T22: 0.3645 REMARK 3 T33: 0.3465 T12: -0.1800 REMARK 3 T13: 0.0101 T23: 0.0882 REMARK 3 L TENSOR REMARK 3 L11: 1.4758 L22: 1.6858 REMARK 3 L33: 0.8422 L12: 0.1855 REMARK 3 L13: -0.4697 L23: -0.6102 REMARK 3 S TENSOR REMARK 3 S11: -0.0441 S12: 0.0962 S13: 0.2221 REMARK 3 S21: -0.1827 S22: -0.0282 S23: -0.3979 REMARK 3 S31: -0.4996 S32: 0.5743 S33: 0.0294 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 221 THROUGH 248 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.5425 64.6870 44.4522 REMARK 3 T TENSOR REMARK 3 T11: 0.3493 T22: 0.3191 REMARK 3 T33: 0.2871 T12: -0.0651 REMARK 3 T13: 0.0498 T23: 0.0895 REMARK 3 L TENSOR REMARK 3 L11: 1.1328 L22: 3.1385 REMARK 3 L33: 2.0511 L12: -0.0538 REMARK 3 L13: 0.3268 L23: 1.1073 REMARK 3 S TENSOR REMARK 3 S11: -0.0133 S12: 0.1772 S13: 0.1267 REMARK 3 S21: -0.0735 S22: -0.1022 S23: -0.5878 REMARK 3 S31: -0.0490 S32: 0.2781 S33: 0.1036 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 249 THROUGH 283 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.3909 63.6369 45.1045 REMARK 3 T TENSOR REMARK 3 T11: 0.3673 T22: 0.1844 REMARK 3 T33: 0.3110 T12: 0.0098 REMARK 3 T13: -0.0049 T23: 0.0744 REMARK 3 L TENSOR REMARK 3 L11: 0.9945 L22: 5.0951 REMARK 3 L33: 4.8238 L12: -0.4421 REMARK 3 L13: -0.3204 L23: 3.8546 REMARK 3 S TENSOR REMARK 3 S11: -0.0785 S12: 0.2095 S13: 0.1304 REMARK 3 S21: -0.2067 S22: -0.3709 S23: 0.5398 REMARK 3 S31: -0.3996 S32: -0.1801 S33: 0.3442 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 284 THROUGH 313 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.1187 81.7996 44.3410 REMARK 3 T TENSOR REMARK 3 T11: 0.6850 T22: 0.5850 REMARK 3 T33: 0.5247 T12: -0.2849 REMARK 3 T13: 0.0287 T23: 0.1280 REMARK 3 L TENSOR REMARK 3 L11: 1.8306 L22: 0.2234 REMARK 3 L33: 2.1940 L12: 0.0569 REMARK 3 L13: -1.5911 L23: -0.3528 REMARK 3 S TENSOR REMARK 3 S11: 0.0343 S12: 0.3385 S13: 0.3378 REMARK 3 S21: 0.0475 S22: -0.1233 S23: -0.2450 REMARK 3 S31: -0.4307 S32: 0.2440 S33: -0.0080 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 314 THROUGH 330 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.6364 80.6640 28.7037 REMARK 3 T TENSOR REMARK 3 T11: 0.9803 T22: 0.2153 REMARK 3 T33: 0.2909 T12: -0.3378 REMARK 3 T13: -0.0024 T23: 0.5221 REMARK 3 L TENSOR REMARK 3 L11: 2.5310 L22: 1.2182 REMARK 3 L33: 0.6534 L12: -0.1571 REMARK 3 L13: -0.4818 L23: -0.1082 REMARK 3 S TENSOR REMARK 3 S11: -0.0779 S12: 0.4607 S13: 0.4552 REMARK 3 S21: -0.5977 S22: -0.1425 S23: 0.0077 REMARK 3 S31: -0.4049 S32: 0.1912 S33: -0.2211 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PFB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000201296. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-DEC-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20, SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14902 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 113.574 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 11.80 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.16600 REMARK 200 FOR THE DATA SET : 10.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.00 REMARK 200 R MERGE FOR SHELL (I) : 0.85400 REMARK 200 R SYM FOR SHELL (I) : 0.85400 REMARK 200 FOR SHELL : 0.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 4N6K REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.25 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (70.0 MG/ML, 10 MM HEPES PH REMARK 280 7.5, 5 MM DTT, 10 MM GLYCEROL 3-PHOSPHATE); RESERVOIR (0.2 M REMARK 280 ZINC ACETATE, 0.1 M IMIDAZOLE PH 6.5, 10 %(W/V) PEG 8000); REMARK 280 CRYOPROTECTION (80% RESERVOIR + 20% GLYCEROL, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z+1/2 REMARK 290 7555 Y,X,-Z+1/4 REMARK 290 8555 -Y,-X,-Z+3/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 39.96850 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 59.95275 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 19.98425 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 39.96850 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 19.98425 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 59.95275 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -109.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 515 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 LEU A 1 REMARK 465 ALA A 2 REMARK 465 LEU A 3 REMARK 465 VAL A 4 REMARK 465 ALA A 5 REMARK 465 CYS A 6 REMARK 465 GLY A 7 REMARK 465 GLY A 8 REMARK 465 LYS A 9 REMARK 465 LYS A 10 REMARK 465 GLU A 11 REMARK 465 GLU A 12 REMARK 465 ALA A 13 REMARK 465 THR A 14 REMARK 465 LYS A 15 REMARK 465 GLU A 16 REMARK 465 SER A 17 REMARK 465 GLY A 18 REMARK 465 ASP A 19 REMARK 465 ALA A 20 REMARK 465 LYS A 21 REMARK 465 GLN A 22 REMARK 465 GLU A 23 REMARK 465 GLY A 332 REMARK 465 LYS A 333 REMARK 465 ALA A 334 REMARK 465 GLU A 335 REMARK 465 ASN A 336 REMARK 465 LEU A 337 REMARK 465 TYR A 338 REMARK 465 PHE A 339 REMARK 465 GLN A 340 REMARK 465 GLY A 341 REMARK 465 HIS A 342 REMARK 465 HIS A 343 REMARK 465 HIS A 344 REMARK 465 HIS A 345 REMARK 465 HIS A 346 REMARK 465 HIS A 347 REMARK 465 HIS A 348 REMARK 465 HIS A 349 REMARK 465 HIS A 350 REMARK 465 HIS A 351 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 157 CG CD CE NZ REMARK 470 LYS A 163 CG CD CE NZ REMARK 470 LYS A 298 CG CD CE NZ REMARK 470 LYS A 317 CG CD CE NZ REMARK 470 LYS A 330 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 107 21.10 48.32 REMARK 500 SER A 140 144.94 -171.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 35 OD2 REMARK 620 2 ASP A 36 OD1 27.6 REMARK 620 3 IMD A 405 N3 104.4 76.9 REMARK 620 4 IMD A 406 N3 125.1 133.0 99.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 48 OE1 REMARK 620 2 GLU A 48 OE2 62.4 REMARK 620 3 GLU A 257 OE2 69.0 71.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 408 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 113 OE1 REMARK 620 2 GLU A 113 OE2 62.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 305 OD1 REMARK 620 2 ASP A 305 OD2 60.6 REMARK 620 3 ASP A 316 OD2 96.3 156.9 REMARK 620 4 HOH A 507 O 143.9 112.7 86.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IMD A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue G3P A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 408 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-510120 RELATED DB: TARGETTRACK DBREF 4PFB A 2 333 UNP Q8RE65 Q8RE65_FUSNN 2 333 SEQADV 4PFB MET A 0 UNP Q8RE65 INITIATING METHIONINE SEQADV 4PFB LEU A 1 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB ALA A 334 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB GLU A 335 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB ASN A 336 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB LEU A 337 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB TYR A 338 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB PHE A 339 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB GLN A 340 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB GLY A 341 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 342 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 343 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 344 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 345 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 346 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 347 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 348 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 349 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 350 UNP Q8RE65 EXPRESSION TAG SEQADV 4PFB HIS A 351 UNP Q8RE65 EXPRESSION TAG SEQRES 1 A 352 MET LEU ALA LEU VAL ALA CYS GLY GLY LYS LYS GLU GLU SEQRES 2 A 352 ALA THR LYS GLU SER GLY ASP ALA LYS GLN GLU ALA ARG SEQRES 3 A 352 VAL ILE LYS VAL THR THR LYS PHE VAL ASP ASP GLU GLN SEQRES 4 A 352 THR ALA LYS SER LEU VAL LYS VAL VAL GLU ALA ILE ASN SEQRES 5 A 352 GLN ARG SER ASN GLY THR LEU GLU LEU GLN LEU PHE THR SEQRES 6 A 352 SER GLY THR LEU PRO ILE GLY LYS ASP GLY MET GLU GLN SEQRES 7 A 352 VAL ALA ASN GLY SER ASP TRP ILE LEU VAL ASP GLY VAL SEQRES 8 A 352 ASN PHE LEU GLY ASP TYR VAL PRO ASP TYR ASN ALA VAL SEQRES 9 A 352 THR GLY PRO MET LEU TYR GLN SER PHE GLU GLU TYR LEU SEQRES 10 A 352 ARG MET VAL LYS THR PRO LEU VAL GLN ASP LEU ASN ALA SEQRES 11 A 352 GLN ALA LEU GLU LYS GLY ILE LYS VAL LEU SER LEU ASP SEQRES 12 A 352 TRP LEU PHE GLY PHE ARG ASN ILE GLU ALA LYS LYS PRO SEQRES 13 A 352 ILE LYS THR PRO GLU ASP MET LYS GLY LEU LYS LEU ARG SEQRES 14 A 352 VAL PRO THR SER GLN LEU TYR THR PHE THR ILE GLU ALA SEQRES 15 A 352 MET GLY GLY ASN PRO VAL ALA MET PRO TYR PRO ASP THR SEQRES 16 A 352 TYR ALA ALA LEU GLN GLN GLY VAL ILE ASP GLY LEU GLU SEQRES 17 A 352 GLY SER ILE LEU SER PHE TYR GLY THR LYS GLN TYR GLU SEQRES 18 A 352 ASN VAL LYS GLU TYR SER LEU THR ARG HIS LEU LEU GLY SEQRES 19 A 352 VAL SER ALA VAL CYS ILE SER LYS LYS CYS TRP ASP SER SEQRES 20 A 352 LEU THR ASP GLU GLN ARG THR ILE ILE GLN GLU GLU PHE SEQRES 21 A 352 ASP LYS GLY ALA LEU ASP ASN LEU THR GLU THR GLU LYS SEQRES 22 A 352 LEU GLU ASP GLU TYR ALA GLN LYS LEU LYS ASP ASN GLY SEQRES 23 A 352 VAL THR PHE HIS GLU VAL ASP ALA GLU ALA PHE ASN LYS SEQRES 24 A 352 ALA VAL ALA PRO VAL TYR ASP LYS PHE PRO LYS TRP THR SEQRES 25 A 352 PRO GLY ILE TYR ASP LYS ILE MET GLU ASN LEU THR GLN SEQRES 26 A 352 ILE ARG GLU ASP ILE LYS ASN GLY LYS ALA GLU ASN LEU SEQRES 27 A 352 TYR PHE GLN GLY HIS HIS HIS HIS HIS HIS HIS HIS HIS SEQRES 28 A 352 HIS HET ZN A 401 1 HET ZN A 402 1 HET ZN A 403 1 HET ZN A 404 1 HET IMD A 405 5 HET IMD A 406 5 HET G3P A 407 10 HET ZN A 408 1 HETNAM ZN ZINC ION HETNAM IMD IMIDAZOLE HETNAM G3P SN-GLYCEROL-3-PHOSPHATE FORMUL 2 ZN 5(ZN 2+) FORMUL 6 IMD 2(C3 H5 N2 1+) FORMUL 8 G3P C3 H9 O6 P FORMUL 10 HOH *81(H2 O) HELIX 1 AA1 GLU A 37 SER A 54 1 18 HELIX 2 AA2 ILE A 70 ASN A 80 1 11 HELIX 3 AA3 ASN A 91 TYR A 96 5 6 HELIX 4 AA4 VAL A 97 PRO A 98 5 2 HELIX 5 AA5 ASP A 99 THR A 104 1 6 HELIX 6 AA6 SER A 111 LYS A 120 1 10 HELIX 7 AA7 THR A 121 LYS A 134 1 14 HELIX 8 AA8 THR A 158 LYS A 163 1 6 HELIX 9 AA9 SER A 172 MET A 182 1 11 HELIX 10 AB1 PRO A 190 PRO A 192 5 3 HELIX 11 AB2 ASP A 193 GLN A 200 1 8 HELIX 12 AB3 SER A 209 THR A 216 1 8 HELIX 13 AB4 LYS A 217 ASN A 221 5 5 HELIX 14 AB5 LYS A 241 LEU A 247 1 7 HELIX 15 AB6 THR A 248 ASN A 284 1 37 HELIX 16 AB7 ASP A 292 ALA A 301 1 10 HELIX 17 AB8 PRO A 302 LYS A 306 5 5 HELIX 18 AB9 GLY A 313 ASN A 331 1 19 SHEET 1 AA1 5 LEU A 58 PHE A 63 0 SHEET 2 AA1 5 ARG A 25 THR A 31 1 N VAL A 29 O PHE A 63 SHEET 3 AA1 5 TRP A 84 GLY A 89 1 O ILE A 85 N LYS A 28 SHEET 4 AA1 5 LEU A 232 SER A 240 -1 O CYS A 238 N LEU A 86 SHEET 5 AA1 5 ILE A 136 PHE A 147 -1 N GLY A 146 O GLY A 233 SHEET 1 AA2 4 LEU A 206 GLY A 208 0 SHEET 2 AA2 4 ASN A 149 ALA A 152 -1 N GLU A 151 O LEU A 206 SHEET 3 AA2 4 GLU A 224 SER A 226 -1 O GLU A 224 N ALA A 152 SHEET 4 AA2 4 THR A 287 HIS A 289 1 O HIS A 289 N TYR A 225 SHEET 1 AA3 2 LYS A 166 VAL A 169 0 SHEET 2 AA3 2 ASN A 185 ALA A 188 1 O VAL A 187 N LEU A 167 LINK OD2 ASP A 35 ZN ZN A 401 1555 1555 1.94 LINK OD1 ASP A 36 ZN ZN A 401 1555 6566 2.18 LINK OE1 GLU A 48 ZN ZN A 402 1555 1555 2.13 LINK OE2 GLU A 48 ZN ZN A 402 1555 1555 2.05 LINK OE1 GLU A 113 ZN ZN A 408 1555 1555 2.17 LINK OE2 GLU A 113 ZN ZN A 408 1555 1555 2.01 LINK OE2 GLU A 257 ZN ZN A 402 1555 5556 2.32 LINK ND1 HIS A 289 ZN ZN A 404 1555 1555 2.10 LINK OD1 ASP A 305 ZN ZN A 403 1555 1555 2.14 LINK OD2 ASP A 305 ZN ZN A 403 1555 1555 2.14 LINK OD2 ASP A 316 ZN ZN A 403 1555 8665 1.93 LINK ZN ZN A 401 N3 IMD A 405 1555 1555 2.08 LINK ZN ZN A 401 N3 IMD A 406 1555 1555 2.23 LINK ZN ZN A 403 O HOH A 507 1555 8665 2.19 SITE 1 AC1 4 ASP A 35 ASP A 36 IMD A 405 IMD A 406 SITE 1 AC2 2 GLU A 48 GLU A 257 SITE 1 AC3 3 ASP A 305 ASP A 316 HOH A 507 SITE 1 AC4 1 HIS A 289 SITE 1 AC5 9 ASP A 35 ASP A 36 THR A 64 SER A 65 SITE 2 AC5 9 ZN A 401 IMD A 406 HOH A 503 HOH A 504 SITE 3 AC5 9 HOH A 510 SITE 1 AC6 7 ASP A 35 ASP A 36 LEU A 62 THR A 64 SITE 2 AC6 7 LYS A 217 ZN A 401 IMD A 405 SITE 1 AC7 10 LYS A 32 PHE A 33 GLU A 37 ARG A 148 SITE 2 AC7 10 ARG A 168 PRO A 170 TYR A 191 SER A 212 SITE 3 AC7 10 HOH A 527 HOH A 547 SITE 1 AC8 1 GLU A 113 CRYST1 113.574 113.574 79.937 90.00 90.00 90.00 P 43 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008805 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008805 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012510 0.00000