data_4POV # _entry.id 4POV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4POV pdb_00004pov 10.2210/pdb4pov/pdb RCSB RCSB085037 ? ? WWPDB D_1000085037 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3RLB . unspecified PDB 4POP . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4POV _pdbx_database_status.recvd_initial_deposition_date 2014-02-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Swier, L.J.Y.M.' 1 'Guskov, A.' 2 'Slotboom, D.J.' 3 # _citation.id primary _citation.title 'Structure-Based Design of Potent Small-Molecule Binders to the S-Component of the ECF Transporter for Thiamine.' _citation.journal_abbrev Chembiochem _citation.journal_volume 16 _citation.page_first 819 _citation.page_last 826 _citation.year 2015 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1439-4227 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25676607 _citation.pdbx_database_id_DOI 10.1002/cbic.201402673 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Swier, L.J.' 1 ? primary 'Monjas, L.' 2 ? primary 'Guskov, A.' 3 ? primary 'de Voogd, A.R.' 4 ? primary 'Erkens, G.B.' 5 ? primary 'Slotboom, D.J.' 6 ? primary 'Hirsch, A.K.' 7 ? # _cell.entry_id 4POV _cell.length_a 62.720 _cell.length_b 84.350 _cell.length_c 127.250 _cell.angle_alpha 90.00 _cell.angle_beta 96.08 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4POV _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Thiamine transporter ThiT' 21231.480 2 ? ? ThiT ? 2 non-polymer syn '4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-methylthiophene-2-carbaldehyde' 247.316 2 ? ? ? ? 3 non-polymer syn '2-(2-METHOXYETHOXY)ETHANOL' 120.147 2 ? ? ? ? 4 non-polymer syn 'TETRAETHYLENE GLYCOL' 194.226 9 ? ? ? ? 5 non-polymer man 'nonyl beta-D-glucopyranoside' 306.395 6 ? ? ? ? 6 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 10 ? ? ? ? 7 non-polymer syn 'PENTAETHYLENE GLYCOL' 238.278 3 ? ? ? ? 8 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 3 ? ? ? ? 9 non-polymer syn 'HEXAETHYLENE GLYCOL' 282.331 1 ? ? ? ? 10 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 11 water nat water 18.015 63 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Thiamine ECF transporter S component ThiT' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHHHAMSNSKFNVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILLLSLRRGLTAGLVGGLIWGILSMIT GHAYILSLSQAFLEYLVAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAV NGISGILTAIAAFVILIIFVKKFPKLFIHSNY ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHHHAMSNSKFNVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILLLSLRRGLTAGLVGGLIWGILSMIT GHAYILSLSQAFLEYLVAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAV NGISGILTAIAAFVILIIFVKKFPKLFIHSNY ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 ALA n 1 11 MET n 1 12 SER n 1 13 ASN n 1 14 SER n 1 15 LYS n 1 16 PHE n 1 17 ASN n 1 18 VAL n 1 19 ARG n 1 20 LEU n 1 21 LEU n 1 22 THR n 1 23 GLU n 1 24 ILE n 1 25 ALA n 1 26 PHE n 1 27 MET n 1 28 ALA n 1 29 ALA n 1 30 LEU n 1 31 ALA n 1 32 PHE n 1 33 ILE n 1 34 ILE n 1 35 SER n 1 36 LEU n 1 37 ILE n 1 38 PRO n 1 39 ASN n 1 40 THR n 1 41 VAL n 1 42 TYR n 1 43 GLY n 1 44 TRP n 1 45 ILE n 1 46 ILE n 1 47 VAL n 1 48 GLU n 1 49 ILE n 1 50 ALA n 1 51 CYS n 1 52 ILE n 1 53 PRO n 1 54 ILE n 1 55 LEU n 1 56 LEU n 1 57 LEU n 1 58 SER n 1 59 LEU n 1 60 ARG n 1 61 ARG n 1 62 GLY n 1 63 LEU n 1 64 THR n 1 65 ALA n 1 66 GLY n 1 67 LEU n 1 68 VAL n 1 69 GLY n 1 70 GLY n 1 71 LEU n 1 72 ILE n 1 73 TRP n 1 74 GLY n 1 75 ILE n 1 76 LEU n 1 77 SER n 1 78 MET n 1 79 ILE n 1 80 THR n 1 81 GLY n 1 82 HIS n 1 83 ALA n 1 84 TYR n 1 85 ILE n 1 86 LEU n 1 87 SER n 1 88 LEU n 1 89 SER n 1 90 GLN n 1 91 ALA n 1 92 PHE n 1 93 LEU n 1 94 GLU n 1 95 TYR n 1 96 LEU n 1 97 VAL n 1 98 ALA n 1 99 PRO n 1 100 VAL n 1 101 SER n 1 102 LEU n 1 103 GLY n 1 104 ILE n 1 105 ALA n 1 106 GLY n 1 107 LEU n 1 108 PHE n 1 109 ARG n 1 110 GLN n 1 111 LYS n 1 112 THR n 1 113 ALA n 1 114 PRO n 1 115 LEU n 1 116 LYS n 1 117 LEU n 1 118 ALA n 1 119 PRO n 1 120 VAL n 1 121 LEU n 1 122 LEU n 1 123 GLY n 1 124 THR n 1 125 PHE n 1 126 VAL n 1 127 ALA n 1 128 VAL n 1 129 LEU n 1 130 LEU n 1 131 LYS n 1 132 TYR n 1 133 PHE n 1 134 PHE n 1 135 HIS n 1 136 PHE n 1 137 ILE n 1 138 ALA n 1 139 GLY n 1 140 ILE n 1 141 ILE n 1 142 PHE n 1 143 TRP n 1 144 SER n 1 145 GLN n 1 146 TYR n 1 147 ALA n 1 148 TRP n 1 149 LYS n 1 150 GLY n 1 151 TRP n 1 152 GLY n 1 153 ALA n 1 154 VAL n 1 155 ALA n 1 156 TYR n 1 157 SER n 1 158 LEU n 1 159 ALA n 1 160 VAL n 1 161 ASN n 1 162 GLY n 1 163 ILE n 1 164 SER n 1 165 GLY n 1 166 ILE n 1 167 LEU n 1 168 THR n 1 169 ALA n 1 170 ILE n 1 171 ALA n 1 172 ALA n 1 173 PHE n 1 174 VAL n 1 175 ILE n 1 176 LEU n 1 177 ILE n 1 178 ILE n 1 179 PHE n 1 180 VAL n 1 181 LYS n 1 182 LYS n 1 183 PHE n 1 184 PRO n 1 185 LYS n 1 186 LEU n 1 187 PHE n 1 188 ILE n 1 189 HIS n 1 190 SER n 1 191 ASN n 1 192 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'llmg_0334, LLNZ_01755, thiT' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain NZ9000 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Lactococcus lactis subsp. cremoris' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 416870 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Lactococcus lactis' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 1358 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain NZ9000 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code THIT_LACLM _struct_ref.pdbx_db_accession A2RI47 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSNSKFNVRLLTEIAFMAALAFIISLIPNTVYGWIIVEIACIPILLLSLRRGLTAGLVGGLIWGILSMITGHAYILSLSQ AFLEYLVAPVSLGIAGLFRQKTAPLKLAPVLLGTFVAVLLKYFFHFIAGIIFWSQYAWKGWGAVAYSLAVNGISGILTAI AAFVILIIFVKKFPKLFIHSNY ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4POV A 11 ? 192 ? A2RI47 1 ? 182 ? 1 182 2 1 4POV B 11 ? 192 ? A2RI47 1 ? 182 ? 1 182 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4POV MET A 1 ? UNP A2RI47 ? ? 'initiating methionine' -9 1 1 4POV HIS A 2 ? UNP A2RI47 ? ? 'expression tag' -8 2 1 4POV HIS A 3 ? UNP A2RI47 ? ? 'expression tag' -7 3 1 4POV HIS A 4 ? UNP A2RI47 ? ? 'expression tag' -6 4 1 4POV HIS A 5 ? UNP A2RI47 ? ? 'expression tag' -5 5 1 4POV HIS A 6 ? UNP A2RI47 ? ? 'expression tag' -4 6 1 4POV HIS A 7 ? UNP A2RI47 ? ? 'expression tag' -3 7 1 4POV HIS A 8 ? UNP A2RI47 ? ? 'expression tag' -2 8 1 4POV HIS A 9 ? UNP A2RI47 ? ? 'expression tag' -1 9 1 4POV ALA A 10 ? UNP A2RI47 ? ? 'expression tag' 0 10 2 4POV MET B 1 ? UNP A2RI47 ? ? 'initiating methionine' -9 11 2 4POV HIS B 2 ? UNP A2RI47 ? ? 'expression tag' -8 12 2 4POV HIS B 3 ? UNP A2RI47 ? ? 'expression tag' -7 13 2 4POV HIS B 4 ? UNP A2RI47 ? ? 'expression tag' -6 14 2 4POV HIS B 5 ? UNP A2RI47 ? ? 'expression tag' -5 15 2 4POV HIS B 6 ? UNP A2RI47 ? ? 'expression tag' -4 16 2 4POV HIS B 7 ? UNP A2RI47 ? ? 'expression tag' -3 17 2 4POV HIS B 8 ? UNP A2RI47 ? ? 'expression tag' -2 18 2 4POV HIS B 9 ? UNP A2RI47 ? ? 'expression tag' -1 19 2 4POV ALA B 10 ? UNP A2RI47 ? ? 'expression tag' 0 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 1PE non-polymer . 'PENTAETHYLENE GLYCOL' PEG400 'C10 H22 O6' 238.278 2VY non-polymer . '4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-methylthiophene-2-carbaldehyde' ? 'C12 H13 N3 O S' 247.316 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 BNG D-saccharide n 'nonyl beta-D-glucopyranoside' 'Beta-NONYLGLUCOSIDE; nonyl beta-D-glucoside; nonyl D-glucoside; nonyl glucoside' 'C15 H30 O6' 306.395 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 P6G non-polymer . 'HEXAETHYLENE GLYCOL' 'POLYETHYLENE GLYCOL PEG400' 'C12 H26 O7' 282.331 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PG0 non-polymer . '2-(2-METHOXYETHOXY)ETHANOL' 'PEG 6000' 'C5 H12 O3' 120.147 PG4 non-polymer . 'TETRAETHYLENE GLYCOL' ? 'C8 H18 O5' 194.226 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4POV _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.94 _exptl_crystal.density_percent_sol 68.79 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 278 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '0.15 M NH4NO3, 20% PEG3350, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 278K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-10-27 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.000002 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID29' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID29 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.000002 # _reflns.entry_id 4POV _reflns.observed_criterion_sigma_I 1.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 48.042 _reflns.d_resolution_high 2.2 _reflns.number_obs 33341 _reflns.number_all 33341 _reflns.percent_possible_obs 99.38 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 2.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.2 _reflns_shell.d_res_low 2.2648 _reflns_shell.percent_possible_all 0.97 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4POV _refine.ls_number_reflns_obs 33341 _refine.ls_number_reflns_all 33341 _refine.pdbx_ls_sigma_I 1.0 _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 48.042 _refine.ls_d_res_high 2.2 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs 0.1852 _refine.ls_R_factor_all 0.1878 _refine.ls_R_factor_R_work 0.1852 _refine.ls_R_factor_R_free 0.2369 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1666 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'pdb entry 3RLB' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2752 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 461 _refine_hist.number_atoms_solvent 63 _refine_hist.number_atoms_total 3276 _refine_hist.d_res_high 2.2 _refine_hist.d_res_low 48.042 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.013 ? ? ? ? 'X-RAY DIFFRACTION' f_angle_deg 1.345 ? ? ? ? 'X-RAY DIFFRACTION' # _struct.entry_id 4POV _struct.title 'ThiT with LMG135 bound' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4POV _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'S-component, Thiamine-binding protein, ECF module, Membrane, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 5 ? K N N 5 ? L N N 5 ? M N N 6 ? N N N 6 ? O N N 6 ? P N N 6 ? Q N N 6 ? R N N 7 ? S N N 8 ? T N N 8 ? U N N 8 ? V N N 9 ? W N N 2 ? X N N 3 ? Y N N 4 ? Z N N 4 ? AA N N 4 ? BA N N 4 ? CA N N 5 ? DA N N 5 ? EA N N 5 ? FA N N 6 ? GA N N 6 ? HA N N 6 ? IA N N 6 ? JA N N 6 ? KA N N 7 ? LA N N 7 ? MA N N 10 ? NA N N 11 ? OA N N 11 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 15 ? SER A 35 ? LYS A 5 SER A 25 1 ? 21 HELX_P HELX_P2 2 GLU A 48 ? ALA A 50 ? GLU A 38 ALA A 40 5 ? 3 HELX_P HELX_P3 3 CYS A 51 ? GLY A 62 ? CYS A 41 GLY A 52 1 ? 12 HELX_P HELX_P4 4 GLY A 62 ? THR A 80 ? GLY A 52 THR A 70 1 ? 19 HELX_P HELX_P5 5 SER A 87 ? LEU A 96 ? SER A 77 LEU A 86 1 ? 10 HELX_P HELX_P6 6 LEU A 96 ? LEU A 102 ? LEU A 86 LEU A 92 1 ? 7 HELX_P HELX_P7 7 GLY A 103 ? ARG A 109 ? GLY A 93 ARG A 99 5 ? 7 HELX_P HELX_P8 8 LYS A 116 ? TRP A 143 ? LYS A 106 TRP A 133 1 ? 28 HELX_P HELX_P9 9 SER A 144 ? ALA A 147 ? SER A 134 ALA A 137 5 ? 4 HELX_P HELX_P10 10 GLY A 152 ? PHE A 183 ? GLY A 142 PHE A 173 1 ? 32 HELX_P HELX_P11 11 PRO A 184 ? ILE A 188 ? PRO A 174 ILE A 178 5 ? 5 HELX_P HELX_P12 12 VAL B 18 ? SER B 35 ? VAL B 8 SER B 25 1 ? 18 HELX_P HELX_P13 13 GLU B 48 ? ALA B 50 ? GLU B 38 ALA B 40 5 ? 3 HELX_P HELX_P14 14 CYS B 51 ? GLY B 62 ? CYS B 41 GLY B 52 1 ? 12 HELX_P HELX_P15 15 GLY B 62 ? THR B 80 ? GLY B 52 THR B 70 1 ? 19 HELX_P HELX_P16 16 SER B 87 ? LEU B 96 ? SER B 77 LEU B 86 1 ? 10 HELX_P HELX_P17 17 LEU B 96 ? SER B 101 ? LEU B 86 SER B 91 1 ? 6 HELX_P HELX_P18 18 LEU B 102 ? ARG B 109 ? LEU B 92 ARG B 99 5 ? 8 HELX_P HELX_P19 19 LYS B 116 ? TRP B 143 ? LYS B 106 TRP B 133 1 ? 28 HELX_P HELX_P20 20 SER B 144 ? ALA B 147 ? SER B 134 ALA B 137 5 ? 4 HELX_P HELX_P21 21 GLY B 152 ? PHE B 183 ? GLY B 142 PHE B 173 1 ? 32 HELX_P HELX_P22 22 PRO B 184 ? ILE B 188 ? PRO B 174 ILE B 178 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ALA 113 A . ? ALA 103 A PRO 114 A ? PRO 104 A 1 -5.85 2 ALA 113 B . ? ALA 103 B PRO 114 B ? PRO 104 B 1 -6.84 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 40 ? TYR A 42 ? THR A 30 TYR A 32 A 2 ILE A 45 ? ILE A 46 ? ILE A 35 ILE A 36 B 1 THR B 40 ? TYR B 42 ? THR B 30 TYR B 32 B 2 ILE B 45 ? ILE B 46 ? ILE B 35 ILE B 36 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 41 ? N VAL A 31 O ILE A 45 ? O ILE A 35 B 1 2 N VAL B 41 ? N VAL B 31 O ILE B 45 ? O ILE B 35 # _database_PDB_matrix.entry_id 4POV _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4POV _atom_sites.fract_transf_matrix[1][1] 0.015944 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001697 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011855 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007903 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -9 ? ? ? A . n A 1 2 HIS 2 -8 ? ? ? A . n A 1 3 HIS 3 -7 ? ? ? A . n A 1 4 HIS 4 -6 ? ? ? A . n A 1 5 HIS 5 -5 ? ? ? A . n A 1 6 HIS 6 -4 ? ? ? A . n A 1 7 HIS 7 -3 ? ? ? A . n A 1 8 HIS 8 -2 ? ? ? A . n A 1 9 HIS 9 -1 ? ? ? A . n A 1 10 ALA 10 0 ? ? ? A . n A 1 11 MET 11 1 ? ? ? A . n A 1 12 SER 12 2 ? ? ? A . n A 1 13 ASN 13 3 ? ? ? A . n A 1 14 SER 14 4 ? ? ? A . n A 1 15 LYS 15 5 5 LYS LYS A . n A 1 16 PHE 16 6 6 PHE PHE A . n A 1 17 ASN 17 7 7 ASN ASN A . n A 1 18 VAL 18 8 8 VAL VAL A . n A 1 19 ARG 19 9 9 ARG ARG A . n A 1 20 LEU 20 10 10 LEU LEU A . n A 1 21 LEU 21 11 11 LEU LEU A . n A 1 22 THR 22 12 12 THR THR A . n A 1 23 GLU 23 13 13 GLU GLU A . n A 1 24 ILE 24 14 14 ILE ILE A . n A 1 25 ALA 25 15 15 ALA ALA A . n A 1 26 PHE 26 16 16 PHE PHE A . n A 1 27 MET 27 17 17 MET MET A . n A 1 28 ALA 28 18 18 ALA ALA A . n A 1 29 ALA 29 19 19 ALA ALA A . n A 1 30 LEU 30 20 20 LEU LEU A . n A 1 31 ALA 31 21 21 ALA ALA A . n A 1 32 PHE 32 22 22 PHE PHE A . n A 1 33 ILE 33 23 23 ILE ILE A . n A 1 34 ILE 34 24 24 ILE ILE A . n A 1 35 SER 35 25 25 SER SER A . n A 1 36 LEU 36 26 26 LEU LEU A . n A 1 37 ILE 37 27 27 ILE ILE A . n A 1 38 PRO 38 28 28 PRO PRO A . n A 1 39 ASN 39 29 29 ASN ASN A . n A 1 40 THR 40 30 30 THR THR A . n A 1 41 VAL 41 31 31 VAL VAL A . n A 1 42 TYR 42 32 32 TYR TYR A . n A 1 43 GLY 43 33 33 GLY GLY A . n A 1 44 TRP 44 34 34 TRP TRP A . n A 1 45 ILE 45 35 35 ILE ILE A . n A 1 46 ILE 46 36 36 ILE ILE A . n A 1 47 VAL 47 37 37 VAL VAL A . n A 1 48 GLU 48 38 38 GLU GLU A . n A 1 49 ILE 49 39 39 ILE ILE A . n A 1 50 ALA 50 40 40 ALA ALA A . n A 1 51 CYS 51 41 41 CYS CYS A . n A 1 52 ILE 52 42 42 ILE ILE A . n A 1 53 PRO 53 43 43 PRO PRO A . n A 1 54 ILE 54 44 44 ILE ILE A . n A 1 55 LEU 55 45 45 LEU LEU A . n A 1 56 LEU 56 46 46 LEU LEU A . n A 1 57 LEU 57 47 47 LEU LEU A . n A 1 58 SER 58 48 48 SER SER A . n A 1 59 LEU 59 49 49 LEU LEU A . n A 1 60 ARG 60 50 50 ARG ARG A . n A 1 61 ARG 61 51 51 ARG ARG A . n A 1 62 GLY 62 52 52 GLY GLY A . n A 1 63 LEU 63 53 53 LEU LEU A . n A 1 64 THR 64 54 54 THR THR A . n A 1 65 ALA 65 55 55 ALA ALA A . n A 1 66 GLY 66 56 56 GLY GLY A . n A 1 67 LEU 67 57 57 LEU LEU A . n A 1 68 VAL 68 58 58 VAL VAL A . n A 1 69 GLY 69 59 59 GLY GLY A . n A 1 70 GLY 70 60 60 GLY GLY A . n A 1 71 LEU 71 61 61 LEU LEU A . n A 1 72 ILE 72 62 62 ILE ILE A . n A 1 73 TRP 73 63 63 TRP TRP A . n A 1 74 GLY 74 64 64 GLY GLY A . n A 1 75 ILE 75 65 65 ILE ILE A . n A 1 76 LEU 76 66 66 LEU LEU A . n A 1 77 SER 77 67 67 SER SER A . n A 1 78 MET 78 68 68 MET MET A . n A 1 79 ILE 79 69 69 ILE ILE A . n A 1 80 THR 80 70 70 THR THR A . n A 1 81 GLY 81 71 71 GLY GLY A . n A 1 82 HIS 82 72 72 HIS HIS A . n A 1 83 ALA 83 73 73 ALA ALA A . n A 1 84 TYR 84 74 74 TYR TYR A . n A 1 85 ILE 85 75 75 ILE ILE A . n A 1 86 LEU 86 76 76 LEU LEU A . n A 1 87 SER 87 77 77 SER SER A . n A 1 88 LEU 88 78 78 LEU LEU A . n A 1 89 SER 89 79 79 SER SER A . n A 1 90 GLN 90 80 80 GLN GLN A . n A 1 91 ALA 91 81 81 ALA ALA A . n A 1 92 PHE 92 82 82 PHE PHE A . n A 1 93 LEU 93 83 83 LEU LEU A . n A 1 94 GLU 94 84 84 GLU GLU A . n A 1 95 TYR 95 85 85 TYR TYR A . n A 1 96 LEU 96 86 86 LEU LEU A . n A 1 97 VAL 97 87 87 VAL VAL A . n A 1 98 ALA 98 88 88 ALA ALA A . n A 1 99 PRO 99 89 89 PRO PRO A . n A 1 100 VAL 100 90 90 VAL VAL A . n A 1 101 SER 101 91 91 SER SER A . n A 1 102 LEU 102 92 92 LEU LEU A . n A 1 103 GLY 103 93 93 GLY GLY A . n A 1 104 ILE 104 94 94 ILE ILE A . n A 1 105 ALA 105 95 95 ALA ALA A . n A 1 106 GLY 106 96 96 GLY GLY A . n A 1 107 LEU 107 97 97 LEU LEU A . n A 1 108 PHE 108 98 98 PHE PHE A . n A 1 109 ARG 109 99 99 ARG ARG A . n A 1 110 GLN 110 100 100 GLN GLN A . n A 1 111 LYS 111 101 101 LYS LYS A . n A 1 112 THR 112 102 102 THR THR A . n A 1 113 ALA 113 103 103 ALA ALA A . n A 1 114 PRO 114 104 104 PRO PRO A . n A 1 115 LEU 115 105 105 LEU LEU A . n A 1 116 LYS 116 106 106 LYS LYS A . n A 1 117 LEU 117 107 107 LEU LEU A . n A 1 118 ALA 118 108 108 ALA ALA A . n A 1 119 PRO 119 109 109 PRO PRO A . n A 1 120 VAL 120 110 110 VAL VAL A . n A 1 121 LEU 121 111 111 LEU LEU A . n A 1 122 LEU 122 112 112 LEU LEU A . n A 1 123 GLY 123 113 113 GLY GLY A . n A 1 124 THR 124 114 114 THR THR A . n A 1 125 PHE 125 115 115 PHE PHE A . n A 1 126 VAL 126 116 116 VAL VAL A . n A 1 127 ALA 127 117 117 ALA ALA A . n A 1 128 VAL 128 118 118 VAL VAL A . n A 1 129 LEU 129 119 119 LEU LEU A . n A 1 130 LEU 130 120 120 LEU LEU A . n A 1 131 LYS 131 121 121 LYS LYS A . n A 1 132 TYR 132 122 122 TYR TYR A . n A 1 133 PHE 133 123 123 PHE PHE A . n A 1 134 PHE 134 124 124 PHE PHE A . n A 1 135 HIS 135 125 125 HIS HIS A . n A 1 136 PHE 136 126 126 PHE PHE A . n A 1 137 ILE 137 127 127 ILE ILE A . n A 1 138 ALA 138 128 128 ALA ALA A . n A 1 139 GLY 139 129 129 GLY GLY A . n A 1 140 ILE 140 130 130 ILE ILE A . n A 1 141 ILE 141 131 131 ILE ILE A . n A 1 142 PHE 142 132 132 PHE PHE A . n A 1 143 TRP 143 133 133 TRP TRP A . n A 1 144 SER 144 134 134 SER SER A . n A 1 145 GLN 145 135 135 GLN GLN A . n A 1 146 TYR 146 136 136 TYR TYR A . n A 1 147 ALA 147 137 137 ALA ALA A . n A 1 148 TRP 148 138 138 TRP TRP A . n A 1 149 LYS 149 139 139 LYS LYS A . n A 1 150 GLY 150 140 140 GLY GLY A . n A 1 151 TRP 151 141 141 TRP TRP A . n A 1 152 GLY 152 142 142 GLY GLY A . n A 1 153 ALA 153 143 143 ALA ALA A . n A 1 154 VAL 154 144 144 VAL VAL A . n A 1 155 ALA 155 145 145 ALA ALA A . n A 1 156 TYR 156 146 146 TYR TYR A . n A 1 157 SER 157 147 147 SER SER A . n A 1 158 LEU 158 148 148 LEU LEU A . n A 1 159 ALA 159 149 149 ALA ALA A . n A 1 160 VAL 160 150 150 VAL VAL A . n A 1 161 ASN 161 151 151 ASN ASN A . n A 1 162 GLY 162 152 152 GLY GLY A . n A 1 163 ILE 163 153 153 ILE ILE A . n A 1 164 SER 164 154 154 SER SER A . n A 1 165 GLY 165 155 155 GLY GLY A . n A 1 166 ILE 166 156 156 ILE ILE A . n A 1 167 LEU 167 157 157 LEU LEU A . n A 1 168 THR 168 158 158 THR THR A . n A 1 169 ALA 169 159 159 ALA ALA A . n A 1 170 ILE 170 160 160 ILE ILE A . n A 1 171 ALA 171 161 161 ALA ALA A . n A 1 172 ALA 172 162 162 ALA ALA A . n A 1 173 PHE 173 163 163 PHE PHE A . n A 1 174 VAL 174 164 164 VAL VAL A . n A 1 175 ILE 175 165 165 ILE ILE A . n A 1 176 LEU 176 166 166 LEU LEU A . n A 1 177 ILE 177 167 167 ILE ILE A . n A 1 178 ILE 178 168 168 ILE ILE A . n A 1 179 PHE 179 169 169 PHE PHE A . n A 1 180 VAL 180 170 170 VAL VAL A . n A 1 181 LYS 181 171 171 LYS LYS A . n A 1 182 LYS 182 172 172 LYS LYS A . n A 1 183 PHE 183 173 173 PHE PHE A . n A 1 184 PRO 184 174 174 PRO PRO A . n A 1 185 LYS 185 175 175 LYS LYS A . n A 1 186 LEU 186 176 176 LEU LEU A . n A 1 187 PHE 187 177 177 PHE PHE A . n A 1 188 ILE 188 178 178 ILE ILE A . n A 1 189 HIS 189 179 179 HIS HIS A . n A 1 190 SER 190 180 180 SER SER A . n A 1 191 ASN 191 181 181 ASN ASN A . n A 1 192 TYR 192 182 182 TYR TYR A . n B 1 1 MET 1 -9 ? ? ? B . n B 1 2 HIS 2 -8 ? ? ? B . n B 1 3 HIS 3 -7 ? ? ? B . n B 1 4 HIS 4 -6 ? ? ? B . n B 1 5 HIS 5 -5 ? ? ? B . n B 1 6 HIS 6 -4 ? ? ? B . n B 1 7 HIS 7 -3 ? ? ? B . n B 1 8 HIS 8 -2 ? ? ? B . n B 1 9 HIS 9 -1 ? ? ? B . n B 1 10 ALA 10 0 ? ? ? B . n B 1 11 MET 11 1 ? ? ? B . n B 1 12 SER 12 2 ? ? ? B . n B 1 13 ASN 13 3 ? ? ? B . n B 1 14 SER 14 4 ? ? ? B . n B 1 15 LYS 15 5 ? ? ? B . n B 1 16 PHE 16 6 ? ? ? B . n B 1 17 ASN 17 7 7 ASN ASN B . n B 1 18 VAL 18 8 8 VAL VAL B . n B 1 19 ARG 19 9 9 ARG ARG B . n B 1 20 LEU 20 10 10 LEU LEU B . n B 1 21 LEU 21 11 11 LEU LEU B . n B 1 22 THR 22 12 12 THR THR B . n B 1 23 GLU 23 13 13 GLU GLU B . n B 1 24 ILE 24 14 14 ILE ILE B . n B 1 25 ALA 25 15 15 ALA ALA B . n B 1 26 PHE 26 16 16 PHE PHE B . n B 1 27 MET 27 17 17 MET MET B . n B 1 28 ALA 28 18 18 ALA ALA B . n B 1 29 ALA 29 19 19 ALA ALA B . n B 1 30 LEU 30 20 20 LEU LEU B . n B 1 31 ALA 31 21 21 ALA ALA B . n B 1 32 PHE 32 22 22 PHE PHE B . n B 1 33 ILE 33 23 23 ILE ILE B . n B 1 34 ILE 34 24 24 ILE ILE B . n B 1 35 SER 35 25 25 SER SER B . n B 1 36 LEU 36 26 26 LEU LEU B . n B 1 37 ILE 37 27 27 ILE ILE B . n B 1 38 PRO 38 28 28 PRO PRO B . n B 1 39 ASN 39 29 29 ASN ASN B . n B 1 40 THR 40 30 30 THR THR B . n B 1 41 VAL 41 31 31 VAL VAL B . n B 1 42 TYR 42 32 32 TYR TYR B . n B 1 43 GLY 43 33 33 GLY GLY B . n B 1 44 TRP 44 34 34 TRP TRP B . n B 1 45 ILE 45 35 35 ILE ILE B . n B 1 46 ILE 46 36 36 ILE ILE B . n B 1 47 VAL 47 37 37 VAL VAL B . n B 1 48 GLU 48 38 38 GLU GLU B . n B 1 49 ILE 49 39 39 ILE ILE B . n B 1 50 ALA 50 40 40 ALA ALA B . n B 1 51 CYS 51 41 41 CYS CYS B . n B 1 52 ILE 52 42 42 ILE ILE B . n B 1 53 PRO 53 43 43 PRO PRO B . n B 1 54 ILE 54 44 44 ILE ILE B . n B 1 55 LEU 55 45 45 LEU LEU B . n B 1 56 LEU 56 46 46 LEU LEU B . n B 1 57 LEU 57 47 47 LEU LEU B . n B 1 58 SER 58 48 48 SER SER B . n B 1 59 LEU 59 49 49 LEU LEU B . n B 1 60 ARG 60 50 50 ARG ARG B . n B 1 61 ARG 61 51 51 ARG ARG B . n B 1 62 GLY 62 52 52 GLY GLY B . n B 1 63 LEU 63 53 53 LEU LEU B . n B 1 64 THR 64 54 54 THR THR B . n B 1 65 ALA 65 55 55 ALA ALA B . n B 1 66 GLY 66 56 56 GLY GLY B . n B 1 67 LEU 67 57 57 LEU LEU B . n B 1 68 VAL 68 58 58 VAL VAL B . n B 1 69 GLY 69 59 59 GLY GLY B . n B 1 70 GLY 70 60 60 GLY GLY B . n B 1 71 LEU 71 61 61 LEU LEU B . n B 1 72 ILE 72 62 62 ILE ILE B . n B 1 73 TRP 73 63 63 TRP TRP B . n B 1 74 GLY 74 64 64 GLY GLY B . n B 1 75 ILE 75 65 65 ILE ILE B . n B 1 76 LEU 76 66 66 LEU LEU B . n B 1 77 SER 77 67 67 SER SER B . n B 1 78 MET 78 68 68 MET MET B . n B 1 79 ILE 79 69 69 ILE ILE B . n B 1 80 THR 80 70 70 THR THR B . n B 1 81 GLY 81 71 71 GLY GLY B . n B 1 82 HIS 82 72 72 HIS HIS B . n B 1 83 ALA 83 73 73 ALA ALA B . n B 1 84 TYR 84 74 74 TYR TYR B . n B 1 85 ILE 85 75 75 ILE ILE B . n B 1 86 LEU 86 76 76 LEU LEU B . n B 1 87 SER 87 77 77 SER SER B . n B 1 88 LEU 88 78 78 LEU LEU B . n B 1 89 SER 89 79 79 SER SER B . n B 1 90 GLN 90 80 80 GLN GLN B . n B 1 91 ALA 91 81 81 ALA ALA B . n B 1 92 PHE 92 82 82 PHE PHE B . n B 1 93 LEU 93 83 83 LEU LEU B . n B 1 94 GLU 94 84 84 GLU GLU B . n B 1 95 TYR 95 85 85 TYR TYR B . n B 1 96 LEU 96 86 86 LEU LEU B . n B 1 97 VAL 97 87 87 VAL VAL B . n B 1 98 ALA 98 88 88 ALA ALA B . n B 1 99 PRO 99 89 89 PRO PRO B . n B 1 100 VAL 100 90 90 VAL VAL B . n B 1 101 SER 101 91 91 SER SER B . n B 1 102 LEU 102 92 92 LEU LEU B . n B 1 103 GLY 103 93 93 GLY GLY B . n B 1 104 ILE 104 94 94 ILE ILE B . n B 1 105 ALA 105 95 95 ALA ALA B . n B 1 106 GLY 106 96 96 GLY GLY B . n B 1 107 LEU 107 97 97 LEU LEU B . n B 1 108 PHE 108 98 98 PHE PHE B . n B 1 109 ARG 109 99 99 ARG ARG B . n B 1 110 GLN 110 100 100 GLN GLN B . n B 1 111 LYS 111 101 101 LYS LYS B . n B 1 112 THR 112 102 102 THR THR B . n B 1 113 ALA 113 103 103 ALA ALA B . n B 1 114 PRO 114 104 104 PRO PRO B . n B 1 115 LEU 115 105 105 LEU LEU B . n B 1 116 LYS 116 106 106 LYS LYS B . n B 1 117 LEU 117 107 107 LEU LEU B . n B 1 118 ALA 118 108 108 ALA ALA B . n B 1 119 PRO 119 109 109 PRO PRO B . n B 1 120 VAL 120 110 110 VAL VAL B . n B 1 121 LEU 121 111 111 LEU LEU B . n B 1 122 LEU 122 112 112 LEU LEU B . n B 1 123 GLY 123 113 113 GLY GLY B . n B 1 124 THR 124 114 114 THR THR B . n B 1 125 PHE 125 115 115 PHE PHE B . n B 1 126 VAL 126 116 116 VAL VAL B . n B 1 127 ALA 127 117 117 ALA ALA B . n B 1 128 VAL 128 118 118 VAL VAL B . n B 1 129 LEU 129 119 119 LEU LEU B . n B 1 130 LEU 130 120 120 LEU LEU B . n B 1 131 LYS 131 121 121 LYS LYS B . n B 1 132 TYR 132 122 122 TYR TYR B . n B 1 133 PHE 133 123 123 PHE PHE B . n B 1 134 PHE 134 124 124 PHE PHE B . n B 1 135 HIS 135 125 125 HIS HIS B . n B 1 136 PHE 136 126 126 PHE PHE B . n B 1 137 ILE 137 127 127 ILE ILE B . n B 1 138 ALA 138 128 128 ALA ALA B . n B 1 139 GLY 139 129 129 GLY GLY B . n B 1 140 ILE 140 130 130 ILE ILE B . n B 1 141 ILE 141 131 131 ILE ILE B . n B 1 142 PHE 142 132 132 PHE PHE B . n B 1 143 TRP 143 133 133 TRP TRP B . n B 1 144 SER 144 134 134 SER SER B . n B 1 145 GLN 145 135 135 GLN GLN B . n B 1 146 TYR 146 136 136 TYR TYR B . n B 1 147 ALA 147 137 137 ALA ALA B . n B 1 148 TRP 148 138 138 TRP TRP B . n B 1 149 LYS 149 139 139 LYS LYS B . n B 1 150 GLY 150 140 140 GLY GLY B . n B 1 151 TRP 151 141 141 TRP TRP B . n B 1 152 GLY 152 142 142 GLY GLY B . n B 1 153 ALA 153 143 143 ALA ALA B . n B 1 154 VAL 154 144 144 VAL VAL B . n B 1 155 ALA 155 145 145 ALA ALA B . n B 1 156 TYR 156 146 146 TYR TYR B . n B 1 157 SER 157 147 147 SER SER B . n B 1 158 LEU 158 148 148 LEU LEU B . n B 1 159 ALA 159 149 149 ALA ALA B . n B 1 160 VAL 160 150 150 VAL VAL B . n B 1 161 ASN 161 151 151 ASN ASN B . n B 1 162 GLY 162 152 152 GLY GLY B . n B 1 163 ILE 163 153 153 ILE ILE B . n B 1 164 SER 164 154 154 SER SER B . n B 1 165 GLY 165 155 155 GLY GLY B . n B 1 166 ILE 166 156 156 ILE ILE B . n B 1 167 LEU 167 157 157 LEU LEU B . n B 1 168 THR 168 158 158 THR THR B . n B 1 169 ALA 169 159 159 ALA ALA B . n B 1 170 ILE 170 160 160 ILE ILE B . n B 1 171 ALA 171 161 161 ALA ALA B . n B 1 172 ALA 172 162 162 ALA ALA B . n B 1 173 PHE 173 163 163 PHE PHE B . n B 1 174 VAL 174 164 164 VAL VAL B . n B 1 175 ILE 175 165 165 ILE ILE B . n B 1 176 LEU 176 166 166 LEU LEU B . n B 1 177 ILE 177 167 167 ILE ILE B . n B 1 178 ILE 178 168 168 ILE ILE B . n B 1 179 PHE 179 169 169 PHE PHE B . n B 1 180 VAL 180 170 170 VAL VAL B . n B 1 181 LYS 181 171 171 LYS LYS B . n B 1 182 LYS 182 172 172 LYS LYS B . n B 1 183 PHE 183 173 173 PHE PHE B . n B 1 184 PRO 184 174 174 PRO PRO B . n B 1 185 LYS 185 175 175 LYS LYS B . n B 1 186 LEU 186 176 176 LEU LEU B . n B 1 187 PHE 187 177 177 PHE PHE B . n B 1 188 ILE 188 178 178 ILE ILE B . n B 1 189 HIS 189 179 179 HIS HIS B . n B 1 190 SER 190 180 180 SER SER B . n B 1 191 ASN 191 181 181 ASN ASN B . n B 1 192 TYR 192 182 182 TYR TYR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 2VY 1 201 1 2VY LIG A . D 3 PG0 1 202 11 PG0 PG0 A . E 4 PG4 1 203 1 PG4 PG4 A . F 4 PG4 1 204 6 PG4 PG4 A . G 4 PG4 1 205 8 PG4 PG4 A . H 4 PG4 1 206 11 PG4 PG4 A . I 4 PG4 1 207 14 PG4 PG4 A . J 5 BNG 1 208 3 BNG BNG A . K 5 BNG 1 209 5 BNG BNG A . L 5 BNG 1 210 6 BNG BNG A . M 6 PEG 1 211 8 PEG PEG A . N 6 PEG 1 212 11 PEG PEG A . O 6 PEG 1 213 14 PEG PEG A . P 6 PEG 1 214 15 PEG PEG A . Q 6 PEG 1 215 16 PEG PEG A . R 7 1PE 1 216 5 1PE 1PE A . S 8 PGE 1 217 1 PGE PGE A . T 8 PGE 1 218 2 PGE PGE A . U 8 PGE 1 219 4 PGE PGE A . V 9 P6G 1 220 1 P6G P6G A . W 2 2VY 1 201 2 2VY LIG B . X 3 PG0 1 202 4 PG0 PG0 B . Y 4 PG4 1 203 4 PG4 PG4 B . Z 4 PG4 1 204 13 PG4 PG4 B . AA 4 PG4 1 205 15 PG4 PG4 B . BA 4 PG4 1 206 16 PG4 PG4 B . CA 5 BNG 1 207 1 BNG BNG B . DA 5 BNG 1 208 2 BNG BNG B . EA 5 BNG 1 209 4 BNG BNG B . FA 6 PEG 1 210 1 PEG PEG B . GA 6 PEG 1 211 3 PEG PEG B . HA 6 PEG 1 212 4 PEG PEG B . IA 6 PEG 1 213 6 PEG PEG B . JA 6 PEG 1 214 13 PEG PEG B . KA 7 1PE 1 215 6 1PE 1PE B . LA 7 1PE 1 216 7 1PE 1PE B . MA 10 CL 1 217 1 CL CL B . NA 11 HOH 1 301 1 HOH HOH A . NA 11 HOH 2 302 2 HOH HOH A . NA 11 HOH 3 303 5 HOH HOH A . NA 11 HOH 4 304 6 HOH HOH A . NA 11 HOH 5 305 10 HOH HOH A . NA 11 HOH 6 306 11 HOH HOH A . NA 11 HOH 7 307 12 HOH HOH A . NA 11 HOH 8 308 13 HOH HOH A . NA 11 HOH 9 309 14 HOH HOH A . NA 11 HOH 10 310 15 HOH HOH A . NA 11 HOH 11 311 16 HOH HOH A . NA 11 HOH 12 312 17 HOH HOH A . NA 11 HOH 13 313 18 HOH HOH A . NA 11 HOH 14 314 19 HOH HOH A . NA 11 HOH 15 315 20 HOH HOH A . NA 11 HOH 16 316 21 HOH HOH A . NA 11 HOH 17 317 22 HOH HOH A . NA 11 HOH 18 318 23 HOH HOH A . NA 11 HOH 19 319 24 HOH HOH A . NA 11 HOH 20 320 26 HOH HOH A . NA 11 HOH 21 321 27 HOH HOH A . NA 11 HOH 22 322 28 HOH HOH A . NA 11 HOH 23 323 32 HOH HOH A . NA 11 HOH 24 324 49 HOH HOH A . NA 11 HOH 25 325 53 HOH HOH A . NA 11 HOH 26 326 58 HOH HOH A . NA 11 HOH 27 327 61 HOH HOH A . NA 11 HOH 28 328 62 HOH HOH A . NA 11 HOH 29 329 63 HOH HOH A . NA 11 HOH 30 330 64 HOH HOH A . NA 11 HOH 31 331 85 HOH HOH A . NA 11 HOH 32 332 88 HOH HOH A . NA 11 HOH 33 333 105 HOH HOH A . OA 11 HOH 1 301 33 HOH HOH B . OA 11 HOH 2 302 34 HOH HOH B . OA 11 HOH 3 303 35 HOH HOH B . OA 11 HOH 4 304 36 HOH HOH B . OA 11 HOH 5 305 37 HOH HOH B . OA 11 HOH 6 306 39 HOH HOH B . OA 11 HOH 7 307 40 HOH HOH B . OA 11 HOH 8 308 41 HOH HOH B . OA 11 HOH 9 309 42 HOH HOH B . OA 11 HOH 10 310 43 HOH HOH B . OA 11 HOH 11 311 44 HOH HOH B . OA 11 HOH 12 312 45 HOH HOH B . OA 11 HOH 13 313 46 HOH HOH B . OA 11 HOH 14 314 47 HOH HOH B . OA 11 HOH 15 315 48 HOH HOH B . OA 11 HOH 16 316 54 HOH HOH B . OA 11 HOH 17 317 55 HOH HOH B . OA 11 HOH 18 318 56 HOH HOH B . OA 11 HOH 19 319 57 HOH HOH B . OA 11 HOH 20 320 60 HOH HOH B . OA 11 HOH 21 321 67 HOH HOH B . OA 11 HOH 22 322 68 HOH HOH B . OA 11 HOH 23 323 69 HOH HOH B . OA 11 HOH 24 324 70 HOH HOH B . OA 11 HOH 25 325 74 HOH HOH B . OA 11 HOH 26 326 75 HOH HOH B . OA 11 HOH 27 327 76 HOH HOH B . OA 11 HOH 28 328 77 HOH HOH B . OA 11 HOH 29 329 81 HOH HOH B . OA 11 HOH 30 330 95 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 software_defined_assembly PISA monomeric 1 2 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,NA 2 1 B,W,X,Y,Z,AA,BA,CA,DA,EA,FA,GA,HA,IA,JA,KA,LA,MA,OA # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id P6G _pdbx_struct_special_symmetry.auth_seq_id 220 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id V _pdbx_struct_special_symmetry.label_comp_id P6G _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-17 2 'Structure model' 1 1 2015-04-01 3 'Structure model' 1 2 2020-07-29 4 'Structure model' 1 3 2023-09-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp 2 3 'Structure model' entity 3 3 'Structure model' pdbx_chem_comp_identifier 4 3 'Structure model' pdbx_entity_nonpoly 5 3 'Structure model' pdbx_struct_special_symmetry 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site 8 3 'Structure model' struct_site_gen 9 4 'Structure model' chem_comp 10 4 'Structure model' chem_comp_atom 11 4 'Structure model' chem_comp_bond 12 4 'Structure model' database_2 13 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_chem_comp.mon_nstd_flag' 2 3 'Structure model' '_chem_comp.name' 3 3 'Structure model' '_chem_comp.type' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_pdbx_entity_nonpoly.name' 6 3 'Structure model' '_struct_ref_seq_dif.details' 7 4 'Structure model' '_chem_comp.pdbx_synonyms' 8 4 'Structure model' '_database_2.pdbx_DOI' 9 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MxCuBE 'data collection' . ? 1 CCP4 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 XDS 'data reduction' . ? 4 XSCALE 'data scaling' . ? 5 CCP4 phasing . ? 6 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TYR A 32 ? ? -163.63 114.28 2 1 PHE A 173 ? ? -145.24 56.60 3 1 LEU B 86 ? ? -123.32 -63.22 4 1 TRP B 138 ? ? -41.05 152.85 5 1 ASN B 181 ? ? -63.85 -173.98 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -9 ? A MET 1 2 1 Y 1 A HIS -8 ? A HIS 2 3 1 Y 1 A HIS -7 ? A HIS 3 4 1 Y 1 A HIS -6 ? A HIS 4 5 1 Y 1 A HIS -5 ? A HIS 5 6 1 Y 1 A HIS -4 ? A HIS 6 7 1 Y 1 A HIS -3 ? A HIS 7 8 1 Y 1 A HIS -2 ? A HIS 8 9 1 Y 1 A HIS -1 ? A HIS 9 10 1 Y 1 A ALA 0 ? A ALA 10 11 1 Y 1 A MET 1 ? A MET 11 12 1 Y 1 A SER 2 ? A SER 12 13 1 Y 1 A ASN 3 ? A ASN 13 14 1 Y 1 A SER 4 ? A SER 14 15 1 Y 1 B MET -9 ? B MET 1 16 1 Y 1 B HIS -8 ? B HIS 2 17 1 Y 1 B HIS -7 ? B HIS 3 18 1 Y 1 B HIS -6 ? B HIS 4 19 1 Y 1 B HIS -5 ? B HIS 5 20 1 Y 1 B HIS -4 ? B HIS 6 21 1 Y 1 B HIS -3 ? B HIS 7 22 1 Y 1 B HIS -2 ? B HIS 8 23 1 Y 1 B HIS -1 ? B HIS 9 24 1 Y 1 B ALA 0 ? B ALA 10 25 1 Y 1 B MET 1 ? B MET 11 26 1 Y 1 B SER 2 ? B SER 12 27 1 Y 1 B ASN 3 ? B ASN 13 28 1 Y 1 B SER 4 ? B SER 14 29 1 Y 1 B LYS 5 ? B LYS 15 30 1 Y 1 B PHE 6 ? B PHE 16 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 1PE OH2 O N N 1 1PE C12 C N N 2 1PE C22 C N N 3 1PE OH3 O N N 4 1PE C13 C N N 5 1PE C23 C N N 6 1PE OH4 O N N 7 1PE C14 C N N 8 1PE C24 C N N 9 1PE OH5 O N N 10 1PE C15 C N N 11 1PE C25 C N N 12 1PE OH6 O N N 13 1PE C16 C N N 14 1PE C26 C N N 15 1PE OH7 O N N 16 1PE HO2 H N N 17 1PE H121 H N N 18 1PE H122 H N N 19 1PE H221 H N N 20 1PE H222 H N N 21 1PE H131 H N N 22 1PE H132 H N N 23 1PE H231 H N N 24 1PE H232 H N N 25 1PE H141 H N N 26 1PE H142 H N N 27 1PE H241 H N N 28 1PE H242 H N N 29 1PE H151 H N N 30 1PE H152 H N N 31 1PE H251 H N N 32 1PE H252 H N N 33 1PE H161 H N N 34 1PE H162 H N N 35 1PE H261 H N N 36 1PE H262 H N N 37 1PE HO7 H N N 38 2VY CM2 C N N 39 2VY N4A N N N 40 2VY CM4 C N N 41 2VY O1 O N N 42 2VY C6 C N N 43 2VY C2 C Y N 44 2VY S1 S Y N 45 2VY C5 C Y N 46 2VY C4 C Y N 47 2VY C3 C Y N 48 2VY C7A C N N 49 2VY C4A C Y N 50 2VY N3A N Y N 51 2VY C2A C Y N 52 2VY N1A N Y N 53 2VY C6A C Y N 54 2VY C5A C Y N 55 2VY H1 H N N 56 2VY H2 H N N 57 2VY H3 H N N 58 2VY H4 H N N 59 2VY H5 H N N 60 2VY H6 H N N 61 2VY H7 H N N 62 2VY H8 H N N 63 2VY H10 H N N 64 2VY H12 H N N 65 2VY H13 H N N 66 2VY H14 H N N 67 2VY H15 H N N 68 ALA N N N N 69 ALA CA C N S 70 ALA C C N N 71 ALA O O N N 72 ALA CB C N N 73 ALA OXT O N N 74 ALA H H N N 75 ALA H2 H N N 76 ALA HA H N N 77 ALA HB1 H N N 78 ALA HB2 H N N 79 ALA HB3 H N N 80 ALA HXT H N N 81 ARG N N N N 82 ARG CA C N S 83 ARG C C N N 84 ARG O O N N 85 ARG CB C N N 86 ARG CG C N N 87 ARG CD C N N 88 ARG NE N N N 89 ARG CZ C N N 90 ARG NH1 N N N 91 ARG NH2 N N N 92 ARG OXT O N N 93 ARG H H N N 94 ARG H2 H N N 95 ARG HA H N N 96 ARG HB2 H N N 97 ARG HB3 H N N 98 ARG HG2 H N N 99 ARG HG3 H N N 100 ARG HD2 H N N 101 ARG HD3 H N N 102 ARG HE H N N 103 ARG HH11 H N N 104 ARG HH12 H N N 105 ARG HH21 H N N 106 ARG HH22 H N N 107 ARG HXT H N N 108 ASN N N N N 109 ASN CA C N S 110 ASN C C N N 111 ASN O O N N 112 ASN CB C N N 113 ASN CG C N N 114 ASN OD1 O N N 115 ASN ND2 N N N 116 ASN OXT O N N 117 ASN H H N N 118 ASN H2 H N N 119 ASN HA H N N 120 ASN HB2 H N N 121 ASN HB3 H N N 122 ASN HD21 H N N 123 ASN HD22 H N N 124 ASN HXT H N N 125 BNG C1 C N R 126 BNG C2 C N R 127 BNG C3 C N S 128 BNG C4 C N S 129 BNG C5 C N R 130 BNG C6 C N N 131 BNG "C1'" C N N 132 BNG "C2'" C N N 133 BNG "C3'" C N N 134 BNG "C4'" C N N 135 BNG "C5'" C N N 136 BNG "C6'" C N N 137 BNG "C7'" C N N 138 BNG "C8'" C N N 139 BNG "C9'" C N N 140 BNG O1 O N N 141 BNG O2 O N N 142 BNG O3 O N N 143 BNG O4 O N N 144 BNG O5 O N N 145 BNG O6 O N N 146 BNG H1 H N N 147 BNG H2 H N N 148 BNG H3 H N N 149 BNG H4 H N N 150 BNG H5 H N N 151 BNG H61 H N N 152 BNG H62 H N N 153 BNG "H1'1" H N N 154 BNG "H1'2" H N N 155 BNG "H2'1" H N N 156 BNG "H2'2" H N N 157 BNG "H3'1" H N N 158 BNG "H3'2" H N N 159 BNG "H4'1" H N N 160 BNG "H4'2" H N N 161 BNG "H5'1" H N N 162 BNG "H5'2" H N N 163 BNG "H6'1" H N N 164 BNG "H6'2" H N N 165 BNG "H7'1" H N N 166 BNG "H7'2" H N N 167 BNG "H8'1" H N N 168 BNG "H8'2" H N N 169 BNG "H9'1" H N N 170 BNG "H9'2" H N N 171 BNG "H9'3" H N N 172 BNG HO2 H N N 173 BNG HO3 H N N 174 BNG HO4 H N N 175 BNG HO6 H N N 176 CL CL CL N N 177 CYS N N N N 178 CYS CA C N R 179 CYS C C N N 180 CYS O O N N 181 CYS CB C N N 182 CYS SG S N N 183 CYS OXT O N N 184 CYS H H N N 185 CYS H2 H N N 186 CYS HA H N N 187 CYS HB2 H N N 188 CYS HB3 H N N 189 CYS HG H N N 190 CYS HXT H N N 191 GLN N N N N 192 GLN CA C N S 193 GLN C C N N 194 GLN O O N N 195 GLN CB C N N 196 GLN CG C N N 197 GLN CD C N N 198 GLN OE1 O N N 199 GLN NE2 N N N 200 GLN OXT O N N 201 GLN H H N N 202 GLN H2 H N N 203 GLN HA H N N 204 GLN HB2 H N N 205 GLN HB3 H N N 206 GLN HG2 H N N 207 GLN HG3 H N N 208 GLN HE21 H N N 209 GLN HE22 H N N 210 GLN HXT H N N 211 GLU N N N N 212 GLU CA C N S 213 GLU C C N N 214 GLU O O N N 215 GLU CB C N N 216 GLU CG C N N 217 GLU CD C N N 218 GLU OE1 O N N 219 GLU OE2 O N N 220 GLU OXT O N N 221 GLU H H N N 222 GLU H2 H N N 223 GLU HA H N N 224 GLU HB2 H N N 225 GLU HB3 H N N 226 GLU HG2 H N N 227 GLU HG3 H N N 228 GLU HE2 H N N 229 GLU HXT H N N 230 GLY N N N N 231 GLY CA C N N 232 GLY C C N N 233 GLY O O N N 234 GLY OXT O N N 235 GLY H H N N 236 GLY H2 H N N 237 GLY HA2 H N N 238 GLY HA3 H N N 239 GLY HXT H N N 240 HIS N N N N 241 HIS CA C N S 242 HIS C C N N 243 HIS O O N N 244 HIS CB C N N 245 HIS CG C Y N 246 HIS ND1 N Y N 247 HIS CD2 C Y N 248 HIS CE1 C Y N 249 HIS NE2 N Y N 250 HIS OXT O N N 251 HIS H H N N 252 HIS H2 H N N 253 HIS HA H N N 254 HIS HB2 H N N 255 HIS HB3 H N N 256 HIS HD1 H N N 257 HIS HD2 H N N 258 HIS HE1 H N N 259 HIS HE2 H N N 260 HIS HXT H N N 261 HOH O O N N 262 HOH H1 H N N 263 HOH H2 H N N 264 ILE N N N N 265 ILE CA C N S 266 ILE C C N N 267 ILE O O N N 268 ILE CB C N S 269 ILE CG1 C N N 270 ILE CG2 C N N 271 ILE CD1 C N N 272 ILE OXT O N N 273 ILE H H N N 274 ILE H2 H N N 275 ILE HA H N N 276 ILE HB H N N 277 ILE HG12 H N N 278 ILE HG13 H N N 279 ILE HG21 H N N 280 ILE HG22 H N N 281 ILE HG23 H N N 282 ILE HD11 H N N 283 ILE HD12 H N N 284 ILE HD13 H N N 285 ILE HXT H N N 286 LEU N N N N 287 LEU CA C N S 288 LEU C C N N 289 LEU O O N N 290 LEU CB C N N 291 LEU CG C N N 292 LEU CD1 C N N 293 LEU CD2 C N N 294 LEU OXT O N N 295 LEU H H N N 296 LEU H2 H N N 297 LEU HA H N N 298 LEU HB2 H N N 299 LEU HB3 H N N 300 LEU HG H N N 301 LEU HD11 H N N 302 LEU HD12 H N N 303 LEU HD13 H N N 304 LEU HD21 H N N 305 LEU HD22 H N N 306 LEU HD23 H N N 307 LEU HXT H N N 308 LYS N N N N 309 LYS CA C N S 310 LYS C C N N 311 LYS O O N N 312 LYS CB C N N 313 LYS CG C N N 314 LYS CD C N N 315 LYS CE C N N 316 LYS NZ N N N 317 LYS OXT O N N 318 LYS H H N N 319 LYS H2 H N N 320 LYS HA H N N 321 LYS HB2 H N N 322 LYS HB3 H N N 323 LYS HG2 H N N 324 LYS HG3 H N N 325 LYS HD2 H N N 326 LYS HD3 H N N 327 LYS HE2 H N N 328 LYS HE3 H N N 329 LYS HZ1 H N N 330 LYS HZ2 H N N 331 LYS HZ3 H N N 332 LYS HXT H N N 333 MET N N N N 334 MET CA C N S 335 MET C C N N 336 MET O O N N 337 MET CB C N N 338 MET CG C N N 339 MET SD S N N 340 MET CE C N N 341 MET OXT O N N 342 MET H H N N 343 MET H2 H N N 344 MET HA H N N 345 MET HB2 H N N 346 MET HB3 H N N 347 MET HG2 H N N 348 MET HG3 H N N 349 MET HE1 H N N 350 MET HE2 H N N 351 MET HE3 H N N 352 MET HXT H N N 353 P6G O1 O N N 354 P6G C2 C N N 355 P6G C3 C N N 356 P6G O4 O N N 357 P6G C5 C N N 358 P6G C6 C N N 359 P6G O7 O N N 360 P6G C8 C N N 361 P6G C9 C N N 362 P6G O10 O N N 363 P6G C11 C N N 364 P6G C12 C N N 365 P6G O13 O N N 366 P6G C14 C N N 367 P6G C15 C N N 368 P6G O16 O N N 369 P6G C17 C N N 370 P6G C18 C N N 371 P6G O19 O N N 372 P6G H1 H N N 373 P6G H21 H N N 374 P6G H22 H N N 375 P6G H31 H N N 376 P6G H32 H N N 377 P6G H51 H N N 378 P6G H52 H N N 379 P6G H61 H N N 380 P6G H62 H N N 381 P6G H81 H N N 382 P6G H82 H N N 383 P6G H91 H N N 384 P6G H92 H N N 385 P6G H111 H N N 386 P6G H112 H N N 387 P6G H121 H N N 388 P6G H122 H N N 389 P6G H141 H N N 390 P6G H142 H N N 391 P6G H151 H N N 392 P6G H152 H N N 393 P6G H171 H N N 394 P6G H172 H N N 395 P6G H181 H N N 396 P6G H182 H N N 397 P6G H19 H N N 398 PEG C1 C N N 399 PEG O1 O N N 400 PEG C2 C N N 401 PEG O2 O N N 402 PEG C3 C N N 403 PEG C4 C N N 404 PEG O4 O N N 405 PEG H11 H N N 406 PEG H12 H N N 407 PEG HO1 H N N 408 PEG H21 H N N 409 PEG H22 H N N 410 PEG H31 H N N 411 PEG H32 H N N 412 PEG H41 H N N 413 PEG H42 H N N 414 PEG HO4 H N N 415 PG0 C5 C N N 416 PG0 O2 O N N 417 PG0 C4 C N N 418 PG0 C3 C N N 419 PG0 O1 O N N 420 PG0 C2 C N N 421 PG0 C1 C N N 422 PG0 OTT O N N 423 PG0 H51 H N N 424 PG0 H52 H N N 425 PG0 H53 H N N 426 PG0 H41 H N N 427 PG0 H42 H N N 428 PG0 H31 H N N 429 PG0 H32 H N N 430 PG0 H21 H N N 431 PG0 H22 H N N 432 PG0 H11 H N N 433 PG0 H12 H N N 434 PG0 HTT H N N 435 PG4 O1 O N N 436 PG4 C1 C N N 437 PG4 C2 C N N 438 PG4 O2 O N N 439 PG4 C3 C N N 440 PG4 C4 C N N 441 PG4 O3 O N N 442 PG4 C5 C N N 443 PG4 C6 C N N 444 PG4 O4 O N N 445 PG4 C7 C N N 446 PG4 C8 C N N 447 PG4 O5 O N N 448 PG4 HO1 H N N 449 PG4 H11 H N N 450 PG4 H12 H N N 451 PG4 H21 H N N 452 PG4 H22 H N N 453 PG4 H31 H N N 454 PG4 H32 H N N 455 PG4 H41 H N N 456 PG4 H42 H N N 457 PG4 H51 H N N 458 PG4 H52 H N N 459 PG4 H61 H N N 460 PG4 H62 H N N 461 PG4 H71 H N N 462 PG4 H72 H N N 463 PG4 H81 H N N 464 PG4 H82 H N N 465 PG4 HO5 H N N 466 PGE C1 C N N 467 PGE O1 O N N 468 PGE C2 C N N 469 PGE O2 O N N 470 PGE C3 C N N 471 PGE C4 C N N 472 PGE O4 O N N 473 PGE C6 C N N 474 PGE C5 C N N 475 PGE O3 O N N 476 PGE H1 H N N 477 PGE H12 H N N 478 PGE HO1 H N N 479 PGE H2 H N N 480 PGE H22 H N N 481 PGE H3 H N N 482 PGE H32 H N N 483 PGE H4 H N N 484 PGE H42 H N N 485 PGE HO4 H N N 486 PGE H6 H N N 487 PGE H62 H N N 488 PGE H5 H N N 489 PGE H52 H N N 490 PHE N N N N 491 PHE CA C N S 492 PHE C C N N 493 PHE O O N N 494 PHE CB C N N 495 PHE CG C Y N 496 PHE CD1 C Y N 497 PHE CD2 C Y N 498 PHE CE1 C Y N 499 PHE CE2 C Y N 500 PHE CZ C Y N 501 PHE OXT O N N 502 PHE H H N N 503 PHE H2 H N N 504 PHE HA H N N 505 PHE HB2 H N N 506 PHE HB3 H N N 507 PHE HD1 H N N 508 PHE HD2 H N N 509 PHE HE1 H N N 510 PHE HE2 H N N 511 PHE HZ H N N 512 PHE HXT H N N 513 PRO N N N N 514 PRO CA C N S 515 PRO C C N N 516 PRO O O N N 517 PRO CB C N N 518 PRO CG C N N 519 PRO CD C N N 520 PRO OXT O N N 521 PRO H H N N 522 PRO HA H N N 523 PRO HB2 H N N 524 PRO HB3 H N N 525 PRO HG2 H N N 526 PRO HG3 H N N 527 PRO HD2 H N N 528 PRO HD3 H N N 529 PRO HXT H N N 530 SER N N N N 531 SER CA C N S 532 SER C C N N 533 SER O O N N 534 SER CB C N N 535 SER OG O N N 536 SER OXT O N N 537 SER H H N N 538 SER H2 H N N 539 SER HA H N N 540 SER HB2 H N N 541 SER HB3 H N N 542 SER HG H N N 543 SER HXT H N N 544 THR N N N N 545 THR CA C N S 546 THR C C N N 547 THR O O N N 548 THR CB C N R 549 THR OG1 O N N 550 THR CG2 C N N 551 THR OXT O N N 552 THR H H N N 553 THR H2 H N N 554 THR HA H N N 555 THR HB H N N 556 THR HG1 H N N 557 THR HG21 H N N 558 THR HG22 H N N 559 THR HG23 H N N 560 THR HXT H N N 561 TRP N N N N 562 TRP CA C N S 563 TRP C C N N 564 TRP O O N N 565 TRP CB C N N 566 TRP CG C Y N 567 TRP CD1 C Y N 568 TRP CD2 C Y N 569 TRP NE1 N Y N 570 TRP CE2 C Y N 571 TRP CE3 C Y N 572 TRP CZ2 C Y N 573 TRP CZ3 C Y N 574 TRP CH2 C Y N 575 TRP OXT O N N 576 TRP H H N N 577 TRP H2 H N N 578 TRP HA H N N 579 TRP HB2 H N N 580 TRP HB3 H N N 581 TRP HD1 H N N 582 TRP HE1 H N N 583 TRP HE3 H N N 584 TRP HZ2 H N N 585 TRP HZ3 H N N 586 TRP HH2 H N N 587 TRP HXT H N N 588 TYR N N N N 589 TYR CA C N S 590 TYR C C N N 591 TYR O O N N 592 TYR CB C N N 593 TYR CG C Y N 594 TYR CD1 C Y N 595 TYR CD2 C Y N 596 TYR CE1 C Y N 597 TYR CE2 C Y N 598 TYR CZ C Y N 599 TYR OH O N N 600 TYR OXT O N N 601 TYR H H N N 602 TYR H2 H N N 603 TYR HA H N N 604 TYR HB2 H N N 605 TYR HB3 H N N 606 TYR HD1 H N N 607 TYR HD2 H N N 608 TYR HE1 H N N 609 TYR HE2 H N N 610 TYR HH H N N 611 TYR HXT H N N 612 VAL N N N N 613 VAL CA C N S 614 VAL C C N N 615 VAL O O N N 616 VAL CB C N N 617 VAL CG1 C N N 618 VAL CG2 C N N 619 VAL OXT O N N 620 VAL H H N N 621 VAL H2 H N N 622 VAL HA H N N 623 VAL HB H N N 624 VAL HG11 H N N 625 VAL HG12 H N N 626 VAL HG13 H N N 627 VAL HG21 H N N 628 VAL HG22 H N N 629 VAL HG23 H N N 630 VAL HXT H N N 631 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 1PE OH2 C12 sing N N 1 1PE OH2 HO2 sing N N 2 1PE C12 C22 sing N N 3 1PE C12 H121 sing N N 4 1PE C12 H122 sing N N 5 1PE C22 OH3 sing N N 6 1PE C22 H221 sing N N 7 1PE C22 H222 sing N N 8 1PE OH3 C23 sing N N 9 1PE C13 C23 sing N N 10 1PE C13 OH4 sing N N 11 1PE C13 H131 sing N N 12 1PE C13 H132 sing N N 13 1PE C23 H231 sing N N 14 1PE C23 H232 sing N N 15 1PE OH4 C24 sing N N 16 1PE C14 C24 sing N N 17 1PE C14 OH5 sing N N 18 1PE C14 H141 sing N N 19 1PE C14 H142 sing N N 20 1PE C24 H241 sing N N 21 1PE C24 H242 sing N N 22 1PE OH5 C25 sing N N 23 1PE C15 C25 sing N N 24 1PE C15 OH6 sing N N 25 1PE C15 H151 sing N N 26 1PE C15 H152 sing N N 27 1PE C25 H251 sing N N 28 1PE C25 H252 sing N N 29 1PE OH6 C26 sing N N 30 1PE C16 C26 sing N N 31 1PE C16 OH7 sing N N 32 1PE C16 H161 sing N N 33 1PE C16 H162 sing N N 34 1PE C26 H261 sing N N 35 1PE C26 H262 sing N N 36 1PE OH7 HO7 sing N N 37 2VY CM2 C2A sing N N 38 2VY C2A N3A doub Y N 39 2VY C2A N1A sing Y N 40 2VY N3A C4A sing Y N 41 2VY N1A C6A doub Y N 42 2VY C4A N4A sing N N 43 2VY C4A C5A doub Y N 44 2VY C2 S1 sing Y N 45 2VY C2 C3 doub Y N 46 2VY S1 C5 sing Y N 47 2VY C6A C5A sing Y N 48 2VY C5A C7A sing N N 49 2VY C3 C7A sing N N 50 2VY C3 C4 sing Y N 51 2VY C5 C4 doub Y N 52 2VY C5 C6 sing N N 53 2VY C4 CM4 sing N N 54 2VY C6 O1 doub N N 55 2VY CM2 H1 sing N N 56 2VY CM2 H2 sing N N 57 2VY CM2 H3 sing N N 58 2VY N4A H4 sing N N 59 2VY N4A H5 sing N N 60 2VY CM4 H6 sing N N 61 2VY CM4 H7 sing N N 62 2VY CM4 H8 sing N N 63 2VY C6 H10 sing N N 64 2VY C2 H12 sing N N 65 2VY C7A H13 sing N N 66 2VY C7A H14 sing N N 67 2VY C6A H15 sing N N 68 ALA N CA sing N N 69 ALA N H sing N N 70 ALA N H2 sing N N 71 ALA CA C sing N N 72 ALA CA CB sing N N 73 ALA CA HA sing N N 74 ALA C O doub N N 75 ALA C OXT sing N N 76 ALA CB HB1 sing N N 77 ALA CB HB2 sing N N 78 ALA CB HB3 sing N N 79 ALA OXT HXT sing N N 80 ARG N CA sing N N 81 ARG N H sing N N 82 ARG N H2 sing N N 83 ARG CA C sing N N 84 ARG CA CB sing N N 85 ARG CA HA sing N N 86 ARG C O doub N N 87 ARG C OXT sing N N 88 ARG CB CG sing N N 89 ARG CB HB2 sing N N 90 ARG CB HB3 sing N N 91 ARG CG CD sing N N 92 ARG CG HG2 sing N N 93 ARG CG HG3 sing N N 94 ARG CD NE sing N N 95 ARG CD HD2 sing N N 96 ARG CD HD3 sing N N 97 ARG NE CZ sing N N 98 ARG NE HE sing N N 99 ARG CZ NH1 sing N N 100 ARG CZ NH2 doub N N 101 ARG NH1 HH11 sing N N 102 ARG NH1 HH12 sing N N 103 ARG NH2 HH21 sing N N 104 ARG NH2 HH22 sing N N 105 ARG OXT HXT sing N N 106 ASN N CA sing N N 107 ASN N H sing N N 108 ASN N H2 sing N N 109 ASN CA C sing N N 110 ASN CA CB sing N N 111 ASN CA HA sing N N 112 ASN C O doub N N 113 ASN C OXT sing N N 114 ASN CB CG sing N N 115 ASN CB HB2 sing N N 116 ASN CB HB3 sing N N 117 ASN CG OD1 doub N N 118 ASN CG ND2 sing N N 119 ASN ND2 HD21 sing N N 120 ASN ND2 HD22 sing N N 121 ASN OXT HXT sing N N 122 BNG C1 C2 sing N N 123 BNG C1 O1 sing N N 124 BNG C1 O5 sing N N 125 BNG C1 H1 sing N N 126 BNG C2 C3 sing N N 127 BNG C2 O2 sing N N 128 BNG C2 H2 sing N N 129 BNG C3 C4 sing N N 130 BNG C3 O3 sing N N 131 BNG C3 H3 sing N N 132 BNG C4 C5 sing N N 133 BNG C4 O4 sing N N 134 BNG C4 H4 sing N N 135 BNG C5 C6 sing N N 136 BNG C5 O5 sing N N 137 BNG C5 H5 sing N N 138 BNG C6 O6 sing N N 139 BNG C6 H61 sing N N 140 BNG C6 H62 sing N N 141 BNG "C1'" "C2'" sing N N 142 BNG "C1'" O1 sing N N 143 BNG "C1'" "H1'1" sing N N 144 BNG "C1'" "H1'2" sing N N 145 BNG "C2'" "C3'" sing N N 146 BNG "C2'" "H2'1" sing N N 147 BNG "C2'" "H2'2" sing N N 148 BNG "C3'" "C4'" sing N N 149 BNG "C3'" "H3'1" sing N N 150 BNG "C3'" "H3'2" sing N N 151 BNG "C4'" "C5'" sing N N 152 BNG "C4'" "H4'1" sing N N 153 BNG "C4'" "H4'2" sing N N 154 BNG "C5'" "C6'" sing N N 155 BNG "C5'" "H5'1" sing N N 156 BNG "C5'" "H5'2" sing N N 157 BNG "C6'" "C7'" sing N N 158 BNG "C6'" "H6'1" sing N N 159 BNG "C6'" "H6'2" sing N N 160 BNG "C7'" "C8'" sing N N 161 BNG "C7'" "H7'1" sing N N 162 BNG "C7'" "H7'2" sing N N 163 BNG "C8'" "C9'" sing N N 164 BNG "C8'" "H8'1" sing N N 165 BNG "C8'" "H8'2" sing N N 166 BNG "C9'" "H9'1" sing N N 167 BNG "C9'" "H9'2" sing N N 168 BNG "C9'" "H9'3" sing N N 169 BNG O2 HO2 sing N N 170 BNG O3 HO3 sing N N 171 BNG O4 HO4 sing N N 172 BNG O6 HO6 sing N N 173 CYS N CA sing N N 174 CYS N H sing N N 175 CYS N H2 sing N N 176 CYS CA C sing N N 177 CYS CA CB sing N N 178 CYS CA HA sing N N 179 CYS C O doub N N 180 CYS C OXT sing N N 181 CYS CB SG sing N N 182 CYS CB HB2 sing N N 183 CYS CB HB3 sing N N 184 CYS SG HG sing N N 185 CYS OXT HXT sing N N 186 GLN N CA sing N N 187 GLN N H sing N N 188 GLN N H2 sing N N 189 GLN CA C sing N N 190 GLN CA CB sing N N 191 GLN CA HA sing N N 192 GLN C O doub N N 193 GLN C OXT sing N N 194 GLN CB CG sing N N 195 GLN CB HB2 sing N N 196 GLN CB HB3 sing N N 197 GLN CG CD sing N N 198 GLN CG HG2 sing N N 199 GLN CG HG3 sing N N 200 GLN CD OE1 doub N N 201 GLN CD NE2 sing N N 202 GLN NE2 HE21 sing N N 203 GLN NE2 HE22 sing N N 204 GLN OXT HXT sing N N 205 GLU N CA sing N N 206 GLU N H sing N N 207 GLU N H2 sing N N 208 GLU CA C sing N N 209 GLU CA CB sing N N 210 GLU CA HA sing N N 211 GLU C O doub N N 212 GLU C OXT sing N N 213 GLU CB CG sing N N 214 GLU CB HB2 sing N N 215 GLU CB HB3 sing N N 216 GLU CG CD sing N N 217 GLU CG HG2 sing N N 218 GLU CG HG3 sing N N 219 GLU CD OE1 doub N N 220 GLU CD OE2 sing N N 221 GLU OE2 HE2 sing N N 222 GLU OXT HXT sing N N 223 GLY N CA sing N N 224 GLY N H sing N N 225 GLY N H2 sing N N 226 GLY CA C sing N N 227 GLY CA HA2 sing N N 228 GLY CA HA3 sing N N 229 GLY C O doub N N 230 GLY C OXT sing N N 231 GLY OXT HXT sing N N 232 HIS N CA sing N N 233 HIS N H sing N N 234 HIS N H2 sing N N 235 HIS CA C sing N N 236 HIS CA CB sing N N 237 HIS CA HA sing N N 238 HIS C O doub N N 239 HIS C OXT sing N N 240 HIS CB CG sing N N 241 HIS CB HB2 sing N N 242 HIS CB HB3 sing N N 243 HIS CG ND1 sing Y N 244 HIS CG CD2 doub Y N 245 HIS ND1 CE1 doub Y N 246 HIS ND1 HD1 sing N N 247 HIS CD2 NE2 sing Y N 248 HIS CD2 HD2 sing N N 249 HIS CE1 NE2 sing Y N 250 HIS CE1 HE1 sing N N 251 HIS NE2 HE2 sing N N 252 HIS OXT HXT sing N N 253 HOH O H1 sing N N 254 HOH O H2 sing N N 255 ILE N CA sing N N 256 ILE N H sing N N 257 ILE N H2 sing N N 258 ILE CA C sing N N 259 ILE CA CB sing N N 260 ILE CA HA sing N N 261 ILE C O doub N N 262 ILE C OXT sing N N 263 ILE CB CG1 sing N N 264 ILE CB CG2 sing N N 265 ILE CB HB sing N N 266 ILE CG1 CD1 sing N N 267 ILE CG1 HG12 sing N N 268 ILE CG1 HG13 sing N N 269 ILE CG2 HG21 sing N N 270 ILE CG2 HG22 sing N N 271 ILE CG2 HG23 sing N N 272 ILE CD1 HD11 sing N N 273 ILE CD1 HD12 sing N N 274 ILE CD1 HD13 sing N N 275 ILE OXT HXT sing N N 276 LEU N CA sing N N 277 LEU N H sing N N 278 LEU N H2 sing N N 279 LEU CA C sing N N 280 LEU CA CB sing N N 281 LEU CA HA sing N N 282 LEU C O doub N N 283 LEU C OXT sing N N 284 LEU CB CG sing N N 285 LEU CB HB2 sing N N 286 LEU CB HB3 sing N N 287 LEU CG CD1 sing N N 288 LEU CG CD2 sing N N 289 LEU CG HG sing N N 290 LEU CD1 HD11 sing N N 291 LEU CD1 HD12 sing N N 292 LEU CD1 HD13 sing N N 293 LEU CD2 HD21 sing N N 294 LEU CD2 HD22 sing N N 295 LEU CD2 HD23 sing N N 296 LEU OXT HXT sing N N 297 LYS N CA sing N N 298 LYS N H sing N N 299 LYS N H2 sing N N 300 LYS CA C sing N N 301 LYS CA CB sing N N 302 LYS CA HA sing N N 303 LYS C O doub N N 304 LYS C OXT sing N N 305 LYS CB CG sing N N 306 LYS CB HB2 sing N N 307 LYS CB HB3 sing N N 308 LYS CG CD sing N N 309 LYS CG HG2 sing N N 310 LYS CG HG3 sing N N 311 LYS CD CE sing N N 312 LYS CD HD2 sing N N 313 LYS CD HD3 sing N N 314 LYS CE NZ sing N N 315 LYS CE HE2 sing N N 316 LYS CE HE3 sing N N 317 LYS NZ HZ1 sing N N 318 LYS NZ HZ2 sing N N 319 LYS NZ HZ3 sing N N 320 LYS OXT HXT sing N N 321 MET N CA sing N N 322 MET N H sing N N 323 MET N H2 sing N N 324 MET CA C sing N N 325 MET CA CB sing N N 326 MET CA HA sing N N 327 MET C O doub N N 328 MET C OXT sing N N 329 MET CB CG sing N N 330 MET CB HB2 sing N N 331 MET CB HB3 sing N N 332 MET CG SD sing N N 333 MET CG HG2 sing N N 334 MET CG HG3 sing N N 335 MET SD CE sing N N 336 MET CE HE1 sing N N 337 MET CE HE2 sing N N 338 MET CE HE3 sing N N 339 MET OXT HXT sing N N 340 P6G O1 C2 sing N N 341 P6G O1 H1 sing N N 342 P6G C2 C3 sing N N 343 P6G C2 H21 sing N N 344 P6G C2 H22 sing N N 345 P6G C3 O4 sing N N 346 P6G C3 H31 sing N N 347 P6G C3 H32 sing N N 348 P6G O4 C5 sing N N 349 P6G C5 C6 sing N N 350 P6G C5 H51 sing N N 351 P6G C5 H52 sing N N 352 P6G C6 O7 sing N N 353 P6G C6 H61 sing N N 354 P6G C6 H62 sing N N 355 P6G O7 C8 sing N N 356 P6G C8 C9 sing N N 357 P6G C8 H81 sing N N 358 P6G C8 H82 sing N N 359 P6G C9 O10 sing N N 360 P6G C9 H91 sing N N 361 P6G C9 H92 sing N N 362 P6G O10 C11 sing N N 363 P6G C11 C12 sing N N 364 P6G C11 H111 sing N N 365 P6G C11 H112 sing N N 366 P6G C12 O13 sing N N 367 P6G C12 H121 sing N N 368 P6G C12 H122 sing N N 369 P6G O13 C14 sing N N 370 P6G C14 C15 sing N N 371 P6G C14 H141 sing N N 372 P6G C14 H142 sing N N 373 P6G C15 O16 sing N N 374 P6G C15 H151 sing N N 375 P6G C15 H152 sing N N 376 P6G O16 C17 sing N N 377 P6G C17 C18 sing N N 378 P6G C17 H171 sing N N 379 P6G C17 H172 sing N N 380 P6G C18 O19 sing N N 381 P6G C18 H181 sing N N 382 P6G C18 H182 sing N N 383 P6G O19 H19 sing N N 384 PEG C1 O1 sing N N 385 PEG C1 C2 sing N N 386 PEG C1 H11 sing N N 387 PEG C1 H12 sing N N 388 PEG O1 HO1 sing N N 389 PEG C2 O2 sing N N 390 PEG C2 H21 sing N N 391 PEG C2 H22 sing N N 392 PEG O2 C3 sing N N 393 PEG C3 C4 sing N N 394 PEG C3 H31 sing N N 395 PEG C3 H32 sing N N 396 PEG C4 O4 sing N N 397 PEG C4 H41 sing N N 398 PEG C4 H42 sing N N 399 PEG O4 HO4 sing N N 400 PG0 C5 O2 sing N N 401 PG0 C5 H51 sing N N 402 PG0 C5 H52 sing N N 403 PG0 C5 H53 sing N N 404 PG0 O2 C4 sing N N 405 PG0 C4 C3 sing N N 406 PG0 C4 H41 sing N N 407 PG0 C4 H42 sing N N 408 PG0 C3 O1 sing N N 409 PG0 C3 H31 sing N N 410 PG0 C3 H32 sing N N 411 PG0 O1 C2 sing N N 412 PG0 C2 C1 sing N N 413 PG0 C2 H21 sing N N 414 PG0 C2 H22 sing N N 415 PG0 C1 OTT sing N N 416 PG0 C1 H11 sing N N 417 PG0 C1 H12 sing N N 418 PG0 OTT HTT sing N N 419 PG4 O1 C1 sing N N 420 PG4 O1 HO1 sing N N 421 PG4 C1 C2 sing N N 422 PG4 C1 H11 sing N N 423 PG4 C1 H12 sing N N 424 PG4 C2 O2 sing N N 425 PG4 C2 H21 sing N N 426 PG4 C2 H22 sing N N 427 PG4 O2 C3 sing N N 428 PG4 C3 C4 sing N N 429 PG4 C3 H31 sing N N 430 PG4 C3 H32 sing N N 431 PG4 C4 O3 sing N N 432 PG4 C4 H41 sing N N 433 PG4 C4 H42 sing N N 434 PG4 O3 C5 sing N N 435 PG4 C5 C6 sing N N 436 PG4 C5 H51 sing N N 437 PG4 C5 H52 sing N N 438 PG4 C6 O4 sing N N 439 PG4 C6 H61 sing N N 440 PG4 C6 H62 sing N N 441 PG4 O4 C7 sing N N 442 PG4 C7 C8 sing N N 443 PG4 C7 H71 sing N N 444 PG4 C7 H72 sing N N 445 PG4 C8 O5 sing N N 446 PG4 C8 H81 sing N N 447 PG4 C8 H82 sing N N 448 PG4 O5 HO5 sing N N 449 PGE C1 O1 sing N N 450 PGE C1 C2 sing N N 451 PGE C1 H1 sing N N 452 PGE C1 H12 sing N N 453 PGE O1 HO1 sing N N 454 PGE C2 O2 sing N N 455 PGE C2 H2 sing N N 456 PGE C2 H22 sing N N 457 PGE O2 C3 sing N N 458 PGE C3 C4 sing N N 459 PGE C3 H3 sing N N 460 PGE C3 H32 sing N N 461 PGE C4 O3 sing N N 462 PGE C4 H4 sing N N 463 PGE C4 H42 sing N N 464 PGE O4 C6 sing N N 465 PGE O4 HO4 sing N N 466 PGE C6 C5 sing N N 467 PGE C6 H6 sing N N 468 PGE C6 H62 sing N N 469 PGE C5 O3 sing N N 470 PGE C5 H5 sing N N 471 PGE C5 H52 sing N N 472 PHE N CA sing N N 473 PHE N H sing N N 474 PHE N H2 sing N N 475 PHE CA C sing N N 476 PHE CA CB sing N N 477 PHE CA HA sing N N 478 PHE C O doub N N 479 PHE C OXT sing N N 480 PHE CB CG sing N N 481 PHE CB HB2 sing N N 482 PHE CB HB3 sing N N 483 PHE CG CD1 doub Y N 484 PHE CG CD2 sing Y N 485 PHE CD1 CE1 sing Y N 486 PHE CD1 HD1 sing N N 487 PHE CD2 CE2 doub Y N 488 PHE CD2 HD2 sing N N 489 PHE CE1 CZ doub Y N 490 PHE CE1 HE1 sing N N 491 PHE CE2 CZ sing Y N 492 PHE CE2 HE2 sing N N 493 PHE CZ HZ sing N N 494 PHE OXT HXT sing N N 495 PRO N CA sing N N 496 PRO N CD sing N N 497 PRO N H sing N N 498 PRO CA C sing N N 499 PRO CA CB sing N N 500 PRO CA HA sing N N 501 PRO C O doub N N 502 PRO C OXT sing N N 503 PRO CB CG sing N N 504 PRO CB HB2 sing N N 505 PRO CB HB3 sing N N 506 PRO CG CD sing N N 507 PRO CG HG2 sing N N 508 PRO CG HG3 sing N N 509 PRO CD HD2 sing N N 510 PRO CD HD3 sing N N 511 PRO OXT HXT sing N N 512 SER N CA sing N N 513 SER N H sing N N 514 SER N H2 sing N N 515 SER CA C sing N N 516 SER CA CB sing N N 517 SER CA HA sing N N 518 SER C O doub N N 519 SER C OXT sing N N 520 SER CB OG sing N N 521 SER CB HB2 sing N N 522 SER CB HB3 sing N N 523 SER OG HG sing N N 524 SER OXT HXT sing N N 525 THR N CA sing N N 526 THR N H sing N N 527 THR N H2 sing N N 528 THR CA C sing N N 529 THR CA CB sing N N 530 THR CA HA sing N N 531 THR C O doub N N 532 THR C OXT sing N N 533 THR CB OG1 sing N N 534 THR CB CG2 sing N N 535 THR CB HB sing N N 536 THR OG1 HG1 sing N N 537 THR CG2 HG21 sing N N 538 THR CG2 HG22 sing N N 539 THR CG2 HG23 sing N N 540 THR OXT HXT sing N N 541 TRP N CA sing N N 542 TRP N H sing N N 543 TRP N H2 sing N N 544 TRP CA C sing N N 545 TRP CA CB sing N N 546 TRP CA HA sing N N 547 TRP C O doub N N 548 TRP C OXT sing N N 549 TRP CB CG sing N N 550 TRP CB HB2 sing N N 551 TRP CB HB3 sing N N 552 TRP CG CD1 doub Y N 553 TRP CG CD2 sing Y N 554 TRP CD1 NE1 sing Y N 555 TRP CD1 HD1 sing N N 556 TRP CD2 CE2 doub Y N 557 TRP CD2 CE3 sing Y N 558 TRP NE1 CE2 sing Y N 559 TRP NE1 HE1 sing N N 560 TRP CE2 CZ2 sing Y N 561 TRP CE3 CZ3 doub Y N 562 TRP CE3 HE3 sing N N 563 TRP CZ2 CH2 doub Y N 564 TRP CZ2 HZ2 sing N N 565 TRP CZ3 CH2 sing Y N 566 TRP CZ3 HZ3 sing N N 567 TRP CH2 HH2 sing N N 568 TRP OXT HXT sing N N 569 TYR N CA sing N N 570 TYR N H sing N N 571 TYR N H2 sing N N 572 TYR CA C sing N N 573 TYR CA CB sing N N 574 TYR CA HA sing N N 575 TYR C O doub N N 576 TYR C OXT sing N N 577 TYR CB CG sing N N 578 TYR CB HB2 sing N N 579 TYR CB HB3 sing N N 580 TYR CG CD1 doub Y N 581 TYR CG CD2 sing Y N 582 TYR CD1 CE1 sing Y N 583 TYR CD1 HD1 sing N N 584 TYR CD2 CE2 doub Y N 585 TYR CD2 HD2 sing N N 586 TYR CE1 CZ doub Y N 587 TYR CE1 HE1 sing N N 588 TYR CE2 CZ sing Y N 589 TYR CE2 HE2 sing N N 590 TYR CZ OH sing N N 591 TYR OH HH sing N N 592 TYR OXT HXT sing N N 593 VAL N CA sing N N 594 VAL N H sing N N 595 VAL N H2 sing N N 596 VAL CA C sing N N 597 VAL CA CB sing N N 598 VAL CA HA sing N N 599 VAL C O doub N N 600 VAL C OXT sing N N 601 VAL CB CG1 sing N N 602 VAL CB CG2 sing N N 603 VAL CB HB sing N N 604 VAL CG1 HG11 sing N N 605 VAL CG1 HG12 sing N N 606 VAL CG1 HG13 sing N N 607 VAL CG2 HG21 sing N N 608 VAL CG2 HG22 sing N N 609 VAL CG2 HG23 sing N N 610 VAL OXT HXT sing N N 611 # _pdbx_chem_comp_identifier.comp_id BNG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-nonylglucoside # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '4-[(4-amino-2-methylpyrimidin-5-yl)methyl]-3-methylthiophene-2-carbaldehyde' 2VY 3 '2-(2-METHOXYETHOXY)ETHANOL' PG0 4 'TETRAETHYLENE GLYCOL' PG4 5 'nonyl beta-D-glucopyranoside' BNG 6 'DI(HYDROXYETHYL)ETHER' PEG 7 'PENTAETHYLENE GLYCOL' 1PE 8 'TRIETHYLENE GLYCOL' PGE 9 'HEXAETHYLENE GLYCOL' P6G 10 'CHLORIDE ION' CL 11 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3RLB _pdbx_initial_refinement_model.details 'pdb entry 3RLB' #