data_4PGW # _entry.id 4PGW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4PGW pdb_00004pgw 10.2210/pdb4pgw/pdb WWPDB D_1000201261 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-04 2 'Structure model' 1 1 2014-06-18 3 'Structure model' 1 2 2017-09-20 4 'Structure model' 1 3 2019-12-25 5 'Structure model' 1 4 2023-12-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Author supporting evidence' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other 6 3 'Structure model' 'Source and taxonomy' 7 4 'Structure model' 'Author supporting evidence' 8 5 'Structure model' 'Data collection' 9 5 'Structure model' 'Database references' 10 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' entity_src_gen 3 3 'Structure model' pdbx_audit_support 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' pdbx_struct_assembly 6 3 'Structure model' pdbx_struct_oper_list 7 4 'Structure model' pdbx_audit_support 8 5 'Structure model' chem_comp_atom 9 5 'Structure model' chem_comp_bond 10 5 'Structure model' database_2 11 5 'Structure model' refine_hist # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_id_CSD' 2 3 'Structure model' '_entity_src_gen.pdbx_alt_source_flag' 3 3 'Structure model' '_pdbx_audit_support.funding_organization' 4 3 'Structure model' '_pdbx_database_status.pdb_format_compatible' 5 3 'Structure model' '_pdbx_struct_assembly.oligomeric_details' 6 3 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 7 4 'Structure model' '_pdbx_audit_support.funding_organization' 8 5 'Structure model' '_database_2.pdbx_DOI' 9 5 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr . _pdbx_database_status.entry_id 4PGW _pdbx_database_status.recvd_initial_deposition_date 2014-05-02 _pdbx_database_status.SG_entry Y _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs . _pdbx_database_status.methods_development_category . _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 4PGR unspecified PDB . 4PGV unspecified PDB . 4PGS unspecified PDB . 4PGU unspecified TargetTrack . NYCOMPS-GO.6 unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liu, Q.' 1 'Chang, Y.' 2 'Hendrickson, W.A.' 3 'New York Consortium on Membrane Protein Structure (NYCOMPS)' 4 # _citation.abstract . _citation.abstract_id_CAS . _citation.book_id_ISBN . _citation.book_publisher ? _citation.book_publisher_city . _citation.book_title . _citation.coordinate_linkage . _citation.country US _citation.database_id_Medline . _citation.details . _citation.id primary _citation.journal_abbrev Science _citation.journal_id_ASTM SCIEAS _citation.journal_id_CSD 0038 _citation.journal_id_ISSN 1095-9203 _citation.journal_full . _citation.journal_issue . _citation.journal_volume 344 _citation.language . _citation.page_first 1131 _citation.page_last 1135 _citation.title 'Structural basis for a pH-sensitive calcium leak across membranes.' _citation.year 2014 _citation.database_id_CSD . _citation.pdbx_database_id_DOI 10.1126/science.1252043 _citation.pdbx_database_id_PubMed 24904158 _citation.unpublished_flag . # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chang, Y.' 1 ? primary 'Bruni, R.' 2 ? primary 'Kloss, B.' 3 ? primary 'Assur, Z.' 4 ? primary 'Kloppmann, E.' 5 ? primary 'Rost, B.' 6 ? primary 'Hendrickson, W.A.' 7 ? primary 'Liu, Q.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Uncharacterized protein YetJ' 23586.174 1 ? ? ? ? 2 non-polymer syn 'PLATINUM (II) ION' 195.078 3 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNAHESKQSIMQRILTVFVFTLLIATVGLFIGQFVPVALMLPLSILEVAMIILAFWMRRRKAVGYAFVYTFAFVSGITLF PIVSHYASIAGAYVVLEAFGSTFVIFAVLGTIGAKMKKDLSFLWSFLLVAVLALAVVGIFNIFSPLNSAAMMAYSVIGTI VFSLYILYDLNQIKHRHITEDLIPVMALSLYLDFINLFINLLRFFGILSSDD ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAHESKQSIMQRILTVFVFTLLIATVGLFIGQFVPVALMLPLSILEVAMIILAFWMRRRKAVGYAFVYTFAFVSGITLF PIVSHYASIAGAYVVLEAFGSTFVIFAVLGTIGAKMKKDLSFLWSFLLVAVLALAVVGIFNIFSPLNSAAMMAYSVIGTI VFSLYILYDLNQIKHRHITEDLIPVMALSLYLDFINLFINLLRFFGILSSDD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYCOMPS-GO.6 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name 'PLATINUM (II) ION' _pdbx_entity_nonpoly.comp_id PT # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 HIS n 1 5 GLU n 1 6 SER n 1 7 LYS n 1 8 GLN n 1 9 SER n 1 10 ILE n 1 11 MET n 1 12 GLN n 1 13 ARG n 1 14 ILE n 1 15 LEU n 1 16 THR n 1 17 VAL n 1 18 PHE n 1 19 VAL n 1 20 PHE n 1 21 THR n 1 22 LEU n 1 23 LEU n 1 24 ILE n 1 25 ALA n 1 26 THR n 1 27 VAL n 1 28 GLY n 1 29 LEU n 1 30 PHE n 1 31 ILE n 1 32 GLY n 1 33 GLN n 1 34 PHE n 1 35 VAL n 1 36 PRO n 1 37 VAL n 1 38 ALA n 1 39 LEU n 1 40 MET n 1 41 LEU n 1 42 PRO n 1 43 LEU n 1 44 SER n 1 45 ILE n 1 46 LEU n 1 47 GLU n 1 48 VAL n 1 49 ALA n 1 50 MET n 1 51 ILE n 1 52 ILE n 1 53 LEU n 1 54 ALA n 1 55 PHE n 1 56 TRP n 1 57 MET n 1 58 ARG n 1 59 ARG n 1 60 ARG n 1 61 LYS n 1 62 ALA n 1 63 VAL n 1 64 GLY n 1 65 TYR n 1 66 ALA n 1 67 PHE n 1 68 VAL n 1 69 TYR n 1 70 THR n 1 71 PHE n 1 72 ALA n 1 73 PHE n 1 74 VAL n 1 75 SER n 1 76 GLY n 1 77 ILE n 1 78 THR n 1 79 LEU n 1 80 PHE n 1 81 PRO n 1 82 ILE n 1 83 VAL n 1 84 SER n 1 85 HIS n 1 86 TYR n 1 87 ALA n 1 88 SER n 1 89 ILE n 1 90 ALA n 1 91 GLY n 1 92 ALA n 1 93 TYR n 1 94 VAL n 1 95 VAL n 1 96 LEU n 1 97 GLU n 1 98 ALA n 1 99 PHE n 1 100 GLY n 1 101 SER n 1 102 THR n 1 103 PHE n 1 104 VAL n 1 105 ILE n 1 106 PHE n 1 107 ALA n 1 108 VAL n 1 109 LEU n 1 110 GLY n 1 111 THR n 1 112 ILE n 1 113 GLY n 1 114 ALA n 1 115 LYS n 1 116 MET n 1 117 LYS n 1 118 LYS n 1 119 ASP n 1 120 LEU n 1 121 SER n 1 122 PHE n 1 123 LEU n 1 124 TRP n 1 125 SER n 1 126 PHE n 1 127 LEU n 1 128 LEU n 1 129 VAL n 1 130 ALA n 1 131 VAL n 1 132 LEU n 1 133 ALA n 1 134 LEU n 1 135 ALA n 1 136 VAL n 1 137 VAL n 1 138 GLY n 1 139 ILE n 1 140 PHE n 1 141 ASN n 1 142 ILE n 1 143 PHE n 1 144 SER n 1 145 PRO n 1 146 LEU n 1 147 ASN n 1 148 SER n 1 149 ALA n 1 150 ALA n 1 151 MET n 1 152 MET n 1 153 ALA n 1 154 TYR n 1 155 SER n 1 156 VAL n 1 157 ILE n 1 158 GLY n 1 159 THR n 1 160 ILE n 1 161 VAL n 1 162 PHE n 1 163 SER n 1 164 LEU n 1 165 TYR n 1 166 ILE n 1 167 LEU n 1 168 TYR n 1 169 ASP n 1 170 LEU n 1 171 ASN n 1 172 GLN n 1 173 ILE n 1 174 LYS n 1 175 HIS n 1 176 ARG n 1 177 HIS n 1 178 ILE n 1 179 THR n 1 180 GLU n 1 181 ASP n 1 182 LEU n 1 183 ILE n 1 184 PRO n 1 185 VAL n 1 186 MET n 1 187 ALA n 1 188 LEU n 1 189 SER n 1 190 LEU n 1 191 TYR n 1 192 LEU n 1 193 ASP n 1 194 PHE n 1 195 ILE n 1 196 ASN n 1 197 LEU n 1 198 PHE n 1 199 ILE n 1 200 ASN n 1 201 LEU n 1 202 LEU n 1 203 ARG n 1 204 PHE n 1 205 PHE n 1 206 GLY n 1 207 ILE n 1 208 LEU n 1 209 SER n 1 210 SER n 1 211 ASP n 1 212 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 212 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'yetJ, BSU07200' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 168 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus subtilis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224308 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 866768 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21-Gold(DE3)pLysS AG' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PT non-polymer . 'PLATINUM (II) ION' ? 'Pt 2' 195.078 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 3 ? ? ? A . n A 1 2 ASN 2 4 ? ? ? A . n A 1 3 ALA 3 5 ? ? ? A . n A 1 4 HIS 4 6 ? ? ? A . n A 1 5 GLU 5 7 ? ? ? A . n A 1 6 SER 6 8 ? ? ? A . n A 1 7 LYS 7 9 ? ? ? A . n A 1 8 GLN 8 10 ? ? ? A . n A 1 9 SER 9 11 11 SER SER A . n A 1 10 ILE 10 12 12 ILE ILE A . n A 1 11 MET 11 13 13 MET MET A . n A 1 12 GLN 12 14 14 GLN GLN A . n A 1 13 ARG 13 15 15 ARG ARG A . n A 1 14 ILE 14 16 16 ILE ILE A . n A 1 15 LEU 15 17 17 LEU LEU A . n A 1 16 THR 16 18 18 THR THR A . n A 1 17 VAL 17 19 19 VAL VAL A . n A 1 18 PHE 18 20 20 PHE PHE A . n A 1 19 VAL 19 21 21 VAL VAL A . n A 1 20 PHE 20 22 22 PHE PHE A . n A 1 21 THR 21 23 23 THR THR A . n A 1 22 LEU 22 24 24 LEU LEU A . n A 1 23 LEU 23 25 25 LEU LEU A . n A 1 24 ILE 24 26 26 ILE ILE A . n A 1 25 ALA 25 27 27 ALA ALA A . n A 1 26 THR 26 28 28 THR THR A . n A 1 27 VAL 27 29 29 VAL VAL A . n A 1 28 GLY 28 30 30 GLY GLY A . n A 1 29 LEU 29 31 31 LEU LEU A . n A 1 30 PHE 30 32 32 PHE PHE A . n A 1 31 ILE 31 33 33 ILE ILE A . n A 1 32 GLY 32 34 34 GLY GLY A . n A 1 33 GLN 33 35 35 GLN GLN A . n A 1 34 PHE 34 36 36 PHE PHE A . n A 1 35 VAL 35 37 37 VAL VAL A . n A 1 36 PRO 36 38 38 PRO PRO A . n A 1 37 VAL 37 39 39 VAL VAL A . n A 1 38 ALA 38 40 40 ALA ALA A . n A 1 39 LEU 39 41 41 LEU LEU A . n A 1 40 MET 40 42 42 MET MET A . n A 1 41 LEU 41 43 43 LEU LEU A . n A 1 42 PRO 42 44 44 PRO PRO A . n A 1 43 LEU 43 45 45 LEU LEU A . n A 1 44 SER 44 46 46 SER SER A . n A 1 45 ILE 45 47 47 ILE ILE A . n A 1 46 LEU 46 48 48 LEU LEU A . n A 1 47 GLU 47 49 49 GLU GLU A . n A 1 48 VAL 48 50 50 VAL VAL A . n A 1 49 ALA 49 51 51 ALA ALA A . n A 1 50 MET 50 52 52 MET MET A . n A 1 51 ILE 51 53 53 ILE ILE A . n A 1 52 ILE 52 54 54 ILE ILE A . n A 1 53 LEU 53 55 55 LEU LEU A . n A 1 54 ALA 54 56 56 ALA ALA A . n A 1 55 PHE 55 57 57 PHE PHE A . n A 1 56 TRP 56 58 58 TRP TRP A . n A 1 57 MET 57 59 ? ? ? A . n A 1 58 ARG 58 60 ? ? ? A . n A 1 59 ARG 59 61 ? ? ? A . n A 1 60 ARG 60 62 ? ? ? A . n A 1 61 LYS 61 63 ? ? ? A . n A 1 62 ALA 62 64 64 ALA ALA A . n A 1 63 VAL 63 65 65 VAL VAL A . n A 1 64 GLY 64 66 66 GLY GLY A . n A 1 65 TYR 65 67 67 TYR TYR A . n A 1 66 ALA 66 68 68 ALA ALA A . n A 1 67 PHE 67 69 69 PHE PHE A . n A 1 68 VAL 68 70 70 VAL VAL A . n A 1 69 TYR 69 71 71 TYR TYR A . n A 1 70 THR 70 72 72 THR THR A . n A 1 71 PHE 71 73 73 PHE PHE A . n A 1 72 ALA 72 74 74 ALA ALA A . n A 1 73 PHE 73 75 75 PHE PHE A . n A 1 74 VAL 74 76 76 VAL VAL A . n A 1 75 SER 75 77 77 SER SER A . n A 1 76 GLY 76 78 78 GLY GLY A . n A 1 77 ILE 77 79 79 ILE ILE A . n A 1 78 THR 78 80 80 THR THR A . n A 1 79 LEU 79 81 81 LEU LEU A . n A 1 80 PHE 80 82 82 PHE PHE A . n A 1 81 PRO 81 83 83 PRO PRO A . n A 1 82 ILE 82 84 84 ILE ILE A . n A 1 83 VAL 83 85 85 VAL VAL A . n A 1 84 SER 84 86 86 SER SER A . n A 1 85 HIS 85 87 87 HIS HIS A . n A 1 86 TYR 86 88 88 TYR TYR A . n A 1 87 ALA 87 89 89 ALA ALA A . n A 1 88 SER 88 90 90 SER SER A . n A 1 89 ILE 89 91 91 ILE ILE A . n A 1 90 ALA 90 92 92 ALA ALA A . n A 1 91 GLY 91 93 93 GLY GLY A . n A 1 92 ALA 92 94 94 ALA ALA A . n A 1 93 TYR 93 95 95 TYR TYR A . n A 1 94 VAL 94 96 96 VAL VAL A . n A 1 95 VAL 95 97 97 VAL VAL A . n A 1 96 LEU 96 98 98 LEU LEU A . n A 1 97 GLU 97 99 99 GLU GLU A . n A 1 98 ALA 98 100 100 ALA ALA A . n A 1 99 PHE 99 101 101 PHE PHE A . n A 1 100 GLY 100 102 102 GLY GLY A . n A 1 101 SER 101 103 103 SER SER A . n A 1 102 THR 102 104 104 THR THR A . n A 1 103 PHE 103 105 105 PHE PHE A . n A 1 104 VAL 104 106 106 VAL VAL A . n A 1 105 ILE 105 107 107 ILE ILE A . n A 1 106 PHE 106 108 108 PHE PHE A . n A 1 107 ALA 107 109 109 ALA ALA A . n A 1 108 VAL 108 110 110 VAL VAL A . n A 1 109 LEU 109 111 111 LEU LEU A . n A 1 110 GLY 110 112 112 GLY GLY A . n A 1 111 THR 111 113 113 THR THR A . n A 1 112 ILE 112 114 114 ILE ILE A . n A 1 113 GLY 113 115 115 GLY GLY A . n A 1 114 ALA 114 116 116 ALA ALA A . n A 1 115 LYS 115 117 117 LYS LYS A . n A 1 116 MET 116 118 118 MET MET A . n A 1 117 LYS 117 119 119 LYS LYS A . n A 1 118 LYS 118 120 120 LYS LYS A . n A 1 119 ASP 119 121 121 ASP ASP A . n A 1 120 LEU 120 122 122 LEU LEU A . n A 1 121 SER 121 123 123 SER SER A . n A 1 122 PHE 122 124 124 PHE PHE A . n A 1 123 LEU 123 125 125 LEU LEU A . n A 1 124 TRP 124 126 126 TRP TRP A . n A 1 125 SER 125 127 127 SER SER A . n A 1 126 PHE 126 128 128 PHE PHE A . n A 1 127 LEU 127 129 129 LEU LEU A . n A 1 128 LEU 128 130 130 LEU LEU A . n A 1 129 VAL 129 131 131 VAL VAL A . n A 1 130 ALA 130 132 132 ALA ALA A . n A 1 131 VAL 131 133 133 VAL VAL A . n A 1 132 LEU 132 134 134 LEU LEU A . n A 1 133 ALA 133 135 135 ALA ALA A . n A 1 134 LEU 134 136 136 LEU LEU A . n A 1 135 ALA 135 137 137 ALA ALA A . n A 1 136 VAL 136 138 138 VAL VAL A . n A 1 137 VAL 137 139 139 VAL VAL A . n A 1 138 GLY 138 140 140 GLY GLY A . n A 1 139 ILE 139 141 141 ILE ILE A . n A 1 140 PHE 140 142 142 PHE PHE A . n A 1 141 ASN 141 143 143 ASN ASN A . n A 1 142 ILE 142 144 144 ILE ILE A . n A 1 143 PHE 143 145 145 PHE PHE A . n A 1 144 SER 144 146 146 SER SER A . n A 1 145 PRO 145 147 147 PRO PRO A . n A 1 146 LEU 146 148 148 LEU LEU A . n A 1 147 ASN 147 149 149 ASN ASN A . n A 1 148 SER 148 150 150 SER SER A . n A 1 149 ALA 149 151 151 ALA ALA A . n A 1 150 ALA 150 152 152 ALA ALA A . n A 1 151 MET 151 153 153 MET MET A . n A 1 152 MET 152 154 154 MET MET A . n A 1 153 ALA 153 155 155 ALA ALA A . n A 1 154 TYR 154 156 156 TYR TYR A . n A 1 155 SER 155 157 157 SER SER A . n A 1 156 VAL 156 158 158 VAL VAL A . n A 1 157 ILE 157 159 159 ILE ILE A . n A 1 158 GLY 158 160 160 GLY GLY A . n A 1 159 THR 159 161 161 THR THR A . n A 1 160 ILE 160 162 162 ILE ILE A . n A 1 161 VAL 161 163 163 VAL VAL A . n A 1 162 PHE 162 164 164 PHE PHE A . n A 1 163 SER 163 165 165 SER SER A . n A 1 164 LEU 164 166 166 LEU LEU A . n A 1 165 TYR 165 167 167 TYR TYR A . n A 1 166 ILE 166 168 168 ILE ILE A . n A 1 167 LEU 167 169 169 LEU LEU A . n A 1 168 TYR 168 170 170 TYR TYR A . n A 1 169 ASP 169 171 171 ASP ASP A . n A 1 170 LEU 170 172 172 LEU LEU A . n A 1 171 ASN 171 173 173 ASN ASN A . n A 1 172 GLN 172 174 174 GLN GLN A . n A 1 173 ILE 173 175 175 ILE ILE A . n A 1 174 LYS 174 176 176 LYS LYS A . n A 1 175 HIS 175 177 177 HIS HIS A . n A 1 176 ARG 176 178 178 ARG ARG A . n A 1 177 HIS 177 179 179 HIS HIS A . n A 1 178 ILE 178 180 180 ILE ILE A . n A 1 179 THR 179 181 181 THR THR A . n A 1 180 GLU 180 182 182 GLU GLU A . n A 1 181 ASP 181 183 183 ASP ASP A . n A 1 182 LEU 182 184 184 LEU LEU A . n A 1 183 ILE 183 185 185 ILE ILE A . n A 1 184 PRO 184 186 186 PRO PRO A . n A 1 185 VAL 185 187 187 VAL VAL A . n A 1 186 MET 186 188 188 MET MET A . n A 1 187 ALA 187 189 189 ALA ALA A . n A 1 188 LEU 188 190 190 LEU LEU A . n A 1 189 SER 189 191 191 SER SER A . n A 1 190 LEU 190 192 192 LEU LEU A . n A 1 191 TYR 191 193 193 TYR TYR A . n A 1 192 LEU 192 194 194 LEU LEU A . n A 1 193 ASP 193 195 195 ASP ASP A . n A 1 194 PHE 194 196 196 PHE PHE A . n A 1 195 ILE 195 197 197 ILE ILE A . n A 1 196 ASN 196 198 198 ASN ASN A . n A 1 197 LEU 197 199 199 LEU LEU A . n A 1 198 PHE 198 200 200 PHE PHE A . n A 1 199 ILE 199 201 201 ILE ILE A . n A 1 200 ASN 200 202 202 ASN ASN A . n A 1 201 LEU 201 203 203 LEU LEU A . n A 1 202 LEU 202 204 204 LEU LEU A . n A 1 203 ARG 203 205 205 ARG ARG A . n A 1 204 PHE 204 206 206 PHE PHE A . n A 1 205 PHE 205 207 207 PHE PHE A . n A 1 206 GLY 206 208 208 GLY GLY A . n A 1 207 ILE 207 209 209 ILE ILE A . n A 1 208 LEU 208 210 210 LEU LEU A . n A 1 209 SER 209 211 ? ? ? A . n A 1 210 SER 210 212 ? ? ? A . n A 1 211 ASP 211 213 ? ? ? A . n A 1 212 ASP 212 214 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 PT 1 301 1 PT PT A . C 2 PT 1 302 2 PT PT A . D 2 PT 1 303 3 PT PT A . # _software.citation_id ? _software.classification refinement _software.compiler_name . _software.compiler_version . _software.contact_author . _software.contact_author_email . _software.date . _software.description . _software.dependencies . _software.hardware . _software.language . _software.location . _software.mods . _software.name PHENIX _software.os . _software.os_version . _software.type . _software.version '(phenix.refine: 1.8_1069)' _software.pdbx_ordinal 1 # _cell.entry_id 4PGW _cell.length_a 47.640 _cell.length_b 161.750 _cell.length_c 123.830 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4PGW _symmetry.cell_setting . _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall . _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M . # _exptl.absorpt_coefficient_mu . _exptl.absorpt_correction_T_max . _exptl.absorpt_correction_T_min . _exptl.absorpt_correction_type . _exptl.absorpt_process_details . _exptl.entry_id 4PGW _exptl.crystals_number . _exptl.details . _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details . # _exptl_crystal.colour . _exptl_crystal.density_diffrn . _exptl_crystal.density_Matthews 5.53 _exptl_crystal.density_method . _exptl_crystal.density_percent_sol 77.76 _exptl_crystal.description . _exptl_crystal.F_000 . _exptl_crystal.id 1 _exptl_crystal.preparation . _exptl_crystal.size_max . _exptl_crystal.size_mid . _exptl_crystal.size_min . _exptl_crystal.size_rad . _exptl_crystal.colour_lustre . _exptl_crystal.colour_modifier . _exptl_crystal.colour_primary . _exptl_crystal.density_meas . _exptl_crystal.density_meas_esd . _exptl_crystal.density_meas_gt . _exptl_crystal.density_meas_lt . _exptl_crystal.density_meas_temp . _exptl_crystal.density_meas_temp_esd . _exptl_crystal.density_meas_temp_gt . _exptl_crystal.density_meas_temp_lt . _exptl_crystal.pdbx_crystal_image_url . _exptl_crystal.pdbx_crystal_image_format . _exptl_crystal.pdbx_mosaicity . _exptl_crystal.pdbx_mosaicity_esd . # _exptl_crystal_grow.apparatus . _exptl_crystal_grow.atmosphere . _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details . _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref . _exptl_crystal_grow.pH . _exptl_crystal_grow.pressure . _exptl_crystal_grow.pressure_esd . _exptl_crystal_grow.seeding . _exptl_crystal_grow.seeding_ref . _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details . _exptl_crystal_grow.temp_esd . _exptl_crystal_grow.time . _exptl_crystal_grow.pdbx_details '100 mM MES, pH 6.0, 180 mM sodium acetate, 10-15% pentaerythritolethoxylate and 27% PEG 400' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.ambient_environment . _diffrn.ambient_temp 100 _diffrn.ambient_temp_details . _diffrn.ambient_temp_esd . _diffrn.crystal_id 1 _diffrn.crystal_support . _diffrn.crystal_treatment . _diffrn.details . _diffrn.id 1 _diffrn.ambient_pressure . _diffrn.ambient_pressure_esd . _diffrn.ambient_pressure_gt . _diffrn.ambient_pressure_lt . _diffrn.ambient_temp_gt . _diffrn.ambient_temp_lt . # _diffrn_detector.details . _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'ADSC QUANTUM 4r' _diffrn_detector.area_resol_mean . _diffrn_detector.dtime . _diffrn_detector.pdbx_frames_total . _diffrn_detector.pdbx_collection_time_total . _diffrn_detector.pdbx_collection_date 2013-01-21 # _diffrn_radiation.collimation . _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge . _diffrn_radiation.inhomogeneity . _diffrn_radiation.monochromator . _diffrn_radiation.polarisn_norm . _diffrn_radiation.polarisn_ratio . _diffrn_radiation.probe . _diffrn_radiation.type . _diffrn_radiation.xray_symbol . _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list . _diffrn_radiation.pdbx_wavelength . _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer . _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.07 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current . _diffrn_source.details . _diffrn_source.diffrn_id 1 _diffrn_source.power . _diffrn_source.size . _diffrn_source.source SYNCHROTRON _diffrn_source.target . _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.voltage . _diffrn_source.take-off_angle . _diffrn_source.pdbx_wavelength_list 1.07 _diffrn_source.pdbx_wavelength . _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_synchrotron_site NSLS # _reflns.B_iso_Wilson_estimate . _reflns.entry_id 4PGW _reflns.data_reduction_details . _reflns.data_reduction_method . _reflns.d_resolution_high 3.6 _reflns.d_resolution_low 40.0 _reflns.details . _reflns.limit_h_max . _reflns.limit_h_min . _reflns.limit_k_max . _reflns.limit_k_min . _reflns.limit_l_max . _reflns.limit_l_min . _reflns.number_all . _reflns.number_obs 10695 _reflns.observed_criterion . _reflns.observed_criterion_F_max . _reflns.observed_criterion_F_min . _reflns.observed_criterion_I_max . _reflns.observed_criterion_I_min . _reflns.observed_criterion_sigma_F . _reflns.observed_criterion_sigma_I . _reflns.percent_possible_obs 99.7 _reflns.R_free_details . _reflns.Rmerge_F_all . _reflns.Rmerge_F_obs . _reflns.Friedel_coverage . _reflns.number_gt . _reflns.threshold_expression . _reflns.pdbx_redundancy 15.6 _reflns.pdbx_Rmerge_I_obs . _reflns.pdbx_Rmerge_I_all . _reflns.pdbx_Rsym_value . _reflns.pdbx_netI_over_av_sigmaI . _reflns.pdbx_netI_over_sigmaI 14.01 _reflns.pdbx_res_netI_over_av_sigmaI_2 . _reflns.pdbx_res_netI_over_sigmaI_2 . _reflns.pdbx_chi_squared . _reflns.pdbx_scaling_rejects . _reflns.pdbx_d_res_high_opt . _reflns.pdbx_d_res_low_opt . _reflns.pdbx_d_res_opt_method . _reflns.phase_calculation_details . _reflns.pdbx_Rrim_I_all . _reflns.pdbx_Rpim_I_all . _reflns.pdbx_d_opt . _reflns.pdbx_number_measured_all . _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 # _refine.aniso_B[1][1] . _refine.aniso_B[1][2] . _refine.aniso_B[1][3] . _refine.aniso_B[2][2] . _refine.aniso_B[2][3] . _refine.aniso_B[3][3] . _refine.B_iso_max . _refine.B_iso_mean . _refine.B_iso_min . _refine.correlation_coeff_Fo_to_Fc . _refine.correlation_coeff_Fo_to_Fc_free . _refine.details . _refine.diff_density_max . _refine.diff_density_max_esd . _refine.diff_density_min . _refine.diff_density_min_esd . _refine.diff_density_rms . _refine.diff_density_rms_esd . _refine.entry_id 4PGW _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details . _refine.ls_abs_structure_Flack . _refine.ls_abs_structure_Flack_esd . _refine.ls_abs_structure_Rogers . _refine.ls_abs_structure_Rogers_esd . _refine.ls_d_res_high 3.600 _refine.ls_d_res_low 36.768 _refine.ls_extinction_coef . _refine.ls_extinction_coef_esd . _refine.ls_extinction_expression . _refine.ls_extinction_method . _refine.ls_goodness_of_fit_all . _refine.ls_goodness_of_fit_all_esd . _refine.ls_goodness_of_fit_obs . _refine.ls_goodness_of_fit_obs_esd . _refine.ls_hydrogen_treatment . _refine.ls_matrix_type . _refine.ls_number_constraints . _refine.ls_number_parameters . _refine.ls_number_reflns_all . _refine.ls_number_reflns_obs 9619 _refine.ls_number_reflns_R_free 438 _refine.ls_number_reflns_R_work . _refine.ls_number_restraints . _refine.ls_percent_reflns_obs 89.73 _refine.ls_percent_reflns_R_free 4.55 _refine.ls_R_factor_all . _refine.ls_R_factor_obs 0.2860 _refine.ls_R_factor_R_free 0.3303 _refine.ls_R_factor_R_free_error . _refine.ls_R_factor_R_free_error_details . _refine.ls_R_factor_R_work 0.2839 _refine.ls_R_Fsqd_factor_obs . _refine.ls_R_I_factor_obs . _refine.ls_redundancy_reflns_all . _refine.ls_redundancy_reflns_obs . _refine.ls_restrained_S_all . _refine.ls_restrained_S_obs . _refine.ls_shift_over_esd_max . _refine.ls_shift_over_esd_mean . _refine.ls_structure_factor_coef . _refine.ls_weighting_details . _refine.ls_weighting_scheme . _refine.ls_wR_factor_all . _refine.ls_wR_factor_obs . _refine.ls_wR_factor_R_free . _refine.ls_wR_factor_R_work . _refine.occupancy_max . _refine.occupancy_min . _refine.overall_SU_B . _refine.overall_SU_ML 0.50 _refine.overall_SU_R_Cruickshank_DPI . _refine.overall_SU_R_free . _refine.overall_FOM_free_R_set . _refine.overall_FOM_work_R_set . _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol . _refine.solvent_model_param_ksol . _refine.ls_R_factor_gt . _refine.ls_goodness_of_fit_gt . _refine.ls_goodness_of_fit_ref . _refine.ls_shift_over_su_max . _refine.ls_shift_over_su_max_lt . _refine.ls_shift_over_su_mean . _refine.ls_shift_over_su_mean_lt . _refine.pdbx_ls_sigma_I . _refine.pdbx_ls_sigma_F 1.91 _refine.pdbx_ls_sigma_Fsqd . _refine.pdbx_data_cutoff_high_absF . _refine.pdbx_data_cutoff_high_rms_absF . _refine.pdbx_data_cutoff_low_absF . _refine.pdbx_isotropic_thermal_model . _refine.pdbx_ls_cross_valid_method 'FREE R-VALUE' _refine.pdbx_method_to_determine_struct . _refine.pdbx_starting_model . _refine.pdbx_stereochemistry_target_values MLHL _refine.pdbx_R_Free_selection_details . _refine.pdbx_stereochem_target_val_spec_case . _refine.pdbx_overall_ESU_R . _refine.pdbx_overall_ESU_R_Free . _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii . _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_real_space_R . _refine.pdbx_density_correlation . _refine.pdbx_pd_number_of_powder_patterns . _refine.pdbx_pd_number_of_points . _refine.pdbx_pd_meas_number_of_points . _refine.pdbx_pd_proc_ls_prof_R_factor . _refine.pdbx_pd_proc_ls_prof_wR_factor . _refine.pdbx_pd_Marquardt_correlation_coeff . _refine.pdbx_pd_Fsqrd_R_factor . _refine.pdbx_pd_ls_matrix_band_width . _refine.pdbx_overall_phase_error 49.17 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI . _refine.pdbx_overall_SU_R_free_Blow_DPI . _refine.pdbx_overall_SU_R_Blow_DPI . _refine.pdbx_TLS_residual_ADP_flag . _refine.pdbx_diffrn_id 1 # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1527 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 3 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1530 _refine_hist.d_res_high 3.600 _refine_hist.d_res_low 36.768 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' . 0.004 . 1566 . f_bond_d . . 'X-RAY DIFFRACTION' . 0.794 . 2134 . f_angle_d . . 'X-RAY DIFFRACTION' . 11.549 . 521 . f_dihedral_angle_d . . 'X-RAY DIFFRACTION' . 0.053 . 267 . f_chiral_restr . . 'X-RAY DIFFRACTION' . 0.004 . 250 . f_plane_restr . . # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error 'X-RAY DIFFRACTION' 3.6001 4.1205 . . 126 2457 72.00 . . . 0.3772 . 0.3195 . . . . . . . . 'X-RAY DIFFRACTION' 4.1205 5.1890 . . 161 3330 98.00 . . . 0.3137 . 0.2855 . . . . . . . . 'X-RAY DIFFRACTION' 5.1890 36.7702 . . 151 3394 99.00 . . . 0.3247 . 0.2732 . . . . . . . . # _struct.entry_id 4PGW _struct.title 'Crystal structure of YetJ from Bacillus Subtilis at pH 6 by Pt-SAD' _struct.pdbx_model_details . _struct.pdbx_formula_weight . _struct.pdbx_formula_weight_method . _struct.pdbx_model_type_details . _struct.pdbx_CASP_flag . # _struct_keywords.entry_id 4PGW _struct_keywords.text ;Membrane protein, 7-TMs, triple-helix sandwich, di-aspartyl pH sensor, calcium leak, open-conformation, Pt-SAD phasing, Structural Genomics, PSI-Biology, New York Consortium on Membrane Protein Structure, NYCOMPS, Membrance Protein ; _struct_keywords.pdbx_keywords 'Membrance Protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YETJ_BACSU _struct_ref.pdbx_db_accession O31539 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;HESKQSIMQRILTVFVFTLLIATVGLFIGQFVPVALMLPLSILEVAMIILAFWMRRRKAVGYAFVYTFAFVSGITLFPIV SHYASIAGAYVVLEAFGSTFVIFAVLGTIGAKMKKDLSFLWSFLLVAVLALAVVGIFNIFSPLNSAAMMAYSVIGTIVFS LYILYDLNQIKHRHITEDLIPVMALSLYLDFINLFINLLRFFGILSSDD ; _struct_ref.pdbx_align_begin 6 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4PGW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 212 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O31539 _struct_ref_seq.db_align_beg 6 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 214 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 6 _struct_ref_seq.pdbx_auth_seq_align_end 214 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4PGW SER A 1 ? UNP O31539 ? ? 'expression tag' 3 1 1 4PGW ASN A 2 ? UNP O31539 ? ? 'expression tag' 4 2 1 4PGW ALA A 3 ? UNP O31539 ? ? 'expression tag' 5 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 9 ? GLN A 33 ? SER A 11 GLN A 35 1 ? 25 HELX_P HELX_P2 AA2 LEU A 39 ? PHE A 55 ? LEU A 41 PHE A 57 1 ? 17 HELX_P HELX_P3 AA3 GLY A 64 ? LEU A 79 ? GLY A 66 LEU A 81 1 ? 16 HELX_P HELX_P4 AA4 LEU A 79 ? GLY A 91 ? LEU A 81 GLY A 93 1 ? 13 HELX_P HELX_P5 AA5 GLY A 91 ? MET A 116 ? GLY A 93 MET A 118 1 ? 26 HELX_P HELX_P6 AA6 LEU A 123 ? SER A 144 ? LEU A 125 SER A 146 1 ? 22 HELX_P HELX_P7 AA7 ASN A 147 ? HIS A 175 ? ASN A 149 HIS A 177 1 ? 29 HELX_P HELX_P8 AA8 THR A 179 ? ASP A 181 ? THR A 181 ASP A 183 5 ? 3 HELX_P HELX_P9 AA9 LEU A 182 ? LEU A 208 ? LEU A 184 LEU A 210 1 ? 27 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A MET 11 SD ? ? ? 1_555 C PT . PT ? ? A MET 13 A PT 302 1_555 ? ? ? ? ? ? ? 2.323 ? ? metalc2 metalc ? ? A MET 116 SD ? ? ? 1_555 D PT . PT ? ? A MET 118 A PT 303 1_555 ? ? ? ? ? ? ? 2.703 ? ? metalc3 metalc ? ? A MET 186 SD ? ? ? 1_555 B PT . PT ? ? A MET 188 A PT 301 1_555 ? ? ? ? ? ? ? 2.146 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PT 301 ? 1 'binding site for residue PT A 301' AC2 Software A PT 302 ? 1 'binding site for residue PT A 302' AC3 Software A PT 303 ? 1 'binding site for residue PT A 303' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 MET A 186 ? MET A 188 . ? 1_555 ? 2 AC2 1 MET A 11 ? MET A 13 . ? 1_555 ? 3 AC3 1 MET A 116 ? MET A 118 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 39 ? ? -67.82 -177.16 2 1 ALA A 40 ? ? 64.83 -5.70 3 1 THR A 80 ? ? -69.82 4.09 4 1 LEU A 122 ? ? -77.38 46.33 5 1 HIS A 177 ? ? -102.44 -76.88 6 1 HIS A 179 ? ? -67.70 81.46 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'New York Consortium on Membrane Protein Structure' _pdbx_SG_project.initial_of_center NYCOMPS # loop_ _pdbx_refine_tls.id _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[1][1]_esd _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][2]_esd _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[1][3]_esd _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[2][2]_esd _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.T[2][3]_esd _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[3][3]_esd _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[1][1]_esd _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][2]_esd _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[1][3]_esd _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[2][2]_esd _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.L[2][3]_esd _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[3][3]_esd _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][1]_esd _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][2]_esd _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[1][3]_esd _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][1]_esd _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][2]_esd _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][3]_esd _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][1]_esd _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][2]_esd _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[3][3]_esd 1 'X-RAY DIFFRACTION' . refined 38.4759 58.7577 45.1153 1.2329 . 0.1474 . -0.0862 . 1.3652 . -0.0899 . 1.2519 . 6.0643 . -0.7924 . -0.1937 . 1.2301 . -0.7968 . 1.3344 . -0.6610 . 2.3624 . -1.7814 . -0.4351 . 1.0025 . 0.2354 . 0.6872 . 0.8526 . 0.0151 . 2 'X-RAY DIFFRACTION' . refined 49.5211 70.2519 35.6665 1.1062 . -0.0635 . -0.2135 . 0.4339 . 0.2646 . 1.1430 . 1.3456 . 1.6264 . 0.2468 . 1.6619 . 0.3452 . 0.4658 . 0.7190 . -0.0203 . -2.8799 . -0.0285 . -0.0704 . 0.0435 . -0.7592 . -0.2157 . 0.0170 . 3 'X-RAY DIFFRACTION' . refined 32.3674 73.8222 35.2775 0.8515 . -0.2588 . 0.2669 . 1.8490 . 0.3923 . 1.2737 . 0.2987 . -0.5163 . -0.3875 . 1.9686 . 0.5629 . 0.6658 . 0.4156 . 1.5372 . -0.4659 . 0.5556 . -0.3106 . 3.6135 . -0.0744 . -2.9959 . -0.2248 . 4 'X-RAY DIFFRACTION' . refined 48.6309 64.5009 48.7586 0.7996 . -0.0611 . -0.1738 . 1.6293 . 0.1931 . 1.1319 . 1.3801 . -0.6467 . -1.9731 . 1.8510 . 0.5082 . 2.7076 . 0.0456 . -1.1758 . -1.1409 . 0.3652 . 0.0082 . -0.2349 . 0.7017 . 0.4387 . 0.0001 . 5 'X-RAY DIFFRACTION' . refined 27.3030 69.0175 59.1430 0.3270 . -0.1937 . 0.2784 . 2.1864 . 0.4917 . 1.6135 . 2.0055 . -6.6307 . 8.4879 . 3.4258 . -4.2883 . 5.6686 . 0.9399 . 0.2256 . -1.6899 . -1.8163 . 1.4299 . 1.1010 . 2.0591 . 0.1067 . 2.4162 . 6 'X-RAY DIFFRACTION' . refined 42.8669 83.3173 49.6074 1.0526 . -0.0381 . 0.0604 . 1.5133 . 0.0245 . 0.8189 . 0.8982 . 1.1237 . -0.1030 . 1.0262 . 0.4302 . 0.4248 . -0.7873 . 1.4842 . 1.7953 . -1.2386 . 1.1781 . -0.5643 . 0.3122 . -0.2585 . 0.0132 . 7 'X-RAY DIFFRACTION' . refined 33.2967 73.5624 51.6907 0.7869 . -0.0388 . 0.0267 . 2.0530 . -0.0446 . 0.9954 . 1.1599 . -1.6444 . -1.6877 . 2.4804 . 2.7419 . 2.0749 . 0.0431 . 3.3927 . 0.9956 . 0.0664 . -0.1413 . 0.5321 . 0.0562 . -1.6439 . 0.1297 . 8 'X-RAY DIFFRACTION' . refined 42.8392 69.7224 51.0589 0.9441 . -0.0674 . 0.0297 . 1.6925 . -0.1999 . 1.2391 . 0.1213 . -0.1476 . -0.1539 . 0.2122 . 0.5692 . 0.6640 . -0.7641 . -0.7929 . 1.6469 . 0.5437 . -0.5943 . 1.1432 . 0.4056 . 0.1903 . -0.0027 . # loop_ _pdbx_refine_tls_group.id _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 1 'X-RAY DIFFRACTION' 1 . . . . . . . . . '(chain A and resid 11:35)' 2 'X-RAY DIFFRACTION' 2 . . . . . . . . . '(chain A and resid 36:56)' 3 'X-RAY DIFFRACTION' 3 . . . . . . . . . '(chain A and resid 57:66)' 4 'X-RAY DIFFRACTION' 4 . . . . . . . . . '(chain A and resid 67:107)' 5 'X-RAY DIFFRACTION' 5 . . . . . . . . . '(chain A and resid 108:121)' 6 'X-RAY DIFFRACTION' 6 . . . . . . . . . '(chain A and resid 122:151)' 7 'X-RAY DIFFRACTION' 7 . . . . . . . . . '(chain A and resid 152:184)' 8 'X-RAY DIFFRACTION' 8 . . . . . . . . . '(chain A and resid 185:210)' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 3 ? A SER 1 2 1 Y 1 A ASN 4 ? A ASN 2 3 1 Y 1 A ALA 5 ? A ALA 3 4 1 Y 1 A HIS 6 ? A HIS 4 5 1 Y 1 A GLU 7 ? A GLU 5 6 1 Y 1 A SER 8 ? A SER 6 7 1 Y 1 A LYS 9 ? A LYS 7 8 1 Y 1 A GLN 10 ? A GLN 8 9 1 Y 1 A MET 59 ? A MET 57 10 1 Y 1 A ARG 60 ? A ARG 58 11 1 Y 1 A ARG 61 ? A ARG 59 12 1 Y 1 A ARG 62 ? A ARG 60 13 1 Y 1 A LYS 63 ? A LYS 61 14 1 Y 1 A SER 211 ? A SER 209 15 1 Y 1 A SER 212 ? A SER 210 16 1 Y 1 A ASP 213 ? A ASP 211 17 1 Y 1 A ASP 214 ? A ASP 212 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 ILE N N N N 144 ILE CA C N S 145 ILE C C N N 146 ILE O O N N 147 ILE CB C N S 148 ILE CG1 C N N 149 ILE CG2 C N N 150 ILE CD1 C N N 151 ILE OXT O N N 152 ILE H H N N 153 ILE H2 H N N 154 ILE HA H N N 155 ILE HB H N N 156 ILE HG12 H N N 157 ILE HG13 H N N 158 ILE HG21 H N N 159 ILE HG22 H N N 160 ILE HG23 H N N 161 ILE HD11 H N N 162 ILE HD12 H N N 163 ILE HD13 H N N 164 ILE HXT H N N 165 LEU N N N N 166 LEU CA C N S 167 LEU C C N N 168 LEU O O N N 169 LEU CB C N N 170 LEU CG C N N 171 LEU CD1 C N N 172 LEU CD2 C N N 173 LEU OXT O N N 174 LEU H H N N 175 LEU H2 H N N 176 LEU HA H N N 177 LEU HB2 H N N 178 LEU HB3 H N N 179 LEU HG H N N 180 LEU HD11 H N N 181 LEU HD12 H N N 182 LEU HD13 H N N 183 LEU HD21 H N N 184 LEU HD22 H N N 185 LEU HD23 H N N 186 LEU HXT H N N 187 LYS N N N N 188 LYS CA C N S 189 LYS C C N N 190 LYS O O N N 191 LYS CB C N N 192 LYS CG C N N 193 LYS CD C N N 194 LYS CE C N N 195 LYS NZ N N N 196 LYS OXT O N N 197 LYS H H N N 198 LYS H2 H N N 199 LYS HA H N N 200 LYS HB2 H N N 201 LYS HB3 H N N 202 LYS HG2 H N N 203 LYS HG3 H N N 204 LYS HD2 H N N 205 LYS HD3 H N N 206 LYS HE2 H N N 207 LYS HE3 H N N 208 LYS HZ1 H N N 209 LYS HZ2 H N N 210 LYS HZ3 H N N 211 LYS HXT H N N 212 MET N N N N 213 MET CA C N S 214 MET C C N N 215 MET O O N N 216 MET CB C N N 217 MET CG C N N 218 MET SD S N N 219 MET CE C N N 220 MET OXT O N N 221 MET H H N N 222 MET H2 H N N 223 MET HA H N N 224 MET HB2 H N N 225 MET HB3 H N N 226 MET HG2 H N N 227 MET HG3 H N N 228 MET HE1 H N N 229 MET HE2 H N N 230 MET HE3 H N N 231 MET HXT H N N 232 PHE N N N N 233 PHE CA C N S 234 PHE C C N N 235 PHE O O N N 236 PHE CB C N N 237 PHE CG C Y N 238 PHE CD1 C Y N 239 PHE CD2 C Y N 240 PHE CE1 C Y N 241 PHE CE2 C Y N 242 PHE CZ C Y N 243 PHE OXT O N N 244 PHE H H N N 245 PHE H2 H N N 246 PHE HA H N N 247 PHE HB2 H N N 248 PHE HB3 H N N 249 PHE HD1 H N N 250 PHE HD2 H N N 251 PHE HE1 H N N 252 PHE HE2 H N N 253 PHE HZ H N N 254 PHE HXT H N N 255 PRO N N N N 256 PRO CA C N S 257 PRO C C N N 258 PRO O O N N 259 PRO CB C N N 260 PRO CG C N N 261 PRO CD C N N 262 PRO OXT O N N 263 PRO H H N N 264 PRO HA H N N 265 PRO HB2 H N N 266 PRO HB3 H N N 267 PRO HG2 H N N 268 PRO HG3 H N N 269 PRO HD2 H N N 270 PRO HD3 H N N 271 PRO HXT H N N 272 PT PT PT N N 273 SER N N N N 274 SER CA C N S 275 SER C C N N 276 SER O O N N 277 SER CB C N N 278 SER OG O N N 279 SER OXT O N N 280 SER H H N N 281 SER H2 H N N 282 SER HA H N N 283 SER HB2 H N N 284 SER HB3 H N N 285 SER HG H N N 286 SER HXT H N N 287 THR N N N N 288 THR CA C N S 289 THR C C N N 290 THR O O N N 291 THR CB C N R 292 THR OG1 O N N 293 THR CG2 C N N 294 THR OXT O N N 295 THR H H N N 296 THR H2 H N N 297 THR HA H N N 298 THR HB H N N 299 THR HG1 H N N 300 THR HG21 H N N 301 THR HG22 H N N 302 THR HG23 H N N 303 THR HXT H N N 304 TRP N N N N 305 TRP CA C N S 306 TRP C C N N 307 TRP O O N N 308 TRP CB C N N 309 TRP CG C Y N 310 TRP CD1 C Y N 311 TRP CD2 C Y N 312 TRP NE1 N Y N 313 TRP CE2 C Y N 314 TRP CE3 C Y N 315 TRP CZ2 C Y N 316 TRP CZ3 C Y N 317 TRP CH2 C Y N 318 TRP OXT O N N 319 TRP H H N N 320 TRP H2 H N N 321 TRP HA H N N 322 TRP HB2 H N N 323 TRP HB3 H N N 324 TRP HD1 H N N 325 TRP HE1 H N N 326 TRP HE3 H N N 327 TRP HZ2 H N N 328 TRP HZ3 H N N 329 TRP HH2 H N N 330 TRP HXT H N N 331 TYR N N N N 332 TYR CA C N S 333 TYR C C N N 334 TYR O O N N 335 TYR CB C N N 336 TYR CG C Y N 337 TYR CD1 C Y N 338 TYR CD2 C Y N 339 TYR CE1 C Y N 340 TYR CE2 C Y N 341 TYR CZ C Y N 342 TYR OH O N N 343 TYR OXT O N N 344 TYR H H N N 345 TYR H2 H N N 346 TYR HA H N N 347 TYR HB2 H N N 348 TYR HB3 H N N 349 TYR HD1 H N N 350 TYR HD2 H N N 351 TYR HE1 H N N 352 TYR HE2 H N N 353 TYR HH H N N 354 TYR HXT H N N 355 VAL N N N N 356 VAL CA C N S 357 VAL C C N N 358 VAL O O N N 359 VAL CB C N N 360 VAL CG1 C N N 361 VAL CG2 C N N 362 VAL OXT O N N 363 VAL H H N N 364 VAL H2 H N N 365 VAL HA H N N 366 VAL HB H N N 367 VAL HG11 H N N 368 VAL HG12 H N N 369 VAL HG13 H N N 370 VAL HG21 H N N 371 VAL HG22 H N N 372 VAL HG23 H N N 373 VAL HXT H N N 374 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 ILE N CA sing N N 137 ILE N H sing N N 138 ILE N H2 sing N N 139 ILE CA C sing N N 140 ILE CA CB sing N N 141 ILE CA HA sing N N 142 ILE C O doub N N 143 ILE C OXT sing N N 144 ILE CB CG1 sing N N 145 ILE CB CG2 sing N N 146 ILE CB HB sing N N 147 ILE CG1 CD1 sing N N 148 ILE CG1 HG12 sing N N 149 ILE CG1 HG13 sing N N 150 ILE CG2 HG21 sing N N 151 ILE CG2 HG22 sing N N 152 ILE CG2 HG23 sing N N 153 ILE CD1 HD11 sing N N 154 ILE CD1 HD12 sing N N 155 ILE CD1 HD13 sing N N 156 ILE OXT HXT sing N N 157 LEU N CA sing N N 158 LEU N H sing N N 159 LEU N H2 sing N N 160 LEU CA C sing N N 161 LEU CA CB sing N N 162 LEU CA HA sing N N 163 LEU C O doub N N 164 LEU C OXT sing N N 165 LEU CB CG sing N N 166 LEU CB HB2 sing N N 167 LEU CB HB3 sing N N 168 LEU CG CD1 sing N N 169 LEU CG CD2 sing N N 170 LEU CG HG sing N N 171 LEU CD1 HD11 sing N N 172 LEU CD1 HD12 sing N N 173 LEU CD1 HD13 sing N N 174 LEU CD2 HD21 sing N N 175 LEU CD2 HD22 sing N N 176 LEU CD2 HD23 sing N N 177 LEU OXT HXT sing N N 178 LYS N CA sing N N 179 LYS N H sing N N 180 LYS N H2 sing N N 181 LYS CA C sing N N 182 LYS CA CB sing N N 183 LYS CA HA sing N N 184 LYS C O doub N N 185 LYS C OXT sing N N 186 LYS CB CG sing N N 187 LYS CB HB2 sing N N 188 LYS CB HB3 sing N N 189 LYS CG CD sing N N 190 LYS CG HG2 sing N N 191 LYS CG HG3 sing N N 192 LYS CD CE sing N N 193 LYS CD HD2 sing N N 194 LYS CD HD3 sing N N 195 LYS CE NZ sing N N 196 LYS CE HE2 sing N N 197 LYS CE HE3 sing N N 198 LYS NZ HZ1 sing N N 199 LYS NZ HZ2 sing N N 200 LYS NZ HZ3 sing N N 201 LYS OXT HXT sing N N 202 MET N CA sing N N 203 MET N H sing N N 204 MET N H2 sing N N 205 MET CA C sing N N 206 MET CA CB sing N N 207 MET CA HA sing N N 208 MET C O doub N N 209 MET C OXT sing N N 210 MET CB CG sing N N 211 MET CB HB2 sing N N 212 MET CB HB3 sing N N 213 MET CG SD sing N N 214 MET CG HG2 sing N N 215 MET CG HG3 sing N N 216 MET SD CE sing N N 217 MET CE HE1 sing N N 218 MET CE HE2 sing N N 219 MET CE HE3 sing N N 220 MET OXT HXT sing N N 221 PHE N CA sing N N 222 PHE N H sing N N 223 PHE N H2 sing N N 224 PHE CA C sing N N 225 PHE CA CB sing N N 226 PHE CA HA sing N N 227 PHE C O doub N N 228 PHE C OXT sing N N 229 PHE CB CG sing N N 230 PHE CB HB2 sing N N 231 PHE CB HB3 sing N N 232 PHE CG CD1 doub Y N 233 PHE CG CD2 sing Y N 234 PHE CD1 CE1 sing Y N 235 PHE CD1 HD1 sing N N 236 PHE CD2 CE2 doub Y N 237 PHE CD2 HD2 sing N N 238 PHE CE1 CZ doub Y N 239 PHE CE1 HE1 sing N N 240 PHE CE2 CZ sing Y N 241 PHE CE2 HE2 sing N N 242 PHE CZ HZ sing N N 243 PHE OXT HXT sing N N 244 PRO N CA sing N N 245 PRO N CD sing N N 246 PRO N H sing N N 247 PRO CA C sing N N 248 PRO CA CB sing N N 249 PRO CA HA sing N N 250 PRO C O doub N N 251 PRO C OXT sing N N 252 PRO CB CG sing N N 253 PRO CB HB2 sing N N 254 PRO CB HB3 sing N N 255 PRO CG CD sing N N 256 PRO CG HG2 sing N N 257 PRO CG HG3 sing N N 258 PRO CD HD2 sing N N 259 PRO CD HD3 sing N N 260 PRO OXT HXT sing N N 261 SER N CA sing N N 262 SER N H sing N N 263 SER N H2 sing N N 264 SER CA C sing N N 265 SER CA CB sing N N 266 SER CA HA sing N N 267 SER C O doub N N 268 SER C OXT sing N N 269 SER CB OG sing N N 270 SER CB HB2 sing N N 271 SER CB HB3 sing N N 272 SER OG HG sing N N 273 SER OXT HXT sing N N 274 THR N CA sing N N 275 THR N H sing N N 276 THR N H2 sing N N 277 THR CA C sing N N 278 THR CA CB sing N N 279 THR CA HA sing N N 280 THR C O doub N N 281 THR C OXT sing N N 282 THR CB OG1 sing N N 283 THR CB CG2 sing N N 284 THR CB HB sing N N 285 THR OG1 HG1 sing N N 286 THR CG2 HG21 sing N N 287 THR CG2 HG22 sing N N 288 THR CG2 HG23 sing N N 289 THR OXT HXT sing N N 290 TRP N CA sing N N 291 TRP N H sing N N 292 TRP N H2 sing N N 293 TRP CA C sing N N 294 TRP CA CB sing N N 295 TRP CA HA sing N N 296 TRP C O doub N N 297 TRP C OXT sing N N 298 TRP CB CG sing N N 299 TRP CB HB2 sing N N 300 TRP CB HB3 sing N N 301 TRP CG CD1 doub Y N 302 TRP CG CD2 sing Y N 303 TRP CD1 NE1 sing Y N 304 TRP CD1 HD1 sing N N 305 TRP CD2 CE2 doub Y N 306 TRP CD2 CE3 sing Y N 307 TRP NE1 CE2 sing Y N 308 TRP NE1 HE1 sing N N 309 TRP CE2 CZ2 sing Y N 310 TRP CE3 CZ3 doub Y N 311 TRP CE3 HE3 sing N N 312 TRP CZ2 CH2 doub Y N 313 TRP CZ2 HZ2 sing N N 314 TRP CZ3 CH2 sing Y N 315 TRP CZ3 HZ3 sing N N 316 TRP CH2 HH2 sing N N 317 TRP OXT HXT sing N N 318 TYR N CA sing N N 319 TYR N H sing N N 320 TYR N H2 sing N N 321 TYR CA C sing N N 322 TYR CA CB sing N N 323 TYR CA HA sing N N 324 TYR C O doub N N 325 TYR C OXT sing N N 326 TYR CB CG sing N N 327 TYR CB HB2 sing N N 328 TYR CB HB3 sing N N 329 TYR CG CD1 doub Y N 330 TYR CG CD2 sing Y N 331 TYR CD1 CE1 sing Y N 332 TYR CD1 HD1 sing N N 333 TYR CD2 CE2 doub Y N 334 TYR CD2 HD2 sing N N 335 TYR CE1 CZ doub Y N 336 TYR CE1 HE1 sing N N 337 TYR CE2 CZ sing Y N 338 TYR CE2 HE2 sing N N 339 TYR CZ OH sing N N 340 TYR OH HH sing N N 341 TYR OXT HXT sing N N 342 VAL N CA sing N N 343 VAL N H sing N N 344 VAL N H2 sing N N 345 VAL CA C sing N N 346 VAL CA CB sing N N 347 VAL CA HA sing N N 348 VAL C O doub N N 349 VAL C OXT sing N N 350 VAL CB CG1 sing N N 351 VAL CB CG2 sing N N 352 VAL CB HB sing N N 353 VAL CG1 HG11 sing N N 354 VAL CG1 HG12 sing N N 355 VAL CG1 HG13 sing N N 356 VAL CG2 HG21 sing N N 357 VAL CG2 HG22 sing N N 358 VAL CG2 HG23 sing N N 359 VAL OXT HXT sing N N 360 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number GM095315 _pdbx_audit_support.ordinal 1 # _atom_sites.entry_id 4PGW _atom_sites.fract_transf_matrix[1][1] 0.020991 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.006182 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008076 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O PT S # loop_