HEADER TRANSFERASE 26-FEB-14 4PON TITLE THE CRYSTAL STRUCTURE OF A PUTATIVE SAM-DEPENDENT METHYLTRANSFERASE, TITLE 2 YTQB, FROM BACILLUS SUBTILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE RNA METHYLASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS SUBSP. SPIZIZENII; SOURCE 3 ORGANISM_TAXID: 655816; SOURCE 4 STRAIN: ATCC 23059 / NRRL B-14472 / W23; SOURCE 5 GENE: BSUW23_14785, YTQB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: A MODIFIED PET49B KEYWDS ROSSMANN-LIKE FOLD, A PUTATIVE METHYLTRANSFERASE, S-ADENOSYL-L- KEYWDS 2 METHIONINE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.C.PARK,W.S.SONG,S.I.YOON REVDAT 3 08-NOV-23 4PON 1 SEQADV REVDAT 2 17-SEP-14 4PON 1 JRNL REVDAT 1 02-APR-14 4PON 0 JRNL AUTH S.C.PARK,W.S.SONG,S.I.YOON JRNL TITL STRUCTURAL ANALYSIS OF A PUTATIVE SAM-DEPENDENT JRNL TITL 2 METHYLTRANSFERASE, YTQB, FROM BACILLUS SUBTILIS JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 446 921 2014 JRNL REFN ISSN 0006-291X JRNL PMID 24637210 JRNL DOI 10.1016/J.BBRC.2014.03.026 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 28698 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.236 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1526 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2094 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 95 REMARK 3 BIN FREE R VALUE : 0.2590 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2629 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 154 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.73000 REMARK 3 B22 (A**2) : 0.16000 REMARK 3 B33 (A**2) : -0.89000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.155 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.143 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.100 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.813 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.953 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2688 ; 0.015 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1778 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3631 ; 1.460 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4387 ; 0.947 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 343 ; 6.964 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 120 ;37.832 ;25.750 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 478 ;15.215 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;14.840 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 421 ; 0.092 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2982 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 494 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1703 ; 0.861 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 702 ; 0.231 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2723 ; 1.518 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 985 ; 2.352 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 905 ; 3.860 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 191 6 REMARK 3 1 B 1 B 191 6 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 LOOSE POSITIONAL 1 A (A): 2137 ; 0.38 ; 5.00 REMARK 3 LOOSE THERMAL 1 B (A**2): 2137 ; 2.01 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 103 REMARK 3 ORIGIN FOR THE GROUP (A): -10.7790 -29.5540 -16.2790 REMARK 3 T TENSOR REMARK 3 T11: 0.2441 T22: 0.0624 REMARK 3 T33: 0.1567 T12: 0.0337 REMARK 3 T13: -0.0129 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 1.8629 L22: 5.7219 REMARK 3 L33: 1.6893 L12: -1.6691 REMARK 3 L13: -0.0247 L23: 0.9512 REMARK 3 S TENSOR REMARK 3 S11: 0.1309 S12: 0.1241 S13: 0.0317 REMARK 3 S21: -0.2951 S22: -0.1343 S23: 0.0322 REMARK 3 S31: 0.0612 S32: 0.0938 S33: 0.0034 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 115 A 191 REMARK 3 ORIGIN FOR THE GROUP (A): -23.9250 -20.5430 -12.5840 REMARK 3 T TENSOR REMARK 3 T11: 0.2020 T22: 0.0443 REMARK 3 T33: 0.3819 T12: -0.0125 REMARK 3 T13: -0.0171 T23: -0.0876 REMARK 3 L TENSOR REMARK 3 L11: 1.9600 L22: 10.4222 REMARK 3 L33: 1.0498 L12: -1.5661 REMARK 3 L13: -0.5030 L23: 1.2273 REMARK 3 S TENSOR REMARK 3 S11: 0.0266 S12: 0.0769 S13: -0.3841 REMARK 3 S21: -0.2042 S22: -0.3131 S23: 1.4977 REMARK 3 S31: 0.0801 S32: -0.1146 S33: 0.2864 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 103 REMARK 3 ORIGIN FOR THE GROUP (A): -16.6790 7.6980 3.7840 REMARK 3 T TENSOR REMARK 3 T11: 0.1583 T22: 0.0316 REMARK 3 T33: 0.2138 T12: 0.0197 REMARK 3 T13: -0.0557 T23: -0.0383 REMARK 3 L TENSOR REMARK 3 L11: 1.3167 L22: 3.1043 REMARK 3 L33: 1.2412 L12: 0.6800 REMARK 3 L13: -0.1880 L23: 0.3034 REMARK 3 S TENSOR REMARK 3 S11: -0.0705 S12: -0.1568 S13: 0.0852 REMARK 3 S21: 0.3319 S22: 0.0930 S23: -0.2668 REMARK 3 S31: 0.0609 S32: 0.0463 S33: -0.0225 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 116 B 191 REMARK 3 ORIGIN FOR THE GROUP (A): -21.4460 1.6800 -10.7270 REMARK 3 T TENSOR REMARK 3 T11: 0.1422 T22: 0.0233 REMARK 3 T33: 0.1281 T12: -0.0152 REMARK 3 T13: -0.0135 T23: -0.0169 REMARK 3 L TENSOR REMARK 3 L11: 1.6565 L22: 5.3935 REMARK 3 L33: 1.7874 L12: -0.0711 REMARK 3 L13: -0.2882 L23: 0.7308 REMARK 3 S TENSOR REMARK 3 S11: -0.0734 S12: 0.1794 S13: 0.0102 REMARK 3 S21: -0.3152 S22: 0.0181 S23: 0.0004 REMARK 3 S31: -0.0287 S32: -0.0462 S33: 0.0553 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4PON COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-FEB-14. REMARK 100 THE DEPOSITION ID IS D_1000085029. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5, 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97958 REMARK 200 MONOCHROMATOR : NA REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30744 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3EEY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30-36% PEG200/5% PEG2000/0.1 M SODIUM REMARK 280 CACODYLATE (PH 6.5) OR 30-36% PEG200/5% PEG2000/0.1 M HEPES (PH REMARK 280 7.0), VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.42950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.47550 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.28500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.47550 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.42950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 38.28500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -5 REMARK 465 SER A -4 REMARK 465 ALA A -3 REMARK 465 LYS A -2 REMARK 465 ASP A -1 REMARK 465 PRO A 0 REMARK 465 TYR A 104 REMARK 465 LEU A 105 REMARK 465 PRO A 106 REMARK 465 GLY A 107 REMARK 465 GLY A 108 REMARK 465 ASP A 109 REMARK 465 LYS A 110 REMARK 465 SER A 111 REMARK 465 ILE A 112 REMARK 465 THR A 113 REMARK 465 THR A 114 REMARK 465 HIS A 144 REMARK 465 PRO A 145 REMARK 465 GLU A 146 REMARK 465 GLY A 147 REMARK 465 LYS A 148 REMARK 465 ALA A 149 REMARK 465 GLU A 150 REMARK 465 LYS A 151 REMARK 465 ILE A 192 REMARK 465 SER A 193 REMARK 465 LYS A 194 REMARK 465 GLY B -5 REMARK 465 SER B -4 REMARK 465 ALA B -3 REMARK 465 LYS B -2 REMARK 465 ASP B -1 REMARK 465 PRO B 0 REMARK 465 TYR B 104 REMARK 465 LEU B 105 REMARK 465 PRO B 106 REMARK 465 GLY B 107 REMARK 465 GLY B 108 REMARK 465 ASP B 109 REMARK 465 LYS B 110 REMARK 465 SER B 111 REMARK 465 ILE B 112 REMARK 465 THR B 113 REMARK 465 THR B 114 REMARK 465 ASN B 115 REMARK 465 GLY B 143 REMARK 465 HIS B 144 REMARK 465 PRO B 145 REMARK 465 GLU B 146 REMARK 465 GLY B 147 REMARK 465 LYS B 148 REMARK 465 ALA B 149 REMARK 465 GLU B 150 REMARK 465 ILE B 192 REMARK 465 SER B 193 REMARK 465 LYS B 194 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 HIS A 142 CG ND1 CD2 CE1 NE2 REMARK 470 ASN A 152 CG OD1 ND2 REMARK 470 GLN A 177 CG CD OE1 NE2 REMARK 470 MET B 1 CG SD CE REMARK 470 LYS B 151 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA B 190 130.85 -31.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4POO RELATED DB: PDB DBREF 4PON A 1 194 UNP E0TY72 E0TY72_BACPZ 1 194 DBREF 4PON B 1 194 UNP E0TY72 E0TY72_BACPZ 1 194 SEQADV 4PON GLY A -5 UNP E0TY72 EXPRESSION TAG SEQADV 4PON SER A -4 UNP E0TY72 EXPRESSION TAG SEQADV 4PON ALA A -3 UNP E0TY72 EXPRESSION TAG SEQADV 4PON LYS A -2 UNP E0TY72 EXPRESSION TAG SEQADV 4PON ASP A -1 UNP E0TY72 EXPRESSION TAG SEQADV 4PON PRO A 0 UNP E0TY72 EXPRESSION TAG SEQADV 4PON GLY B -5 UNP E0TY72 EXPRESSION TAG SEQADV 4PON SER B -4 UNP E0TY72 EXPRESSION TAG SEQADV 4PON ALA B -3 UNP E0TY72 EXPRESSION TAG SEQADV 4PON LYS B -2 UNP E0TY72 EXPRESSION TAG SEQADV 4PON ASP B -1 UNP E0TY72 EXPRESSION TAG SEQADV 4PON PRO B 0 UNP E0TY72 EXPRESSION TAG SEQRES 1 A 200 GLY SER ALA LYS ASP PRO MET ILE LEU LYS LYS ILE LEU SEQRES 2 A 200 PRO TYR SER LYS GLU LEU LEU LYS MET ALA ALA GLY GLU SEQRES 3 A 200 GLY ASP ILE VAL ILE ASP ALA THR MET GLY ASN GLY HIS SEQRES 4 A 200 ASP THR GLN PHE LEU ALA GLU LEU VAL GLY GLU ASN GLY SEQRES 5 A 200 HIS VAL TYR ALA PHE ASP ILE GLN GLU SER ALA VAL ALA SEQRES 6 A 200 ASN THR LYS GLU ARG LEU GLY GLU ALA TYR GLN ALA ARG SEQRES 7 A 200 THR THR LEU PHE HIS LYS SER HIS ASP LYS ILE ALA LYS SEQRES 8 A 200 SER LEU PRO PRO GLU THR HIS GLY LYS VAL ALA ALA ALA SEQRES 9 A 200 VAL PHE ASN LEU GLY TYR LEU PRO GLY GLY ASP LYS SER SEQRES 10 A 200 ILE THR THR ASN GLY SER SER THR ILE LYS ALA ILE GLU SEQRES 11 A 200 GLN LEU LEU SER ILE MET LYS ASP GLU GLY LEU ILE VAL SEQRES 12 A 200 LEU VAL VAL TYR HIS GLY HIS PRO GLU GLY LYS ALA GLU SEQRES 13 A 200 LYS ASN ASP VAL LEU ASP PHE CYS ARG ASN LEU ASP GLN SEQRES 14 A 200 GLN ALA ALA ARG VAL LEU THR TYR GLY PHE ILE ASN GLN SEQRES 15 A 200 GLN ASN ASP PRO PRO PHE ILE VAL ALA ILE GLU LYS LYS SEQRES 16 A 200 ALA GLN ILE SER LYS SEQRES 1 B 200 GLY SER ALA LYS ASP PRO MET ILE LEU LYS LYS ILE LEU SEQRES 2 B 200 PRO TYR SER LYS GLU LEU LEU LYS MET ALA ALA GLY GLU SEQRES 3 B 200 GLY ASP ILE VAL ILE ASP ALA THR MET GLY ASN GLY HIS SEQRES 4 B 200 ASP THR GLN PHE LEU ALA GLU LEU VAL GLY GLU ASN GLY SEQRES 5 B 200 HIS VAL TYR ALA PHE ASP ILE GLN GLU SER ALA VAL ALA SEQRES 6 B 200 ASN THR LYS GLU ARG LEU GLY GLU ALA TYR GLN ALA ARG SEQRES 7 B 200 THR THR LEU PHE HIS LYS SER HIS ASP LYS ILE ALA LYS SEQRES 8 B 200 SER LEU PRO PRO GLU THR HIS GLY LYS VAL ALA ALA ALA SEQRES 9 B 200 VAL PHE ASN LEU GLY TYR LEU PRO GLY GLY ASP LYS SER SEQRES 10 B 200 ILE THR THR ASN GLY SER SER THR ILE LYS ALA ILE GLU SEQRES 11 B 200 GLN LEU LEU SER ILE MET LYS ASP GLU GLY LEU ILE VAL SEQRES 12 B 200 LEU VAL VAL TYR HIS GLY HIS PRO GLU GLY LYS ALA GLU SEQRES 13 B 200 LYS ASN ASP VAL LEU ASP PHE CYS ARG ASN LEU ASP GLN SEQRES 14 B 200 GLN ALA ALA ARG VAL LEU THR TYR GLY PHE ILE ASN GLN SEQRES 15 B 200 GLN ASN ASP PRO PRO PHE ILE VAL ALA ILE GLU LYS LYS SEQRES 16 B 200 ALA GLN ILE SER LYS FORMUL 3 HOH *154(H2 O) HELIX 1 1 LYS A 5 ALA A 18 1 14 HELIX 2 2 GLY A 32 GLY A 43 1 12 HELIX 3 3 GLN A 54 GLY A 66 1 13 HELIX 4 4 SER A 79 ASP A 81 5 3 HELIX 5 5 LYS A 82 LEU A 87 1 6 HELIX 6 6 PRO A 88 HIS A 92 5 5 HELIX 7 7 GLY A 116 ILE A 129 1 14 HELIX 8 8 ASP A 153 ASN A 160 1 8 HELIX 9 9 LYS B 5 ALA B 18 1 14 HELIX 10 10 GLY B 32 GLY B 43 1 12 HELIX 11 11 GLN B 54 GLY B 66 1 13 HELIX 12 12 SER B 79 ASP B 81 5 3 HELIX 13 13 LYS B 82 LEU B 87 1 6 HELIX 14 14 PRO B 88 HIS B 92 5 5 HELIX 15 15 SER B 117 ILE B 129 1 13 HELIX 16 16 ASN B 152 ASN B 160 1 9 SHEET 1 A14 THR A 73 HIS A 77 0 SHEET 2 A14 HIS A 47 ASP A 52 1 N ALA A 50 O PHE A 76 SHEET 3 A14 ILE A 23 ASP A 26 1 N VAL A 24 O TYR A 49 SHEET 4 A14 VAL A 95 LEU A 102 1 O ALA A 96 N ILE A 23 SHEET 5 A14 MET A 130 VAL A 140 1 O VAL A 139 N LEU A 102 SHEET 6 A14 PHE A 182 LYS A 188 -1 O VAL A 184 N LEU A 138 SHEET 7 A14 ALA A 166 PHE A 173 -1 N TYR A 171 O ILE A 183 SHEET 8 A14 ALA B 166 PHE B 173 -1 O GLY B 172 N THR A 170 SHEET 9 A14 PHE B 182 LYS B 188 -1 O ILE B 183 N TYR B 171 SHEET 10 A14 MET B 130 VAL B 140 -1 N LEU B 138 O VAL B 184 SHEET 11 A14 VAL B 95 LEU B 102 1 N LEU B 102 O VAL B 139 SHEET 12 A14 ILE B 23 ASP B 26 1 N ILE B 23 O ALA B 96 SHEET 13 A14 HIS B 47 ASP B 52 1 O TYR B 49 N VAL B 24 SHEET 14 A14 THR B 73 HIS B 77 1 O THR B 74 N ALA B 50 CRYST1 48.859 76.570 100.951 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020467 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013060 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009906 0.00000