HEADER HYDROLASE 25-FEB-14 4POA TITLE MYCOBACTERIUM TUBERCULOSIS RECA GLYCEROL BOUND LOW TEMPERATURE TITLE 2 STRUCTURE IIC-BN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN RECA, 1ST PART, 2ND PART; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: RECOMBINASE A; COMPND 5 EC: 3.1.-.-; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM TUBERCULOSIS; SOURCE 3 ORGANISM_TAXID: 1773; SOURCE 4 GENE: MT2806, MTV002.02C, RECA, RV2737C; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: KM4104; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PEJ135 KEYWDS HOMOLOGOUS RECOMBINATION, DNA REPAIR, ATPASE, RECOMBINASE, DNA KEYWDS 2 BINDING PROTEIN, ATP BINDING, HYDROLYSIS, PLOOP CONTAINING NTPASE KEYWDS 3 FOLD, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR A.V.CHANDRAN,J.R.PRABU,N.K.PATIL,K.MUNIYAPPA,M.VIJAYAN REVDAT 3 08-NOV-23 4POA 1 REMARK REVDAT 2 16-AUG-17 4POA 1 SOURCE REMARK REVDAT 1 18-MAR-15 4POA 0 JRNL AUTH A.V.CHANDRAN,J.R.PRABU,A.NAUTIYAL,K.N.PATIL,K.MUNIYAPPA, JRNL AUTH 2 M.VIJAYAN JRNL TITL STRUCTURAL STUDIES ON MYCOBACTERIUM TUBERCULOSIS RECA: JRNL TITL 2 MOLECULAR PLASTICITY AND INTERSPECIES VARIABILITY JRNL REF J.BIOSCI. V. 40 13 2015 JRNL REFN ISSN 0250-4774 JRNL PMID 25740138 JRNL DOI 10.1007/S12038-014-9497-X REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH J.R.PRABU,G.P.MANJUNATH,N.R.CHANDRA,K.MUNIYAPPA,M.VIJAYAN REMARK 1 TITL FUNCTIONALLY IMPORTANT MOVEMENTS IN RECA MOLECULES AND REMARK 1 TITL 2 FILAMENTS: STUDIES INVOLVING MUTATION AND ENVIRONMENTAL REMARK 1 TITL 3 CHANGES REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. 64 1146 2008 REMARK 1 REFN ISSN 0907-4449 REMARK 1 PMID 19020353 REMARK 1 DOI 10.1107/S0907444908028448 REMARK 1 REFERENCE 2 REMARK 1 AUTH R.KRISHNA,G.P.MANJUNATH,P.KUMAR,A.SUROLIA,N.R.CHANDRA, REMARK 1 AUTH 2 K.MUNIYAPPA,M.VIJAYAN REMARK 1 TITL CRYSTALLOGRAPHIC IDENTIFICATION OF AN ORDERED C-TERMINAL REMARK 1 TITL 2 DOMAIN AND A SECOND NUCLEOTIDE-BINDING SITE IN RECA: NEW REMARK 1 TITL 3 INSIGHTS INTO ALLOSTERY REMARK 1 REF NUCLEIC ACIDS RES. V. 34 2186 2006 REMARK 1 REFN ISSN 0305-1048 REMARK 1 PMID 16648362 REMARK 1 DOI 10.1093/NAR/GKL107 REMARK 1 REFERENCE 3 REMARK 1 AUTH S.DATTA,R.KRISHNA,N.GANESH,N.R.CHANDRA,K.MUNIYAPPA,M.VIJAYAN REMARK 1 TITL CRYSTAL STRUCTURES OF MYCOBACTERIUM SMEGMATIS RECA AND ITS REMARK 1 TITL 2 NUCLEOTIDE COMPLEXES REMARK 1 REF J.BACTERIOL. V. 185 4280 2003 REMARK 1 REFN ISSN 0021-9193 REMARK 1 PMID 12837805 REMARK 1 DOI 10.1128/JB.185.14.4280-4284.2003 REMARK 1 REFERENCE 4 REMARK 1 AUTH S.DATTA,N.GANESH,N.R.CHANDRA,K.MUNIYAPPA,M.VIJAYAN REMARK 1 TITL STRUCTURAL STUDIES ON MTRECA-NUCLEOTIDE COMPLEXES: INSIGHTS REMARK 1 TITL 2 INTO DNA AND NUCLEOTIDE BINDING AND THE STRUCTURAL SIGNATURE REMARK 1 TITL 3 OF NTP RECOGNITION REMARK 1 REF PROTEINS V. 50 474 2003 REMARK 1 REFN ISSN 0887-3585 REMARK 1 PMID 12557189 REMARK 1 DOI 10.1002/PROT.10315 REMARK 1 REFERENCE 5 REMARK 1 AUTH S.DATTA,M.M.PRABU,M.B.VAZE,N.GANESH,N.R.CHANDRA,K.MUNIYAPPA, REMARK 1 AUTH 2 M.VIJAYAN REMARK 1 TITL CRYSTAL STRUCTURES OF MYCOBACTERIUM TUBERCULOSIS RECA AND REMARK 1 TITL 2 ITS COMPLEX WITH ADP-ALF(4): IMPLICATIONS FOR DECREASED REMARK 1 TITL 3 ATPASE ACTIVITY AND MOLECULAR AGGREGATION REMARK 1 REF NUCLEIC ACIDS RES. V. 28 4964 2000 REMARK 1 REFN ISSN 0305-1048 REMARK 1 PMID 11121488 REMARK 1 DOI 10.1093/NAR/28.24.4964 REMARK 2 REMARK 2 RESOLUTION. 2.95 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.95 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 8865 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.199 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.900 REMARK 3 FREE R VALUE TEST SET COUNT : 974 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.95 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 622 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 78 REMARK 3 BIN FREE R VALUE : 0.3620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2184 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 41 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 42.50 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.21 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.45000 REMARK 3 B22 (A**2) : -0.45000 REMARK 3 B33 (A**2) : 1.47000 REMARK 3 B12 (A**2) : -0.45000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.383 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.262 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.953 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.928 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.871 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2219 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2127 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2995 ; 1.036 ; 1.983 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4865 ; 0.703 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 306 ; 5.124 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 83 ;36.316 ;25.663 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 352 ;15.732 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;18.852 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 354 ; 0.054 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2583 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 448 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4POA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 05-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000085016. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54179 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9860 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.950 REMARK 200 RESOLUTION RANGE LOW (A) : 71.040 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : 11.50 REMARK 200 R MERGE (I) : 0.19600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.95 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.11 REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : 11.30 REMARK 200 R MERGE FOR SHELL (I) : 0.87100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1G19 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 3350, 10% PEG 5000 MME, 0.2M REMARK 280 AMMONIUM ACETATE, 0.1M SODIUM CITRATE, PH 5.8, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 23.68000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 47.36000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 35.52000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.20000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 11.84000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 GLN A 3 REMARK 465 MET A 160 REMARK 465 GLY A 161 REMARK 465 ASP A 162 REMARK 465 SER A 163 REMARK 465 ARG A 197 REMARK 465 ASP A 198 REMARK 465 LYS A 199 REMARK 465 ILE A 200 REMARK 465 GLY A 201 REMARK 465 VAL A 202 REMARK 465 MET A 203 REMARK 465 PHE A 204 REMARK 465 GLY A 205 REMARK 465 SER A 206 REMARK 465 PRO A 207 REMARK 465 GLU A 208 REMARK 465 THR A 209 REMARK 465 THR A 210 REMARK 465 GLY A 331 REMARK 465 ALA A 332 REMARK 465 VAL A 333 REMARK 465 VAL A 334 REMARK 465 THR A 335 REMARK 465 ASP A 336 REMARK 465 ASP A 337 REMARK 465 PRO A 338 REMARK 465 SER A 339 REMARK 465 ASN A 340 REMARK 465 ASP A 341 REMARK 465 GLY A 342 REMARK 465 VAL A 343 REMARK 465 LEU A 344 REMARK 465 PRO A 345 REMARK 465 ALA A 346 REMARK 465 PRO A 347 REMARK 465 VAL A 348 REMARK 465 ASP A 349 REMARK 465 PHE A 350 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 4 CB OG1 CG2 REMARK 470 PRO A 5 CB CG CD REMARK 470 ARG A 7 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 8 CG CD OE1 OE2 REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 GLU A 12 CG CD OE1 OE2 REMARK 470 LYS A 20 CG CD CE NZ REMARK 470 LYS A 24 CG CD CE NZ REMARK 470 ARG A 35 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 153 NE CZ NH1 NH2 REMARK 470 GLU A 159 CG CD OE1 OE2 REMARK 470 HIS A 164 CB CG ND1 CD2 CE1 NE2 REMARK 470 VAL A 165 CB CG1 CG2 REMARK 470 ARG A 170 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 177 NE CZ NH1 NH2 REMARK 470 LYS A 214 CD CE NZ REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 ASP A 234 CB CG OD1 OD2 REMARK 470 THR A 236 CB OG1 CG2 REMARK 470 ALA A 238 CB REMARK 470 VAL A 239 CG1 CG2 REMARK 470 LYS A 257 NZ REMARK 470 TYR A 265 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 ARG A 286 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 287 CG CD CE NZ REMARK 470 PHE A 292 CD1 CD2 CE1 CE2 CZ REMARK 470 LYS A 303 CG CD CE NZ REMARK 470 GLU A 304 CG CD OE1 OE2 REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 LYS A 323 CG CD CE NZ REMARK 470 LYS A 327 NZ REMARK 470 ILE A 330 CG1 CG2 CD1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 119 79.61 -118.54 REMARK 500 VAL A 229 -65.23 -96.08 REMARK 500 THR A 236 -21.33 101.54 REMARK 500 ALA A 238 73.83 71.69 REMARK 500 SER A 253 151.83 170.86 REMARK 500 LYS A 287 59.61 -140.46 REMARK 500 SER A 288 90.73 -66.63 REMARK 500 LEU A 328 -162.31 -101.68 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4OQF RELATED DB: PDB REMARK 900 RELATED ID: 4PO1 RELATED DB: PDB REMARK 900 RELATED ID: 4PO8 RELATED DB: PDB REMARK 900 RELATED ID: 4PO9 RELATED DB: PDB REMARK 900 RELATED ID: 4PPF RELATED DB: PDB REMARK 900 RELATED ID: 4PPG RELATED DB: PDB REMARK 900 RELATED ID: 4PPN RELATED DB: PDB REMARK 900 RELATED ID: 4PPQ RELATED DB: PDB REMARK 900 RELATED ID: 4PQF RELATED DB: PDB REMARK 900 RELATED ID: 4PQR RELATED DB: PDB REMARK 900 RELATED ID: 4PQY RELATED DB: PDB REMARK 900 RELATED ID: 4PR0 RELATED DB: PDB REMARK 900 RELATED ID: 4PSA RELATED DB: PDB REMARK 900 RELATED ID: 4PSK RELATED DB: PDB REMARK 900 RELATED ID: 4PSV RELATED DB: PDB REMARK 900 RELATED ID: 4PTL RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE PROTEIN IS EXPRESSED AS A 790 AMINO ACID RESIDUE PRECURSOR REMARK 999 (UNIPROT P0A5U4). ONCE IT IS RELEASED INTO THE CELL, THE CHAIN MTU REMARK 999 RECA INTEIN (RESIDUES 252-691) IS CLEAVED OFF, CHAINS 1ST PART REMARK 999 (RESIDUES 1-251) AND 2ND PART (RESIDUES 692-790) JOIN TOGETHER TO REMARK 999 FORM THE MATURE PROTEIN. DBREF 4POA A 1 251 UNP P0A5U4 RECA_MYCTU 1 251 DBREF 4POA A 252 350 UNP P0A5U4 RECA_MYCTU 692 790 SEQRES 1 A 350 MET THR GLN THR PRO ASP ARG GLU LYS ALA LEU GLU LEU SEQRES 2 A 350 ALA VAL ALA GLN ILE GLU LYS SER TYR GLY LYS GLY SER SEQRES 3 A 350 VAL MET ARG LEU GLY ASP GLU ALA ARG GLN PRO ILE SER SEQRES 4 A 350 VAL ILE PRO THR GLY SER ILE ALA LEU ASP VAL ALA LEU SEQRES 5 A 350 GLY ILE GLY GLY LEU PRO ARG GLY ARG VAL ILE GLU ILE SEQRES 6 A 350 TYR GLY PRO GLU SER SER GLY LYS THR THR VAL ALA LEU SEQRES 7 A 350 HIS ALA VAL ALA ASN ALA GLN ALA ALA GLY GLY VAL ALA SEQRES 8 A 350 ALA PHE ILE ASP ALA GLU HIS ALA LEU ASP PRO ASP TYR SEQRES 9 A 350 ALA LYS LYS LEU GLY VAL ASP THR ASP SER LEU LEU VAL SEQRES 10 A 350 SER GLN PRO ASP THR GLY GLU GLN ALA LEU GLU ILE ALA SEQRES 11 A 350 ASP MET LEU ILE ARG SER GLY ALA LEU ASP ILE VAL VAL SEQRES 12 A 350 ILE ASP SER VAL ALA ALA LEU VAL PRO ARG ALA GLU LEU SEQRES 13 A 350 GLU GLY GLU MET GLY ASP SER HIS VAL GLY LEU GLN ALA SEQRES 14 A 350 ARG LEU MET SER GLN ALA LEU ARG LYS MET THR GLY ALA SEQRES 15 A 350 LEU ASN ASN SER GLY THR THR ALA ILE PHE ILE ASN GLN SEQRES 16 A 350 LEU ARG ASP LYS ILE GLY VAL MET PHE GLY SER PRO GLU SEQRES 17 A 350 THR THR THR GLY GLY LYS ALA LEU LYS PHE TYR ALA SER SEQRES 18 A 350 VAL ARG MET ASP VAL ARG ARG VAL GLU THR LEU LYS ASP SEQRES 19 A 350 GLY THR ASN ALA VAL GLY ASN ARG THR ARG VAL LYS VAL SEQRES 20 A 350 VAL LYS ASN LYS CYS SER PRO PRO PHE LYS GLN ALA GLU SEQRES 21 A 350 PHE ASP ILE LEU TYR GLY LYS GLY ILE SER ARG GLU GLY SEQRES 22 A 350 SER LEU ILE ASP MET GLY VAL ASP GLN GLY LEU ILE ARG SEQRES 23 A 350 LYS SER GLY ALA TRP PHE THR TYR GLU GLY GLU GLN LEU SEQRES 24 A 350 GLY GLN GLY LYS GLU ASN ALA ARG ASN PHE LEU VAL GLU SEQRES 25 A 350 ASN ALA ASP VAL ALA ASP GLU ILE GLU LYS LYS ILE LYS SEQRES 26 A 350 GLU LYS LEU GLY ILE GLY ALA VAL VAL THR ASP ASP PRO SEQRES 27 A 350 SER ASN ASP GLY VAL LEU PRO ALA PRO VAL ASP PHE HET EDO A 401 4 HET EDO A 402 4 HET GOL A 403 6 HET EDO A 404 4 HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 EDO 3(C2 H6 O2) FORMUL 4 GOL C3 H8 O3 FORMUL 6 HOH *41(H2 O) HELIX 1 1 THR A 4 GLY A 23 1 20 HELIX 2 2 SER A 45 LEU A 52 1 8 HELIX 3 3 GLY A 72 ALA A 87 1 16 HELIX 4 4 ASP A 101 GLY A 109 1 9 HELIX 5 5 ASP A 111 LEU A 115 5 5 HELIX 6 6 THR A 122 ARG A 135 1 14 HELIX 7 7 PRO A 152 GLU A 157 1 6 HELIX 8 8 GLY A 166 GLY A 187 1 22 HELIX 9 9 ALA A 215 ALA A 220 1 6 HELIX 10 10 SER A 270 GLN A 282 1 13 HELIX 11 11 GLY A 302 ASN A 313 1 12 HELIX 12 12 ASN A 313 LEU A 328 1 16 SHEET 1 A 9 LEU A 116 SER A 118 0 SHEET 2 A 9 ALA A 91 ASP A 95 1 N ASP A 95 O SER A 118 SHEET 3 A 9 ILE A 141 ASP A 145 1 O ASP A 145 N ILE A 94 SHEET 4 A 9 THR A 189 ASN A 194 1 O ILE A 191 N ILE A 144 SHEET 5 A 9 VAL A 62 TYR A 66 1 N ILE A 63 O ALA A 190 SHEET 6 A 9 VAL A 222 THR A 231 1 O VAL A 226 N TYR A 66 SHEET 7 A 9 ASN A 241 ASN A 250 -1 O ARG A 244 N ARG A 227 SHEET 8 A 9 GLN A 258 LEU A 264 -1 O PHE A 261 N THR A 243 SHEET 9 A 9 GLY A 268 ILE A 269 -1 O GLY A 268 N LEU A 264 SHEET 1 B 2 TRP A 291 TYR A 294 0 SHEET 2 B 2 GLU A 297 GLN A 301 -1 O LEU A 299 N PHE A 292 CISPEP 1 ASP A 145 SER A 146 0 -0.28 SITE 1 AC1 5 PRO A 42 GLY A 44 ILE A 46 ASP A 49 SITE 2 AC1 5 ARG A 271 SITE 1 AC2 3 PRO A 102 PRO A 255 HOH A 526 SITE 1 AC3 6 SER A 70 SER A 71 GLY A 72 LYS A 73 SITE 2 AC3 6 THR A 74 THR A 75 SITE 1 AC4 1 GLU A 260 CRYST1 106.810 106.810 71.040 90.00 90.00 120.00 P 61 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009362 0.005405 0.000000 0.00000 SCALE2 0.000000 0.010811 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014077 0.00000 TER 2185 ILE A 330 HETATM 2186 C1 EDO A 401 27.059 35.586 -7.853 1.00 54.26 C HETATM 2187 O1 EDO A 401 25.948 36.299 -8.426 1.00 53.33 O HETATM 2188 C2 EDO A 401 26.958 35.530 -6.325 1.00 54.52 C HETATM 2189 O2 EDO A 401 26.738 34.190 -5.845 1.00 52.17 O HETATM 2190 C1 EDO A 402 8.110 38.666 2.486 1.00 50.27 C HETATM 2191 O1 EDO A 402 8.260 37.258 2.716 1.00 48.25 O HETATM 2192 C2 EDO A 402 7.230 38.900 1.263 1.00 51.45 C HETATM 2193 O2 EDO A 402 7.402 37.827 0.325 1.00 53.62 O HETATM 2194 C1 GOL A 403 20.197 18.562 -10.234 1.00 53.68 C HETATM 2195 O1 GOL A 403 21.373 19.297 -10.607 1.00 51.10 O HETATM 2196 C2 GOL A 403 20.269 18.075 -8.784 1.00 52.78 C HETATM 2197 O2 GOL A 403 20.170 19.184 -7.893 1.00 50.50 O HETATM 2198 C3 GOL A 403 19.133 17.101 -8.487 1.00 53.30 C HETATM 2199 O3 GOL A 403 19.204 16.542 -7.171 1.00 55.05 O HETATM 2200 C1 EDO A 404 14.197 36.901 -10.453 1.00 57.63 C HETATM 2201 O1 EDO A 404 14.349 36.435 -9.111 1.00 55.41 O HETATM 2202 C2 EDO A 404 14.472 38.398 -10.501 1.00 59.83 C HETATM 2203 O2 EDO A 404 13.665 38.992 -11.526 1.00 65.10 O HETATM 2204 O HOH A 501 26.107 16.159 -9.531 1.00 20.67 O HETATM 2205 O HOH A 502 19.433 20.475 -13.005 1.00 25.57 O HETATM 2206 O HOH A 503 6.888 23.060 3.427 1.00 12.55 O HETATM 2207 O HOH A 504 5.689 20.158 10.569 1.00 42.08 O HETATM 2208 O HOH A 505 11.320 42.627 15.114 1.00 29.34 O HETATM 2209 O HOH A 506 31.499 41.483 -5.650 1.00 39.76 O HETATM 2210 O HOH A 507 37.565 30.385 5.608 1.00 26.28 O HETATM 2211 O HOH A 508 16.577 8.297 -2.251 1.00 38.90 O HETATM 2212 O HOH A 509 9.033 21.962 -16.710 1.00 25.65 O HETATM 2213 O HOH A 510 29.112 30.407 13.965 1.00 28.10 O HETATM 2214 O HOH A 511 36.096 27.302 9.568 1.00 36.80 O HETATM 2215 O HOH A 512 28.158 39.907 -26.726 1.00 38.86 O HETATM 2216 O HOH A 513 11.664 46.731 -6.762 1.00 39.17 O HETATM 2217 O HOH A 514 10.922 13.247 15.341 1.00 51.55 O HETATM 2218 O HOH A 515 8.650 23.601 -19.752 1.00 41.25 O HETATM 2219 O HOH A 516 44.381 17.268 -3.154 1.00 33.51 O HETATM 2220 O HOH A 517 41.413 19.212 1.227 1.00 29.59 O HETATM 2221 O HOH A 518 27.625 25.835 21.782 1.00 30.33 O HETATM 2222 O HOH A 519 11.577 19.885 -10.410 1.00 24.99 O HETATM 2223 O HOH A 520 9.246 31.607 -14.864 1.00 24.79 O HETATM 2224 O HOH A 521 10.744 44.709 -8.441 1.00 26.86 O HETATM 2225 O HOH A 522 13.676 41.544 -5.249 1.00 36.87 O HETATM 2226 O HOH A 523 17.297 35.262 -25.526 1.00 28.93 O HETATM 2227 O HOH A 524 26.922 33.748 8.091 1.00 20.43 O HETATM 2228 O HOH A 525 14.872 38.031 -5.015 1.00 27.33 O HETATM 2229 O HOH A 526 38.924 15.190 -8.987 1.00 17.31 O HETATM 2230 O HOH A 527 40.446 20.087 -9.113 1.00 45.88 O HETATM 2231 O HOH A 528 45.815 16.724 -5.706 1.00 26.18 O HETATM 2232 O HOH A 529 15.013 3.809 5.005 1.00 36.39 O HETATM 2233 O HOH A 530 33.078 30.372 14.963 1.00 29.92 O HETATM 2234 O HOH A 531 5.336 28.819 -13.339 1.00 37.87 O HETATM 2235 O HOH A 532 4.439 29.649 -2.201 1.00 29.24 O HETATM 2236 O HOH A 533 25.192 51.405 -5.951 1.00 37.69 O HETATM 2237 O HOH A 534 34.257 6.626 0.822 1.00 42.88 O HETATM 2238 O HOH A 535 20.862 31.847 12.621 1.00 39.47 O HETATM 2239 O HOH A 536 20.585 25.473 12.756 1.00 21.85 O HETATM 2240 O HOH A 537 28.367 18.310 -17.810 1.00 30.49 O HETATM 2241 O HOH A 538 31.205 -1.781 2.874 1.00 32.04 O HETATM 2242 O HOH A 539 21.353 13.560 -5.759 1.00 28.76 O HETATM 2243 O HOH A 540 19.485 12.781 -4.164 1.00 40.46 O HETATM 2244 O HOH A 541 14.581 38.440 3.529 1.00 32.78 O CONECT 2186 2187 2188 CONECT 2187 2186 CONECT 2188 2186 2189 CONECT 2189 2188 CONECT 2190 2191 2192 CONECT 2191 2190 CONECT 2192 2190 2193 CONECT 2193 2192 CONECT 2194 2195 2196 CONECT 2195 2194 CONECT 2196 2194 2197 2198 CONECT 2197 2196 CONECT 2198 2196 2199 CONECT 2199 2198 CONECT 2200 2201 2202 CONECT 2201 2200 CONECT 2202 2200 2203 CONECT 2203 2202 MASTER 446 0 4 12 11 0 6 6 2243 1 18 27 END