HEADER SIGNALING PROTEIN 21-MAR-14 4PWU TITLE CRYSTAL STRUCTURE OF A MODULATOR PROTEIN MZRA (KPN_03524) FROM TITLE 2 KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE MGH 78578 AT 2.45 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: MODULATOR PROTEIN MZRA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 272620; SOURCE 4 STRAIN: MGH 78578; SOURCE 5 GENE: MZRA, KPN78578_34950, KPN_03524; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS FERREDOXIN-LIKE FOLD, PF13721 FAMILY (SECD-TM1), STRUCTURAL GENOMICS, KEYWDS 2 JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, PSI-BIOLOGY, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 4 01-FEB-23 4PWU 1 REMARK SEQADV LINK REVDAT 3 24-JAN-18 4PWU 1 JRNL REVDAT 2 11-OCT-17 4PWU 1 REMARK REVDAT 1 18-JUN-14 4PWU 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A MODULATOR PROTEIN MZRA (KPN_03524) JRNL TITL 2 FROM KLEBSIELLA PNEUMONIAE SUBSP. PNEUMONIAE MGH 78578 AT JRNL TITL 3 2.45 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 12226 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.199 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.550 REMARK 3 FREE R VALUE TEST SET COUNT : 556 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.45 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.68 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.57 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2917 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2249 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2786 REMARK 3 BIN R VALUE (WORKING SET) : 0.2232 REMARK 3 BIN FREE R VALUE : 0.2615 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.49 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 131 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2325 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 18 REMARK 3 SOLVENT ATOMS : 17 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 66.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 81.65 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -8.99870 REMARK 3 B22 (A**2) : 15.28750 REMARK 3 B33 (A**2) : -6.28880 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.27670 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.424 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.909 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2388 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3225 ; 3.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1087 ; 4.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 59 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 347 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2388 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 311 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2603 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.84 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.94 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.82 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: {A|33 - 108} REMARK 3 ORIGIN FOR THE GROUP (A): 24.5361 -22.5064 -31.0689 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: -0.2467 REMARK 3 T33: -0.1990 T12: 0.1259 REMARK 3 T13: 0.0267 T23: -0.1096 REMARK 3 L TENSOR REMARK 3 L11: 4.9605 L22: 8.3155 REMARK 3 L33: 5.0045 L12: -1.3390 REMARK 3 L13: -0.6024 L23: 1.4622 REMARK 3 S TENSOR REMARK 3 S11: -0.2035 S12: -0.5510 S13: 0.5090 REMARK 3 S21: 0.0066 S22: 0.1085 S23: 0.2580 REMARK 3 S31: -0.0385 S32: 0.0784 S33: 0.0949 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: {B|34 - 110} REMARK 3 ORIGIN FOR THE GROUP (A): 24.6601 -39.0120 -42.9628 REMARK 3 T TENSOR REMARK 3 T11: 0.1556 T22: -0.3040 REMARK 3 T33: -0.1754 T12: 0.0074 REMARK 3 T13: -0.0391 T23: -0.0320 REMARK 3 L TENSOR REMARK 3 L11: 7.5123 L22: 6.2341 REMARK 3 L33: 9.1186 L12: 2.7349 REMARK 3 L13: 2.3976 L23: 1.3122 REMARK 3 S TENSOR REMARK 3 S11: 0.0648 S12: 0.4004 S13: -0.5076 REMARK 3 S21: 0.5370 S22: 0.1186 S23: 0.0884 REMARK 3 S31: 0.3628 S32: 0.2301 S33: -0.1834 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: {C|34 - 111} REMARK 3 ORIGIN FOR THE GROUP (A): 12.5523 -18.5437 -5.1190 REMARK 3 T TENSOR REMARK 3 T11: 0.0305 T22: -0.1351 REMARK 3 T33: -0.2082 T12: -0.1475 REMARK 3 T13: 0.0937 T23: -0.0398 REMARK 3 L TENSOR REMARK 3 L11: 7.8577 L22: 8.3155 REMARK 3 L33: 5.4567 L12: 3.3408 REMARK 3 L13: 1.6369 L23: -2.4042 REMARK 3 S TENSOR REMARK 3 S11: -0.3217 S12: 0.5694 S13: 0.0256 REMARK 3 S21: -0.0290 S22: 0.2598 S23: -0.0439 REMARK 3 S31: 0.1579 S32: -0.1101 S33: 0.0619 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: {D|34 - 109} REMARK 3 ORIGIN FOR THE GROUP (A): 11.7077 -36.0034 5.6656 REMARK 3 T TENSOR REMARK 3 T11: -0.0101 T22: -0.1704 REMARK 3 T33: -0.1633 T12: 0.0616 REMARK 3 T13: -0.0350 T23: -0.0267 REMARK 3 L TENSOR REMARK 3 L11: 4.2997 L22: 8.3155 REMARK 3 L33: 8.7579 L12: -0.7614 REMARK 3 L13: 1.0294 L23: -2.5970 REMARK 3 S TENSOR REMARK 3 S11: 0.1945 S12: -0.3248 S13: -0.1397 REMARK 3 S21: -0.5456 S22: 0.1462 S23: 0.0023 REMARK 3 S31: -0.1228 S32: -0.4012 S33: -0.3407 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 3. THE MAD PHASES WERE USED AS RESTRAINTS DURING REMARK 3 REFINEMENT. 4. NCS RESTRAINTS WERE APPLIED USING BUSTER'S LSSR REMARK 3 RESTRAINT REPRESENTATION (-AUTONCS). 5. GLYCEROL(GOL) MODELED REMARK 3 ARE PRESENT IN CRYO CONDITION. REMARK 4 REMARK 4 4PWU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000085318. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-DEC-13; NULL REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 5.83 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; Y REMARK 200 RADIATION SOURCE : SSRL; SSRL REMARK 200 BEAMLINE : BL14-1; BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.97934; 0.97959,0.91837,0.97898 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111); NULL REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR; REMARK 200 NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; NULL REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD; NULL REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12229 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.450 REMARK 200 RESOLUTION RANGE LOW (A) : 37.573 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 7.560 REMARK 200 R MERGE (I) : 0.07500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.51 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.67 REMARK 200 R MERGE FOR SHELL (I) : 1.40900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.840 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: THE STRUCTURE WAS SOLVED BY THREE-WAVELENGTH MAD DATA REMARK 200 COLLECTED AT 2.8A RESOLUTION, AND REFINED AGAINST A HIGHER REMARK 200 RESOLUTION DATA (2.45A) COLLECTED FROM THE SAME CRYSTAL. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.40M SODIUM ACETATE, 0.1M SODIUM REMARK 280 CACODYLATE PH 5.83, NANODROP, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 30.88500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.19000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 30.88500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.19000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3950 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 73.70988 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -73.23305 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 206 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 VAL A 32 REMARK 465 ASP A 109 REMARK 465 ASP A 110 REMARK 465 ASN A 111 REMARK 465 SER A 112 REMARK 465 PRO A 113 REMARK 465 THR A 114 REMARK 465 ALA A 115 REMARK 465 TRP A 116 REMARK 465 LEU A 117 REMARK 465 SER A 118 REMARK 465 ARG A 119 REMARK 465 LEU A 120 REMARK 465 ARG A 121 REMARK 465 ASP A 122 REMARK 465 ALA A 123 REMARK 465 PRO A 124 REMARK 465 HIS A 125 REMARK 465 ARG A 126 REMARK 465 LEU A 127 REMARK 465 GLY A 128 REMARK 465 GLY B 0 REMARK 465 VAL B 32 REMARK 465 GLN B 33 REMARK 465 ASN B 111 REMARK 465 SER B 112 REMARK 465 PRO B 113 REMARK 465 THR B 114 REMARK 465 ALA B 115 REMARK 465 TRP B 116 REMARK 465 LEU B 117 REMARK 465 SER B 118 REMARK 465 ARG B 119 REMARK 465 LEU B 120 REMARK 465 ARG B 121 REMARK 465 ASP B 122 REMARK 465 ALA B 123 REMARK 465 PRO B 124 REMARK 465 HIS B 125 REMARK 465 ARG B 126 REMARK 465 LEU B 127 REMARK 465 GLY B 128 REMARK 465 GLY C 0 REMARK 465 VAL C 32 REMARK 465 GLN C 33 REMARK 465 SER C 112 REMARK 465 PRO C 113 REMARK 465 THR C 114 REMARK 465 ALA C 115 REMARK 465 TRP C 116 REMARK 465 LEU C 117 REMARK 465 SER C 118 REMARK 465 ARG C 119 REMARK 465 LEU C 120 REMARK 465 ARG C 121 REMARK 465 ASP C 122 REMARK 465 ALA C 123 REMARK 465 PRO C 124 REMARK 465 HIS C 125 REMARK 465 ARG C 126 REMARK 465 LEU C 127 REMARK 465 GLY C 128 REMARK 465 GLY D 0 REMARK 465 VAL D 32 REMARK 465 GLN D 33 REMARK 465 ASP D 110 REMARK 465 ASN D 111 REMARK 465 SER D 112 REMARK 465 PRO D 113 REMARK 465 THR D 114 REMARK 465 ALA D 115 REMARK 465 TRP D 116 REMARK 465 LEU D 117 REMARK 465 SER D 118 REMARK 465 ARG D 119 REMARK 465 LEU D 120 REMARK 465 ARG D 121 REMARK 465 ASP D 122 REMARK 465 ALA D 123 REMARK 465 PRO D 124 REMARK 465 HIS D 125 REMARK 465 ARG D 126 REMARK 465 LEU D 127 REMARK 465 GLY D 128 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP D 75 57.24 -119.38 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL D 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-418474 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (32-128) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4PWU A 32 128 UNP A6TED5 MZRA_KLEP7 32 128 DBREF 4PWU B 32 128 UNP A6TED5 MZRA_KLEP7 32 128 DBREF 4PWU C 32 128 UNP A6TED5 MZRA_KLEP7 32 128 DBREF 4PWU D 32 128 UNP A6TED5 MZRA_KLEP7 32 128 SEQADV 4PWU GLY A 0 UNP A6TED5 EXPRESSION TAG SEQADV 4PWU GLY B 0 UNP A6TED5 EXPRESSION TAG SEQADV 4PWU GLY C 0 UNP A6TED5 EXPRESSION TAG SEQADV 4PWU GLY D 0 UNP A6TED5 EXPRESSION TAG SEQRES 1 A 98 GLY VAL GLN GLN GLN GLU ALA THR LEU ALA ILE ARG PRO SEQRES 2 A 98 VAL GLY GLN GLY ILE GLY MSE PRO ASP GLY PHE SER VAL SEQRES 3 A 98 TRP HIS HIS LEU ASP ALA ASN GLY ILE ARG PHE LYS SER SEQRES 4 A 98 ILE THR PRO GLN LYS ASP GLY LEU LEU ILE LYS PHE ASP SEQRES 5 A 98 SER THR ALA GLN GLY ALA ALA ALA LYS GLU VAL LEU GLY SEQRES 6 A 98 ARG ALA LEU PRO HIS GLY TYR ILE ILE ALA LEU LEU GLU SEQRES 7 A 98 ASP ASP ASN SER PRO THR ALA TRP LEU SER ARG LEU ARG SEQRES 8 A 98 ASP ALA PRO HIS ARG LEU GLY SEQRES 1 B 98 GLY VAL GLN GLN GLN GLU ALA THR LEU ALA ILE ARG PRO SEQRES 2 B 98 VAL GLY GLN GLY ILE GLY MSE PRO ASP GLY PHE SER VAL SEQRES 3 B 98 TRP HIS HIS LEU ASP ALA ASN GLY ILE ARG PHE LYS SER SEQRES 4 B 98 ILE THR PRO GLN LYS ASP GLY LEU LEU ILE LYS PHE ASP SEQRES 5 B 98 SER THR ALA GLN GLY ALA ALA ALA LYS GLU VAL LEU GLY SEQRES 6 B 98 ARG ALA LEU PRO HIS GLY TYR ILE ILE ALA LEU LEU GLU SEQRES 7 B 98 ASP ASP ASN SER PRO THR ALA TRP LEU SER ARG LEU ARG SEQRES 8 B 98 ASP ALA PRO HIS ARG LEU GLY SEQRES 1 C 98 GLY VAL GLN GLN GLN GLU ALA THR LEU ALA ILE ARG PRO SEQRES 2 C 98 VAL GLY GLN GLY ILE GLY MSE PRO ASP GLY PHE SER VAL SEQRES 3 C 98 TRP HIS HIS LEU ASP ALA ASN GLY ILE ARG PHE LYS SER SEQRES 4 C 98 ILE THR PRO GLN LYS ASP GLY LEU LEU ILE LYS PHE ASP SEQRES 5 C 98 SER THR ALA GLN GLY ALA ALA ALA LYS GLU VAL LEU GLY SEQRES 6 C 98 ARG ALA LEU PRO HIS GLY TYR ILE ILE ALA LEU LEU GLU SEQRES 7 C 98 ASP ASP ASN SER PRO THR ALA TRP LEU SER ARG LEU ARG SEQRES 8 C 98 ASP ALA PRO HIS ARG LEU GLY SEQRES 1 D 98 GLY VAL GLN GLN GLN GLU ALA THR LEU ALA ILE ARG PRO SEQRES 2 D 98 VAL GLY GLN GLY ILE GLY MSE PRO ASP GLY PHE SER VAL SEQRES 3 D 98 TRP HIS HIS LEU ASP ALA ASN GLY ILE ARG PHE LYS SER SEQRES 4 D 98 ILE THR PRO GLN LYS ASP GLY LEU LEU ILE LYS PHE ASP SEQRES 5 D 98 SER THR ALA GLN GLY ALA ALA ALA LYS GLU VAL LEU GLY SEQRES 6 D 98 ARG ALA LEU PRO HIS GLY TYR ILE ILE ALA LEU LEU GLU SEQRES 7 D 98 ASP ASP ASN SER PRO THR ALA TRP LEU SER ARG LEU ARG SEQRES 8 D 98 ASP ALA PRO HIS ARG LEU GLY MODRES 4PWU MSE A 50 MET SELENOMETHIONINE MODRES 4PWU MSE B 50 MET SELENOMETHIONINE MODRES 4PWU MSE C 50 MET SELENOMETHIONINE MODRES 4PWU MSE D 50 MET SELENOMETHIONINE HET MSE A 50 8 HET MSE B 50 8 HET MSE C 50 8 HET MSE D 50 8 HET GOL A 201 6 HET GOL D 201 6 HET GOL D 202 6 HETNAM MSE SELENOMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 4(C5 H11 N O2 SE) FORMUL 5 GOL 3(C3 H8 O3) FORMUL 8 HOH *17(H2 O) HELIX 1 1 ASP A 52 ASN A 63 1 12 HELIX 2 2 SER A 83 LEU A 98 1 16 HELIX 3 3 ASP B 52 ASN B 63 1 12 HELIX 4 4 SER B 83 LEU B 98 1 16 HELIX 5 5 ASP C 52 ASN C 63 1 12 HELIX 6 6 SER C 83 LEU C 98 1 16 HELIX 7 7 ASP D 52 ASN D 63 1 12 HELIX 8 8 SER D 83 LEU D 98 1 16 SHEET 1 A 4 SER A 69 GLN A 73 0 SHEET 2 A 4 GLY A 76 PHE A 81 -1 O LEU A 78 N THR A 71 SHEET 3 A 4 ALA A 37 PRO A 43 -1 N LEU A 39 O ILE A 79 SHEET 4 A 4 TYR A 102 LEU A 107 -1 O ILE A 103 N ARG A 42 SHEET 1 B 4 SER B 69 GLN B 73 0 SHEET 2 B 4 GLY B 76 PHE B 81 -1 O LEU B 78 N THR B 71 SHEET 3 B 4 ALA B 37 PRO B 43 -1 N LEU B 39 O ILE B 79 SHEET 4 B 4 TYR B 102 GLU B 108 -1 O ILE B 103 N ARG B 42 SHEET 1 C 4 SER C 69 GLN C 73 0 SHEET 2 C 4 GLY C 76 PHE C 81 -1 O LEU C 78 N THR C 71 SHEET 3 C 4 ALA C 37 PRO C 43 -1 N ALA C 37 O PHE C 81 SHEET 4 C 4 TYR C 102 GLU C 108 -1 O ILE C 103 N ARG C 42 SHEET 1 D 4 SER D 69 GLN D 73 0 SHEET 2 D 4 GLY D 76 PHE D 81 -1 O LEU D 78 N THR D 71 SHEET 3 D 4 ALA D 37 PRO D 43 -1 N LEU D 39 O ILE D 79 SHEET 4 D 4 TYR D 102 GLU D 108 -1 O ILE D 103 N ARG D 42 LINK C GLY A 49 N MSE A 50 1555 1555 1.35 LINK C MSE A 50 N PRO A 51 1555 1555 1.36 LINK C GLY B 49 N MSE B 50 1555 1555 1.31 LINK C MSE B 50 N PRO B 51 1555 1555 1.37 LINK C GLY C 49 N MSE C 50 1555 1555 1.35 LINK C MSE C 50 N PRO C 51 1555 1555 1.37 LINK C GLY D 49 N MSE D 50 1555 1555 1.32 LINK C MSE D 50 N PRO D 51 1555 1555 1.38 SITE 1 AC1 4 ASP A 61 ARG A 66 PHE A 67 PRO B 72 SITE 1 AC2 3 GLU C 108 ASP C 110 GLY D 101 SITE 1 AC3 5 TRP D 57 ASP D 61 ILE D 65 ARG D 66 SITE 2 AC3 5 PHE D 67 CRYST1 61.770 74.380 74.200 90.00 99.26 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016189 0.000000 0.002639 0.00000 SCALE2 0.000000 0.013444 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013655 0.00000