HEADER HYDROLASE 31-MAR-14 4Q01 TITLE SECOND-SITE SCREENING OF K-RAS IN THE PRESENCE OF COVALENTLY ATTACHED TITLE 2 FIRST-SITE LIGANDS COMPND MOL_ID: 1; COMPND 2 MOLECULE: K-RAS; COMPND 3 CHAIN: A, B; COMPND 4 EC: 3.6.5.2; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SMALL GTPASE, SIGNALING TRANSDUCTION, SOS, RAF, CYTOSOL, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR Q.SUN,J.PHAN,A.FRIBERG,D.V.CAMPER,E.T.OLEJNICZAK,S.W.FESIK REVDAT 1 10-SEP-14 4Q01 0 JRNL AUTH Q.SUN,J.PHAN,A.R.FRIBERG,D.V.CAMPER,E.T.OLEJNICZAK,S.W.FESIK JRNL TITL A METHOD FOR THE SECOND-SITE SCREENING OF K-RAS IN THE JRNL TITL 2 PRESENCE OF A COVALENTLY ATTACHED FIRST-SITE LIGAND. JRNL REF J.BIOMOL.NMR V. 60 11 2014 JRNL REFN ISSN 0925-2738 JRNL PMID 25087006 JRNL DOI 10.1007/S10858-014-9849-8 REMARK 2 REMARK 2 RESOLUTION. 1.29 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE- REMARK 3 : KUNSTLEVE,LI-WEI HUNG,ROBERT IMMORMINO, REMARK 3 : TOM IOERGER,AIRLIE MCCOY,ERIK MCKEE,NIGEL REMARK 3 : MORIARTY,REETAL PAI,RANDY READ,JANE REMARK 3 : RICHARDSON,DAVID RICHARDSON,TOD ROMO,JIM REMARK 3 : SACCHETTINI,NICHOLAS SAUTER,JACOB SMITH, REMARK 3 : LAURENT STORONI,TOM TERWILLIGER,PETER REMARK 3 : ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.29 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 25.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 3 NUMBER OF REFLECTIONS : 79519 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 3980 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 25.0152 - 3.9144 0.92 2723 153 0.1669 0.1951 REMARK 3 2 3.9144 - 3.1088 0.88 2363 114 0.1646 0.1736 REMARK 3 3 3.1088 - 2.7164 1.00 2829 133 0.1784 0.1934 REMARK 3 4 2.7164 - 2.4683 1.00 2766 169 0.1774 0.1869 REMARK 3 5 2.4683 - 2.2915 1.00 2781 158 0.1756 0.2071 REMARK 3 6 2.2915 - 2.1565 0.99 2761 142 0.1799 0.2034 REMARK 3 7 2.1565 - 2.0485 1.00 2753 163 0.1812 0.2281 REMARK 3 8 2.0485 - 1.9594 1.00 2759 139 0.1854 0.2087 REMARK 3 9 1.9594 - 1.8840 0.99 2709 148 0.1923 0.2156 REMARK 3 10 1.8840 - 1.8190 1.00 2725 134 0.1978 0.2383 REMARK 3 11 1.8190 - 1.7621 1.00 2773 150 0.1930 0.2133 REMARK 3 12 1.7621 - 1.7118 1.00 2744 141 0.1921 0.2300 REMARK 3 13 1.7118 - 1.6667 1.00 2742 146 0.1880 0.2484 REMARK 3 14 1.6667 - 1.6261 1.00 2714 153 0.2005 0.2319 REMARK 3 15 1.6261 - 1.5891 1.00 2727 131 0.2014 0.2294 REMARK 3 16 1.5891 - 1.5553 0.99 2715 155 0.2008 0.2459 REMARK 3 17 1.5553 - 1.5242 1.00 2702 133 0.2090 0.2265 REMARK 3 18 1.5242 - 1.4954 0.99 2707 139 0.2142 0.2474 REMARK 3 19 1.4954 - 1.4687 1.00 2743 145 0.2221 0.2609 REMARK 3 20 1.4687 - 1.4438 0.99 2672 137 0.2238 0.2158 REMARK 3 21 1.4438 - 1.4205 1.00 2730 136 0.2307 0.2689 REMARK 3 22 1.4205 - 1.3987 0.99 2696 146 0.2403 0.2812 REMARK 3 23 1.3987 - 1.3781 0.98 2710 140 0.2406 0.2821 REMARK 3 24 1.3781 - 1.3587 0.99 2651 133 0.2567 0.3031 REMARK 3 25 1.3587 - 1.3404 0.97 2603 155 0.2573 0.2806 REMARK 3 26 1.3404 - 1.3229 0.96 2668 141 0.2669 0.2910 REMARK 3 27 1.3229 - 1.3064 0.96 2601 121 0.2937 0.3087 REMARK 3 28 1.3064 - 1.2907 0.92 2472 125 0.2749 0.3021 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.012 2807 REMARK 3 ANGLE : 1.468 3802 REMARK 3 CHIRALITY : 0.078 423 REMARK 3 PLANARITY : 0.007 482 REMARK 3 DIHEDRAL : 15.578 1051 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Q01 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-APR-14. REMARK 100 THE RCSB ID CODE IS RCSB085433. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : BRUKER PLATINUM 135 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 79519 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.290 REMARK 200 RESOLUTION RANGE LOW (A) : 25.010 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.29 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% PEG 4000, 0.1 M SODIUM ACETATE, PH REMARK 280 4.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.15700 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.41750 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.83550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.41750 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.15700 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.83550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 167 REMARK 465 GLU A 168 REMARK 465 LYS A 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS B 169 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 49 HH21 ARG A 164 1.37 REMARK 500 HH22 ARG A 123 OE2 GLU A 143 1.38 REMARK 500 HH11 ARG B 102 O HOH B 529 1.47 REMARK 500 HZ2 LYS A 5 O HOH A 436 1.49 REMARK 500 O HOH A 434 O HOH A 459 1.85 REMARK 500 OE2 GLU B 107 O HOH B 464 1.89 REMARK 500 O HOH A 439 O HOH A 455 1.93 REMARK 500 O HOH B 439 O HOH B 485 1.95 REMARK 500 O HOH B 462 O HOH B 501 1.96 REMARK 500 O HOH A 470 O HOH A 483 1.99 REMARK 500 OD1 ASP A 69 O HOH A 367 2.01 REMARK 500 O HOH B 443 O HOH B 476 2.03 REMARK 500 O HOH B 411 O HOH B 453 2.03 REMARK 500 O HOH A 443 O HOH A 475 2.06 REMARK 500 OE1 GLU A 49 NH2 ARG A 164 2.06 REMARK 500 O HOH B 484 O HOH B 503 2.08 REMARK 500 OD2 ASP A 132 O HOH A 407 2.12 REMARK 500 O HOH A 436 O HOH A 447 2.13 REMARK 500 ND1 HIS A 94 O HOH A 450 2.13 REMARK 500 O HOH B 477 O HOH B 484 2.15 REMARK 500 O HOH A 418 O HOH A 458 2.16 REMARK 500 O HOH B 463 O HOH B 475 2.18 REMARK 500 O HOH A 357 O HOH A 423 2.18 REMARK 500 O HOH A 445 O HOH B 491 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS A 51 CB CYS A 51 SG -0.162 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 117 34.56 72.87 REMARK 500 ARG A 149 -9.16 89.96 REMARK 500 ASP B 108 71.64 -117.60 REMARK 500 ARG B 149 -11.39 92.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 512 DISTANCE = 6.84 ANGSTROMS REMARK 525 HOH B 536 DISTANCE = 6.81 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GDP A 201 O1B REMARK 620 2 HOH A 303 O 170.6 REMARK 620 3 HOH A 302 O 95.0 93.9 REMARK 620 4 HOH A 304 O 89.5 87.7 88.7 REMARK 620 5 SER A 17 OG 92.0 91.9 83.8 172.4 REMARK 620 6 HOH A 301 O 85.8 85.5 176.0 95.2 92.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 303 O REMARK 620 2 HOH B 301 O 88.9 REMARK 620 3 HOH B 302 O 93.6 87.9 REMARK 620 4 SER B 17 OG 83.0 171.9 91.7 REMARK 620 5 HOH B 304 O 175.2 95.2 84.2 92.8 REMARK 620 6 GDP B 201 O2B 94.4 89.8 171.7 91.7 88.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2XH A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2XH B 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4PZY RELATED DB: PDB REMARK 900 RELATED ID: 4PZZ RELATED DB: PDB REMARK 900 RELATED ID: 4Q02 RELATED DB: PDB REMARK 900 RELATED ID: 4Q03 RELATED DB: PDB DBREF 4Q01 A 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 4Q01 B 1 169 UNP P01116 RASK_HUMAN 1 169 SEQADV 4Q01 VAL A 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQADV 4Q01 CYS A 39 UNP P01116 SER 39 ENGINEERED MUTATION SEQADV 4Q01 SER A 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQADV 4Q01 VAL B 12 UNP P01116 GLY 12 ENGINEERED MUTATION SEQADV 4Q01 CYS B 39 UNP P01116 SER 39 ENGINEERED MUTATION SEQADV 4Q01 SER B 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQRES 1 A 169 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA VAL GLY SEQRES 2 A 169 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 A 169 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP CYS SEQRES 4 A 169 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 A 169 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 A 169 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 A 169 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 A 169 ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 A 169 ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 A 169 SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN ALA SEQRES 11 A 169 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE GLU SEQRES 12 A 169 THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA PHE SEQRES 13 A 169 TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU LYS SEQRES 1 B 169 MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA VAL GLY SEQRES 2 B 169 VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN ASN SEQRES 3 B 169 HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP CYS SEQRES 4 B 169 TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR CYS LEU SEQRES 5 B 169 LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SER SEQRES 6 B 169 ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY PHE SEQRES 7 B 169 LEU CYS VAL PHE ALA ILE ASN ASN THR LYS SER PHE GLU SEQRES 8 B 169 ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL LYS SEQRES 9 B 169 ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN LYS SEQRES 10 B 169 SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN ALA SEQRES 11 B 169 GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE GLU SEQRES 12 B 169 THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA PHE SEQRES 13 B 169 TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU LYS HET GDP A 201 37 HET MG A 202 1 HET GDP B 201 37 HET 2XH A 203 11 HET MG B 202 1 HET 2XH B 203 11 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM 2XH NAPHTHALENE-1-THIOL FORMUL 3 GDP 2(C10 H15 N5 O11 P2) FORMUL 4 MG 2(MG 2+) FORMUL 6 2XH 2(C10 H8 S) FORMUL 9 HOH *434(H2 O) HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 ALA A 59 GLU A 63 5 5 HELIX 3 3 SER A 65 GLY A 75 1 11 HELIX 4 4 ASN A 86 LYS A 104 1 19 HELIX 5 5 ASP A 126 GLY A 138 1 13 HELIX 6 6 GLY A 151 HIS A 166 1 16 HELIX 7 7 GLY B 15 ASN B 26 1 12 HELIX 8 8 ALA B 59 GLU B 63 5 5 HELIX 9 9 SER B 65 GLY B 75 1 11 HELIX 10 10 ASN B 86 ASP B 92 1 7 HELIX 11 11 ASP B 92 ASP B 105 1 14 HELIX 12 12 ASP B 126 GLY B 138 1 13 HELIX 13 13 GLY B 151 LYS B 169 1 19 SHEET 1 A 6 ASP A 38 ILE A 46 0 SHEET 2 A 6 GLU A 49 ASP A 57 -1 O ILE A 55 N TYR A 40 SHEET 3 A 6 GLU A 3 VAL A 9 1 N LEU A 6 O LEU A 56 SHEET 4 A 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 A 6 MET A 111 ASN A 116 1 O ASN A 116 N PHE A 82 SHEET 6 A 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 B 6 ASP B 38 ILE B 46 0 SHEET 2 B 6 GLU B 49 ASP B 57 -1 O ILE B 55 N TYR B 40 SHEET 3 B 6 THR B 2 VAL B 9 1 N TYR B 4 O ASP B 54 SHEET 4 B 6 GLY B 77 ALA B 83 1 O VAL B 81 N VAL B 9 SHEET 5 B 6 MET B 111 ASN B 116 1 O ASN B 116 N PHE B 82 SHEET 6 B 6 PHE B 141 GLU B 143 1 O ILE B 142 N LEU B 113 LINK O1B GDP A 201 MG MG A 202 1555 1555 2.01 LINK MG MG A 202 O HOH A 303 1555 1555 2.04 LINK MG MG B 202 O HOH B 303 1555 1555 2.05 LINK MG MG B 202 O HOH B 301 1555 1555 2.05 LINK MG MG A 202 O HOH A 302 1555 1555 2.05 LINK MG MG B 202 O HOH B 302 1555 1555 2.06 LINK OG SER B 17 MG MG B 202 1555 1555 2.06 LINK MG MG A 202 O HOH A 304 1555 1555 2.08 LINK MG MG B 202 O HOH B 304 1555 1555 2.08 LINK OG SER A 17 MG MG A 202 1555 1555 2.09 LINK MG MG A 202 O HOH A 301 1555 1555 2.12 LINK O2B GDP B 201 MG MG B 202 1555 1555 2.01 LINK SG CYS A 39 SAH 2XH A 203 1555 1555 2.03 LINK SG CYS B 39 SAH 2XH B 203 1555 1555 2.05 SITE 1 AC1 24 GLY A 13 VAL A 14 GLY A 15 LYS A 16 SITE 2 AC1 24 SER A 17 ALA A 18 PHE A 28 ASP A 30 SITE 3 AC1 24 GLU A 31 ASN A 116 LYS A 117 ASP A 119 SITE 4 AC1 24 LEU A 120 SER A 145 ALA A 146 LYS A 147 SITE 5 AC1 24 MG A 202 HOH A 301 HOH A 302 HOH A 304 SITE 6 AC1 24 HOH A 307 HOH A 359 HOH A 372 HOH A 412 SITE 1 AC2 6 SER A 17 GDP A 201 HOH A 301 HOH A 302 SITE 2 AC2 6 HOH A 303 HOH A 304 SITE 1 AC3 26 GLY B 13 VAL B 14 GLY B 15 LYS B 16 SITE 2 AC3 26 SER B 17 ALA B 18 PHE B 28 VAL B 29 SITE 3 AC3 26 ASP B 30 ASN B 116 LYS B 117 ASP B 119 SITE 4 AC3 26 LEU B 120 SER B 145 ALA B 146 LYS B 147 SITE 5 AC3 26 MG B 202 HOH B 301 HOH B 303 HOH B 304 SITE 6 AC3 26 HOH B 306 HOH B 325 HOH B 336 HOH B 359 SITE 7 AC3 26 HOH B 374 HOH B 528 SITE 1 AC4 7 LEU A 6 CYS A 39 ASP A 54 ILE A 55 SITE 2 AC4 7 LEU A 56 TYR A 71 MET B 67 SITE 1 AC5 6 SER B 17 GDP B 201 HOH B 301 HOH B 302 SITE 2 AC5 6 HOH B 303 HOH B 304 SITE 1 AC6 6 LEU B 6 VAL B 7 CYS B 39 ILE B 55 SITE 2 AC6 6 LEU B 56 TYR B 71 CRYST1 36.314 83.671 104.835 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.027538 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011952 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009539 0.00000