HEADER TRANSFERASE/TRANSFERASE INHIBITOR 27-MAR-14 4PYQ TITLE HUMANIZED RAT APO-COMT IN COMPLEX WITH A UREIDO-BENZAMIDINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CATECHOL O-METHYLTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 44-264; COMPND 5 EC: 2.1.1.6; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: BROWN RAT,RAT,RATS; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: COMT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS METHYLTRANSFERASE, NEUROTRANSMITTER DEGRADATION, ALTERNATIVE KEYWDS 2 INITIATION, CATECHOLAMINE METABOLISM, CELL MEMBRANE, MAGNESIUM, KEYWDS 3 MEMBRANE, METAL-BINDING, PHOSPHOPROTEIN, SIGNAL-ANCHOR, KEYWDS 4 TRANSMEMBRANE ANCHOR, ENZYME MECHANISM, CONFORMATIONAL CHANGE, KEYWDS 5 TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.EHLER,J.BENZ,D.SCHLATTER,M.G.RUDOLPH REVDAT 3 28-FEB-24 4PYQ 1 REMARK SEQADV LINK REVDAT 2 27-AUG-14 4PYQ 1 JRNL REVDAT 1 11-JUN-14 4PYQ 0 JRNL AUTH A.EHLER,J.BENZ,D.SCHLATTER,M.G.RUDOLPH JRNL TITL MAPPING THE CONFORMATIONAL SPACE ACCESSIBLE TO JRNL TITL 2 CATECHOL-O-METHYLTRANSFERASE. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 2163 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 25084335 JRNL DOI 10.1107/S1399004714012917 REMARK 2 REMARK 2 RESOLUTION. 1.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1589) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 91056 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.143 REMARK 3 R VALUE (WORKING SET) : 0.132 REMARK 3 FREE R VALUE : 0.161 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 4574 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.4186 - 3.7695 0.95 4338 240 0.0927 0.1297 REMARK 3 2 3.7695 - 2.9924 0.94 4285 230 0.1001 0.1360 REMARK 3 3 2.9924 - 2.6143 0.95 4349 202 0.1224 0.1600 REMARK 3 4 2.6143 - 2.3753 0.94 4306 218 0.1336 0.1603 REMARK 3 5 2.3753 - 2.2051 0.95 4322 214 0.1405 0.1739 REMARK 3 6 2.2051 - 2.0751 0.94 4277 231 0.1536 0.1841 REMARK 3 7 2.0751 - 1.9712 0.95 4327 233 0.1602 0.2006 REMARK 3 8 1.9712 - 1.8854 0.95 4350 218 0.1676 0.1807 REMARK 3 9 1.8854 - 1.8128 0.95 4330 224 0.1675 0.1807 REMARK 3 10 1.8128 - 1.7502 0.94 4287 261 0.1720 0.1824 REMARK 3 11 1.7502 - 1.6955 0.95 4326 238 0.1768 0.1964 REMARK 3 12 1.6955 - 1.6470 0.95 4334 230 0.1848 0.2061 REMARK 3 13 1.6470 - 1.6037 0.95 4339 249 0.1908 0.2127 REMARK 3 14 1.6037 - 1.5646 0.95 4304 243 0.2012 0.2357 REMARK 3 15 1.5646 - 1.5290 0.95 4333 222 0.2109 0.2053 REMARK 3 16 1.5290 - 1.4964 0.95 4364 246 0.2181 0.2530 REMARK 3 17 1.4964 - 1.4665 0.96 4386 198 0.2507 0.2928 REMARK 3 18 1.4665 - 1.4388 0.95 4320 231 0.2655 0.2863 REMARK 3 19 1.4388 - 1.4131 0.95 4324 212 0.3118 0.3301 REMARK 3 20 1.4131 - 1.3892 0.94 4288 220 0.3436 0.3592 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.870 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5000 REMARK 3 OPERATOR: K,H,-L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3521 REMARK 3 ANGLE : 1.333 4782 REMARK 3 CHIRALITY : 0.068 533 REMARK 3 PLANARITY : 0.006 613 REMARK 3 DIHEDRAL : 15.345 1335 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4PYQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-MAR-14. REMARK 100 THE DEPOSITION ID IS D_1000085386. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91065 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.390 REMARK 200 RESOLUTION RANGE LOW (A) : 36.400 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.01000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.491 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 62.68300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.19005 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 25.76233 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 62.68300 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 36.19005 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 25.76233 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 62.68300 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 36.19005 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 25.76233 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 72.38009 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 51.52467 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 72.38009 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 51.52467 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 72.38009 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 51.52467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -104.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 44 REMARK 465 GLY A 45 REMARK 465 SER A 259 REMARK 465 SER A 260 REMARK 465 PRO A 261 REMARK 465 ASP A 262 REMARK 465 LYS A 263 REMARK 465 SER A 264 REMARK 465 MET B 44 REMARK 465 GLY B 45 REMARK 465 SER B 259 REMARK 465 SER B 260 REMARK 465 PRO B 261 REMARK 465 ASP B 262 REMARK 465 LYS B 263 REMARK 465 SER B 264 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 448 O HOH B 487 1.89 REMARK 500 O HOH A 460 O HOH A 463 1.93 REMARK 500 O HOH A 460 O HOH A 464 1.95 REMARK 500 O HOH B 486 O HOH B 489 1.97 REMARK 500 O HOH B 422 O HOH B 423 2.02 REMARK 500 O HOH B 453 O HOH B 455 2.04 REMARK 500 O HOH A 405 O HOH A 437 2.06 REMARK 500 O HOH B 419 O HOH B 420 2.07 REMARK 500 O HOH A 440 O HOH A 456 2.09 REMARK 500 O HOH B 477 O HOH B 485 2.11 REMARK 500 O HOH A 450 O HOH A 458 2.12 REMARK 500 O HOH B 431 O HOH B 465 2.13 REMARK 500 O HOH A 468 O HOH B 407 2.14 REMARK 500 OD1 ASP B 188 O HOH B 485 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CD GLU A 70 OE2 GLU B 70 3555 1.91 REMARK 500 OE2 GLU A 70 OE2 GLU B 70 3555 1.96 REMARK 500 OE1 GLU A 70 OE2 GLU B 70 3555 2.13 REMARK 500 OD2 ASP B 153 OG1 THR B 177 2555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 84 53.13 39.39 REMARK 500 LYS A 89 -45.10 -138.86 REMARK 500 SER A 101 67.22 39.24 REMARK 500 TYR A 111 -76.73 -98.40 REMARK 500 LYS A 171 -72.77 -59.84 REMARK 500 ASP A 176 -63.44 -97.70 REMARK 500 HIS A 185 -60.78 82.77 REMARK 500 THR A 219 46.64 36.90 REMARK 500 LEU A 241 -137.09 47.81 REMARK 500 ALA B 82 129.27 -175.22 REMARK 500 LYS B 89 -48.80 -131.56 REMARK 500 TYR B 111 -67.79 -101.85 REMARK 500 LYS B 171 -76.13 -54.97 REMARK 500 ASP B 176 -61.63 -95.85 REMARK 500 HIS B 185 -78.85 76.76 REMARK 500 THR B 219 42.52 35.59 REMARK 500 LEU B 241 -127.02 46.66 REMARK 500 TYR B 243 -152.28 -116.27 REMARK 500 TYR B 243 -153.39 -115.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 226 O REMARK 620 2 ARG A 227 O 92.4 REMARK 620 3 SER A 229 O 86.9 105.4 REMARK 620 4 PHE A 232 O 95.6 163.3 89.6 REMARK 620 5 GLU B 242 O 165.1 76.1 87.0 97.9 REMARK 620 6 HOH B 401 O 100.9 83.2 168.3 81.0 87.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 301 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 242 O REMARK 620 2 HOH A 489 O 87.6 REMARK 620 3 VAL B 226 O 165.7 100.9 REMARK 620 4 ARG B 227 O 82.6 82.3 87.1 REMARK 620 5 SER B 229 O 78.0 165.1 94.0 99.2 REMARK 620 6 PHE B 232 O 97.6 83.5 94.9 165.7 94.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2X1 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2X1 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 306 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4P7K RELATED DB: PDB REMARK 900 RELATED ID: 4P7F RELATED DB: PDB REMARK 900 RELATED ID: 4P7G RELATED DB: PDB REMARK 900 RELATED ID: 4P7J RELATED DB: PDB REMARK 900 RELATED ID: 4PYJ RELATED DB: PDB REMARK 900 RELATED ID: 4PYI RELATED DB: PDB REMARK 900 RELATED ID: 4PYK RELATED DB: PDB REMARK 900 RELATED ID: 4PYL RELATED DB: PDB REMARK 900 RELATED ID: 4PYM RELATED DB: PDB REMARK 900 RELATED ID: 4PYN RELATED DB: PDB REMARK 900 RELATED ID: 4PYO RELATED DB: PDB DBREF 4PYQ A 44 264 UNP P22734 COMT_RAT 44 264 DBREF 4PYQ B 44 264 UNP P22734 COMT_RAT 44 264 SEQADV 4PYQ ILE A 134 UNP P22734 MET 134 ENGINEERED MUTATION SEQADV 4PYQ CYS A 138 UNP P22734 TYR 138 ENGINEERED MUTATION SEQADV 4PYQ ILE B 134 UNP P22734 MET 134 ENGINEERED MUTATION SEQADV 4PYQ CYS B 138 UNP P22734 TYR 138 ENGINEERED MUTATION SEQRES 1 A 221 MET GLY ASP THR LYS GLU GLN ARG ILE LEU ARG TYR VAL SEQRES 2 A 221 GLN GLN ASN ALA LYS PRO GLY ASP PRO GLN SER VAL LEU SEQRES 3 A 221 GLU ALA ILE ASP THR TYR CYS THR GLN LYS GLU TRP ALA SEQRES 4 A 221 MET ASN VAL GLY ASP ALA LYS GLY GLN ILE MET ASP ALA SEQRES 5 A 221 VAL ILE ARG GLU TYR SER PRO SER LEU VAL LEU GLU LEU SEQRES 6 A 221 GLY ALA TYR CYS GLY TYR SER ALA VAL ARG MET ALA ARG SEQRES 7 A 221 LEU LEU GLN PRO GLY ALA ARG LEU LEU THR MET GLU ILE SEQRES 8 A 221 ASN PRO ASP CYS ALA ALA ILE THR GLN GLN MET LEU ASN SEQRES 9 A 221 PHE ALA GLY LEU GLN ASP LYS VAL THR ILE LEU ASN GLY SEQRES 10 A 221 ALA SER GLN ASP LEU ILE PRO GLN LEU LYS LYS LYS TYR SEQRES 11 A 221 ASP VAL ASP THR LEU ASP MET VAL PHE LEU ASP HIS TRP SEQRES 12 A 221 LYS ASP ARG TYR LEU PRO ASP THR LEU LEU LEU GLU LYS SEQRES 13 A 221 CYS GLY LEU LEU ARG LYS GLY THR VAL LEU LEU ALA ASP SEQRES 14 A 221 ASN VAL ILE VAL PRO GLY THR PRO ASP PHE LEU ALA TYR SEQRES 15 A 221 VAL ARG GLY SER SER SER PHE GLU CYS THR HIS TYR SER SEQRES 16 A 221 SER TYR LEU GLU TYR MET LYS VAL VAL ASP GLY LEU GLU SEQRES 17 A 221 LYS ALA ILE TYR GLN GLY PRO SER SER PRO ASP LYS SER SEQRES 1 B 221 MET GLY ASP THR LYS GLU GLN ARG ILE LEU ARG TYR VAL SEQRES 2 B 221 GLN GLN ASN ALA LYS PRO GLY ASP PRO GLN SER VAL LEU SEQRES 3 B 221 GLU ALA ILE ASP THR TYR CYS THR GLN LYS GLU TRP ALA SEQRES 4 B 221 MET ASN VAL GLY ASP ALA LYS GLY GLN ILE MET ASP ALA SEQRES 5 B 221 VAL ILE ARG GLU TYR SER PRO SER LEU VAL LEU GLU LEU SEQRES 6 B 221 GLY ALA TYR CYS GLY TYR SER ALA VAL ARG MET ALA ARG SEQRES 7 B 221 LEU LEU GLN PRO GLY ALA ARG LEU LEU THR MET GLU ILE SEQRES 8 B 221 ASN PRO ASP CYS ALA ALA ILE THR GLN GLN MET LEU ASN SEQRES 9 B 221 PHE ALA GLY LEU GLN ASP LYS VAL THR ILE LEU ASN GLY SEQRES 10 B 221 ALA SER GLN ASP LEU ILE PRO GLN LEU LYS LYS LYS TYR SEQRES 11 B 221 ASP VAL ASP THR LEU ASP MET VAL PHE LEU ASP HIS TRP SEQRES 12 B 221 LYS ASP ARG TYR LEU PRO ASP THR LEU LEU LEU GLU LYS SEQRES 13 B 221 CYS GLY LEU LEU ARG LYS GLY THR VAL LEU LEU ALA ASP SEQRES 14 B 221 ASN VAL ILE VAL PRO GLY THR PRO ASP PHE LEU ALA TYR SEQRES 15 B 221 VAL ARG GLY SER SER SER PHE GLU CYS THR HIS TYR SER SEQRES 16 B 221 SER TYR LEU GLU TYR MET LYS VAL VAL ASP GLY LEU GLU SEQRES 17 B 221 LYS ALA ILE TYR GLN GLY PRO SER SER PRO ASP LYS SER HET 2X1 A 301 21 HET ACT A 302 4 HET NA A 303 1 HET SO4 A 304 5 HET SO4 A 305 5 HET NA B 301 1 HET 2X1 B 302 21 HET ACT B 303 4 HET CL B 304 1 HET SO4 B 305 5 HET SO4 B 306 5 HETNAM 2X1 4-({[3-(AMINOMETHYL)PHENYL]CARBAMOYL}AMINO) HETNAM 2 2X1 BENZENECARBOXIMIDAMIDE HETNAM ACT ACETATE ION HETNAM NA SODIUM ION HETNAM SO4 SULFATE ION HETNAM CL CHLORIDE ION FORMUL 3 2X1 2(C15 H17 N5 O) FORMUL 4 ACT 2(C2 H3 O2 1-) FORMUL 5 NA 2(NA 1+) FORMUL 6 SO4 4(O4 S 2-) FORMUL 11 CL CL 1- FORMUL 14 HOH *207(H2 O) HELIX 1 1 THR A 47 ALA A 60 1 14 HELIX 2 2 ASP A 64 LYS A 79 1 16 HELIX 3 3 ASN A 84 LYS A 89 1 6 HELIX 4 4 LYS A 89 SER A 101 1 13 HELIX 5 5 GLY A 113 ARG A 121 1 9 HELIX 6 6 ASN A 135 GLY A 150 1 16 HELIX 7 7 LEU A 151 ASP A 153 5 3 HELIX 8 8 ALA A 161 ILE A 166 1 6 HELIX 9 9 GLN A 168 ASP A 174 1 7 HELIX 10 10 TRP A 186 ASP A 188 5 3 HELIX 11 11 ARG A 189 CYS A 200 1 12 HELIX 12 12 THR A 219 SER A 229 1 11 HELIX 13 13 THR B 47 ALA B 60 1 14 HELIX 14 14 ASP B 64 GLU B 80 1 17 HELIX 15 15 ASN B 84 LYS B 89 1 6 HELIX 16 16 LYS B 89 SER B 101 1 13 HELIX 17 17 GLY B 113 ARG B 121 1 9 HELIX 18 18 ASN B 135 GLY B 150 1 16 HELIX 19 19 LEU B 151 ASP B 153 5 3 HELIX 20 20 ALA B 161 ILE B 166 1 6 HELIX 21 21 GLN B 168 ASP B 174 1 7 HELIX 22 22 TRP B 186 ASP B 188 5 3 HELIX 23 23 ARG B 189 CYS B 200 1 12 HELIX 24 24 THR B 219 SER B 229 1 11 SHEET 1 A14 VAL A 155 ASN A 159 0 SHEET 2 A14 ARG A 128 GLU A 133 1 N THR A 131 O LEU A 158 SHEET 3 A14 LEU A 104 LEU A 108 1 N GLU A 107 O LEU A 130 SHEET 4 A14 LEU A 178 LEU A 183 1 O PHE A 182 N LEU A 106 SHEET 5 A14 LEU A 203 ASP A 212 1 O LEU A 210 N LEU A 183 SHEET 6 A14 ASP A 248 TYR A 255 -1 O TYR A 255 N GLY A 206 SHEET 7 A14 PHE A 232 LEU A 241 -1 N GLU A 233 O ILE A 254 SHEET 8 A14 PHE B 232 LEU B 241 -1 O HIS B 236 N SER A 238 SHEET 9 A14 ASP B 248 TYR B 255 -1 O LEU B 250 N TYR B 237 SHEET 10 A14 LEU B 203 ASP B 212 -1 N GLY B 206 O TYR B 255 SHEET 11 A14 LEU B 178 LEU B 183 1 N VAL B 181 O VAL B 208 SHEET 12 A14 LEU B 104 LEU B 108 1 N LEU B 106 O PHE B 182 SHEET 13 A14 ARG B 128 GLU B 133 1 O LEU B 130 N GLU B 107 SHEET 14 A14 VAL B 155 ASN B 159 1 O THR B 156 N THR B 131 LINK O VAL A 226 NA NA A 303 1555 1555 2.46 LINK O ARG A 227 NA NA A 303 1555 1555 2.51 LINK O SER A 229 NA NA A 303 1555 1555 2.28 LINK O PHE A 232 NA NA A 303 1555 1555 2.46 LINK O GLU A 242 NA NA B 301 1555 1555 2.60 LINK NA NA A 303 O GLU B 242 1555 1555 2.49 LINK NA NA A 303 O HOH B 401 1555 1555 2.45 LINK O HOH A 489 NA NA B 301 1555 1555 2.40 LINK O VAL B 226 NA NA B 301 1555 1555 2.43 LINK O ARG B 227 NA NA B 301 1555 1555 2.44 LINK O SER B 229 NA NA B 301 1555 1555 2.32 LINK O PHE B 232 NA NA B 301 1555 1555 2.42 CISPEP 1 VAL A 216 PRO A 217 0 8.56 CISPEP 2 VAL B 216 PRO B 217 0 2.01 SITE 1 AC1 5 ILE A 134 ASN A 135 PRO A 136 TRP A 186 SITE 2 AC1 5 ASP A 188 SITE 1 AC2 8 LEU A 108 GLY A 109 SER A 162 ASP A 184 SITE 2 AC2 8 TRP A 186 ARG A 189 ASP A 193 HOH A 440 SITE 1 AC3 6 VAL A 226 ARG A 227 SER A 229 PHE A 232 SITE 2 AC3 6 GLU B 242 HOH B 401 SITE 1 AC4 8 ALA A 110 TYR A 111 CYS A 112 GLY A 113 SITE 2 AC4 8 TYR A 114 SER A 115 ASP A 184 HOH A 402 SITE 1 AC5 3 ARG A 51 TYR A 75 LYS A 79 SITE 1 AC6 6 GLU A 242 HOH A 489 VAL B 226 ARG B 227 SITE 2 AC6 6 SER B 229 PHE B 232 SITE 1 AC7 6 ILE B 134 ASN B 135 PRO B 136 TRP B 186 SITE 2 AC7 6 ASP B 188 ARG B 189 SITE 1 AC8 8 LEU B 108 GLY B 109 SER B 162 ASP B 184 SITE 2 AC8 8 TRP B 186 ARG B 189 ASP B 193 HOH B 468 SITE 1 AC9 2 GLY B 86 ARG B 118 SITE 1 BC1 7 TYR B 111 CYS B 112 GLY B 113 TYR B 114 SITE 2 BC1 7 SER B 115 ASP B 184 HOH B 427 SITE 1 BC2 4 ARG B 51 TYR B 75 LYS B 79 HOH B 466 CRYST1 125.366 125.366 77.287 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007977 0.004605 0.000000 0.00000 SCALE2 0.000000 0.009211 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012939 0.00000