HEADER HYDROLASE 12-MAR-14 4PU6 TITLE CRYSTAL STRUCTURE OF POTASSIUM-DEPENDENT PLANT-TYPE L-ASPARAGINASE TITLE 2 FROM PHASEOLUS VULGARIS IN COMPLEX WITH K+ CATIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-ASPARAGINASE ALPHA SUBUNIT; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: N-TERMINAL SUBUNIT ALPHA (UNP RESIDUES 1-195); COMPND 5 SYNONYM: L-ASPARAGINE AMIDOHYDROLASE; COMPND 6 EC: 3.5.1.1; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: L-ASPARAGINASE BETA SUBUNIT; COMPND 10 CHAIN: B, D; COMPND 11 FRAGMENT: C-TERMINAL SUBUNIT BETA (UNP RESIDUES 196-326); COMPND 12 SYNONYM: L-ASPARAGINE AMIDOHYDROLASE; COMPND 13 EC: 3.5.1.1; COMPND 14 ENGINEERED: YES; COMPND 15 OTHER_DETAILS: SUBUNITS ALPHA (CHAINS A, C) AND BETA (CHAINS B, D) COMPND 16 ARE, RESPECTIVELY, THE N- AND C-TERMINAL PRODUCTS OF AUTOPROTEOLYTIC COMPND 17 CLEAVAGE OF A PRECURSOR. SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PHASEOLUS VULGARIS; SOURCE 3 ORGANISM_COMMON: FRENCH BEAN,KIDNEY BEAN,STRING BEAN; SOURCE 4 ORGANISM_TAXID: 3885; SOURCE 5 GENE: PHAVU_001G025000G; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 MOL_ID: 2; SOURCE 11 ORGANISM_SCIENTIFIC: PHASEOLUS VULGARIS; SOURCE 12 ORGANISM_COMMON: FRENCH BEAN,KIDNEY BEAN,STRING BEAN; SOURCE 13 ORGANISM_TAXID: 3885; SOURCE 14 GENE: PHAVU_001G025000G; SOURCE 15 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 16 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 17 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 18 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS METAL BINDING SITES, POTASSIUM COORDINATION, K-DEPENDENT ENZYME, NTN- KEYWDS 2 HYDROLASE, PLANT PROTEIN, L-ASPARAGINASE, ISOASPARTYL KEYWDS 3 AMINOPEPTIDASE, AMIDOHYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.BEJGER,M.GILSKI,B.IMIOLCZYK,M.JASKOLSKI REVDAT 3 08-NOV-23 4PU6 1 REMARK SEQADV LINK REVDAT 2 22-NOV-17 4PU6 1 REMARK REVDAT 1 03-SEP-14 4PU6 0 JRNL AUTH M.BEJGER,B.IMIOLCZYK,D.CLAVEL,M.GILSKI,A.PAJAK,F.MARSOLAIS, JRNL AUTH 2 M.JASKOLSKI JRNL TITL NA+/K+ EXCHANGE SWITCHES THE CATALYTIC APPARATUS OF JRNL TITL 2 POTASSIUM-DEPENDENT PLANT L-ASPARAGINASE JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 1854 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25004963 JRNL DOI 10.1107/S1399004714008700 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.MICHALSKA,G.BUJACZ,M.JASKOLSKI REMARK 1 TITL CRYSTAL STRUCTURE OF PLANT ASPARAGINASE. REMARK 1 REF J.MOL.BIOL. V. 360 105 2006 REMARK 1 REFN ISSN 0022-2836 REMARK 1 REFERENCE 2 REMARK 1 AUTH K.MICHALSKA,K.BRZEZINSKI,M.JASKOLSKI REMARK 1 TITL CRYSTAL STRUCTURE OF ISOASPARTYL AMINOPEPTIDASE IN COMPLEX REMARK 1 TITL 2 WITH L-ASPARTATE REMARK 1 REF J.BIOL.CHEM. V. 280 28484 2005 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 3 REMARK 1 AUTH K.MICHALSKA,D.BOREK,A.HERNANDEZ-SANTOYO,M.JASKOLSKI REMARK 1 TITL CRYSTAL PACKING OF PLANT-TYPE L-ASPARAGINASE FROM REMARK 1 TITL 2 ESCHERICHIA COLI REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. D64 309 2008 REMARK 1 REFN ISSN 0907-4449 REMARK 1 REFERENCE 4 REMARK 1 AUTH K.MICHALSKA,A.HERNANDEZ-SANTOYO,M.JASKOLSKI REMARK 1 TITL THE MECHANISM OF AUTOCATALYTIC ACTIVATION OF PLANT-TYPE REMARK 1 TITL 2 L-ASPARAGINASES REMARK 1 REF J.BIOL.CHEM. V. 283 13388 2008 REMARK 1 REFN ISSN 0021-9258 REMARK 1 REFERENCE 5 REMARK 1 AUTH K.MICHALSKA,M.JASKOLSKI REMARK 1 TITL STRUCTURAL ASPECTS OF L-ASPARAGINASES, THEIR FRIENDS AND REMARK 1 TITL 2 RELATIONS REMARK 1 REF ACTA BIOCHIM.POL. V. 53 627 2006 REMARK 1 REFN ISSN 0001-527X REMARK 1 REFERENCE 6 REMARK 1 AUTH D.BOREK,K.MICHALSKA,K.BRZEZINSKI,A.KISIEL,J.PODKOWINSKI, REMARK 1 AUTH 2 D.T.BONTHRON,D.KROWARSCH,J.OTLEWSKI,M.JASKOLSKI REMARK 1 TITL EXPRESSION, PURIFICATION AND CATALYTIC ACTIVITY OF LUPINUS REMARK 1 TITL 2 LUTEUS ASPARAGINE -AMIDOHYDROLASE AND ITS ESCHERICHIA COLI REMARK 1 TITL 3 HOMOLOG REMARK 1 REF EUR.J.BIOCHEM. V. 271 3215 2004 REMARK 1 REFN ISSN 0014-2956 REMARK 1 REFERENCE 7 REMARK 1 AUTH D.BOREK,M.JASKOLSKI REMARK 1 TITL CRYSTALLIZATION AND PRELIMINARY CRYSTALLOGRAPHIC STUDIES OF REMARK 1 TITL 2 A NEW L-ASPARAGINASE ENCODED BY ESCHERICHIA COLI GENOME. REMARK 1 REF ACTA CRYSTALLOGR.,SECT.D V. D56 1505 2000 REMARK 1 REFN ISSN 0907-4449 REMARK 1 REFERENCE 8 REMARK 1 AUTH D.BOREK,M.JASKOLSKI REMARK 1 TITL SEQUENCE ANALYSIS OF ENZYMES WITH ASPARAGINASE ACTIVITY REMARK 1 REF ACTA BIOCHIM.POL. V. 48 893 2001 REMARK 1 REFN ISSN 0001-527X REMARK 1 REFERENCE 9 REMARK 1 AUTH J.NOMME,Y.SU,M.KONRAD,A.LAVIE REMARK 1 TITL STRUCTURES OF APO AND PRODUCT-BOUND HUMAN L-ASPARAGINASE: REMARK 1 TITL 2 INSIGHTS INTO THE MECHANISM OF AUTOPROTEOLYSIS AND SUBSTRATE REMARK 1 TITL 3 HYDROLYSIS REMARK 1 REF BIOCHEMISTRY V. 51 6816 2012 REMARK 1 REFN ISSN 0006-2960 REMARK 1 REFERENCE 10 REMARK 1 AUTH Y.SU,C.S.KARAMITROS,J.NOMME,T.MCSORLEY,M.KONRAD,A.LAVIE REMARK 1 TITL FREE GLICYNE ACCELERATES THE AUTOPROTEOLYTIC ACTIVATION OF REMARK 1 TITL 2 HUMAN ASPARAGINASE REMARK 1 REF CHEM.BIOL. V. 20 533 2013 REMARK 1 REFN ISSN 1074-5521 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 32518 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 2.4200 - 2.3000 0.76 3454 111 0.2834 0.3230 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.940 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 57.38 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 4313 REMARK 3 ANGLE : 1.466 5835 REMARK 3 CHIRALITY : 0.091 673 REMARK 3 PLANARITY : 0.005 768 REMARK 3 DIHEDRAL : 14.899 1565 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 22 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7692 28.2384 9.7554 REMARK 3 T TENSOR REMARK 3 T11: 1.0420 T22: 0.3491 REMARK 3 T33: 0.2240 T12: 0.0394 REMARK 3 T13: -0.0479 T23: 0.0029 REMARK 3 L TENSOR REMARK 3 L11: 0.7284 L22: 1.6448 REMARK 3 L33: 2.3402 L12: -0.8754 REMARK 3 L13: 0.8173 L23: -0.0696 REMARK 3 S TENSOR REMARK 3 S11: 0.1302 S12: 0.4564 S13: 0.0037 REMARK 3 S21: -1.0089 S22: -0.0337 S23: -0.0074 REMARK 3 S31: -0.0807 S32: -0.1107 S33: -0.0934 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 118 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.7191 27.1329 23.4807 REMARK 3 T TENSOR REMARK 3 T11: 0.3511 T22: 0.2278 REMARK 3 T33: 0.1969 T12: -0.0469 REMARK 3 T13: 0.0294 T23: -0.0434 REMARK 3 L TENSOR REMARK 3 L11: 1.6650 L22: 3.8548 REMARK 3 L33: 3.1845 L12: 0.0244 REMARK 3 L13: -0.5310 L23: -0.6037 REMARK 3 S TENSOR REMARK 3 S11: 0.1801 S12: 0.0093 S13: 0.0513 REMARK 3 S21: -0.1769 S22: -0.0622 S23: -0.1631 REMARK 3 S31: -0.6821 S32: 0.2140 S33: -0.0924 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 119 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8008 21.6954 35.3971 REMARK 3 T TENSOR REMARK 3 T11: 0.5912 T22: 0.3515 REMARK 3 T33: 0.1278 T12: -0.0622 REMARK 3 T13: 0.1303 T23: -0.0385 REMARK 3 L TENSOR REMARK 3 L11: 0.4646 L22: 1.6417 REMARK 3 L33: 1.1902 L12: -0.1845 REMARK 3 L13: 0.0903 L23: 0.9700 REMARK 3 S TENSOR REMARK 3 S11: 0.0523 S12: -0.4570 S13: 0.2759 REMARK 3 S21: 0.6034 S22: 0.0160 S23: 0.5622 REMARK 3 S31: -0.4903 S32: -0.1716 S33: -0.0601 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.5980 16.5107 17.5464 REMARK 3 T TENSOR REMARK 3 T11: 0.2677 T22: 0.8541 REMARK 3 T33: 1.1422 T12: 0.0838 REMARK 3 T13: -0.2862 T23: -0.0983 REMARK 3 L TENSOR REMARK 3 L11: 5.9161 L22: 0.5255 REMARK 3 L33: 3.0812 L12: -1.6190 REMARK 3 L13: 0.7530 L23: -0.6993 REMARK 3 S TENSOR REMARK 3 S11: 0.0300 S12: 0.4542 S13: -0.3837 REMARK 3 S21: -0.4720 S22: -0.0747 S23: 0.1767 REMARK 3 S31: 0.1911 S32: -0.0227 S33: -0.0399 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 196 THROUGH 247 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0778 20.2248 19.0946 REMARK 3 T TENSOR REMARK 3 T11: 0.3574 T22: 0.2955 REMARK 3 T33: 0.2296 T12: -0.0629 REMARK 3 T13: 0.2087 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.3251 L22: 2.1929 REMARK 3 L33: 2.2064 L12: -0.5201 REMARK 3 L13: -0.4263 L23: -0.5066 REMARK 3 S TENSOR REMARK 3 S11: 0.5550 S12: -0.0669 S13: -0.2180 REMARK 3 S21: -0.9260 S22: -0.2547 S23: -0.3421 REMARK 3 S31: -0.4535 S32: 0.2527 S33: -0.1347 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 248 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.7693 9.1680 13.5253 REMARK 3 T TENSOR REMARK 3 T11: 0.7137 T22: 0.3157 REMARK 3 T33: 0.2087 T12: 0.0512 REMARK 3 T13: -0.0333 T23: -0.0223 REMARK 3 L TENSOR REMARK 3 L11: 3.5743 L22: 4.7435 REMARK 3 L33: 4.7296 L12: 1.2717 REMARK 3 L13: -0.8170 L23: 0.1889 REMARK 3 S TENSOR REMARK 3 S11: 0.0849 S12: 0.5768 S13: -0.2541 REMARK 3 S21: -0.7433 S22: -0.2604 S23: 0.2168 REMARK 3 S31: 0.0819 S32: -0.0577 S33: 0.0750 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 257 THROUGH 267 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.8779 14.3322 11.1185 REMARK 3 T TENSOR REMARK 3 T11: 0.7643 T22: 0.4709 REMARK 3 T33: 0.5765 T12: 0.1138 REMARK 3 T13: 0.7803 T23: 0.1556 REMARK 3 L TENSOR REMARK 3 L11: 1.7649 L22: 3.5593 REMARK 3 L33: 5.0748 L12: 0.1169 REMARK 3 L13: -2.9417 L23: -0.9861 REMARK 3 S TENSOR REMARK 3 S11: -0.0708 S12: 0.0594 S13: -0.1736 REMARK 3 S21: -0.2630 S22: -0.1106 S23: -0.6467 REMARK 3 S31: 0.0633 S32: 0.7546 S33: 0.1067 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 268 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.7374 16.7488 3.0707 REMARK 3 T TENSOR REMARK 3 T11: 1.6030 T22: 0.5159 REMARK 3 T33: -0.7292 T12: 0.1519 REMARK 3 T13: 1.0799 T23: 0.1134 REMARK 3 L TENSOR REMARK 3 L11: 1.8272 L22: 1.2384 REMARK 3 L33: 2.6836 L12: -0.4711 REMARK 3 L13: -0.8442 L23: -0.1625 REMARK 3 S TENSOR REMARK 3 S11: 0.0426 S12: 0.3034 S13: -0.0787 REMARK 3 S21: -0.3612 S22: 0.0980 S23: -0.2501 REMARK 3 S31: -0.0693 S32: 0.3502 S33: -0.0302 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 2 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.7953 -8.3540 30.6371 REMARK 3 T TENSOR REMARK 3 T11: 0.3779 T22: 0.5939 REMARK 3 T33: 1.0105 T12: 0.1774 REMARK 3 T13: 0.0452 T23: 0.2606 REMARK 3 L TENSOR REMARK 3 L11: 1.4817 L22: 2.3182 REMARK 3 L33: 0.8841 L12: -0.1791 REMARK 3 L13: -0.1800 L23: -1.4032 REMARK 3 S TENSOR REMARK 3 S11: -0.2520 S12: -0.2904 S13: -0.2570 REMARK 3 S21: 0.0925 S22: -0.1946 S23: -0.9920 REMARK 3 S31: 0.3507 S32: 0.8771 S33: 0.2753 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 20 THROUGH 80 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.1850 -10.8398 32.4582 REMARK 3 T TENSOR REMARK 3 T11: 0.3873 T22: 0.3762 REMARK 3 T33: 0.7012 T12: 0.0862 REMARK 3 T13: 0.0917 T23: 0.2215 REMARK 3 L TENSOR REMARK 3 L11: 2.5225 L22: 3.4763 REMARK 3 L33: 2.2659 L12: -0.6629 REMARK 3 L13: -0.1882 L23: 0.0136 REMARK 3 S TENSOR REMARK 3 S11: -0.1395 S12: -0.3278 S13: -0.8789 REMARK 3 S21: -0.1686 S22: -0.1312 S23: -0.7529 REMARK 3 S31: 0.0324 S32: 0.4690 S33: 0.2281 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 81 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8393 -1.2574 23.7023 REMARK 3 T TENSOR REMARK 3 T11: 0.3045 T22: 0.2141 REMARK 3 T33: 0.2998 T12: 0.0446 REMARK 3 T13: 0.0698 T23: 0.0428 REMARK 3 L TENSOR REMARK 3 L11: 2.7230 L22: 4.8715 REMARK 3 L33: 3.8042 L12: 0.0562 REMARK 3 L13: 0.2985 L23: -0.1442 REMARK 3 S TENSOR REMARK 3 S11: 0.0651 S12: 0.0186 S13: -0.4305 REMARK 3 S21: -0.7768 S22: -0.0904 S23: 0.1064 REMARK 3 S31: 0.2856 S32: 0.2556 S33: 0.0468 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 104 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.6213 -0.2495 25.6722 REMARK 3 T TENSOR REMARK 3 T11: 0.2111 T22: 0.2685 REMARK 3 T33: 0.4257 T12: -0.0645 REMARK 3 T13: -0.0117 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 0.6746 L22: 3.0861 REMARK 3 L33: 1.3220 L12: -0.4401 REMARK 3 L13: -0.1494 L23: -0.4406 REMARK 3 S TENSOR REMARK 3 S11: 0.1489 S12: -0.0935 S13: -0.5872 REMARK 3 S21: -0.3339 S22: -0.1818 S23: 0.9768 REMARK 3 S31: 0.0702 S32: -0.2760 S33: 0.0534 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 133 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.6942 -6.3739 40.5643 REMARK 3 T TENSOR REMARK 3 T11: 0.5185 T22: 0.3217 REMARK 3 T33: 0.4368 T12: -0.0294 REMARK 3 T13: 0.1429 T23: 0.1667 REMARK 3 L TENSOR REMARK 3 L11: 6.3077 L22: 2.2340 REMARK 3 L33: 5.7479 L12: 1.0206 REMARK 3 L13: 5.0543 L23: 0.9630 REMARK 3 S TENSOR REMARK 3 S11: -0.0930 S12: -0.3240 S13: -0.2214 REMARK 3 S21: 0.7811 S22: -0.2477 S23: 0.1228 REMARK 3 S31: 0.4593 S32: 0.0307 S33: 0.2203 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 145 THROUGH 158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.2286 3.1354 49.7400 REMARK 3 T TENSOR REMARK 3 T11: 0.9936 T22: 0.8394 REMARK 3 T33: 0.6846 T12: 0.0123 REMARK 3 T13: -0.4089 T23: 0.2603 REMARK 3 L TENSOR REMARK 3 L11: 0.8716 L22: 2.7913 REMARK 3 L33: 3.5687 L12: -0.8337 REMARK 3 L13: 0.1863 L23: -2.8365 REMARK 3 S TENSOR REMARK 3 S11: -0.1257 S12: -0.2547 S13: 0.0766 REMARK 3 S21: 0.2282 S22: 0.2241 S23: -0.9556 REMARK 3 S31: -0.3220 S32: 0.4987 S33: 0.0627 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 196 THROUGH 256 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3810 1.1632 24.6332 REMARK 3 T TENSOR REMARK 3 T11: 0.2050 T22: 0.3597 REMARK 3 T33: 0.4953 T12: 0.0316 REMARK 3 T13: 0.0492 T23: 0.1287 REMARK 3 L TENSOR REMARK 3 L11: 2.0732 L22: 3.3707 REMARK 3 L33: 2.2889 L12: 0.2879 REMARK 3 L13: -0.7645 L23: -1.3549 REMARK 3 S TENSOR REMARK 3 S11: -0.1169 S12: -0.0526 S13: -0.3623 REMARK 3 S21: -0.3523 S22: -0.2492 S23: -1.1882 REMARK 3 S31: 0.3251 S32: 0.4751 S33: 0.2236 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 257 THROUGH 268 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4698 5.2294 12.4510 REMARK 3 T TENSOR REMARK 3 T11: 0.8406 T22: 0.6117 REMARK 3 T33: 0.7821 T12: 0.1255 REMARK 3 T13: 0.5410 T23: 0.2071 REMARK 3 L TENSOR REMARK 3 L11: 0.0406 L22: 1.5206 REMARK 3 L33: 2.3085 L12: -0.0021 REMARK 3 L13: 0.0033 L23: -1.8765 REMARK 3 S TENSOR REMARK 3 S11: -0.0476 S12: 0.2936 S13: -0.0470 REMARK 3 S21: -0.5199 S22: 0.0188 S23: -0.3378 REMARK 3 S31: -0.2700 S32: 0.3466 S33: -0.0187 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 269 THROUGH 282 ) REMARK 3 ORIGIN FOR THE GROUP (A): 28.2972 1.9388 15.8565 REMARK 3 T TENSOR REMARK 3 T11: 0.6131 T22: 0.9424 REMARK 3 T33: 1.4532 T12: 0.1411 REMARK 3 T13: 0.5983 T23: 0.3465 REMARK 3 L TENSOR REMARK 3 L11: 1.1665 L22: 0.3215 REMARK 3 L33: 4.3424 L12: -0.4392 REMARK 3 L13: -0.9176 L23: 1.0866 REMARK 3 S TENSOR REMARK 3 S11: -0.0661 S12: 0.1968 S13: 0.0668 REMARK 3 S21: -0.3231 S22: 0.0488 S23: -0.3125 REMARK 3 S31: -0.2555 S32: 0.5741 S33: -0.0063 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 283 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8303 4.1365 24.0551 REMARK 3 T TENSOR REMARK 3 T11: 0.4417 T22: 0.6651 REMARK 3 T33: 1.0558 T12: -0.0401 REMARK 3 T13: 0.2215 T23: 0.1874 REMARK 3 L TENSOR REMARK 3 L11: 1.1720 L22: 1.2557 REMARK 3 L33: 3.9020 L12: -0.5004 REMARK 3 L13: 0.8231 L23: -0.2427 REMARK 3 S TENSOR REMARK 3 S11: -0.4544 S12: 0.1021 S13: 0.2078 REMARK 3 S21: -0.2909 S22: -0.0264 S23: -0.3071 REMARK 3 S31: -0.4479 S32: 0.6485 S33: 0.3615 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 296 THROUGH 326 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.4054 -9.5120 24.4596 REMARK 3 T TENSOR REMARK 3 T11: 0.2833 T22: 0.8642 REMARK 3 T33: 1.5641 T12: 0.2161 REMARK 3 T13: 0.3207 T23: 0.3704 REMARK 3 L TENSOR REMARK 3 L11: 0.0972 L22: 0.7692 REMARK 3 L33: 0.5206 L12: -0.2829 REMARK 3 L13: 0.2049 L23: -0.6292 REMARK 3 S TENSOR REMARK 3 S11: -0.0155 S12: -0.0015 S13: -0.2359 REMARK 3 S21: -0.5800 S22: -0.2594 S23: -0.7336 REMARK 3 S31: 0.3351 S32: 0.6431 S33: 0.1384 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 283 THROUGH 295 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.3842 15.2789 8.1010 REMARK 3 T TENSOR REMARK 3 T11: 1.0464 T22: 0.4545 REMARK 3 T33: 0.2761 T12: 0.1037 REMARK 3 T13: 0.1652 T23: -0.1188 REMARK 3 L TENSOR REMARK 3 L11: 2.9973 L22: 0.8043 REMARK 3 L33: 1.7928 L12: -1.3172 REMARK 3 L13: 0.7545 L23: -0.9369 REMARK 3 S TENSOR REMARK 3 S11: 0.4333 S12: 0.6607 S13: -0.6053 REMARK 3 S21: -0.5319 S22: 0.0821 S23: -0.0050 REMARK 3 S31: 0.5174 S32: 0.1284 S33: -0.3598 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 296 THROUGH 319 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3628 28.3989 7.0689 REMARK 3 T TENSOR REMARK 3 T11: 1.5695 T22: 0.5286 REMARK 3 T33: 0.0481 T12: 0.0760 REMARK 3 T13: 0.3687 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.3961 L22: 0.6454 REMARK 3 L33: 0.7674 L12: -0.4855 REMARK 3 L13: -0.1687 L23: -0.0276 REMARK 3 S TENSOR REMARK 3 S11: 0.2066 S12: 0.4979 S13: 0.2074 REMARK 3 S21: -0.8010 S22: -0.1908 S23: -0.4452 REMARK 3 S31: -0.3361 S32: 0.3275 S33: -0.0632 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 320 THROUGH 326 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7499 30.9709 3.6103 REMARK 3 T TENSOR REMARK 3 T11: 1.3682 T22: 0.6232 REMARK 3 T33: -0.0424 T12: 0.1343 REMARK 3 T13: -0.0595 T23: 0.1189 REMARK 3 L TENSOR REMARK 3 L11: 2.0028 L22: 7.0333 REMARK 3 L33: 2.9621 L12: 9.5496 REMARK 3 L13: 3.3631 L23: 1.1691 REMARK 3 S TENSOR REMARK 3 S11: -0.1931 S12: 0.5983 S13: -0.0773 REMARK 3 S21: -1.0063 S22: 0.2825 S23: -0.4345 REMARK 3 S31: 0.0399 S32: 0.3669 S33: 0.0415 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: H ATOMS WERE ADDED AT RIDING POSITIONS REMARK 4 REMARK 4 4PU6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 18-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000085222. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR, SI REMARK 200 -111 CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32518 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 47.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.06700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.9700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 78.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.90000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.980 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2GEZ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.68 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG3350, 0.1M BIS TRIS PROPANE, REMARK 280 0.2M SODIUM NITRATE, PH 8.5, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.46900 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 63.51750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.33600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 63.51750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.46900 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.33600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 14700 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19850 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -94.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 THR A 159 REMARK 465 ILE A 160 REMARK 465 LEU A 161 REMARK 465 PHE A 162 REMARK 465 ASP A 163 REMARK 465 TYR A 164 REMARK 465 ARG A 165 REMARK 465 ILE A 166 REMARK 465 PRO A 167 REMARK 465 SER A 168 REMARK 465 SER A 169 REMARK 465 ALA A 170 REMARK 465 TYR A 171 REMARK 465 GLU A 172 REMARK 465 THR A 173 REMARK 465 CYS A 174 REMARK 465 GLY A 175 REMARK 465 SER A 176 REMARK 465 GLY A 177 REMARK 465 VAL A 178 REMARK 465 GLU A 179 REMARK 465 SER A 180 REMARK 465 PRO A 181 REMARK 465 LEU A 182 REMARK 465 GLN A 183 REMARK 465 MET A 184 REMARK 465 ASN A 185 REMARK 465 GLY A 186 REMARK 465 LEU A 187 REMARK 465 PRO A 188 REMARK 465 ILE A 189 REMARK 465 SER A 190 REMARK 465 VAL A 191 REMARK 465 TYR A 192 REMARK 465 ALA A 193 REMARK 465 PRO A 194 REMARK 465 GLU A 195 REMARK 465 GLY C -1 REMARK 465 ALA C 0 REMARK 465 MET C 1 REMARK 465 THR C 159 REMARK 465 ILE C 160 REMARK 465 LEU C 161 REMARK 465 PHE C 162 REMARK 465 ASP C 163 REMARK 465 TYR C 164 REMARK 465 ARG C 165 REMARK 465 ILE C 166 REMARK 465 PRO C 167 REMARK 465 SER C 168 REMARK 465 SER C 169 REMARK 465 ALA C 170 REMARK 465 TYR C 171 REMARK 465 GLU C 172 REMARK 465 THR C 173 REMARK 465 CYS C 174 REMARK 465 GLY C 175 REMARK 465 SER C 176 REMARK 465 GLY C 177 REMARK 465 VAL C 178 REMARK 465 GLU C 179 REMARK 465 SER C 180 REMARK 465 PRO C 181 REMARK 465 LEU C 182 REMARK 465 GLN C 183 REMARK 465 MET C 184 REMARK 465 ASN C 185 REMARK 465 GLY C 186 REMARK 465 LEU C 187 REMARK 465 PRO C 188 REMARK 465 ILE C 189 REMARK 465 SER C 190 REMARK 465 VAL C 191 REMARK 465 TYR C 192 REMARK 465 ALA C 193 REMARK 465 PRO C 194 REMARK 465 GLU C 195 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 44 30.23 72.40 REMARK 500 THR A 77 -167.17 -123.30 REMARK 500 TYR A 119 117.70 -161.13 REMARK 500 PHE A 122 -141.23 51.83 REMARK 500 ALA B 233 -78.22 -101.90 REMARK 500 THR B 256 47.33 36.82 REMARK 500 GLU B 286 -18.59 83.32 REMARK 500 MET B 320 115.27 -163.27 REMARK 500 TRP B 325 -113.29 -99.58 REMARK 500 PHE C 122 -140.07 48.45 REMARK 500 ALA D 233 -76.76 -95.64 REMARK 500 CYS D 238 -159.60 -140.52 REMARK 500 ARG D 283 10.55 -163.33 REMARK 500 ASP D 285 82.70 52.50 REMARK 500 GLU D 286 -23.45 67.71 REMARK 500 THR D 315 22.70 -141.63 REMARK 500 GLU D 316 -16.49 65.86 REMARK 500 ILE D 324 -51.07 -133.13 REMARK 500 TRP D 325 -115.24 -99.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 201 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU A 58 O REMARK 620 2 GLU A 59 O 75.4 REMARK 620 3 ASP A 61 O 78.3 84.9 REMARK 620 4 PHE A 64 O 116.8 166.7 102.1 REMARK 620 5 SER A 66 O 124.0 88.0 153.9 80.7 REMARK 620 6 ARG A 68 O 153.3 81.4 86.7 87.7 67.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 202 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 111 O REMARK 620 2 MET A 112 O 71.1 REMARK 620 3 SER A 115 O 75.6 101.1 REMARK 620 4 HIS A 117 O 68.1 132.3 91.8 REMARK 620 5 HOH A 305 O 112.3 85.8 171.1 87.5 REMARK 620 6 HOH A 338 O 156.0 129.3 107.7 87.9 63.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 201 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LEU C 58 O REMARK 620 2 GLU C 59 O 79.0 REMARK 620 3 ASP C 61 O 81.6 85.9 REMARK 620 4 PHE C 64 O 116.5 162.7 103.4 REMARK 620 5 SER C 66 O 128.2 88.6 147.9 75.7 REMARK 620 6 ARG C 68 O 158.4 82.4 86.3 83.6 61.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K C 202 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL C 111 O REMARK 620 2 MET C 112 O 69.8 REMARK 620 3 SER C 115 O 77.1 102.3 REMARK 620 4 HIS C 117 O 73.2 136.6 90.5 REMARK 620 5 HOH C 309 O 105.9 85.1 172.6 84.0 REMARK 620 6 HOH C 329 O 141.6 127.7 121.9 73.6 51.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ASP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K C 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2GEZ RELATED DB: PDB REMARK 900 LUPINUS LUTEUS L-ASPARAGINASE (LLA) REMARK 900 RELATED ID: 2ZAL RELATED DB: PDB REMARK 900 ESCHERICHIA COLI L-ASPARAGINASE (ECAIII) REMARK 900 RELATED ID: 1JN9 RELATED DB: PDB REMARK 900 ESCHERICHIA COLI L-ASPARAGINASE (ECAIII) REMARK 900 RELATED ID: 1K2X RELATED DB: PDB REMARK 900 ESCHERICHIA COLI L-ASPARAGINASE (ECAIII) REMARK 900 RELATED ID: 1T3M RELATED DB: PDB REMARK 900 ESCHERICHIA COLI L-ASPARAGINASE (ECAIII) REMARK 900 RELATED ID: 3C17 RELATED DB: PDB REMARK 900 ESCHERICHIA COLI L-ASPARAGINASE MUTANT (ECAIII T179A) REMARK 900 RELATED ID: 2ZAK RELATED DB: PDB REMARK 900 ESCHERICHIA COLI L-ASPARAGINASE MUTANT (ECAIII T179A) REMARK 900 RELATED ID: 4GDT RELATED DB: PDB REMARK 900 HUMAN ASPARAGINASE-LIKE PROTEIN (HASNASE3) REMARK 900 RELATED ID: 4GDU RELATED DB: PDB REMARK 900 HUMAN ASPARAGINASE-LIKE PROTEIN (HASNASE3) REMARK 900 RELATED ID: 4GDV RELATED DB: PDB REMARK 900 HUMAN ASPARAGINASE-LIKE PROTEIN (HASNASE3) REMARK 900 RELATED ID: 4GDW RELATED DB: PDB REMARK 900 HUMAN ASPARAGINASE-LIKE PROTEIN (HASNASE3) REMARK 900 RELATED ID: 4HLO RELATED DB: PDB REMARK 900 HUMAN ASPARAGINASE-LIKE PROTEIN (HASNASE3) REMARK 900 RELATED ID: 4HLP RELATED DB: PDB REMARK 900 HUMAN ASPARAGINASE-LIKE PROTEIN (HASNASE3) REMARK 900 RELATED ID: 4PV3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF POTASSIUM-DEPENDENT PLANT-TYPE L-ASPARAGINASE REMARK 900 FROM PHASEOLUS VULGARIS IN COMPLEX WITH NA+ CATIONS REMARK 900 RELATED ID: 4PV2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF POTASSIUM-DEPENDENT PLANT-TYPE L-ASPARAGINASE REMARK 900 FROM PHASEOLUS VULGARIS IN COMPLEX WITH K+ AND NA+ CATIONS REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE DIFFERENCE (POLYMORPHISM) AT POSITION 17 REFLECTS A REMARK 999 DIFFERENT CULTIVAR (AC COMPASS). DBREF 4PU6 A 1 195 UNP V7CU13 V7CU13_PHAVU 1 195 DBREF 4PU6 B 196 326 UNP V7CU13 V7CU13_PHAVU 196 326 DBREF 4PU6 C 1 195 UNP V7CU13 V7CU13_PHAVU 1 195 DBREF 4PU6 D 196 326 UNP V7CU13 V7CU13_PHAVU 196 326 SEQADV 4PU6 GLY A -1 UNP V7CU13 EXPRESSION TAG SEQADV 4PU6 ALA A 0 UNP V7CU13 EXPRESSION TAG SEQADV 4PU6 THR A 17 UNP V7CU13 ASN 17 SEE REMARK 999 SEQADV 4PU6 GLY C -1 UNP V7CU13 EXPRESSION TAG SEQADV 4PU6 ALA C 0 UNP V7CU13 EXPRESSION TAG SEQADV 4PU6 THR C 17 UNP V7CU13 ASN 17 SEE REMARK 999 SEQRES 1 A 197 GLY ALA MET GLY GLY TRP ALA ILE ALA VAL HIS GLY GLY SEQRES 2 A 197 ALA GLY VAL ASP PRO THR LEU PRO LEU GLU ARG GLN GLU SEQRES 3 A 197 GLU ALA LYS GLN LEU LEU THR ARG CYS LEU ASN LEU GLY SEQRES 4 A 197 ILE SER ALA LEU ASN SER ASN VAL PRO ALA ILE ASP VAL SEQRES 5 A 197 VAL GLU LEU VAL VAL ARG GLU LEU GLU THR ASP PRO LEU SEQRES 6 A 197 PHE ASN SER GLY ARG GLY SER ALA LEU THR GLU LYS GLY SEQRES 7 A 197 THR VAL GLU MET GLU ALA SER ILE MET ASP GLY PRO LYS SEQRES 8 A 197 ARG ARG CYS GLY ALA VAL SER GLY LEU THR THR VAL LYS SEQRES 9 A 197 ASN PRO ILE SER LEU ALA ARG LEU VAL MET ASP LYS SER SEQRES 10 A 197 PRO HIS SER TYR ILE ALA PHE SER GLY ALA GLU ASP PHE SEQRES 11 A 197 ALA ARG GLN GLN GLY VAL GLU VAL VAL ASP ASN GLU TYR SEQRES 12 A 197 PHE VAL THR PRO ASP ASN VAL GLY MET LEU LYS LEU ALA SEQRES 13 A 197 LYS GLU ALA ASN THR ILE LEU PHE ASP TYR ARG ILE PRO SEQRES 14 A 197 SER SER ALA TYR GLU THR CYS GLY SER GLY VAL GLU SER SEQRES 15 A 197 PRO LEU GLN MET ASN GLY LEU PRO ILE SER VAL TYR ALA SEQRES 16 A 197 PRO GLU SEQRES 1 B 131 THR VAL GLY CYS VAL VAL VAL ASP ARG GLU GLY ARG CYS SEQRES 2 B 131 ALA ALA ALA THR SER THR GLY GLY LEU MET ASN LYS MET SEQRES 3 B 131 THR GLY ARG ILE GLY ASP SER PRO LEU ILE GLY ALA GLY SEQRES 4 B 131 THR TYR ALA CYS ASP VAL CYS GLY VAL SER CYS THR GLY SEQRES 5 B 131 GLU GLY GLU ALA ILE ILE ARG GLY THR LEU ALA ARG GLU SEQRES 6 B 131 VAL ALA ALA VAL MET GLU TYR LYS GLY LEU LYS LEU HIS SEQRES 7 B 131 GLN ALA VAL ASP PHE VAL ILE LYS HIS ARG LEU ASP GLU SEQRES 8 B 131 GLY LYS ALA GLY LEU ILE ALA VAL SER ASN THR GLY GLU SEQRES 9 B 131 VAL ALA CYS GLY PHE ASN CYS ASN GLY MET PHE ARG ALA SEQRES 10 B 131 CYS ALA THR GLU ASP GLY PHE MET GLU VAL ALA ILE TRP SEQRES 11 B 131 ASP SEQRES 1 C 197 GLY ALA MET GLY GLY TRP ALA ILE ALA VAL HIS GLY GLY SEQRES 2 C 197 ALA GLY VAL ASP PRO THR LEU PRO LEU GLU ARG GLN GLU SEQRES 3 C 197 GLU ALA LYS GLN LEU LEU THR ARG CYS LEU ASN LEU GLY SEQRES 4 C 197 ILE SER ALA LEU ASN SER ASN VAL PRO ALA ILE ASP VAL SEQRES 5 C 197 VAL GLU LEU VAL VAL ARG GLU LEU GLU THR ASP PRO LEU SEQRES 6 C 197 PHE ASN SER GLY ARG GLY SER ALA LEU THR GLU LYS GLY SEQRES 7 C 197 THR VAL GLU MET GLU ALA SER ILE MET ASP GLY PRO LYS SEQRES 8 C 197 ARG ARG CYS GLY ALA VAL SER GLY LEU THR THR VAL LYS SEQRES 9 C 197 ASN PRO ILE SER LEU ALA ARG LEU VAL MET ASP LYS SER SEQRES 10 C 197 PRO HIS SER TYR ILE ALA PHE SER GLY ALA GLU ASP PHE SEQRES 11 C 197 ALA ARG GLN GLN GLY VAL GLU VAL VAL ASP ASN GLU TYR SEQRES 12 C 197 PHE VAL THR PRO ASP ASN VAL GLY MET LEU LYS LEU ALA SEQRES 13 C 197 LYS GLU ALA ASN THR ILE LEU PHE ASP TYR ARG ILE PRO SEQRES 14 C 197 SER SER ALA TYR GLU THR CYS GLY SER GLY VAL GLU SER SEQRES 15 C 197 PRO LEU GLN MET ASN GLY LEU PRO ILE SER VAL TYR ALA SEQRES 16 C 197 PRO GLU SEQRES 1 D 131 THR VAL GLY CYS VAL VAL VAL ASP ARG GLU GLY ARG CYS SEQRES 2 D 131 ALA ALA ALA THR SER THR GLY GLY LEU MET ASN LYS MET SEQRES 3 D 131 THR GLY ARG ILE GLY ASP SER PRO LEU ILE GLY ALA GLY SEQRES 4 D 131 THR TYR ALA CYS ASP VAL CYS GLY VAL SER CYS THR GLY SEQRES 5 D 131 GLU GLY GLU ALA ILE ILE ARG GLY THR LEU ALA ARG GLU SEQRES 6 D 131 VAL ALA ALA VAL MET GLU TYR LYS GLY LEU LYS LEU HIS SEQRES 7 D 131 GLN ALA VAL ASP PHE VAL ILE LYS HIS ARG LEU ASP GLU SEQRES 8 D 131 GLY LYS ALA GLY LEU ILE ALA VAL SER ASN THR GLY GLU SEQRES 9 D 131 VAL ALA CYS GLY PHE ASN CYS ASN GLY MET PHE ARG ALA SEQRES 10 D 131 CYS ALA THR GLU ASP GLY PHE MET GLU VAL ALA ILE TRP SEQRES 11 D 131 ASP HET K A 201 1 HET K A 202 1 HET ASP B 501 9 HET K C 201 1 HET K C 202 1 HETNAM K POTASSIUM ION HETNAM ASP ASPARTIC ACID FORMUL 5 K 4(K 1+) FORMUL 7 ASP C4 H7 N O4 FORMUL 10 HOH *114(H2 O) HELIX 1 1 PRO A 19 SER A 43 1 25 HELIX 2 2 PRO A 46 ASP A 61 1 16 HELIX 3 3 PRO A 88 ARG A 90 5 3 HELIX 4 4 ASN A 103 SER A 115 1 13 HELIX 5 5 PHE A 122 GLN A 132 1 11 HELIX 6 6 ASP A 138 VAL A 143 5 6 HELIX 7 7 THR A 144 ALA A 157 1 14 HELIX 8 8 GLU B 248 GLY B 255 1 8 HELIX 9 9 THR B 256 LYS B 268 1 13 HELIX 10 10 LYS B 271 ARG B 283 1 13 HELIX 11 11 PRO C 19 SER C 43 1 25 HELIX 12 12 PRO C 46 ASP C 61 1 16 HELIX 13 13 ASN C 103 SER C 115 1 13 HELIX 14 14 PHE C 122 GLN C 132 1 11 HELIX 15 15 ASP C 138 VAL C 143 5 6 HELIX 16 16 THR C 144 ASN C 158 1 15 HELIX 17 17 GLU D 248 THR D 256 1 9 HELIX 18 18 THR D 256 TYR D 267 1 12 HELIX 19 19 LYS D 271 HIS D 282 1 12 SHEET 1 A 8 TYR A 119 ALA A 121 0 SHEET 2 A 8 ARG A 91 LEU A 98 1 N ALA A 94 O ILE A 120 SHEET 3 A 8 MET A 80 ASP A 86 -1 N MET A 80 O LEU A 98 SHEET 4 A 8 CYS B 208 THR B 214 -1 O THR B 212 N SER A 83 SHEET 5 A 8 VAL B 197 VAL B 202 -1 N VAL B 197 O SER B 213 SHEET 6 A 8 ALA A 5 ALA A 12 -1 N ALA A 5 O VAL B 202 SHEET 7 A 8 MET B 309 THR B 315 -1 O PHE B 310 N GLY A 10 SHEET 8 A 8 MET B 320 ALA B 323 -1 O GLU B 321 N CYS B 313 SHEET 1 B 4 THR B 235 ALA B 237 0 SHEET 2 B 4 CYS B 241 GLY B 247 -1 O VAL B 243 N TYR B 236 SHEET 3 B 4 ALA B 289 SER B 295 -1 O GLY B 290 N THR B 246 SHEET 4 B 4 VAL B 300 PHE B 304 -1 O ALA B 301 N ALA B 293 SHEET 1 C 8 TYR C 119 ALA C 121 0 SHEET 2 C 8 ARG C 91 LEU C 98 1 N ALA C 94 O ILE C 120 SHEET 3 C 8 MET C 80 ASP C 86 -1 N ASP C 86 O ARG C 91 SHEET 4 C 8 CYS D 208 THR D 214 -1 O THR D 212 N SER C 83 SHEET 5 C 8 VAL D 197 VAL D 202 -1 N VAL D 197 O SER D 213 SHEET 6 C 8 ALA C 5 ALA C 12 -1 N HIS C 9 O GLY D 198 SHEET 7 C 8 MET D 309 ALA D 314 -1 O ALA D 312 N VAL C 8 SHEET 8 C 8 MET D 320 ALA D 323 -1 O GLU D 321 N CYS D 313 SHEET 1 D 4 THR D 235 ALA D 237 0 SHEET 2 D 4 CYS D 241 GLY D 247 -1 O VAL D 243 N TYR D 236 SHEET 3 D 4 ALA D 289 SER D 295 -1 O GLY D 290 N THR D 246 SHEET 4 D 4 VAL D 300 PHE D 304 -1 O ALA D 301 N ALA D 293 LINK O LEU A 58 K K A 201 1555 1555 2.93 LINK O GLU A 59 K K A 201 1555 1555 2.95 LINK O ASP A 61 K K A 201 1555 1555 2.52 LINK O PHE A 64 K K A 201 1555 1555 3.10 LINK O SER A 66 K K A 201 1555 1555 2.64 LINK O ARG A 68 K K A 201 1555 1555 2.56 LINK O VAL A 111 K K A 202 1555 1555 2.97 LINK O MET A 112 K K A 202 1555 1555 2.89 LINK O SER A 115 K K A 202 1555 1555 2.65 LINK O HIS A 117 K K A 202 1555 1555 2.70 LINK K K A 202 O HOH A 305 1555 1555 2.55 LINK K K A 202 O HOH A 338 1555 1555 2.99 LINK O LEU C 58 K K C 201 1555 1555 2.85 LINK O GLU C 59 K K C 201 1555 1555 2.86 LINK O ASP C 61 K K C 201 1555 1555 2.58 LINK O PHE C 64 K K C 201 1555 1555 3.19 LINK O SER C 66 K K C 201 1555 1555 2.62 LINK O ARG C 68 K K C 201 1555 1555 2.66 LINK O VAL C 111 K K C 202 1555 1555 2.88 LINK O MET C 112 K K C 202 1555 1555 2.80 LINK O SER C 115 K K C 202 1555 1555 2.45 LINK O HIS C 117 K K C 202 1555 1555 2.67 LINK K K C 202 O HOH C 309 1555 1555 2.46 LINK K K C 202 O HOH C 329 1555 1555 3.42 SITE 1 AC1 6 LEU A 58 GLU A 59 ASP A 61 PHE A 64 SITE 2 AC1 6 SER A 66 ARG A 68 SITE 1 AC2 6 VAL A 111 MET A 112 SER A 115 HIS A 117 SITE 2 AC2 6 HOH A 305 HOH A 338 SITE 1 AC3 10 THR B 196 GLY B 216 ARG B 224 ASP B 227 SITE 2 AC3 10 THR B 246 GLY B 247 GLY B 249 HOH B 604 SITE 3 AC3 10 HOH B 605 HOH B 622 SITE 1 AC4 6 LEU C 58 GLU C 59 ASP C 61 PHE C 64 SITE 2 AC4 6 SER C 66 ARG C 68 SITE 1 AC5 5 VAL C 111 MET C 112 SER C 115 HIS C 117 SITE 2 AC5 5 HOH C 309 CRYST1 56.938 102.672 127.035 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017563 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009740 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007872 0.00000