HEADER HYDROLASE 24-FEB-14 4PO3 TITLE CRYSTAL STRUCTURE OF A C4-C4 SN3 TRIBUTYRIN PHOSPHONATE INHIBITED BY TITLE 2 ESTERASE B FROM LACTOBACILLUS RHAMNOSIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: ESTERASE B; COMPND 3 CHAIN: X; COMPND 4 SYNONYM: ESTERASE/LIPASE; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOBACILLUS RHAMNOSUS; SOURCE 3 ORGANISM_TAXID: 486408; SOURCE 4 STRAIN: HN001; SOURCE 5 GENE: LRH_10360; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PGEX 6P3; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX_6P3_ESTB KEYWDS ESTERASE/LIPASE, TRIACYLGLYCERASE, HYDROLYSIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.D.BENNETT,B.F.ANDERSON,G.E.NORRIS,D.A.COLBERT REVDAT 2 20-SEP-23 4PO3 1 REMARK SEQADV LINK REVDAT 1 11-JUN-14 4PO3 0 JRNL AUTH M.D.BENNETT,D.A.COLBERT,B.F.ANDERSON,G.E.NORRIS JRNL TITL CRYSTAL STRUCTURE OF A C4-C4 SN3 TRIBUTYRIN PHODPHONATE JRNL TITL 2 INHIBITED ESTERASE B FROM LACTOBACILLUS RHAMNOSIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.96 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.96 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 38.84 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 24173 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.208 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 1249 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.96 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.01 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1796 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2380 REMARK 3 BIN FREE R VALUE SET COUNT : 89 REMARK 3 BIN FREE R VALUE : 0.2760 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2450 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 19 REMARK 3 SOLVENT ATOMS : 191 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.146 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.138 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.670 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.938 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2551 ; 0.019 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2346 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3466 ; 1.864 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5382 ; 0.904 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 313 ; 6.352 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 132 ;35.136 ;24.545 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 399 ;14.136 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;21.221 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 366 ; 0.121 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2950 ; 0.011 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 624 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4PO3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000085009. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-002 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CAPILLARY FOCUSING OPTICS AND REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSTALCLEAR REMARK 200 DATA SCALING SOFTWARE : CRYSTALCLEAR REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24173 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.440 REMARK 200 RESOLUTION RANGE LOW (A) : 38.840 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 89.2 REMARK 200 DATA REDUNDANCY : 3.730 REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.44 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 25.5 REMARK 200 DATA REDUNDANCY IN SHELL : 1.26 REMARK 200 R MERGE FOR SHELL (I) : 0.43300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 4N5H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 AMMONIUM PHOSPHATE, 0.1M TRISHCL, REMARK 280 PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 54.92650 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.92650 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 29.66750 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 54.92650 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.92650 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 29.66750 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 54.92650 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 54.92650 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 29.66750 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 54.92650 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 54.92650 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 29.66750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH X 660 LIES ON A SPECIAL POSITION. REMARK 375 HOH X 678 LIES ON A SPECIAL POSITION. REMARK 375 HOH X 689 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET X 1 REMARK 465 GLU X 194 REMARK 465 ALA X 195 REMARK 465 ALA X 196 REMARK 465 GLY X 197 REMARK 465 ASP X 198 REMARK 465 PHE X 316 REMARK 465 GLU X 317 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU X 5 CD OE1 OE2 REMARK 470 LYS X 60 CD CE NZ REMARK 470 ARG X 62 CD NE CZ NH1 NH2 REMARK 470 LEU X 192 CD1 REMARK 470 LYS X 277 NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND1 HIS X 284 O HOH X 616 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP X 37 CE3 TRP X 37 CZ3 0.108 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP X 28 CB - CG - OD2 ANGL. DEV. = -5.5 DEGREES REMARK 500 ARG X 86 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG X 90 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG X 124 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP X 3 132.74 169.59 REMARK 500 ASP X 34 38.37 71.63 REMARK 500 GLN X 51 52.08 -93.61 REMARK 500 TRP X 77 -12.76 68.59 REMARK 500 SER X 146 -119.08 60.28 REMARK 500 ASN X 174 46.79 -87.19 REMARK 500 CYS X 184 55.67 36.58 REMARK 500 VAL X 186 70.96 -105.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HY4 X 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4N5H RELATED DB: PDB REMARK 900 SAME PROTEIN REMARK 900 RELATED ID: 4N5I RELATED DB: PDB REMARK 900 SAME PROTEIN REMARK 900 RELATED ID: 4OUK RELATED DB: PDB DBREF 4PO3 X 1 317 UNP B2CZF4 B2CZF4_LACRH 1 317 SEQADV 4PO3 VAL X 218 UNP B2CZF4 ALA 218 ENGINEERED MUTATION SEQRES 1 X 317 MET ALA ASP GLU GLU ALA MET LEU ALA LYS VAL GLN ALA SEQRES 2 X 317 SER TRP ALA GLN THR ALA ALA ARG ASP LYS ALA ARG TYR SEQRES 3 X 317 ALA ASP GLU ARG VAL PRO GLU ASP VAL HIS TRP GLU THR SEQRES 4 X 317 GLU TYR ARG TYR GLU GLN SER ALA ASP PRO GLN GLN THR SEQRES 5 X 317 LEU ASN LEU TYR TYR PRO ALA LYS ARG ARG ASN ALA THR SEQRES 6 X 317 MET PRO THR VAL ILE ASP ILE HIS GLY GLY GLY TRP PHE SEQRES 7 X 317 TYR GLY ASP ARG ASN LEU ASN ARG ASN TYR CYS ARG TYR SEQRES 8 X 317 LEU ALA SER GLN GLY TYR ALA VAL MET GLY MET GLY TYR SEQRES 9 X 317 ARG LEU LEU PRO ASP VAL ASP LEU ARG GLY GLN ILE GLN SEQRES 10 X 317 ASP ILE PHE ALA SER LEU ARG TRP LEU SER HIS PHE GLY SEQRES 11 X 317 PRO GLN ARG GLY PHE ASP LEU ASP HIS VAL LEU LEU THR SEQRES 12 X 317 GLY ASP SER ALA GLY GLY HIS LEU ALA SER LEU VAL ALA SEQRES 13 X 317 CYS ILE GLN GLN SER ALA GLU LEU GLN GLU LEU PHE GLY SEQRES 14 X 317 VAL SER ARG VAL ASN PHE ASN PHE THR LEU VAL ALA LEU SEQRES 15 X 317 VAL CYS PRO VAL ALA GLU PRO SER LYS LEU PRO GLU ALA SEQRES 16 X 317 ALA GLY ASP MET SER ASP MET ALA ALA PHE TYR LEU ASP SEQRES 17 X 317 LYS LEU SER GLY GLY ASP GLN ALA LEU VAL ASP HIS LEU SEQRES 18 X 317 ASN PHE SER GLN VAL VAL LYS GLY LEU ASP LEU PRO PRO SEQRES 19 X 317 PHE MET LEU ILE GLY GLY GLN ASN ASP SER PHE TYR LEU SEQRES 20 X 317 GLN SER GLN ALA LEU LEU LYS VAL PHE ASP ALA ASN HIS SEQRES 21 X 317 VAL THR TYR THR THR LYS LEU TRP PRO ALA SER ALA GLY SEQRES 22 X 317 PRO HIS LEU LYS HIS VAL PHE ASN VAL GLN HIS TRP GLU SEQRES 23 X 317 TRP PRO GLU SER ILE GLU THR ASN LEU GLU MET LEU ARG SEQRES 24 X 317 THR PHE ASP ALA LEU SER LYS GLN GLN ASP GLN ALA GLU SEQRES 25 X 317 GLU ASN GLU PHE GLU HET HY4 X 401 19 HETNAM HY4 (2R)-2,3-DIBUTOXYPROPYL HYDROGEN (S)-PROPYLPHOSPHONATE FORMUL 2 HY4 C14 H31 O5 P FORMUL 3 HOH *191(H2 O) HELIX 1 1 ASP X 3 GLU X 29 1 27 HELIX 2 2 ASN X 85 GLN X 95 1 11 HELIX 3 3 ASP X 111 GLY X 130 1 20 HELIX 4 4 PRO X 131 ARG X 133 5 3 HELIX 5 5 SER X 146 SER X 161 1 16 HELIX 6 6 SER X 161 GLY X 169 1 9 HELIX 7 7 GLU X 188 LEU X 192 5 5 HELIX 8 8 SER X 200 GLY X 212 1 13 HELIX 9 9 ASP X 214 ASP X 219 1 6 HELIX 10 10 ASN X 222 VAL X 227 1 6 HELIX 11 11 PHE X 245 ASN X 259 1 15 HELIX 12 12 PRO X 269 GLY X 273 5 5 HELIX 13 13 VAL X 279 HIS X 284 1 6 HELIX 14 14 TRP X 287 GLU X 312 1 26 SHEET 1 A 8 VAL X 35 ARG X 42 0 SHEET 2 A 8 THR X 52 PRO X 58 -1 O LEU X 55 N GLU X 38 SHEET 3 A 8 ALA X 98 MET X 102 -1 O VAL X 99 N TYR X 56 SHEET 4 A 8 MET X 66 ILE X 72 1 N ASP X 71 O MET X 100 SHEET 5 A 8 PHE X 135 ASP X 145 1 O THR X 143 N ILE X 70 SHEET 6 A 8 LEU X 179 VAL X 183 1 O VAL X 183 N GLY X 144 SHEET 7 A 8 PHE X 235 GLY X 240 1 O MET X 236 N LEU X 182 SHEET 8 A 8 TYR X 263 TRP X 268 1 O TRP X 268 N GLY X 239 LINK OG SER X 146 P13 HY4 X 401 1555 1555 1.61 CISPEP 1 LEU X 107 PRO X 108 0 7.95 SITE 1 AC1 9 SER X 14 TRP X 15 GLY X 75 GLY X 76 SITE 2 AC1 9 SER X 146 ALA X 147 TYR X 206 PHE X 245 SITE 3 AC1 9 HIS X 278 CRYST1 109.853 109.853 59.335 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009103 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009103 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016853 0.00000