HEADER TRANSPORT PROTEIN 26-FEB-14 4PP0 TITLE STRUCTURE OF THE PBP NOCT-M117N IN COMPLEX WITH PYRONOPALINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NOPALINE-BINDING PERIPLASMIC PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 26-283; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM TUMEFACIENS; SOURCE 3 ORGANISM_TAXID: 176299; SOURCE 4 STRAIN: C58 / ATCC 33970; SOURCE 5 GENE: NOCT, ATU6027, AGR_PTI_67; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PBP, CLASS F, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR S.MORERA,A.VIGOUROUX REVDAT 4 20-SEP-23 4PP0 1 REMARK SEQADV REVDAT 3 14-DEC-16 4PP0 1 TITLE REVDAT 2 29-OCT-14 4PP0 1 TITLE REVDAT 1 22-OCT-14 4PP0 0 JRNL AUTH J.LANG,A.VIGOUROUX,S.PLANAMENTE,A.EL SAHILI,P.BLIN, JRNL AUTH 2 M.AUMONT-NICAISE,Y.DESSAUX,S.MORERA,D.FAURE JRNL TITL AGROBACTERIUM USES A UNIQUE LIGAND-BINDING MODE FOR TRAPPING JRNL TITL 2 OPINES AND ACQUIRING A COMPETITIVE ADVANTAGE IN THE NICHE JRNL TITL 3 CONSTRUCTION ON PLANT HOST. JRNL REF PLOS PATHOG. V. 10 04444 2014 JRNL REFN ISSN 1553-7366 JRNL PMID 25299655 JRNL DOI 10.1371/JOURNAL.PPAT.1004444 REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.99 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 77633 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.168 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.183 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3882 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 1.61 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 5700 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1958 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 5415 REMARK 3 BIN R VALUE (WORKING SET) : 0.1942 REMARK 3 BIN FREE R VALUE : 0.2268 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.00 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 285 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3907 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 101 REMARK 3 SOLVENT ATOMS : 532 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 24.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.07 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.83750 REMARK 3 B22 (A**2) : -0.83750 REMARK 3 B33 (A**2) : 1.67490 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.191 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.073 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.965 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4078 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5479 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1428 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 101 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 577 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4078 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 538 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5328 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.03 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.61 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 16.62 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|* } REMARK 3 ORIGIN FOR THE GROUP (A): 20.5591 -6.9476 -3.1329 REMARK 3 T TENSOR REMARK 3 T11: -0.0680 T22: -0.0316 REMARK 3 T33: -0.0110 T12: 0.0203 REMARK 3 T13: 0.0067 T23: 0.0109 REMARK 3 L TENSOR REMARK 3 L11: 0.6604 L22: 0.7841 REMARK 3 L33: 0.7264 L12: 0.0260 REMARK 3 L13: -0.0294 L23: 0.3151 REMARK 3 S TENSOR REMARK 3 S11: 0.0194 S12: 0.0592 S13: -0.0886 REMARK 3 S21: -0.0083 S22: -0.0163 S23: -0.0830 REMARK 3 S31: 0.0513 S32: 0.0581 S33: -0.0031 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|* } REMARK 3 ORIGIN FOR THE GROUP (A): 54.9255 -0.4173 -14.4520 REMARK 3 T TENSOR REMARK 3 T11: -0.1347 T22: 0.0841 REMARK 3 T33: -0.1232 T12: -0.0062 REMARK 3 T13: 0.0393 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 1.6934 L22: 1.2719 REMARK 3 L33: 0.9793 L12: -0.0685 REMARK 3 L13: -0.1865 L23: 0.1658 REMARK 3 S TENSOR REMARK 3 S11: -0.0606 S12: 0.1597 S13: -0.0890 REMARK 3 S21: -0.1587 S22: 0.0681 S23: -0.0427 REMARK 3 S31: -0.1963 S32: -0.0441 S33: -0.0075 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PP0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000085042. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-MAR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : SI111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 77698 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 23.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4POI REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4K, 0.1 M TRIS, 0.1 M LISO4, PH REMARK 280 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 25.27333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 12.63667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 25 REMARK 465 LYS A 26 REMARK 465 ASP A 27 REMARK 465 LYS A 282 REMARK 465 GLN A 283 REMARK 465 HIS A 284 REMARK 465 HIS A 285 REMARK 465 HIS A 286 REMARK 465 HIS A 287 REMARK 465 HIS A 288 REMARK 465 HIS A 289 REMARK 465 MET B 25 REMARK 465 LYS B 26 REMARK 465 ASP B 27 REMARK 465 GLN B 283 REMARK 465 HIS B 284 REMARK 465 HIS B 285 REMARK 465 HIS B 286 REMARK 465 HIS B 287 REMARK 465 HIS B 288 REMARK 465 HIS B 289 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 94 50.32 -150.96 REMARK 500 ALA B 94 49.55 -150.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OP1 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OP1 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4P0I RELATED DB: PDB REMARK 900 RELATED ID: 4POW RELATED DB: PDB REMARK 900 RELATED ID: 4POX RELATED DB: PDB DBREF 4PP0 A 26 283 UNP P35120 NOCT_AGRT5 26 283 DBREF 4PP0 B 26 283 UNP P35120 NOCT_AGRT5 26 283 SEQADV 4PP0 MET A 25 UNP P35120 INITIATING METHIONINE SEQADV 4PP0 ASN A 117 UNP P35120 MET 117 ENGINEERED MUTATION SEQADV 4PP0 HIS A 284 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS A 285 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS A 286 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS A 287 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS A 288 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS A 289 UNP P35120 EXPRESSION TAG SEQADV 4PP0 MET B 25 UNP P35120 INITIATING METHIONINE SEQADV 4PP0 ASN B 117 UNP P35120 MET 117 ENGINEERED MUTATION SEQADV 4PP0 HIS B 284 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS B 285 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS B 286 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS B 287 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS B 288 UNP P35120 EXPRESSION TAG SEQADV 4PP0 HIS B 289 UNP P35120 EXPRESSION TAG SEQRES 1 A 265 MET LYS ASP TYR LYS SER ILE THR ILE ALA THR GLU GLY SEQRES 2 A 265 SER TYR ALA PRO TYR ASN PHE LYS ASP ALA GLY GLY LYS SEQRES 3 A 265 LEU ILE GLY PHE ASP ILE ASP LEU GLY ASN ASP LEU CYS SEQRES 4 A 265 LYS ARG MET ASN ILE GLU CYS LYS PHE VAL GLU GLN ALA SEQRES 5 A 265 TRP ASP GLY ILE ILE PRO SER LEU THR ALA GLY ARG TYR SEQRES 6 A 265 ASP ALA ILE MET ALA ALA MET GLY ILE GLN PRO ALA ARG SEQRES 7 A 265 GLU LYS VAL ILE ALA PHE SER ARG PRO TYR LEU LEU THR SEQRES 8 A 265 PRO ASN THR PHE LEU THR THR ALA ASP SER PRO LEU LEU SEQRES 9 A 265 LYS THR GLN VAL ALA ILE GLU ASN LEU PRO LEU ASP ASN SEQRES 10 A 265 ILE THR PRO GLU GLN LYS ALA GLU LEU ASP LYS PHE THR SEQRES 11 A 265 LYS ILE PHE GLU GLY VAL LYS PHE GLY VAL GLN ALA GLY SEQRES 12 A 265 THR SER HIS GLU ALA PHE MET LYS GLN MET MET PRO SER SEQRES 13 A 265 VAL GLN ILE SER THR TYR ASP THR ILE ASP ASN VAL VAL SEQRES 14 A 265 MET ASP LEU LYS ALA GLY ARG ILE ASP ALA SER LEU ALA SEQRES 15 A 265 SER VAL SER PHE LEU LYS PRO LEU THR ASP LYS PRO ASP SEQRES 16 A 265 ASN LYS ASP LEU LYS MET PHE GLY PRO ARG MET THR GLY SEQRES 17 A 265 GLY LEU PHE GLY LYS GLY VAL GLY VAL GLY ILE ARG LYS SEQRES 18 A 265 GLU ASP ALA ASP LEU LYS ALA LEU PHE ASP LYS ALA ILE SEQRES 19 A 265 ASP ALA ALA ILE ALA ASP GLY THR VAL GLN LYS LEU SER SEQRES 20 A 265 GLN GLN TRP PHE GLY TYR ASP ALA SER PRO LYS GLN HIS SEQRES 21 A 265 HIS HIS HIS HIS HIS SEQRES 1 B 265 MET LYS ASP TYR LYS SER ILE THR ILE ALA THR GLU GLY SEQRES 2 B 265 SER TYR ALA PRO TYR ASN PHE LYS ASP ALA GLY GLY LYS SEQRES 3 B 265 LEU ILE GLY PHE ASP ILE ASP LEU GLY ASN ASP LEU CYS SEQRES 4 B 265 LYS ARG MET ASN ILE GLU CYS LYS PHE VAL GLU GLN ALA SEQRES 5 B 265 TRP ASP GLY ILE ILE PRO SER LEU THR ALA GLY ARG TYR SEQRES 6 B 265 ASP ALA ILE MET ALA ALA MET GLY ILE GLN PRO ALA ARG SEQRES 7 B 265 GLU LYS VAL ILE ALA PHE SER ARG PRO TYR LEU LEU THR SEQRES 8 B 265 PRO ASN THR PHE LEU THR THR ALA ASP SER PRO LEU LEU SEQRES 9 B 265 LYS THR GLN VAL ALA ILE GLU ASN LEU PRO LEU ASP ASN SEQRES 10 B 265 ILE THR PRO GLU GLN LYS ALA GLU LEU ASP LYS PHE THR SEQRES 11 B 265 LYS ILE PHE GLU GLY VAL LYS PHE GLY VAL GLN ALA GLY SEQRES 12 B 265 THR SER HIS GLU ALA PHE MET LYS GLN MET MET PRO SER SEQRES 13 B 265 VAL GLN ILE SER THR TYR ASP THR ILE ASP ASN VAL VAL SEQRES 14 B 265 MET ASP LEU LYS ALA GLY ARG ILE ASP ALA SER LEU ALA SEQRES 15 B 265 SER VAL SER PHE LEU LYS PRO LEU THR ASP LYS PRO ASP SEQRES 16 B 265 ASN LYS ASP LEU LYS MET PHE GLY PRO ARG MET THR GLY SEQRES 17 B 265 GLY LEU PHE GLY LYS GLY VAL GLY VAL GLY ILE ARG LYS SEQRES 18 B 265 GLU ASP ALA ASP LEU LYS ALA LEU PHE ASP LYS ALA ILE SEQRES 19 B 265 ASP ALA ALA ILE ALA ASP GLY THR VAL GLN LYS LEU SER SEQRES 20 B 265 GLN GLN TRP PHE GLY TYR ASP ALA SER PRO LYS GLN HIS SEQRES 21 B 265 HIS HIS HIS HIS HIS HET OP1 A 301 20 HET EDO A 302 4 HET EDO A 303 4 HET EDO A 304 4 HET EDO A 305 4 HET PEG A 306 7 HET PEG A 307 7 HET EDO A 308 4 HET EDO A 309 4 HET EDO A 310 4 HET OP1 B 301 20 HET PEG B 302 7 HET EDO B 303 4 HET EDO B 304 4 HET EDO B 305 4 HETNAM OP1 1-[(1S)-4-CARBAMIMIDAMIDO-1-CARBOXYBUTYL]-5-OXO-D- HETNAM 2 OP1 PROLINE HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN OP1 PYRONOPALINE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 OP1 2(C11 H18 N4 O5) FORMUL 4 EDO 10(C2 H6 O2) FORMUL 8 PEG 3(C4 H10 O3) FORMUL 18 HOH *532(H2 O) HELIX 1 1 GLY A 53 ASN A 67 1 15 HELIX 2 2 ALA A 76 ASP A 78 5 3 HELIX 3 3 GLY A 79 ALA A 86 1 8 HELIX 4 4 GLN A 99 LYS A 104 1 6 HELIX 5 5 SER A 125 THR A 130 5 6 HELIX 6 6 THR A 143 PHE A 157 1 15 HELIX 7 7 THR A 168 MET A 178 1 11 HELIX 8 8 THR A 188 ALA A 198 1 11 HELIX 9 9 VAL A 208 LYS A 217 1 10 HELIX 10 10 PRO A 218 LYS A 221 5 4 HELIX 11 11 GLY A 232 GLY A 236 5 5 HELIX 12 12 ASP A 247 ASP A 264 1 18 HELIX 13 13 GLY A 265 GLY A 276 1 12 HELIX 14 14 GLY B 53 ASN B 67 1 15 HELIX 15 15 ALA B 76 ASP B 78 5 3 HELIX 16 16 GLY B 79 ALA B 86 1 8 HELIX 17 17 ALA B 101 VAL B 105 5 5 HELIX 18 18 SER B 125 THR B 130 5 6 HELIX 19 19 THR B 143 GLU B 158 1 16 HELIX 20 20 THR B 168 MET B 178 1 11 HELIX 21 21 THR B 188 ALA B 198 1 11 HELIX 22 22 VAL B 208 LYS B 217 1 10 HELIX 23 23 PRO B 218 LYS B 221 5 4 HELIX 24 24 GLY B 232 GLY B 236 5 5 HELIX 25 25 ASP B 247 ASP B 264 1 18 HELIX 26 26 GLY B 265 GLY B 276 1 12 SHEET 1 A 3 GLU A 69 GLU A 74 0 SHEET 2 A 3 SER A 30 THR A 35 1 N ILE A 33 O LYS A 71 SHEET 3 A 3 ALA A 91 ILE A 92 1 O ALA A 91 N ALA A 34 SHEET 1 B 2 PHE A 44 LYS A 45 0 SHEET 2 B 2 LEU A 51 ILE A 52 -1 O ILE A 52 N PHE A 44 SHEET 1 C 2 ALA A 107 PHE A 108 0 SHEET 2 C 2 GLY A 242 ILE A 243 -1 O ILE A 243 N ALA A 107 SHEET 1 D 4 ASN A 136 PRO A 138 0 SHEET 2 D 4 LEU A 223 THR A 231 1 O ARG A 229 N LEU A 137 SHEET 3 D 4 ASN A 117 THR A 122 -1 N ASN A 117 O MET A 230 SHEET 4 D 4 ALA A 203 SER A 207 -1 O ALA A 206 N THR A 118 SHEET 1 E 2 PHE A 162 GLN A 165 0 SHEET 2 E 2 ILE A 183 TYR A 186 1 O SER A 184 N VAL A 164 SHEET 1 F 3 GLU B 69 GLU B 74 0 SHEET 2 F 3 SER B 30 THR B 35 1 N ILE B 33 O LYS B 71 SHEET 3 F 3 ALA B 91 ILE B 92 1 O ALA B 91 N ALA B 34 SHEET 1 G 2 PHE B 44 LYS B 45 0 SHEET 2 G 2 LEU B 51 ILE B 52 -1 O ILE B 52 N PHE B 44 SHEET 1 H 2 ALA B 107 PHE B 108 0 SHEET 2 H 2 GLY B 242 ILE B 243 -1 O ILE B 243 N ALA B 107 SHEET 1 I 4 ASN B 136 PRO B 138 0 SHEET 2 I 4 LEU B 223 THR B 231 1 O ARG B 229 N LEU B 137 SHEET 3 I 4 ASN B 117 THR B 122 -1 N ASN B 117 O MET B 230 SHEET 4 I 4 SER B 204 SER B 207 -1 O ALA B 206 N THR B 118 SHEET 1 J 2 PHE B 162 GLN B 165 0 SHEET 2 J 2 ILE B 183 TYR B 186 1 O SER B 184 N PHE B 162 CISPEP 1 ALA A 40 PRO A 41 0 4.32 CISPEP 2 ALA B 40 PRO B 41 0 2.95 SITE 1 AC1 16 GLU A 36 TYR A 39 TRP A 77 ALA A 94 SITE 2 AC1 16 ALA A 95 GLY A 97 ARG A 102 ASN A 117 SITE 3 AC1 16 GLN A 165 THR A 168 SER A 169 HIS A 170 SITE 4 AC1 16 SER A 207 SER A 209 PHE A 235 HOH A 405 SITE 1 AC2 7 PRO A 41 LYS A 217 TRP A 274 HOH A 408 SITE 2 AC2 7 HOH A 642 HOH A 684 HOH B 555 SITE 1 AC3 4 THR A 32 ARG A 88 TYR A 89 HOH A 593 SITE 1 AC4 3 PRO A 144 HOH A 459 HOH A 704 SITE 1 AC5 5 GLN A 272 TYR A 277 ASP A 278 HOH A 685 SITE 2 AC5 5 HOH A 708 SITE 1 AC6 4 GLN A 75 ALA A 76 GLY A 79 LYS A 155 SITE 1 AC7 5 LYS A 104 LYS A 175 EDO A 310 HOH A 481 SITE 2 AC7 5 HOH A 681 SITE 1 AC8 6 GLU A 103 PRO A 179 SER A 180 GLN A 182 SITE 2 AC8 6 HOH A 443 HOH A 625 SITE 1 AC9 3 ARG A 65 ASN A 67 GLN B 176 SITE 1 BC1 7 LYS A 104 LYS A 175 ILE A 183 THR A 185 SITE 2 BC1 7 PEG A 307 HOH A 421 HOH A 501 SITE 1 BC2 14 GLU B 36 TYR B 39 TRP B 77 ALA B 94 SITE 2 BC2 14 ALA B 95 GLY B 97 ARG B 102 ASN B 117 SITE 3 BC2 14 GLN B 165 THR B 168 SER B 169 HIS B 170 SITE 4 BC2 14 SER B 207 HOH B 401 SITE 1 BC3 5 LEU B 139 ASP B 140 MET B 177 GLY B 233 SITE 2 BC3 5 LEU B 234 SITE 1 BC4 5 ALA B 133 ILE B 134 GLU B 135 ASN B 136 SITE 2 BC4 5 HOH B 563 SITE 1 BC5 3 LYS B 212 ARG B 229 HOH B 568 SITE 1 BC6 8 ALA B 40 PRO B 41 PRO B 213 LEU B 214 SITE 2 BC6 8 LYS B 217 HOH B 413 HOH B 427 HOH B 461 CRYST1 114.560 114.560 37.910 90.00 90.00 120.00 P 32 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008729 0.005040 0.000000 0.00000 SCALE2 0.000000 0.010079 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026378 0.00000