HEADER TRANSPORT PROTEIN 27-MAR-14 4PYR TITLE STRUCTURE OF A PUTATIVE BRANCHED-CHAIN AMINO ACID ABC TRANSPORTER FROM TITLE 2 CHROMOBACTERIUM VIOLACEUM ATCC 12472 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE BRANCHED-CHAIN AMINO ACID ABC TRANSPORTER; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 83-387; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHROMOBACTERIUM VIOLACEUM; SOURCE 3 ORGANISM_TAXID: 243365; SOURCE 4 STRAIN: ATCC 12472; SOURCE 5 GENE: CV_0653; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL-21 MAGIC; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS, MCSG, AMINO ACID TRANSPORTER, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.V.FILIPPOVA,G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,M.ENDRES, AUTHOR 2 A.JOACHIMIAK,W.F.ANDERSON,MIDWEST CENTER FOR STRUCTURAL GENOMICS AUTHOR 3 (MCSG) REVDAT 4 24-JAN-18 4PYR 1 JRNL REVDAT 3 22-NOV-17 4PYR 1 REMARK REVDAT 2 13-AUG-14 4PYR 1 AUTHOR JRNL REVDAT 1 23-APR-14 4PYR 0 JRNL AUTH E.V.FILIPPOVA,G.MINASOV,L.SHUVALOVA,O.KIRYUKHINA,M.ENDRES, JRNL AUTH 2 A.JOACHIMIAK,W.F.ANDERSON, JRNL AUTH 3 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) JRNL TITL STRUCTURE OF A PUTATIVE BRANCHED-CHAIN AMINO ACID ABC JRNL TITL 2 TRANSPORTER FROM CHROMOBACTERIUM VIOLACEUM ATCC 12472 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 44047 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.188 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.233 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2347 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3130 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2660 REMARK 3 BIN FREE R VALUE SET COUNT : 181 REMARK 3 BIN FREE R VALUE : 0.3010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2200 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 20 REMARK 3 SOLVENT ATOMS : 220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.20 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.24000 REMARK 3 B22 (A**2) : 2.93000 REMARK 3 B33 (A**2) : -0.60000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.49000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.092 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.082 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.071 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.926 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.965 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.946 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2339 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2307 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3189 ; 1.723 ; 2.001 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5278 ; 0.842 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 315 ; 6.151 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 95 ;32.785 ;22.947 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 349 ;14.198 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 26 ;14.079 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 366 ; 0.097 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2752 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 518 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1239 ; 2.484 ; 1.062 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1237 ; 2.476 ; 7.946 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1561 ; 2.829 ; 1.608 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1562 ; 2.828 ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1100 ; 3.215 ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1099 ; 3.203 ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1628 ; 3.573 ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2776 ; 3.669 ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2700 ; 3.531 ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2316 ;36.350 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2274 ; 9.567 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 83 A 118 REMARK 3 ORIGIN FOR THE GROUP (A): 39.6103 21.9284 -1.8245 REMARK 3 T TENSOR REMARK 3 T11: 0.0839 T22: 0.0085 REMARK 3 T33: 0.0900 T12: 0.0050 REMARK 3 T13: -0.0022 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 4.4636 L22: 1.8433 REMARK 3 L33: 4.8221 L12: 0.5389 REMARK 3 L13: 1.2201 L23: 0.2282 REMARK 3 S TENSOR REMARK 3 S11: 0.0232 S12: 0.0669 S13: 0.0143 REMARK 3 S21: -0.0839 S22: 0.0063 S23: -0.2795 REMARK 3 S31: 0.0738 S32: 0.2003 S33: -0.0295 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 119 A 169 REMARK 3 ORIGIN FOR THE GROUP (A): 44.6207 31.0409 4.0525 REMARK 3 T TENSOR REMARK 3 T11: 0.1347 T22: 0.1056 REMARK 3 T33: 0.2112 T12: -0.0026 REMARK 3 T13: -0.0346 T23: -0.0772 REMARK 3 L TENSOR REMARK 3 L11: 6.0050 L22: 2.5327 REMARK 3 L33: 3.4825 L12: -0.1089 REMARK 3 L13: -0.1635 L23: -0.1737 REMARK 3 S TENSOR REMARK 3 S11: -0.0561 S12: -0.3955 S13: 0.5967 REMARK 3 S21: 0.0522 S22: 0.1108 S23: -0.3893 REMARK 3 S31: -0.1651 S32: 0.5043 S33: -0.0547 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 170 A 186 REMARK 3 ORIGIN FOR THE GROUP (A): 35.9236 34.0638 11.8232 REMARK 3 T TENSOR REMARK 3 T11: 0.2509 T22: 0.2802 REMARK 3 T33: 0.2695 T12: 0.0222 REMARK 3 T13: 0.0087 T23: -0.1782 REMARK 3 L TENSOR REMARK 3 L11: 6.6146 L22: 9.0678 REMARK 3 L33: 2.6196 L12: 5.4679 REMARK 3 L13: 0.2386 L23: -1.0023 REMARK 3 S TENSOR REMARK 3 S11: 0.4107 S12: -1.0476 S13: 0.5222 REMARK 3 S21: 0.8426 S22: -0.3265 S23: -0.2873 REMARK 3 S31: -0.2201 S32: 0.1098 S33: -0.0842 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 187 A 302 REMARK 3 ORIGIN FOR THE GROUP (A): 16.8866 14.4877 23.6677 REMARK 3 T TENSOR REMARK 3 T11: 0.1522 T22: 0.0060 REMARK 3 T33: 0.0645 T12: -0.0001 REMARK 3 T13: 0.0002 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 2.9566 L22: 3.3838 REMARK 3 L33: 3.0221 L12: -0.0036 REMARK 3 L13: 0.5247 L23: -0.3286 REMARK 3 S TENSOR REMARK 3 S11: -0.0782 S12: -0.0562 S13: -0.1614 REMARK 3 S21: 0.1721 S22: -0.0181 S23: 0.1184 REMARK 3 S31: 0.0980 S32: -0.1180 S33: 0.0963 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 303 A 348 REMARK 3 ORIGIN FOR THE GROUP (A): 27.2626 18.0446 0.2999 REMARK 3 T TENSOR REMARK 3 T11: 0.1193 T22: 0.0626 REMARK 3 T33: 0.0470 T12: 0.0169 REMARK 3 T13: -0.0024 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 3.4507 L22: 1.8198 REMARK 3 L33: 2.8679 L12: 1.2148 REMARK 3 L13: -0.7928 L23: 0.1156 REMARK 3 S TENSOR REMARK 3 S11: -0.0715 S12: -0.0337 S13: -0.1996 REMARK 3 S21: 0.1632 S22: 0.0101 S23: 0.0632 REMARK 3 S31: 0.1573 S32: -0.2633 S33: 0.0613 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 349 A 381 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7750 29.1959 5.9796 REMARK 3 T TENSOR REMARK 3 T11: 0.1850 T22: 0.0696 REMARK 3 T33: 0.1271 T12: 0.0544 REMARK 3 T13: -0.0276 T23: 0.0037 REMARK 3 L TENSOR REMARK 3 L11: 4.1837 L22: 3.9969 REMARK 3 L33: 1.9044 L12: 1.8488 REMARK 3 L13: -1.2040 L23: 0.8054 REMARK 3 S TENSOR REMARK 3 S11: 0.1458 S12: -0.0483 S13: 0.6087 REMARK 3 S21: 0.1811 S22: 0.0160 S23: 0.0501 REMARK 3 S31: -0.3075 S32: -0.0384 S33: -0.1619 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4PYR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000085387. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 46422 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 34.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.52000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 25% PEG3350, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.16600 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 382 REMARK 465 GLY A 383 REMARK 465 ASN A 384 REMARK 465 ALA A 385 REMARK 465 LEU A 386 REMARK 465 GLN A 387 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 151 NE CZ NH1 NH2 REMARK 470 ARG A 368 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MSE A 381 CA - CB - CG ANGL. DEV. = -12.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 178 117.10 -164.83 REMARK 500 ASP A 245 84.81 -159.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GSH A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC110371 RELATED DB: TARGETTRACK DBREF 4PYR A 83 387 UNP Q7P0B4 Q7P0B4_CHRVO 83 387 SEQRES 1 A 305 LYS VAL ARG ILE GLY VAL ILE LEU PRO ALA GLU SER SER SEQRES 2 A 305 ALA LEU GLY GLU ALA ALA ALA VAL VAL ARG SER GLY VAL SEQRES 3 A 305 GLU ALA ALA ALA GLN VAL ASP GLN SER ALA GLU LEU TYR SEQRES 4 A 305 SER VAL ASP ALA THR GLY ASP ASN VAL VAL GLU ARG TYR SEQRES 5 A 305 ARG ALA ALA VAL ALA ASP GLY VAL ASN VAL VAL ILE GLY SEQRES 6 A 305 PRO LEU SER ARG ASP SER ILE VAL LYS LEU ALA PRO SER SEQRES 7 A 305 VAL THR VAL PRO THR LEU ALA LEU ASN SER VAL GLY ARG SEQRES 8 A 305 GLU ALA ALA ALA ASN PRO LYS LEU TYR SER LEU SER LEU SEQRES 9 A 305 ILE VAL GLU GLY GLU ALA ARG GLN LEU ALA ARG LEU MSE SEQRES 10 A 305 ARG ASP ASP SER ARG ALA ALA PRO LEU LEU VAL VAL GLY SEQRES 11 A 305 GLY ASP ALA LEU SER GLN ARG LEU GLY LYS ALA PHE ALA SEQRES 12 A 305 ASP GLU TRP ARG ALA ALA ALA GLY LYS PRO VAL ARG GLN SEQRES 13 A 305 MSE ALA PHE ASP ALA ASN ASP MSE ALA PRO LEU LEU GLN SEQRES 14 A 305 ALA ALA GLY GLN ALA ASP ALA VAL ALA LEU ALA LEU ASP SEQRES 15 A 305 VAL ALA GLN ALA ALA ARG LEU LYS SER ALA LEU THR PRO SEQRES 16 A 305 ASP VAL PRO VAL TYR GLY THR SER GLN LEU ASN VAL GLY SEQRES 17 A 305 GLY MSE GLN PRO GLU LEU ALA GLY VAL ARG PHE ILE ASP SEQRES 18 A 305 MSE PRO TRP PHE LEU MSE PRO ALA HIS PRO ALA VAL GLN SEQRES 19 A 305 ARG TYR PRO ARG PRO ALA ALA PRO LEU THR ARG GLN THR SEQRES 20 A 305 GLU ARG LEU TYR ALA LEU GLY ILE ASP ALA TYR ARG LEU SEQRES 21 A 305 ALA VAL GLN LEU ALA GLY SER ARG SER GLY ALA ALA VAL SEQRES 22 A 305 ARG LEU ASP GLY VAL THR GLY ASP LEU LYS LEU GLY ARG SEQRES 23 A 305 ASP ARG ALA PHE GLU ARG GLN LEU PRO ALA GLY VAL MSE SEQRES 24 A 305 GLY GLY ASN ALA LEU GLN MODRES 4PYR MSE A 199 MET SELENOMETHIONINE MODRES 4PYR MSE A 239 MET SELENOMETHIONINE MODRES 4PYR MSE A 246 MET SELENOMETHIONINE MODRES 4PYR MSE A 292 MET SELENOMETHIONINE MODRES 4PYR MSE A 304 MET SELENOMETHIONINE MODRES 4PYR MSE A 309 MET SELENOMETHIONINE MODRES 4PYR MSE A 381 MET SELENOMETHIONINE HET MSE A 199 8 HET MSE A 239 16 HET MSE A 246 8 HET MSE A 292 8 HET MSE A 304 8 HET MSE A 309 8 HET MSE A 381 16 HET GSH A 401 20 HETNAM MSE SELENOMETHIONINE HETNAM GSH GLUTATHIONE FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 GSH C10 H17 N3 O6 S FORMUL 3 HOH *220(H2 O) HELIX 1 1 LEU A 97 GLN A 116 1 20 HELIX 2 2 THR A 126 ASP A 128 5 3 HELIX 3 3 ASN A 129 ASP A 140 1 12 HELIX 4 4 SER A 150 ALA A 158 1 9 HELIX 5 5 PRO A 159 VAL A 161 5 3 HELIX 6 6 ILE A 187 ASP A 202 1 16 HELIX 7 7 ASP A 214 GLY A 233 1 20 HELIX 8 8 MSE A 246 GLN A 255 1 10 HELIX 9 9 ASP A 264 LEU A 275 1 12 HELIX 10 10 SER A 285 ASN A 288 5 4 HELIX 11 11 GLN A 293 ALA A 297 5 5 HELIX 12 12 MSE A 304 MSE A 309 1 6 HELIX 13 13 HIS A 312 TYR A 318 1 7 HELIX 14 14 THR A 326 GLY A 348 1 23 HELIX 15 15 SER A 351 ALA A 354 5 4 HELIX 16 16 ARG A 368 ARG A 370 5 3 SHEET 1 A 5 ALA A 118 ASP A 124 0 SHEET 2 A 5 VAL A 84 LEU A 90 1 N VAL A 88 O TYR A 121 SHEET 3 A 5 VAL A 144 ILE A 146 1 O VAL A 144 N GLY A 87 SHEET 4 A 5 THR A 165 ALA A 167 1 O LEU A 166 N VAL A 145 SHEET 5 A 5 LEU A 181 SER A 183 1 O TYR A 182 N THR A 165 SHEET 1 B 6 ARG A 237 ALA A 240 0 SHEET 2 B 6 PRO A 207 VAL A 211 1 N LEU A 209 O ARG A 237 SHEET 3 B 6 ALA A 258 ALA A 262 1 O ALA A 260 N VAL A 210 SHEET 4 B 6 VAL A 281 GLY A 283 1 O TYR A 282 N LEU A 261 SHEET 5 B 6 ARG A 300 ILE A 302 1 O ARG A 300 N VAL A 281 SHEET 6 B 6 ALA A 378 VAL A 380 -1 O GLY A 379 N PHE A 301 SHEET 1 C 3 ARG A 356 GLY A 359 0 SHEET 2 C 3 GLY A 362 LEU A 366 -1 O LEU A 364 N LEU A 357 SHEET 3 C 3 PHE A 372 GLN A 375 -1 O GLU A 373 N LYS A 365 LINK C LEU A 198 N MSE A 199 1555 1555 1.33 LINK C MSE A 199 N AARG A 200 1555 1555 1.33 LINK C MSE A 199 N BARG A 200 1555 1555 1.33 LINK C GLN A 238 N AMSE A 239 1555 1555 1.33 LINK C GLN A 238 N BMSE A 239 1555 1555 1.33 LINK C AMSE A 239 N ALA A 240 1555 1555 1.33 LINK C BMSE A 239 N ALA A 240 1555 1555 1.33 LINK C ASP A 245 N MSE A 246 1555 1555 1.33 LINK C MSE A 246 N ALA A 247 1555 1555 1.33 LINK C GLY A 291 N MSE A 292 1555 1555 1.34 LINK C MSE A 292 N GLN A 293 1555 1555 1.34 LINK C ASP A 303 N MSE A 304 1555 1555 1.31 LINK C MSE A 304 N PRO A 305 1555 1555 1.34 LINK C LEU A 308 N MSE A 309 1555 1555 1.34 LINK C MSE A 309 N PRO A 310 1555 1555 1.36 LINK C VAL A 380 N AMSE A 381 1555 1555 1.33 LINK C VAL A 380 N BMSE A 381 1555 1555 1.33 CISPEP 1 GLY A 147 PRO A 148 0 1.89 SITE 1 AC1 13 LEU A 168 ASN A 169 SER A 170 SER A 185 SITE 2 AC1 13 LEU A 186 ILE A 187 ARG A 219 LEU A 335 SITE 3 AC1 13 HOH A 575 HOH A 589 HOH A 686 HOH A 690 SITE 4 AC1 13 HOH A 709 CRYST1 41.182 72.332 45.146 90.00 95.13 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024282 0.000000 0.002180 0.00000 SCALE2 0.000000 0.013825 0.000000 0.00000 SCALE3 0.000000 0.000000 0.022239 0.00000