data_4PGO # _entry.id 4PGO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4PGO WWPDB D_1000201320 # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB 'Structure determined by Se-MET SAD' 1XE1 unspecified TargetTrack . SECSG-Pfu-880080-001 unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 4PGO _pdbx_database_status.recvd_initial_deposition_date 2014-05-02 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs . _pdbx_database_status.methods_development_category . _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Weinert, T.' 1 'Waltersperger, S.' 2 'Olieric, V.' 3 'Panepucci, E.' 4 'Chen, L.' 5 'Rose, J.P.' 6 'Wang, M.' 7 'Wang, B.C.' 8 'Southeast Collaboratory for Structural Genomics (SECSG)' 9 # _citation.abstract . _citation.abstract_id_CAS . _citation.book_id_ISBN . _citation.book_publisher ? _citation.book_publisher_city . _citation.book_title . _citation.coordinate_linkage . _citation.country US _citation.database_id_Medline . _citation.details . _citation.id primary _citation.journal_abbrev Nat.Methods _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1548-7105 _citation.journal_full . _citation.journal_issue . _citation.journal_volume 12 _citation.language . _citation.page_first 131 _citation.page_last 133 _citation.title 'Fast native-SAD phasing for routine macromolecular structure determination.' _citation.year 2015 _citation.database_id_CSD . _citation.pdbx_database_id_DOI 10.1038/nmeth.3211 _citation.pdbx_database_id_PubMed 25506719 _citation.unpublished_flag . # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Weinert, T.' 1 primary 'Olieric, V.' 2 primary 'Waltersperger, S.' 3 primary 'Panepucci, E.' 4 primary 'Chen, L.' 5 primary 'Zhang, H.' 6 primary 'Zhou, D.' 7 primary 'Rose, J.' 8 primary 'Ebihara, A.' 9 primary 'Kuramitsu, S.' 10 primary 'Li, D.' 11 primary 'Howe, N.' 12 primary 'Schnapp, G.' 13 primary 'Pautsch, A.' 14 primary 'Bargsten, K.' 15 primary 'Prota, A.E.' 16 primary 'Surana, P.' 17 primary 'Kottur, J.' 18 primary 'Nair, D.T.' 19 primary 'Basilico, F.' 20 primary 'Cecatiello, V.' 21 primary 'Pasqualato, S.' 22 primary 'Boland, A.' 23 primary 'Weichenrieder, O.' 24 primary 'Wang, B.C.' 25 primary 'Steinmetz, M.O.' 26 primary 'Caffrey, M.' 27 primary 'Wang, M.' 28 # _cell.entry_id 4PGO _cell.length_a 88.500 _cell.length_b 88.500 _cell.length_c 73.120 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PGO _symmetry.cell_setting . _symmetry.Int_Tables_number 179 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'P 65 2 2' _symmetry.pdbx_full_space_group_name_H-M . # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein' 12703.837 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 water nat water 18.015 6 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'HYPOTHETICAL PROTEIN PF0907' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AHHHHHHGSGLFDFLKRKEVKEEEKIEILSKKPAGKVVVEEVVNIMGKDVIIGTVESGMIGVGFKVKGPSGIGGIVRIER NREKVEFAIAGDRIGISIEGKIGKVKKGDVLEIYQT ; _entity_poly.pdbx_seq_one_letter_code_can ;AHHHHHHGSGLFDFLKRKEVKEEEKIEILSKKPAGKVVVEEVVNIMGKDVIIGTVESGMIGVGFKVKGPSGIGGIVRIER NREKVEFAIAGDRIGISIEGKIGKVKKGDVLEIYQT ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier SECSG-Pfu-880080-001 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 GLY n 1 9 SER n 1 10 GLY n 1 11 LEU n 1 12 PHE n 1 13 ASP n 1 14 PHE n 1 15 LEU n 1 16 LYS n 1 17 ARG n 1 18 LYS n 1 19 GLU n 1 20 VAL n 1 21 LYS n 1 22 GLU n 1 23 GLU n 1 24 GLU n 1 25 LYS n 1 26 ILE n 1 27 GLU n 1 28 ILE n 1 29 LEU n 1 30 SER n 1 31 LYS n 1 32 LYS n 1 33 PRO n 1 34 ALA n 1 35 GLY n 1 36 LYS n 1 37 VAL n 1 38 VAL n 1 39 VAL n 1 40 GLU n 1 41 GLU n 1 42 VAL n 1 43 VAL n 1 44 ASN n 1 45 ILE n 1 46 MET n 1 47 GLY n 1 48 LYS n 1 49 ASP n 1 50 VAL n 1 51 ILE n 1 52 ILE n 1 53 GLY n 1 54 THR n 1 55 VAL n 1 56 GLU n 1 57 SER n 1 58 GLY n 1 59 MET n 1 60 ILE n 1 61 GLY n 1 62 VAL n 1 63 GLY n 1 64 PHE n 1 65 LYS n 1 66 VAL n 1 67 LYS n 1 68 GLY n 1 69 PRO n 1 70 SER n 1 71 GLY n 1 72 ILE n 1 73 GLY n 1 74 GLY n 1 75 ILE n 1 76 VAL n 1 77 ARG n 1 78 ILE n 1 79 GLU n 1 80 ARG n 1 81 ASN n 1 82 ARG n 1 83 GLU n 1 84 LYS n 1 85 VAL n 1 86 GLU n 1 87 PHE n 1 88 ALA n 1 89 ILE n 1 90 ALA n 1 91 GLY n 1 92 ASP n 1 93 ARG n 1 94 ILE n 1 95 GLY n 1 96 ILE n 1 97 SER n 1 98 ILE n 1 99 GLU n 1 100 GLY n 1 101 LYS n 1 102 ILE n 1 103 GLY n 1 104 LYS n 1 105 VAL n 1 106 LYS n 1 107 LYS n 1 108 GLY n 1 109 ASP n 1 110 VAL n 1 111 LEU n 1 112 GLU n 1 113 ILE n 1 114 TYR n 1 115 GLN n 1 116 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 116 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene PF0907 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 43587 / DSM 3638 / JCM 8422 / Vc1' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrococcus furiosus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 186497 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8U2D2_PYRFU _struct_ref.pdbx_db_accession Q8U2D2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GLFDFLKRKEVKEEEKIEILSKKPAGKVVVEEVVNIMGKDVIIGTVESGMIGVGFKVKGPSGIGGIVRIERNREKVEFAI AGDRIGISIEGKIGKVKKGDVLEIYQT ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4PGO _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 10 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 116 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8U2D2 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 108 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 108 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4PGO ALA A 1 ? UNP Q8U2D2 ? ? 'expression tag' -7 1 1 4PGO HIS A 2 ? UNP Q8U2D2 ? ? 'expression tag' -6 2 1 4PGO HIS A 3 ? UNP Q8U2D2 ? ? 'expression tag' -5 3 1 4PGO HIS A 4 ? UNP Q8U2D2 ? ? 'expression tag' -4 4 1 4PGO HIS A 5 ? UNP Q8U2D2 ? ? 'expression tag' -3 5 1 4PGO HIS A 6 ? UNP Q8U2D2 ? ? 'expression tag' -2 6 1 4PGO HIS A 7 ? UNP Q8U2D2 ? ? 'expression tag' -1 7 1 4PGO GLY A 8 ? UNP Q8U2D2 ? ? 'expression tag' 0 8 1 4PGO SER A 9 ? UNP Q8U2D2 ? ? 'expression tag' 1 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu . _exptl.absorpt_correction_T_max . _exptl.absorpt_correction_T_min . _exptl.absorpt_correction_type . _exptl.absorpt_process_details . _exptl.entry_id 4PGO _exptl.crystals_number 1 _exptl.details . _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details . # _exptl_crystal.colour . _exptl_crystal.density_diffrn . _exptl_crystal.density_Matthews 3.25 _exptl_crystal.density_method . _exptl_crystal.density_percent_sol 62.10 _exptl_crystal.description . _exptl_crystal.F_000 . _exptl_crystal.id 1 _exptl_crystal.preparation . _exptl_crystal.size_max . _exptl_crystal.size_mid . _exptl_crystal.size_min . _exptl_crystal.size_rad . _exptl_crystal.colour_lustre . _exptl_crystal.colour_modifier . _exptl_crystal.colour_primary . _exptl_crystal.density_meas . _exptl_crystal.density_meas_esd . _exptl_crystal.density_meas_gt . _exptl_crystal.density_meas_lt . _exptl_crystal.density_meas_temp . _exptl_crystal.density_meas_temp_esd . _exptl_crystal.density_meas_temp_gt . _exptl_crystal.density_meas_temp_lt . _exptl_crystal.pdbx_crystal_image_url . _exptl_crystal.pdbx_crystal_image_format . _exptl_crystal.pdbx_mosaicity . _exptl_crystal.pdbx_mosaicity_esd . # _exptl_crystal_grow.apparatus . _exptl_crystal_grow.atmosphere . _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details . _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.method_ref . _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pressure . _exptl_crystal_grow.pressure_esd . _exptl_crystal_grow.seeding . _exptl_crystal_grow.seeding_ref . _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details . _exptl_crystal_grow.temp_esd . _exptl_crystal_grow.time . _exptl_crystal_grow.pdbx_details 'MODIFIED MICROBATCH UNDER OIL USING 1.6M MAGNESIUM SULFATE IN 0.1M MES BUFFER, PH 6.5, TEMPERATURE 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment . _diffrn.ambient_temp 100 _diffrn.ambient_temp_details . _diffrn.ambient_temp_esd . _diffrn.crystal_id 1 _diffrn.crystal_support . _diffrn.crystal_treatment . _diffrn.details . _diffrn.id 1 _diffrn.ambient_pressure . _diffrn.ambient_pressure_esd . _diffrn.ambient_pressure_gt . _diffrn.ambient_pressure_lt . _diffrn.ambient_temp_gt . _diffrn.ambient_temp_lt . # _diffrn_detector.details . _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 2M-F' _diffrn_detector.area_resol_mean . _diffrn_detector.dtime . _diffrn_detector.pdbx_frames_total . _diffrn_detector.pdbx_collection_time_total . _diffrn_detector.pdbx_collection_date 2013-08-30 # _diffrn_radiation.collimation . _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge . _diffrn_radiation.inhomogeneity . _diffrn_radiation.monochromator . _diffrn_radiation.polarisn_norm . _diffrn_radiation.polarisn_ratio . _diffrn_radiation.probe . _diffrn_radiation.type . _diffrn_radiation.xray_symbol . _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list . _diffrn_radiation.pdbx_wavelength . _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer . _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 2.066 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current . _diffrn_source.details . _diffrn_source.diffrn_id 1 _diffrn_source.power . _diffrn_source.size . _diffrn_source.source SYNCHROTRON _diffrn_source.target . _diffrn_source.type 'SLS BEAMLINE X06DA' _diffrn_source.voltage . _diffrn_source.take-off_angle . _diffrn_source.pdbx_wavelength_list 2.066 _diffrn_source.pdbx_wavelength . _diffrn_source.pdbx_synchrotron_beamline X06DA _diffrn_source.pdbx_synchrotron_site SLS # _reflns.B_iso_Wilson_estimate . _reflns.entry_id 4PGO _reflns.data_reduction_details . _reflns.data_reduction_method . _reflns.d_resolution_high 2.3 _reflns.d_resolution_low 50.000 _reflns.details . _reflns.limit_h_max . _reflns.limit_h_min . _reflns.limit_k_max . _reflns.limit_k_min . _reflns.limit_l_max . _reflns.limit_l_min . _reflns.number_all 13544 _reflns.number_obs 7558 _reflns.observed_criterion . _reflns.observed_criterion_F_max . _reflns.observed_criterion_F_min . _reflns.observed_criterion_I_max . _reflns.observed_criterion_I_min . _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.percent_possible_obs 94.95 _reflns.R_free_details . _reflns.Rmerge_F_all . _reflns.Rmerge_F_obs . _reflns.Friedel_coverage . _reflns.number_gt . _reflns.threshold_expression . _reflns.pdbx_redundancy 51.16 _reflns.pdbx_Rmerge_I_obs 0.046 _reflns.pdbx_Rmerge_I_all . _reflns.pdbx_Rsym_value . _reflns.pdbx_netI_over_av_sigmaI . _reflns.pdbx_netI_over_sigmaI 69.96 _reflns.pdbx_res_netI_over_av_sigmaI_2 . _reflns.pdbx_res_netI_over_sigmaI_2 . _reflns.pdbx_chi_squared . _reflns.pdbx_scaling_rejects . _reflns.pdbx_d_res_high_opt . _reflns.pdbx_d_res_low_opt . _reflns.pdbx_d_res_opt_method . _reflns.phase_calculation_details . _reflns.pdbx_Rrim_I_all . _reflns.pdbx_Rpim_I_all . _reflns.pdbx_d_opt . _reflns.pdbx_number_measured_all . _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.aniso_B[1][1] . _refine.aniso_B[1][2] . _refine.aniso_B[1][3] . _refine.aniso_B[2][2] . _refine.aniso_B[2][3] . _refine.aniso_B[3][3] . _refine.B_iso_max . _refine.B_iso_mean . _refine.B_iso_min . _refine.correlation_coeff_Fo_to_Fc . _refine.correlation_coeff_Fo_to_Fc_free . _refine.details . _refine.diff_density_max . _refine.diff_density_max_esd . _refine.diff_density_min . _refine.diff_density_min_esd . _refine.diff_density_rms . _refine.diff_density_rms_esd . _refine.entry_id 4PGO _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details . _refine.ls_abs_structure_Flack . _refine.ls_abs_structure_Flack_esd . _refine.ls_abs_structure_Rogers . _refine.ls_abs_structure_Rogers_esd . _refine.ls_d_res_high 2.300 _refine.ls_d_res_low 44.250 _refine.ls_extinction_coef . _refine.ls_extinction_coef_esd . _refine.ls_extinction_expression . _refine.ls_extinction_method . _refine.ls_goodness_of_fit_all . _refine.ls_goodness_of_fit_all_esd . _refine.ls_goodness_of_fit_obs . _refine.ls_goodness_of_fit_obs_esd . _refine.ls_hydrogen_treatment . _refine.ls_matrix_type . _refine.ls_number_constraints . _refine.ls_number_parameters . _refine.ls_number_reflns_all . _refine.ls_number_reflns_obs 7558 _refine.ls_number_reflns_R_free 1330 _refine.ls_number_reflns_R_work . _refine.ls_number_restraints . _refine.ls_percent_reflns_obs 94.94 _refine.ls_percent_reflns_R_free 9.82 _refine.ls_R_factor_all . _refine.ls_R_factor_obs 0.1890 _refine.ls_R_factor_R_free 0.2026 _refine.ls_R_factor_R_free_error . _refine.ls_R_factor_R_free_error_details . _refine.ls_R_factor_R_work 0.1875 _refine.ls_R_Fsqd_factor_obs . _refine.ls_R_I_factor_obs . _refine.ls_redundancy_reflns_all . _refine.ls_redundancy_reflns_obs . _refine.ls_restrained_S_all . _refine.ls_restrained_S_obs . _refine.ls_shift_over_esd_max . _refine.ls_shift_over_esd_mean . _refine.ls_structure_factor_coef . _refine.ls_weighting_details . _refine.ls_weighting_scheme . _refine.ls_wR_factor_all . _refine.ls_wR_factor_obs . _refine.ls_wR_factor_R_free . _refine.ls_wR_factor_R_work . _refine.occupancy_max . _refine.occupancy_min . _refine.overall_SU_B . _refine.overall_SU_ML 0.21 _refine.overall_SU_R_Cruickshank_DPI . _refine.overall_SU_R_free . _refine.overall_FOM_free_R_set . _refine.overall_FOM_work_R_set . _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol . _refine.solvent_model_param_ksol . _refine.ls_R_factor_gt . _refine.ls_goodness_of_fit_gt . _refine.ls_goodness_of_fit_ref . _refine.ls_shift_over_su_max . _refine.ls_shift_over_su_max_lt . _refine.ls_shift_over_su_mean . _refine.ls_shift_over_su_mean_lt . _refine.pdbx_ls_sigma_I . _refine.pdbx_ls_sigma_F 1.53 _refine.pdbx_ls_sigma_Fsqd . _refine.pdbx_data_cutoff_high_absF . _refine.pdbx_data_cutoff_high_rms_absF . _refine.pdbx_data_cutoff_low_absF . _refine.pdbx_isotropic_thermal_model . _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model . _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_R_Free_selection_details . _refine.pdbx_stereochem_target_val_spec_case . _refine.pdbx_overall_ESU_R . _refine.pdbx_overall_ESU_R_Free . _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii . _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R . _refine.pdbx_density_correlation . _refine.pdbx_pd_number_of_powder_patterns . _refine.pdbx_pd_number_of_points . _refine.pdbx_pd_meas_number_of_points . _refine.pdbx_pd_proc_ls_prof_R_factor . _refine.pdbx_pd_proc_ls_prof_wR_factor . _refine.pdbx_pd_Marquardt_correlation_coeff . _refine.pdbx_pd_Fsqrd_R_factor . _refine.pdbx_pd_ls_matrix_band_width . _refine.pdbx_overall_phase_error 20.33 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI . _refine.pdbx_overall_SU_R_free_Blow_DPI . _refine.pdbx_overall_SU_R_Blow_DPI . _refine.pdbx_TLS_residual_ADP_flag . _refine.pdbx_diffrn_id 1 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 635 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 2 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 643 _refine_hist.d_res_high 2.300 _refine_hist.d_res_low 44.250 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' . 0.009 . 639 . f_bond_d . . 'X-RAY DIFFRACTION' . 1.076 . 858 . f_angle_d . . 'X-RAY DIFFRACTION' . 10.862 . 235 . f_dihedral_angle_d . . 'X-RAY DIFFRACTION' . 0.038 . 104 . f_chiral_restr . . 'X-RAY DIFFRACTION' . 0.004 . 110 . f_plane_restr . . # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error 'X-RAY DIFFRACTION' 2.30 2.3918 . . 126 1157 80.00 . . . 0.2811 . 0.2434 . . . . . . . . 'X-RAY DIFFRACTION' 2.3918 2.5007 . . 143 1282 91.00 . . . 0.2144 . 0.2202 . . . . . . . . 'X-RAY DIFFRACTION' 2.5007 2.6325 . . 147 1314 92.00 . . . 0.2701 . 0.2094 . . . . . . . . 'X-RAY DIFFRACTION' 2.6325 2.7974 . . 144 1365 96.00 . . . 0.2474 . 0.2114 . . . . . . . . 'X-RAY DIFFRACTION' 2.7974 3.0133 . . 153 1391 98.00 . . . 0.2296 . 0.1924 . . . . . . . . 'X-RAY DIFFRACTION' 3.0133 3.3165 . . 149 1430 99.00 . . . 0.2327 . 0.1820 . . . . . . . . 'X-RAY DIFFRACTION' 3.3165 3.7962 . . 150 1415 99.00 . . . 0.1993 . 0.1753 . . . . . . . . 'X-RAY DIFFRACTION' 3.7962 4.7819 . . 156 1427 100.00 . . . 0.1707 . 0.1638 . . . . . . . . 'X-RAY DIFFRACTION' 4.7819 44.2582 . . 162 1432 100.00 . . . 0.1950 . 0.2016 . . . . . . . . # _struct.entry_id 4PGO _struct.title 'Crystal structure of hypothetical protein PF0907 from Pyrococcus furiosus solved by sulfur SAD using Swiss Light Source data' _struct.pdbx_descriptor 'HYPOTHETICAL PROTEIN PF0907' _struct.pdbx_model_details . _struct.pdbx_formula_weight . _struct.pdbx_formula_weight_method . _struct.pdbx_model_type_details . _struct.pdbx_CASP_flag . # _struct_keywords.entry_id 4PGO _struct_keywords.text 'Sulfur SAD, SOUTHEAST COLLABORATORY FOR STRUCTURAL GENOMICS, SECSG, STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.pdbx_keywords 'UNKNOWN FUNCTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 7 ? AA2 ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA1 3 4 ? anti-parallel AA1 4 5 ? anti-parallel AA1 5 6 ? anti-parallel AA1 6 7 ? anti-parallel AA2 1 2 ? anti-parallel AA2 2 3 ? anti-parallel AA2 3 4 ? anti-parallel AA2 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLU A 83 ? VAL A 85 ? GLU A 75 VAL A 77 AA1 2 GLY A 71 ? ARG A 80 ? GLY A 63 ARG A 72 AA1 3 LYS A 65 ? GLY A 68 ? LYS A 57 GLY A 60 AA1 4 VAL A 110 ? TYR A 114 ? VAL A 102 TYR A 106 AA1 5 GLY A 35 ? ILE A 45 ? GLY A 27 ILE A 37 AA1 6 LYS A 48 ? GLY A 61 ? LYS A 40 GLY A 53 AA1 7 PHE A 87 ? ILE A 89 ? PHE A 79 ILE A 81 AA2 1 GLU A 83 ? VAL A 85 ? GLU A 75 VAL A 77 AA2 2 GLY A 71 ? ARG A 80 ? GLY A 63 ARG A 72 AA2 3 ARG A 93 ? GLU A 99 ? ARG A 85 GLU A 91 AA2 4 LYS A 48 ? GLY A 61 ? LYS A 40 GLY A 53 AA2 5 PHE A 87 ? ILE A 89 ? PHE A 79 ILE A 81 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLU A 83 ? O GLU A 75 N ARG A 80 ? N ARG A 72 AA1 2 3 O GLY A 73 ? O GLY A 65 N VAL A 66 ? N VAL A 58 AA1 3 4 N LYS A 65 ? N LYS A 57 O TYR A 114 ? O TYR A 106 AA1 4 5 O ILE A 113 ? O ILE A 105 N GLY A 35 ? N GLY A 27 AA1 5 6 N VAL A 43 ? N VAL A 35 O VAL A 50 ? O VAL A 42 AA1 6 7 N ILE A 60 ? N ILE A 52 O ALA A 88 ? O ALA A 80 AA2 1 2 O GLU A 83 ? O GLU A 75 N ARG A 80 ? N ARG A 72 AA2 2 3 N GLU A 79 ? N GLU A 71 O GLY A 95 ? O GLY A 87 AA2 3 4 O ILE A 94 ? O ILE A 86 N GLY A 53 ? N GLY A 45 AA2 4 5 N ILE A 60 ? N ILE A 52 O ALA A 88 ? O ALA A 80 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 201 ? 2 'binding site for residue CL A 201' AC2 Software A CL 202 ? 3 'binding site for residue CL A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ARG A 93 ? ARG A 85 . ? 10_665 ? 2 AC1 2 LYS A 107 ? LYS A 99 . ? 1_555 ? 3 AC2 3 GLU A 56 ? GLU A 48 . ? 1_555 ? 4 AC2 3 GLY A 108 ? GLY A 100 . ? 10_665 ? 5 AC2 3 VAL A 110 ? VAL A 102 . ? 10_665 ? # _atom_sites.entry_id 4PGO _atom_sites.fract_transf_matrix[1][1] 0.011299 _atom_sites.fract_transf_matrix[1][2] 0.006524 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013047 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013676 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 -7 ? ? ? A . n A 1 2 HIS 2 -6 ? ? ? A . n A 1 3 HIS 3 -5 ? ? ? A . n A 1 4 HIS 4 -4 ? ? ? A . n A 1 5 HIS 5 -3 ? ? ? A . n A 1 6 HIS 6 -2 ? ? ? A . n A 1 7 HIS 7 -1 ? ? ? A . n A 1 8 GLY 8 0 ? ? ? A . n A 1 9 SER 9 1 ? ? ? A . n A 1 10 GLY 10 2 ? ? ? A . n A 1 11 LEU 11 3 ? ? ? A . n A 1 12 PHE 12 4 ? ? ? A . n A 1 13 ASP 13 5 ? ? ? A . n A 1 14 PHE 14 6 ? ? ? A . n A 1 15 LEU 15 7 ? ? ? A . n A 1 16 LYS 16 8 ? ? ? A . n A 1 17 ARG 17 9 ? ? ? A . n A 1 18 LYS 18 10 ? ? ? A . n A 1 19 GLU 19 11 ? ? ? A . n A 1 20 VAL 20 12 ? ? ? A . n A 1 21 LYS 21 13 ? ? ? A . n A 1 22 GLU 22 14 ? ? ? A . n A 1 23 GLU 23 15 ? ? ? A . n A 1 24 GLU 24 16 ? ? ? A . n A 1 25 LYS 25 17 ? ? ? A . n A 1 26 ILE 26 18 ? ? ? A . n A 1 27 GLU 27 19 19 GLU GLU A . n A 1 28 ILE 28 20 20 ILE ILE A . n A 1 29 LEU 29 21 21 LEU LEU A . n A 1 30 SER 30 22 22 SER SER A . n A 1 31 LYS 31 23 23 LYS LYS A . n A 1 32 LYS 32 24 24 LYS LYS A . n A 1 33 PRO 33 25 25 PRO PRO A . n A 1 34 ALA 34 26 26 ALA ALA A . n A 1 35 GLY 35 27 27 GLY GLY A . n A 1 36 LYS 36 28 28 LYS LYS A . n A 1 37 VAL 37 29 29 VAL VAL A . n A 1 38 VAL 38 30 30 VAL VAL A . n A 1 39 VAL 39 31 31 VAL VAL A . n A 1 40 GLU 40 32 32 GLU GLU A . n A 1 41 GLU 41 33 33 GLU GLU A . n A 1 42 VAL 42 34 34 VAL VAL A . n A 1 43 VAL 43 35 35 VAL VAL A . n A 1 44 ASN 44 36 36 ASN ASN A . n A 1 45 ILE 45 37 37 ILE ILE A . n A 1 46 MET 46 38 38 MET MET A . n A 1 47 GLY 47 39 39 GLY GLY A . n A 1 48 LYS 48 40 40 LYS LYS A . n A 1 49 ASP 49 41 41 ASP ASP A . n A 1 50 VAL 50 42 42 VAL VAL A . n A 1 51 ILE 51 43 43 ILE ILE A . n A 1 52 ILE 52 44 44 ILE ILE A . n A 1 53 GLY 53 45 45 GLY GLY A . n A 1 54 THR 54 46 46 THR THR A . n A 1 55 VAL 55 47 47 VAL VAL A . n A 1 56 GLU 56 48 48 GLU GLU A . n A 1 57 SER 57 49 49 SER SER A . n A 1 58 GLY 58 50 50 GLY GLY A . n A 1 59 MET 59 51 51 MET MET A . n A 1 60 ILE 60 52 52 ILE ILE A . n A 1 61 GLY 61 53 53 GLY GLY A . n A 1 62 VAL 62 54 54 VAL VAL A . n A 1 63 GLY 63 55 55 GLY GLY A . n A 1 64 PHE 64 56 56 PHE PHE A . n A 1 65 LYS 65 57 57 LYS LYS A . n A 1 66 VAL 66 58 58 VAL VAL A . n A 1 67 LYS 67 59 59 LYS LYS A . n A 1 68 GLY 68 60 60 GLY GLY A . n A 1 69 PRO 69 61 61 PRO PRO A . n A 1 70 SER 70 62 62 SER SER A . n A 1 71 GLY 71 63 63 GLY GLY A . n A 1 72 ILE 72 64 64 ILE ILE A . n A 1 73 GLY 73 65 65 GLY GLY A . n A 1 74 GLY 74 66 66 GLY GLY A . n A 1 75 ILE 75 67 67 ILE ILE A . n A 1 76 VAL 76 68 68 VAL VAL A . n A 1 77 ARG 77 69 69 ARG ARG A . n A 1 78 ILE 78 70 70 ILE ILE A . n A 1 79 GLU 79 71 71 GLU GLU A . n A 1 80 ARG 80 72 72 ARG ARG A . n A 1 81 ASN 81 73 73 ASN ASN A . n A 1 82 ARG 82 74 74 ARG ARG A . n A 1 83 GLU 83 75 75 GLU GLU A . n A 1 84 LYS 84 76 76 LYS LYS A . n A 1 85 VAL 85 77 77 VAL VAL A . n A 1 86 GLU 86 78 78 GLU GLU A . n A 1 87 PHE 87 79 79 PHE PHE A . n A 1 88 ALA 88 80 80 ALA ALA A . n A 1 89 ILE 89 81 81 ILE ILE A . n A 1 90 ALA 90 82 82 ALA ALA A . n A 1 91 GLY 91 83 83 GLY GLY A . n A 1 92 ASP 92 84 84 ASP ASP A . n A 1 93 ARG 93 85 85 ARG ARG A . n A 1 94 ILE 94 86 86 ILE ILE A . n A 1 95 GLY 95 87 87 GLY GLY A . n A 1 96 ILE 96 88 88 ILE ILE A . n A 1 97 SER 97 89 89 SER SER A . n A 1 98 ILE 98 90 90 ILE ILE A . n A 1 99 GLU 99 91 91 GLU GLU A . n A 1 100 GLY 100 92 92 GLY GLY A . n A 1 101 LYS 101 93 93 LYS LYS A . n A 1 102 ILE 102 94 94 ILE ILE A . n A 1 103 GLY 103 95 95 GLY GLY A . n A 1 104 LYS 104 96 96 LYS LYS A . n A 1 105 VAL 105 97 97 VAL VAL A . n A 1 106 LYS 106 98 98 LYS LYS A . n A 1 107 LYS 107 99 99 LYS LYS A . n A 1 108 GLY 108 100 100 GLY GLY A . n A 1 109 ASP 109 101 101 ASP ASP A . n A 1 110 VAL 110 102 102 VAL VAL A . n A 1 111 LEU 111 103 103 LEU LEU A . n A 1 112 GLU 112 104 104 GLU GLU A . n A 1 113 ILE 113 105 105 ILE ILE A . n A 1 114 TYR 114 106 106 TYR TYR A . n A 1 115 GLN 115 107 107 GLN GLN A . n A 1 116 THR 116 108 108 THR THR A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Southeast Collaboratory for Structural Genomics' _pdbx_SG_project.initial_of_center SECSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 201 1 CL CL A . C 2 CL 1 202 2 CL CL A . D 3 HOH 1 301 1 HOH HOH A . D 3 HOH 2 302 5 HOH HOH A . D 3 HOH 3 303 2 HOH HOH A . D 3 HOH 4 304 3 HOH HOH A . D 3 HOH 5 305 6 HOH HOH A . D 3 HOH 6 306 7 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-12-10 2 'Structure model' 1 1 2015-08-12 3 'Structure model' 1 2 2017-11-22 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' pdbx_struct_oper_list 2 3 'Structure model' software # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 3 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_pdbx_struct_oper_list.symmetry_operation' # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' . refined 75.2420 20.6931 2.4499 0.5356 . -0.0455 . -0.0259 . 0.7206 . -0.0151 . 0.4983 . 0.0132 . -0.0685 . -0.0397 . 0.2862 . 0.1918 . 0.1178 . -0.2130 . -0.1137 . -0.1093 . 0.0024 . 0.1551 . -0.2274 . 0.0117 . 0.1903 . -0.0001 . 2 'X-RAY DIFFRACTION' . refined 58.2659 25.9657 -7.0307 0.6234 . -0.0097 . -0.0187 . 0.5951 . 0.0769 . 0.6296 . 0.3788 . -0.4098 . 0.1848 . 0.4132 . -0.1970 . 0.0795 . 0.0918 . 0.3900 . -0.0057 . 0.0854 . 0.6441 . -0.5734 . 0.6263 . -0.1762 . 0.0010 . 3 'X-RAY DIFFRACTION' . refined 65.3007 23.1316 3.2345 0.5518 . -0.0630 . -0.0247 . 0.5523 . 0.0197 . 0.5142 . 0.9394 . -0.6255 . -0.8531 . 0.4416 . 0.5103 . 0.7849 . 0.2836 . 0.1241 . 0.1508 . -0.4791 . 0.2990 . -0.6114 . 0.2897 . 0.5227 . 0.0000 . 4 'X-RAY DIFFRACTION' . refined 67.4957 28.6919 1.8138 0.6573 . -0.1557 . -0.1057 . 0.5065 . -0.0065 . 0.5902 . 0.8408 . -0.2936 . 0.8334 . 0.4945 . 0.2780 . 1.5310 . -0.2973 . 0.4722 . 0.6131 . -0.4394 . 0.3022 . 0.3190 . -0.3195 . -0.1993 . 0.0011 . 5 'X-RAY DIFFRACTION' . refined 67.5812 23.0604 1.4237 0.5690 . -0.0603 . -0.0339 . 0.5738 . -0.0871 . 0.5748 . 0.9962 . 1.0894 . -0.1452 . 1.2051 . -0.0412 . 0.2673 . -0.2338 . 0.0602 . 0.0454 . -0.2518 . 0.1265 . -0.2037 . -0.2176 . 0.3966 . -0.0002 . # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 . . . . . . . . . ;chain 'A' and (resid 19 through 31 ) ; 2 'X-RAY DIFFRACTION' 2 . . . . . . . . . ;chain 'A' and (resid 32 through 39 ) ; 3 'X-RAY DIFFRACTION' 3 . . . . . . . . . ;chain 'A' and (resid 40 through 53 ) ; 4 'X-RAY DIFFRACTION' 4 . . . . . . . . . ;chain 'A' and (resid 54 through 77 ) ; 5 'X-RAY DIFFRACTION' 5 . . . . . . . . . ;chain 'A' and (resid 78 through 108 ) ; # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' . . . . . . . . . . . XDS . . . . 1 ? phasing . . . . . . . . . . . SHELXDE . . . . 2 ? 'model building' . . . . . . . . . . . Coot . . . . 3 ? refinement . . . . . . . . . . . PHENIX . . . '(phenix.refine: 1.8.4_1496)' 4 ? 'model building' ? ? ? ? ? ? ? ? ? ? ? SHELX ? ? ? . 5 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 6 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELX ? ? ? . 7 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 62 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -144.59 _pdbx_validate_torsion.psi 25.96 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 19 ? CG ? A GLU 27 CG 2 1 Y 1 A GLU 19 ? CD ? A GLU 27 CD 3 1 Y 1 A GLU 19 ? OE1 ? A GLU 27 OE1 4 1 Y 1 A GLU 19 ? OE2 ? A GLU 27 OE2 5 1 Y 1 A LYS 23 ? CB ? A LYS 31 CB 6 1 Y 1 A LYS 23 ? CG ? A LYS 31 CG 7 1 Y 1 A LYS 23 ? CD ? A LYS 31 CD 8 1 Y 1 A LYS 23 ? CE ? A LYS 31 CE 9 1 Y 1 A LYS 23 ? NZ ? A LYS 31 NZ 10 1 Y 1 A LYS 24 ? CD ? A LYS 32 CD 11 1 Y 1 A LYS 24 ? CE ? A LYS 32 CE 12 1 Y 1 A LYS 24 ? NZ ? A LYS 32 NZ 13 1 Y 1 A LYS 40 ? NZ ? A LYS 48 NZ 14 1 Y 1 A ARG 74 ? CG ? A ARG 82 CG 15 1 Y 1 A ARG 74 ? CD ? A ARG 82 CD 16 1 Y 1 A ARG 74 ? NE ? A ARG 82 NE 17 1 Y 1 A ARG 74 ? CZ ? A ARG 82 CZ 18 1 Y 1 A ARG 74 ? NH1 ? A ARG 82 NH1 19 1 Y 1 A ARG 74 ? NH2 ? A ARG 82 NH2 20 1 Y 1 A GLU 75 ? CD ? A GLU 83 CD 21 1 Y 1 A GLU 75 ? OE1 ? A GLU 83 OE1 22 1 Y 1 A GLU 75 ? OE2 ? A GLU 83 OE2 23 1 Y 1 A GLU 91 ? CB ? A GLU 99 CB 24 1 Y 1 A GLU 91 ? CG ? A GLU 99 CG 25 1 Y 1 A GLU 91 ? CD ? A GLU 99 CD 26 1 Y 1 A GLU 91 ? OE1 ? A GLU 99 OE1 27 1 Y 1 A GLU 91 ? OE2 ? A GLU 99 OE2 28 1 Y 1 A LYS 93 ? CG ? A LYS 101 CG 29 1 Y 1 A LYS 93 ? CD ? A LYS 101 CD 30 1 Y 1 A LYS 93 ? CE ? A LYS 101 CE 31 1 Y 1 A LYS 93 ? NZ ? A LYS 101 NZ 32 1 Y 1 A LYS 96 ? CG ? A LYS 104 CG 33 1 Y 1 A LYS 96 ? CD ? A LYS 104 CD 34 1 Y 1 A LYS 96 ? CE ? A LYS 104 CE 35 1 Y 1 A LYS 96 ? NZ ? A LYS 104 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA -7 ? A ALA 1 2 1 Y 1 A HIS -6 ? A HIS 2 3 1 Y 1 A HIS -5 ? A HIS 3 4 1 Y 1 A HIS -4 ? A HIS 4 5 1 Y 1 A HIS -3 ? A HIS 5 6 1 Y 1 A HIS -2 ? A HIS 6 7 1 Y 1 A HIS -1 ? A HIS 7 8 1 Y 1 A GLY 0 ? A GLY 8 9 1 Y 1 A SER 1 ? A SER 9 10 1 Y 1 A GLY 2 ? A GLY 10 11 1 Y 1 A LEU 3 ? A LEU 11 12 1 Y 1 A PHE 4 ? A PHE 12 13 1 Y 1 A ASP 5 ? A ASP 13 14 1 Y 1 A PHE 6 ? A PHE 14 15 1 Y 1 A LEU 7 ? A LEU 15 16 1 Y 1 A LYS 8 ? A LYS 16 17 1 Y 1 A ARG 9 ? A ARG 17 18 1 Y 1 A LYS 10 ? A LYS 18 19 1 Y 1 A GLU 11 ? A GLU 19 20 1 Y 1 A VAL 12 ? A VAL 20 21 1 Y 1 A LYS 13 ? A LYS 21 22 1 Y 1 A GLU 14 ? A GLU 22 23 1 Y 1 A GLU 15 ? A GLU 23 24 1 Y 1 A GLU 16 ? A GLU 24 25 1 Y 1 A LYS 17 ? A LYS 25 26 1 Y 1 A ILE 18 ? A ILE 26 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 water HOH #