HEADER HYDROLASE/HYDROLASE INHIBITOR 15-MAY-14 4PKU TITLE ANTHRAX TOXIN LETHAL FACTOR WITH BOUND SMALL MOLECULE INHIBITOR 15 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LETHAL FACTOR; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 298-809; COMPND 5 SYNONYM: LF,ANTHRAX LETHAL TOXIN ENDOPEPTIDASE COMPONENT; COMPND 6 EC: 3.4.24.83; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 1392; SOURCE 4 GENE: LEF, PXO1-107, BXA0172, GBAA_PXO1_0172; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG10 KEYWDS ANTHRAX TOXIN, LETHAL FACTOR, METALLOPROTEINASE, METALLOPROTEASE, KEYWDS 2 STRUCTURAL DYNAMICS, LIGAND-INDUCED CONFORMATIONAL CHANGE, KEYWDS 3 HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR K.M.MAIZE,T.DE LA MORA,B.C.FINZEL REVDAT 5 27-DEC-23 4PKU 1 REMARK REVDAT 4 11-DEC-19 4PKU 1 REMARK REVDAT 3 27-SEP-17 4PKU 1 SOURCE KEYWDS REMARK REVDAT 2 26-NOV-14 4PKU 1 JRNL REVDAT 1 12-NOV-14 4PKU 0 JRNL AUTH K.M.MAIZE,E.K.KURBANOV,T.DE LA MORA-REY,T.W.GEDERS, JRNL AUTH 2 D.J.HWANG,M.A.WALTERS,R.L.JOHNSON,E.A.AMIN,B.C.FINZEL JRNL TITL ANTHRAX TOXIN LETHAL FACTOR DOMAIN 3 IS HIGHLY MOBILE AND JRNL TITL 2 RESPONSIVE TO LIGAND BINDING. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2813 2014 JRNL REFN ESSN 1399-0047 JRNL PMID 25372673 JRNL DOI 10.1107/S1399004714018161 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 24080 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.080 REMARK 3 FREE R VALUE TEST SET COUNT : 1223 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5224 - 4.9903 1.00 2698 148 0.1734 0.2102 REMARK 3 2 4.9903 - 3.9616 1.00 2565 139 0.1628 0.2331 REMARK 3 3 3.9616 - 3.4611 1.00 2547 140 0.1839 0.2413 REMARK 3 4 3.4611 - 3.1447 1.00 2527 146 0.2256 0.2793 REMARK 3 5 3.1447 - 2.9193 1.00 2520 113 0.2364 0.2866 REMARK 3 6 2.9193 - 2.7473 1.00 2540 121 0.2292 0.2867 REMARK 3 7 2.7473 - 2.6097 1.00 2484 138 0.2319 0.2877 REMARK 3 8 2.6097 - 2.4961 1.00 2492 151 0.2286 0.2784 REMARK 3 9 2.4961 - 2.4000 1.00 2484 127 0.2318 0.2955 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 43.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.23 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4037 REMARK 3 ANGLE : 0.752 5452 REMARK 3 CHIRALITY : 0.028 603 REMARK 3 PLANARITY : 0.003 702 REMARK 3 DIHEDRAL : 15.545 1519 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PKU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000201583. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 17-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS 2.5.1 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24160 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 143.360 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11-16% PEG 8K, 50 MM BIS-TRIS, 100 MM REMARK 280 MAGNESIUM ACETATE, PH 6.8, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 286K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 30.66850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 71.67900 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.94750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 71.67900 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 30.66850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.94750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 262 REMARK 465 ASN A 263 REMARK 465 ALA A 264 REMARK 465 LEU A 265 REMARK 465 ILE A 345 REMARK 465 ARG A 346 REMARK 465 ASP A 347 REMARK 465 SER A 348 REMARK 465 LEU A 349 REMARK 465 SER A 350 REMARK 465 GLU A 351 REMARK 465 GLU A 352 REMARK 465 GLU A 353 REMARK 465 LYS A 354 REMARK 465 GLU A 355 REMARK 465 LEU A 356 REMARK 465 LEU A 357 REMARK 465 ASN A 358 REMARK 465 ARG A 359 REMARK 465 ILE A 360 REMARK 465 GLN A 361 REMARK 465 VAL A 362 REMARK 465 ASP A 363 REMARK 465 SER A 364 REMARK 465 SER A 365 REMARK 465 ASN A 366 REMARK 465 LEU A 777 REMARK 465 VAL A 778 REMARK 465 PRO A 779 REMARK 465 ARG A 780 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 LYS A 304 CG CD CE NZ REMARK 470 HIS A 309 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 317 CG CD OE1 OE2 REMARK 470 LEU A 318 CG CD1 CD2 REMARK 470 LYS A 320 CG CD CE NZ REMARK 470 ARG A 321 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 322 CG1 CG2 CD1 REMARK 470 GLN A 323 CG CD OE1 NE2 REMARK 470 ILE A 324 CG1 CG2 CD1 REMARK 470 ASP A 325 CG OD1 OD2 REMARK 470 SER A 326 OG REMARK 470 GLU A 333 CG CD OE1 OE2 REMARK 470 LYS A 335 CG CD CE NZ REMARK 470 GLU A 336 CG CD OE1 OE2 REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 ASP A 344 CG OD1 OD2 REMARK 470 GLU A 372 CG CD OE1 OE2 REMARK 470 ASP A 495 CG OD1 OD2 REMARK 470 ASN A 496 CG OD1 ND2 REMARK 470 SER A 538 OG REMARK 470 GLU A 539 CG CD OE1 OE2 REMARK 470 LYS A 578 CG CD CE NZ REMARK 470 ASP A 701 CG OD1 OD2 REMARK 470 ASN A 703 CG OD1 ND2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OE2 GLU A 269 OG SER A 312 4455 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 586 77.48 -110.00 REMARK 500 LEU A 725 -127.19 -117.79 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 686 NE2 REMARK 620 2 HIS A 690 NE2 83.4 REMARK 620 3 GLU A 735 OE1 91.2 105.2 REMARK 620 4 30P A 801 O5 91.7 92.0 162.8 REMARK 620 5 30P A 801 O3 93.5 169.6 84.8 78.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 30P A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 802 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JKY RELATED DB: PDB REMARK 900 THE FULL-LENGTH PROTEIN IN A I4132 SPACEGROUP REMARK 900 RELATED ID: 1J7N RELATED DB: PDB REMARK 900 THE FULL-LENGTH PROTEIN WITH BOUND ZINC IN A P21 SPACEGROUP REMARK 900 RELATED ID: 1PWP RELATED DB: PDB REMARK 900 THE FULL-LENGTH PROTEIN COMPLEXED WITH SMALL MOLECULE INHIBITOR NSC REMARK 900 12155 IN A P21 SPACEGROUP REMARK 900 RELATED ID: 1PWQ RELATED DB: PDB REMARK 900 THE FULL-LENGTH PROTEIN COMPLEXED WITH A METAL-CHELATING PEPTIDYL REMARK 900 SMALL MOLECULE INHIBITOR IN A P21 SPACEGROUP REMARK 900 RELATED ID: 1PWU RELATED DB: PDB REMARK 900 THE FULL-LENGTH PROTEIN COMPLEXED WITH GM6001 IN A P21 SPACEGROUP REMARK 900 RELATED ID: 1PWV RELATED DB: PDB REMARK 900 THE FULL-LENGTH PROTEIN COMPLEXED WITH AN OPTIMIZED PEPTIDE REMARK 900 SUBSTRATE IN A P21 SPACEGROUP REMARK 900 RELATED ID: 1PWW RELATED DB: PDB REMARK 900 THE FULL-LENGTH INACTIVE MUTANT PROTEIN COMPLEXED WITH AN OPTIMIZED REMARK 900 PEPTIDE SUBSTRATE AND ZINC IN A P21 SPACEGROUP. REMARK 900 RELATED ID: 1ZXV RELATED DB: PDB REMARK 900 THE FULL-LENGTH PROTEIN COMPLEXED WITH A SMALL MOLECULE INHIBITOR REMARK 900 IN A P21 SPACEGROUP REMARK 900 RELATED ID: 1YQY RELATED DB: PDB REMARK 900 THE N-TERMINALLY TRUNCATED PROTEIN COMPLEXED WITH A SMALL MOLECULE REMARK 900 INHIBITOR IN A P212121 SPACEGROUP REMARK 900 RELATED ID: 4PKQ RELATED DB: PDB REMARK 900 RELATED ID: 4PKR RELATED DB: PDB REMARK 900 RELATED ID: 4PKS RELATED DB: PDB REMARK 900 RELATED ID: 4PKT RELATED DB: PDB REMARK 900 RELATED ID: 4PKV RELATED DB: PDB REMARK 900 RELATED ID: 4PKW RELATED DB: PDB DBREF 4PKU A 265 776 UNP P15917 LEF_BACAN 298 809 SEQADV 4PKU SER A 262 UNP P15917 EXPRESSION TAG SEQADV 4PKU ASN A 263 UNP P15917 EXPRESSION TAG SEQADV 4PKU ALA A 264 UNP P15917 EXPRESSION TAG SEQADV 4PKU SER A 266 UNP P15917 ALA 299 ENGINEERED MUTATION SEQADV 4PKU LEU A 777 UNP P15917 EXPRESSION TAG SEQADV 4PKU VAL A 778 UNP P15917 EXPRESSION TAG SEQADV 4PKU PRO A 779 UNP P15917 EXPRESSION TAG SEQADV 4PKU ARG A 780 UNP P15917 EXPRESSION TAG SEQRES 1 A 519 SER ASN ALA LEU SER ARG TYR GLU LYS TRP GLU LYS ILE SEQRES 2 A 519 LYS GLN HIS TYR GLN HIS TRP SER ASP SER LEU SER GLU SEQRES 3 A 519 GLU GLY ARG GLY LEU LEU LYS LYS LEU GLN ILE PRO ILE SEQRES 4 A 519 GLU PRO LYS LYS ASP ASP ILE ILE HIS SER LEU SER GLN SEQRES 5 A 519 GLU GLU LYS GLU LEU LEU LYS ARG ILE GLN ILE ASP SER SEQRES 6 A 519 SER ASP PHE LEU SER THR GLU GLU LYS GLU PHE LEU LYS SEQRES 7 A 519 LYS LEU GLN ILE ASP ILE ARG ASP SER LEU SER GLU GLU SEQRES 8 A 519 GLU LYS GLU LEU LEU ASN ARG ILE GLN VAL ASP SER SER SEQRES 9 A 519 ASN PRO LEU SER GLU LYS GLU LYS GLU PHE LEU LYS LYS SEQRES 10 A 519 LEU LYS LEU ASP ILE GLN PRO TYR ASP ILE ASN GLN ARG SEQRES 11 A 519 LEU GLN ASP THR GLY GLY LEU ILE ASP SER PRO SER ILE SEQRES 12 A 519 ASN LEU ASP VAL ARG LYS GLN TYR LYS ARG ASP ILE GLN SEQRES 13 A 519 ASN ILE ASP ALA LEU LEU HIS GLN SER ILE GLY SER THR SEQRES 14 A 519 LEU TYR ASN LYS ILE TYR LEU TYR GLU ASN MET ASN ILE SEQRES 15 A 519 ASN ASN LEU THR ALA THR LEU GLY ALA ASP LEU VAL ASP SEQRES 16 A 519 SER THR ASP ASN THR LYS ILE ASN ARG GLY ILE PHE ASN SEQRES 17 A 519 GLU PHE LYS LYS ASN PHE LYS TYR SER ILE SER SER ASN SEQRES 18 A 519 TYR MET ILE VAL ASP ILE ASN GLU ARG PRO ALA LEU ASP SEQRES 19 A 519 ASN GLU ARG LEU LYS TRP ARG ILE GLN LEU SER PRO ASP SEQRES 20 A 519 THR ARG ALA GLY TYR LEU GLU ASN GLY LYS LEU ILE LEU SEQRES 21 A 519 GLN ARG ASN ILE GLY LEU GLU ILE LYS ASP VAL GLN ILE SEQRES 22 A 519 ILE LYS GLN SER GLU LYS GLU TYR ILE ARG ILE ASP ALA SEQRES 23 A 519 LYS VAL VAL PRO LYS SER LYS ILE ASP THR LYS ILE GLN SEQRES 24 A 519 GLU ALA GLN LEU ASN ILE ASN GLN GLU TRP ASN LYS ALA SEQRES 25 A 519 LEU GLY LEU PRO LYS TYR THR LYS LEU ILE THR PHE ASN SEQRES 26 A 519 VAL HIS ASN ARG TYR ALA SER ASN ILE VAL GLU SER ALA SEQRES 27 A 519 TYR LEU ILE LEU ASN GLU TRP LYS ASN ASN ILE GLN SER SEQRES 28 A 519 ASP LEU ILE LYS LYS VAL THR ASN TYR LEU VAL ASP GLY SEQRES 29 A 519 ASN GLY ARG PHE VAL PHE THR ASP ILE THR LEU PRO ASN SEQRES 30 A 519 ILE ALA GLU GLN TYR THR HIS GLN ASP GLU ILE TYR GLU SEQRES 31 A 519 GLN VAL HIS SER LYS GLY LEU TYR VAL PRO GLU SER ARG SEQRES 32 A 519 SER ILE LEU LEU HIS GLY PRO SER LYS GLY VAL GLU LEU SEQRES 33 A 519 ARG ASN ASP SER GLU GLY PHE ILE HIS GLU PHE GLY HIS SEQRES 34 A 519 ALA VAL ASP ASP TYR ALA GLY TYR LEU LEU ASP LYS ASN SEQRES 35 A 519 GLN SER ASP LEU VAL THR ASN SER LYS LYS PHE ILE ASP SEQRES 36 A 519 ILE PHE LYS GLU GLU GLY SER ASN LEU THR SER TYR GLY SEQRES 37 A 519 ARG THR ASN GLU ALA GLU PHE PHE ALA GLU ALA PHE ARG SEQRES 38 A 519 LEU MET HIS SER THR ASP HIS ALA GLU ARG LEU LYS VAL SEQRES 39 A 519 GLN LYS ASN ALA PRO LYS THR PHE GLN PHE ILE ASN ASP SEQRES 40 A 519 GLN ILE LYS PHE ILE ILE ASN SER LEU VAL PRO ARG HET 30P A 801 26 HET ZN A 802 1 HETNAM 30P N~2~-(3-AMINOBENZYL)-N~2~-[(4-FLUORO-3-METHYLPHENYL) HETNAM 2 30P SULFONYL]-N-HYDROXY-D-ALANINAMIDE HETNAM ZN ZINC ION FORMUL 2 30P C17 H20 F N3 O4 S FORMUL 3 ZN ZN 2+ FORMUL 4 HOH *81(H2 O) HELIX 1 AA1 SER A 266 TYR A 278 1 13 HELIX 2 AA2 TYR A 278 SER A 284 1 7 HELIX 3 AA3 SER A 286 ILE A 298 1 13 HELIX 4 AA4 LYS A 303 LEU A 311 1 9 HELIX 5 AA5 SER A 312 ILE A 322 1 11 HELIX 6 AA6 GLN A 323 SER A 327 5 5 HELIX 7 AA7 SER A 331 ILE A 343 1 13 HELIX 8 AA8 SER A 369 ILE A 383 1 15 HELIX 9 AA9 ASP A 387 GLY A 396 1 10 HELIX 10 AB1 ASN A 405 LEU A 423 1 19 HELIX 11 AB2 ASN A 442 LEU A 446 5 5 HELIX 12 AB3 THR A 447 ALA A 452 1 6 HELIX 13 AB4 ASN A 464 ASN A 474 1 11 HELIX 14 AB5 PRO A 551 GLY A 575 1 25 HELIX 15 AB6 TYR A 591 ILE A 610 1 20 HELIX 16 AB7 GLN A 611 GLY A 625 1 15 HELIX 17 AB8 THR A 635 ASN A 638 5 4 HELIX 18 AB9 ILE A 639 THR A 644 1 6 HELIX 19 AC1 GLU A 648 GLN A 652 5 5 HELIX 20 AC2 ASN A 679 ASP A 701 1 23 HELIX 21 AC3 LEU A 707 ASN A 710 5 4 HELIX 22 AC4 SER A 711 GLY A 722 1 12 HELIX 23 AC5 SER A 727 THR A 731 5 5 HELIX 24 AC6 ASN A 732 HIS A 745 1 14 HELIX 25 AC7 ASP A 748 ALA A 759 1 12 HELIX 26 AC8 ALA A 759 SER A 776 1 18 SHEET 1 AA1 5 TYR A 436 MET A 441 0 SHEET 2 AA1 5 LEU A 499 GLN A 504 -1 O ILE A 503 N LEU A 437 SHEET 3 AA1 5 GLU A 541 VAL A 550 1 O ILE A 543 N LYS A 500 SHEET 4 AA1 5 ILE A 525 LYS A 536 -1 N ILE A 535 O TYR A 542 SHEET 5 AA1 5 TYR A 477 SER A 480 -1 N SER A 478 O LEU A 527 SHEET 1 AA2 3 ILE A 485 ASP A 487 0 SHEET 2 AA2 3 LYS A 518 LEU A 521 -1 O LEU A 519 N VAL A 486 SHEET 3 AA2 3 ALA A 511 LEU A 514 -1 N LEU A 514 O LYS A 518 SHEET 1 AA3 4 ILE A 583 ASN A 586 0 SHEET 2 AA3 4 PHE A 629 THR A 632 1 O PHE A 629 N THR A 584 SHEET 3 AA3 4 SER A 665 HIS A 669 1 O ILE A 666 N VAL A 630 SHEET 4 AA3 4 GLY A 657 VAL A 660 -1 N LEU A 658 O LEU A 667 LINK NE2 HIS A 686 ZN ZN A 802 1555 1555 2.48 LINK NE2 HIS A 690 ZN ZN A 802 1555 1555 2.47 LINK OE1 GLU A 735 ZN ZN A 802 1555 1555 2.44 LINK O5 30P A 801 ZN ZN A 802 1555 1555 2.08 LINK O3 30P A 801 ZN ZN A 802 1555 1555 2.08 SITE 1 AC1 17 ASP A 328 HIS A 654 SER A 655 LYS A 656 SITE 2 AC1 17 GLY A 657 VAL A 675 LEU A 677 HIS A 686 SITE 3 AC1 17 GLU A 687 HIS A 690 TYR A 728 GLU A 735 SITE 4 AC1 17 GLU A 739 ARG A 742 ZN A 802 HOH A 924 SITE 5 AC1 17 HOH A 968 SITE 1 AC2 5 HIS A 686 HIS A 690 GLU A 735 30P A 801 SITE 2 AC2 5 HOH A 968 CRYST1 61.337 67.895 143.358 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016303 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014729 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006976 0.00000 TER 3937 SER A 776 HETATM 3938 C21 30P A 801 7.879 15.360 23.716 1.00 71.34 C HETATM 3939 C20 30P A 801 8.554 16.119 24.667 1.00 64.56 C HETATM 3940 C22 30P A 801 7.011 14.352 24.119 1.00 76.94 C HETATM 3941 C23 30P A 801 6.820 14.103 25.472 1.00 70.08 C HETATM 3942 C24 30P A 801 7.498 14.860 26.421 1.00 63.64 C HETATM 3943 C19 30P A 801 8.363 15.875 26.026 1.00 61.98 C HETATM 3944 C18 30P A 801 9.088 16.664 27.104 1.00 56.05 C HETATM 3945 N6 30P A 801 9.632 17.953 26.685 1.00 57.72 N HETATM 3946 C1 30P A 801 11.080 18.017 26.468 1.00 51.52 C HETATM 3947 C28 30P A 801 11.633 16.741 25.839 1.00 45.63 C HETATM 3948 C2 30P A 801 11.862 18.282 27.724 1.00 49.64 C HETATM 3949 N4 30P A 801 12.734 19.292 27.756 1.00 44.38 N HETATM 3950 O5 30P A 801 13.634 19.297 28.751 1.00 46.54 O HETATM 3951 O3 30P A 801 11.755 17.475 28.929 1.00 47.60 O HETATM 3952 S7 30P A 801 8.749 19.181 26.521 1.00 64.79 S HETATM 3953 O8 30P A 801 7.486 18.779 25.969 1.00 52.56 O HETATM 3954 O9 30P A 801 9.393 20.122 25.651 1.00 52.37 O HETATM 3955 C10 30P A 801 8.523 19.874 27.943 1.00 56.27 C HETATM 3956 C15 30P A 801 9.234 21.024 28.268 1.00 48.05 C HETATM 3957 C14 30P A 801 9.047 21.634 29.502 1.00 49.57 C HETATM 3958 C13 30P A 801 8.149 21.092 30.415 1.00 52.90 C HETATM 3959 F16 30P A 801 7.963 21.681 31.609 1.00 47.23 F HETATM 3960 C12 30P A 801 7.440 19.947 30.094 1.00 54.40 C HETATM 3961 C11 30P A 801 7.627 19.335 28.859 1.00 52.11 C HETATM 3962 C17 30P A 801 6.468 19.364 31.085 1.00 50.53 C HETATM 3963 N1 30P A 801 8.078 15.621 22.264 1.00 68.68 N HETATM 3964 ZN ZN A 802 13.269 17.937 30.283 1.00 44.96 ZN HETATM 3965 O HOH A 901 20.748 12.730 -3.284 1.00 43.92 O HETATM 3966 O HOH A 902 7.622 7.231 43.671 1.00 46.90 O HETATM 3967 O HOH A 903 11.123 -7.596 6.336 1.00 85.69 O HETATM 3968 O HOH A 904 8.849 10.503 50.868 1.00 47.17 O HETATM 3969 O HOH A 905 12.760 8.351 55.482 1.00 42.85 O HETATM 3970 O HOH A 906 -11.004 25.645 -12.612 1.00 45.55 O HETATM 3971 O HOH A 907 17.892 7.645 3.385 1.00 53.62 O HETATM 3972 O HOH A 908 5.523 11.669 51.255 1.00 58.48 O HETATM 3973 O HOH A 909 4.347 -1.603 25.863 1.00 79.84 O HETATM 3974 O HOH A 910 5.912 32.234 0.321 1.00 36.97 O HETATM 3975 O HOH A 911 7.292 33.129 -12.021 1.00 46.36 O HETATM 3976 O HOH A 912 13.217 29.828 2.672 1.00 35.53 O HETATM 3977 O HOH A 913 17.228 20.196 2.769 1.00 36.73 O HETATM 3978 O HOH A 914 13.387 18.934 10.672 1.00 38.82 O HETATM 3979 O HOH A 915 2.149 27.500 21.285 1.00 45.47 O HETATM 3980 O HOH A 916 6.452 12.418 39.546 1.00 39.06 O HETATM 3981 O HOH A 917 0.731 14.517 35.229 1.00 57.38 O HETATM 3982 O HOH A 918 4.784 25.427 36.364 1.00 44.82 O HETATM 3983 O HOH A 919 13.109 18.198 8.336 1.00 40.98 O HETATM 3984 O HOH A 920 -9.310 31.677 1.358 1.00 45.22 O HETATM 3985 O HOH A 921 -14.869 30.519 24.916 1.00 66.56 O HETATM 3986 O HOH A 922 0.806 43.230 -14.069 1.00 66.28 O HETATM 3987 O HOH A 923 6.421 31.875 13.814 1.00 33.05 O HETATM 3988 O HOH A 924 16.109 19.020 27.999 1.00 42.63 O HETATM 3989 O HOH A 925 -20.597 24.928 14.048 1.00 82.43 O HETATM 3990 O HOH A 926 2.163 30.580 26.008 1.00 49.10 O HETATM 3991 O HOH A 927 -8.865 33.991 3.569 1.00 43.83 O HETATM 3992 O HOH A 928 21.320 26.006 5.450 1.00 43.82 O HETATM 3993 O HOH A 929 32.141 28.685 34.799 1.00 60.23 O HETATM 3994 O HOH A 930 15.764 15.528 12.992 1.00 40.16 O HETATM 3995 O HOH A 931 -13.062 36.802 -2.700 1.00 44.17 O HETATM 3996 O HOH A 932 -16.293 30.409 6.247 1.00 49.28 O HETATM 3997 O HOH A 933 13.837 33.365 -10.246 1.00 50.26 O HETATM 3998 O HOH A 934 13.027 17.343 -20.006 1.00 85.38 O HETATM 3999 O HOH A 935 23.140 19.750 2.393 1.00 56.40 O HETATM 4000 O HOH A 936 14.368 40.613 1.366 1.00 50.38 O HETATM 4001 O HOH A 937 -1.483 30.999 -16.518 1.00 43.85 O HETATM 4002 O HOH A 938 4.139 30.565 4.820 1.00 40.29 O HETATM 4003 O HOH A 939 -14.779 34.803 -2.870 1.00 53.32 O HETATM 4004 O HOH A 940 30.382 32.245 36.650 1.00 63.36 O HETATM 4005 O HOH A 941 11.456 31.535 -4.180 1.00 39.18 O HETATM 4006 O HOH A 942 18.333 11.064 34.532 1.00 44.55 O HETATM 4007 O HOH A 943 17.354 18.082 35.754 1.00 33.35 O HETATM 4008 O HOH A 944 21.479 39.034 27.305 1.00 58.38 O HETATM 4009 O HOH A 945 -3.725 45.288 -17.321 1.00 80.96 O HETATM 4010 O HOH A 946 5.387 20.735 0.076 1.00 41.99 O HETATM 4011 O HOH A 947 11.653 39.370 0.454 1.00 42.49 O HETATM 4012 O HOH A 948 8.836 16.156 -9.492 1.00 56.77 O HETATM 4013 O HOH A 949 17.912 48.854 21.744 1.00 58.46 O HETATM 4014 O HOH A 950 28.781 30.852 38.477 1.00 58.54 O HETATM 4015 O HOH A 951 12.816 18.816 -11.268 1.00 60.13 O HETATM 4016 O HOH A 952 -15.765 33.278 2.460 1.00 56.65 O HETATM 4017 O HOH A 953 18.130 36.244 45.637 1.00 51.10 O HETATM 4018 O HOH A 954 3.521 17.391 -13.749 1.00 78.33 O HETATM 4019 O HOH A 955 2.653 10.190 38.457 1.00 62.18 O HETATM 4020 O HOH A 956 6.381 18.000 -1.570 1.00 43.17 O HETATM 4021 O HOH A 957 1.463 28.939 3.735 1.00 44.80 O HETATM 4022 O HOH A 958 11.988 32.900 -6.776 1.00 47.63 O HETATM 4023 O HOH A 959 6.921 36.025 43.092 1.00 65.41 O HETATM 4024 O HOH A 960 -2.034 22.465 42.897 1.00 73.36 O HETATM 4025 O HOH A 961 13.038 33.640 -3.224 1.00 48.80 O HETATM 4026 O HOH A 962 4.556 29.426 10.006 1.00 38.26 O HETATM 4027 O HOH A 963 4.912 29.125 12.650 1.00 37.71 O HETATM 4028 O HOH A 964 3.112 26.593 25.854 1.00 50.41 O HETATM 4029 O HOH A 965 -11.883 43.357 8.951 1.00 50.90 O HETATM 4030 O HOH A 966 -13.544 41.229 6.428 1.00 52.05 O HETATM 4031 O HOH A 967 15.196 32.963 -1.834 1.00 48.34 O HETATM 4032 O HOH A 968 15.161 16.820 28.624 1.00 42.20 O HETATM 4033 O HOH A 969 3.294 15.094 33.274 1.00 46.22 O HETATM 4034 O HOH A 970 27.531 21.864 30.840 1.00 44.20 O HETATM 4035 O HOH A 971 30.711 21.467 29.100 1.00 59.84 O HETATM 4036 O HOH A 972 29.410 25.152 25.936 1.00 57.06 O HETATM 4037 O HOH A 973 34.803 32.042 30.170 1.00 65.11 O HETATM 4038 O HOH A 974 1.906 22.933 0.690 1.00 44.18 O HETATM 4039 O HOH A 975 17.013 39.149 38.547 1.00 54.87 O HETATM 4040 O HOH A 976 -1.071 45.274 14.095 1.00 67.31 O HETATM 4041 O HOH A 977 13.738 32.586 6.790 1.00 50.92 O HETATM 4042 O HOH A 978 13.998 35.468 9.155 1.00 52.58 O HETATM 4043 O HOH A 979 3.006 10.660 8.843 1.00 64.29 O HETATM 4044 O HOH A 980 8.765 45.299 23.156 1.00 57.46 O HETATM 4045 O HOH A 981 35.159 20.902 43.648 1.00 62.38 O CONECT 3207 3964 CONECT 3241 3964 CONECT 3590 3964 CONECT 3938 3939 3940 3963 CONECT 3939 3938 3943 CONECT 3940 3938 3941 CONECT 3941 3940 3942 CONECT 3942 3941 3943 CONECT 3943 3939 3942 3944 CONECT 3944 3943 3945 CONECT 3945 3944 3946 3952 CONECT 3946 3945 3947 3948 CONECT 3947 3946 CONECT 3948 3946 3949 3951 CONECT 3949 3948 3950 CONECT 3950 3949 3964 CONECT 3951 3948 3964 CONECT 3952 3945 3953 3954 3955 CONECT 3953 3952 CONECT 3954 3952 CONECT 3955 3952 3956 3961 CONECT 3956 3955 3957 CONECT 3957 3956 3958 CONECT 3958 3957 3959 3960 CONECT 3959 3958 CONECT 3960 3958 3961 3962 CONECT 3961 3955 3960 CONECT 3962 3960 CONECT 3963 3938 CONECT 3964 3207 3241 3590 3950 CONECT 3964 3951 MASTER 359 0 2 26 12 0 7 6 4044 1 31 40 END