HEADER TRANSFERASE 27-MAR-14 4PYJ TITLE HUMAN APO-COMT, SINGLE DOMAIN SWAP COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATECHOL O-METHYLTRANSFERASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 51-271; COMPND 5 EC: 2.1.1.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: COMT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METHYLTRANSFERASE, NEUROTRANSMITTER DEGRADATION, CONFORMATIONAL KEYWDS 2 CHANGE, CATECHOLAMINE METABOLISM, CELL MEMBRANE, MEMBRANE, METAL- KEYWDS 3 BINDING, SIGNAL-ANCHOR, ENZYME, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR A.EHLER,J.BENZ,D.SCHLATTER,M.G.RUDOLPH REVDAT 5 03-APR-24 4PYJ 1 REMARK REVDAT 4 28-FEB-24 4PYJ 1 REMARK LINK REVDAT 3 22-NOV-17 4PYJ 1 REMARK REVDAT 2 27-AUG-14 4PYJ 1 JRNL REVDAT 1 11-JUN-14 4PYJ 0 JRNL AUTH A.EHLER,J.BENZ,D.SCHLATTER,M.G.RUDOLPH JRNL TITL MAPPING THE CONFORMATIONAL SPACE ACCESSIBLE TO JRNL TITL 2 CATECHOL-O-METHYLTRANSFERASE. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2163 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25084335 JRNL DOI 10.1107/S1399004714012917 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1439) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.36 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 17.620 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 18903 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 964 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.3681 - 3.6339 1.00 2732 131 0.1586 0.2039 REMARK 3 2 3.6339 - 2.8846 0.99 2590 134 0.2038 0.2937 REMARK 3 3 2.8846 - 2.5200 0.99 2590 137 0.2203 0.2749 REMARK 3 4 2.5200 - 2.2896 0.99 2540 135 0.2220 0.2722 REMARK 3 5 2.2896 - 2.1255 0.98 2548 122 0.2420 0.3229 REMARK 3 6 2.1255 - 2.0002 0.98 2493 157 0.2725 0.3236 REMARK 3 7 2.0002 - 1.9001 0.96 2446 148 0.3452 0.4102 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 32.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1647 REMARK 3 ANGLE : 0.976 2229 REMARK 3 CHIRALITY : 0.037 256 REMARK 3 PLANARITY : 0.004 288 REMARK 3 DIHEDRAL : 13.677 616 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 53 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.5820 -18.5568 -0.3407 REMARK 3 T TENSOR REMARK 3 T11: 0.6244 T22: 0.5817 REMARK 3 T33: 0.3992 T12: -0.1853 REMARK 3 T13: 0.1274 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 3.6424 L22: 3.6544 REMARK 3 L33: 3.6885 L12: 1.0148 REMARK 3 L13: 1.1071 L23: 1.1334 REMARK 3 S TENSOR REMARK 3 S11: 0.0138 S12: -1.8119 S13: -0.2159 REMARK 3 S21: 0.7276 S22: -0.2484 S23: 0.2175 REMARK 3 S31: -0.2878 S32: -0.0232 S33: 0.1408 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 85 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.1291 -13.8963 -8.1721 REMARK 3 T TENSOR REMARK 3 T11: 0.4522 T22: 0.5405 REMARK 3 T33: 0.6159 T12: -0.2165 REMARK 3 T13: 0.1365 T23: -0.1366 REMARK 3 L TENSOR REMARK 3 L11: 2.6609 L22: 4.2654 REMARK 3 L33: 5.2262 L12: 0.6957 REMARK 3 L13: 0.4873 L23: 1.4928 REMARK 3 S TENSOR REMARK 3 S11: 0.4677 S12: -0.8813 S13: 0.7981 REMARK 3 S21: 0.3853 S22: -0.4412 S23: 1.5305 REMARK 3 S31: -0.6484 S32: -1.0535 S33: 0.2521 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 86 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.1962 -3.5386 -17.4137 REMARK 3 T TENSOR REMARK 3 T11: 0.4115 T22: 0.5565 REMARK 3 T33: 0.4876 T12: -0.1165 REMARK 3 T13: 0.0202 T23: 0.0550 REMARK 3 L TENSOR REMARK 3 L11: 1.5196 L22: 1.9845 REMARK 3 L33: 4.5990 L12: -0.3855 REMARK 3 L13: -0.3481 L23: 0.8878 REMARK 3 S TENSOR REMARK 3 S11: 0.1660 S12: -0.1094 S13: 0.3981 REMARK 3 S21: 0.0964 S22: -0.2254 S23: 0.0644 REMARK 3 S31: -0.5833 S32: 0.3282 S33: 0.1258 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 156 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.6905 -17.2708 -14.6027 REMARK 3 T TENSOR REMARK 3 T11: 0.4992 T22: 0.3413 REMARK 3 T33: 0.3073 T12: -0.1100 REMARK 3 T13: 0.0167 T23: -0.0220 REMARK 3 L TENSOR REMARK 3 L11: 3.2211 L22: 1.2562 REMARK 3 L33: 1.3369 L12: 0.6558 REMARK 3 L13: -1.1417 L23: 0.1369 REMARK 3 S TENSOR REMARK 3 S11: -0.1117 S12: 0.1220 S13: -0.2205 REMARK 3 S21: 0.2194 S22: -0.0374 S23: 0.2202 REMARK 3 S31: 0.0920 S32: -0.1341 S33: 0.0967 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 157 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.1301 -20.8766 -17.8360 REMARK 3 T TENSOR REMARK 3 T11: 0.5015 T22: 0.3371 REMARK 3 T33: 0.3356 T12: -0.0238 REMARK 3 T13: 0.0097 T23: -0.0053 REMARK 3 L TENSOR REMARK 3 L11: 2.9440 L22: 1.7667 REMARK 3 L33: 1.5119 L12: 1.1957 REMARK 3 L13: -0.7447 L23: 0.4734 REMARK 3 S TENSOR REMARK 3 S11: -0.0701 S12: -0.0902 S13: -0.5335 REMARK 3 S21: 0.2526 S22: -0.0232 S23: -0.1402 REMARK 3 S31: 0.6501 S32: 0.0443 S33: 0.0131 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 206 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9414 -9.1024 -16.8425 REMARK 3 T TENSOR REMARK 3 T11: 0.3552 T22: 0.3405 REMARK 3 T33: 0.2968 T12: -0.0961 REMARK 3 T13: -0.0333 T23: 0.0243 REMARK 3 L TENSOR REMARK 3 L11: 3.5582 L22: 2.9776 REMARK 3 L33: 3.2622 L12: -0.2323 REMARK 3 L13: -0.3476 L23: 0.6656 REMARK 3 S TENSOR REMARK 3 S11: -0.0831 S12: 0.2137 S13: -0.0531 REMARK 3 S21: 0.0123 S22: 0.0017 S23: -0.2276 REMARK 3 S31: 0.6273 S32: 0.1966 S33: -0.0188 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 207 THROUGH 226 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0524 -4.0616 -17.9166 REMARK 3 T TENSOR REMARK 3 T11: 0.3823 T22: 0.3610 REMARK 3 T33: 0.2812 T12: -0.0911 REMARK 3 T13: -0.0029 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 1.8359 L22: 2.0752 REMARK 3 L33: 2.2522 L12: -0.4993 REMARK 3 L13: -0.1063 L23: 0.8502 REMARK 3 S TENSOR REMARK 3 S11: 0.0463 S12: 0.0508 S13: 0.0911 REMARK 3 S21: -0.0370 S22: 0.0050 S23: -0.0007 REMARK 3 S31: -0.1578 S32: 0.1034 S33: 0.0545 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 227 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.8909 3.3038 -15.6216 REMARK 3 T TENSOR REMARK 3 T11: 0.5374 T22: 0.3652 REMARK 3 T33: 0.3825 T12: -0.0611 REMARK 3 T13: -0.0351 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 2.4031 L22: 2.5501 REMARK 3 L33: 3.5074 L12: 0.5380 REMARK 3 L13: 0.0373 L23: 0.3739 REMARK 3 S TENSOR REMARK 3 S11: -0.0357 S12: -0.0470 S13: 0.4462 REMARK 3 S21: 0.0741 S22: 0.1671 S23: 0.1466 REMARK 3 S31: -0.6108 S32: -0.0684 S33: 0.0757 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 266 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.7751 -2.7208 13.8163 REMARK 3 T TENSOR REMARK 3 T11: 0.6135 T22: 0.4789 REMARK 3 T33: 0.3611 T12: 0.0287 REMARK 3 T13: 0.0486 T23: 0.0119 REMARK 3 L TENSOR REMARK 3 L11: 2.3842 L22: 3.2318 REMARK 3 L33: 6.4266 L12: 1.7741 REMARK 3 L13: 0.5735 L23: 1.4218 REMARK 3 S TENSOR REMARK 3 S11: -0.2573 S12: 0.3120 S13: -0.3432 REMARK 3 S21: -0.0690 S22: 0.2497 S23: -0.0527 REMARK 3 S31: 0.8324 S32: -0.0024 S33: -0.0421 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PYJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000085379. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 18911 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 40.359 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.07428 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7626 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.4 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 1.25358 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.273 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: IN HOUSE MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.28 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.0, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.41350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.41350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 27.44100 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 33.58250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 27.44100 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 33.58250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 64.41350 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 27.44100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.58250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 64.41350 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 27.44100 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 33.58250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -93.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 440 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 51 REMARK 465 GLY A 52 REMARK 465 GLU A 87 REMARK 465 TRP A 88 REMARK 465 ALA A 89 REMARK 465 MET A 90 REMARK 465 ASN A 91 REMARK 465 VAL A 92 REMARK 465 SER A 267 REMARK 465 GLU A 268 REMARK 465 ALA A 269 REMARK 465 GLY A 270 REMARK 465 PRO A 271 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 183 -81.02 -87.94 REMARK 500 ASP A 191 28.54 -146.84 REMARK 500 HIS A 192 -151.92 -110.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 191 OD1 REMARK 620 2 ASP A 219 OD2 83.8 REMARK 620 3 ASN A 220 OD1 80.0 91.6 REMARK 620 4 GLU A 252 OE2 155.6 71.8 98.2 REMARK 620 5 HOH A 412 O 70.9 143.6 59.2 129.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 233 O REMARK 620 2 ARG A 234 O 87.4 REMARK 620 3 SER A 236 O 90.7 101.0 REMARK 620 4 PHE A 239 O 98.0 171.9 85.1 REMARK 620 5 HOH A 443 O 112.8 85.5 156.0 86.8 REMARK 620 6 HOH A 449 O 169.0 85.8 82.1 89.8 75.3 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4P7K RELATED DB: PDB REMARK 900 RELATED ID: 4P7F RELATED DB: PDB REMARK 900 RELATED ID: 4P7G RELATED DB: PDB REMARK 900 RELATED ID: 4P7J RELATED DB: PDB REMARK 900 RELATED ID: 4PYI RELATED DB: PDB REMARK 900 RELATED ID: 4PYK RELATED DB: PDB REMARK 900 RELATED ID: 4PYL RELATED DB: PDB REMARK 900 RELATED ID: 4PYM RELATED DB: PDB REMARK 900 RELATED ID: 4PYN RELATED DB: PDB DBREF 4PYJ A 51 271 UNP P21964 COMT_HUMAN 51 271 SEQRES 1 A 221 MET GLY ASP THR LYS GLU GLN ARG ILE LEU ASN HIS VAL SEQRES 2 A 221 LEU GLN HIS ALA GLU PRO GLY ASN ALA GLN SER VAL LEU SEQRES 3 A 221 GLU ALA ILE ASP THR TYR CYS GLU GLN LYS GLU TRP ALA SEQRES 4 A 221 MET ASN VAL GLY ASP LYS LYS GLY LYS ILE VAL ASP ALA SEQRES 5 A 221 VAL ILE GLN GLU HIS GLN PRO SER VAL LEU LEU GLU LEU SEQRES 6 A 221 GLY ALA TYR CYS GLY TYR SER ALA VAL ARG MET ALA ARG SEQRES 7 A 221 LEU LEU SER PRO GLY ALA ARG LEU ILE THR ILE GLU ILE SEQRES 8 A 221 ASN PRO ASP CYS ALA ALA ILE THR GLN ARG MET VAL ASP SEQRES 9 A 221 PHE ALA GLY VAL LYS ASP LYS VAL THR LEU VAL VAL GLY SEQRES 10 A 221 ALA SER GLN ASP ILE ILE PRO GLN LEU LYS LYS LYS TYR SEQRES 11 A 221 ASP VAL ASP THR LEU ASP MET VAL PHE LEU ASP HIS TRP SEQRES 12 A 221 LYS ASP ARG TYR LEU PRO ASP THR LEU LEU LEU GLU GLU SEQRES 13 A 221 CYS GLY LEU LEU ARG LYS GLY THR VAL LEU LEU ALA ASP SEQRES 14 A 221 ASN VAL ILE CYS PRO GLY ALA PRO ASP PHE LEU ALA HIS SEQRES 15 A 221 VAL ARG GLY SER SER CYS PHE GLU CYS THR HIS TYR GLN SEQRES 16 A 221 SER PHE LEU GLU TYR ARG GLU VAL VAL ASP GLY LEU GLU SEQRES 17 A 221 LYS ALA ILE TYR LYS GLY PRO GLY SER GLU ALA GLY PRO HET NA A 301 1 HET MG A 302 1 HET CL A 303 1 HETNAM NA SODIUM ION HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION FORMUL 2 NA NA 1+ FORMUL 3 MG MG 2+ FORMUL 4 CL CL 1- FORMUL 5 HOH *71(H2 O) HELIX 1 1 ASP A 53 ALA A 67 1 15 HELIX 2 2 ASN A 71 LYS A 86 1 16 HELIX 3 3 LYS A 95 GLN A 108 1 14 HELIX 4 4 GLY A 120 ARG A 128 1 9 HELIX 5 5 ASN A 142 GLY A 157 1 16 HELIX 6 6 VAL A 158 ASP A 160 5 3 HELIX 7 7 ALA A 168 ILE A 173 1 6 HELIX 8 8 GLN A 175 ASP A 181 1 7 HELIX 9 9 TRP A 193 ASP A 195 5 3 HELIX 10 10 ARG A 196 CYS A 207 1 12 HELIX 11 11 ALA A 226 SER A 236 1 11 HELIX 12 12 GLU A 249 VAL A 253 5 5 SHEET 1 A 5 VAL A 162 VAL A 166 0 SHEET 2 A 5 ARG A 135 GLU A 140 1 N THR A 138 O VAL A 165 SHEET 3 A 5 VAL A 111 LEU A 115 1 N LEU A 112 O ILE A 137 SHEET 4 A 5 LEU A 185 LEU A 190 1 O PHE A 189 N LEU A 113 SHEET 5 A 5 LEU A 210 ALA A 218 1 O LEU A 217 N VAL A 188 LINK OD1 ASP A 191 MG MG A 302 1555 1555 2.28 LINK OD2 ASP A 219 MG MG A 302 1555 1555 2.67 LINK OD1 ASN A 220 MG MG A 302 1555 1555 2.35 LINK O VAL A 233 NA NA A 301 1555 1555 2.46 LINK O ARG A 234 NA NA A 301 1555 1555 2.50 LINK O SER A 236 NA NA A 301 1555 1555 2.45 LINK O PHE A 239 NA NA A 301 1555 1555 2.43 LINK OE2 GLU A 252 MG MG A 302 1555 1555 2.42 LINK NA NA A 301 O HOH A 443 1555 1555 2.53 LINK NA NA A 301 O HOH A 449 1555 1555 2.57 LINK MG MG A 302 O HOH A 412 1555 1555 2.23 CISPEP 1 CYS A 223 PRO A 224 0 1.45 SITE 1 AC1 6 VAL A 233 ARG A 234 SER A 236 PHE A 239 SITE 2 AC1 6 HOH A 443 HOH A 449 SITE 1 AC2 5 ASP A 191 ASP A 219 ASN A 220 GLU A 252 SITE 2 AC2 5 HOH A 412 SITE 1 AC3 6 TYR A 118 CYS A 119 GLY A 120 TYR A 121 SITE 2 AC3 6 SER A 122 HOH A 415 CRYST1 54.882 67.165 128.827 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018221 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014889 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007762 0.00000