data_4Q0U # _entry.id 4Q0U # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4Q0U pdb_00004q0u 10.2210/pdb4q0u/pdb RCSB RCSB085462 ? ? WWPDB D_1000085462 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4Q0P 'X-ray structure of wild-type enzyme complexed with L-ribose' unspecified PDB 4Q0Q 'X-ray structure of wild-type enzyme complexed with L-ribulose' unspecified PDB 4Q0S 'X-ray structure of wild-type enzyme complexed with ribitol' unspecified PDB 4Q0V 'X-ray structure of E204Q mutant complexed with L-ribulose' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4Q0U _pdbx_database_status.recvd_initial_deposition_date 2014-04-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yoshida, H.' 1 'Yoshihara, A.' 2 'Teraoka, M.' 3 'Izumori, K.' 4 'Kamitori, S.' 5 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'X-ray structure of a novel L-ribose isomerase acting on a non-natural sugar L-ribose as its ideal substrate.' 'Febs J.' 281 3150 3164 2014 ? UK 1742-464X ? ? 24846739 10.1111/febs.12850 1 ;Overexpression, crystallization and preliminary X-ray diffraction analysis of L-ribose isomerase from Acinetobacter sp. strain DL-28 ; 'Acta Crystallogr.,Sect.F' 67 1281 1284 2011 ? DK 1744-3091 ? ? 22102048 10.1107/S1744309111030351 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yoshida, H.' 1 ? primary 'Yoshihara, A.' 2 ? primary 'Teraoka, M.' 3 ? primary 'Terami, Y.' 4 ? primary 'Takata, G.' 5 ? primary 'Izumori, K.' 6 ? primary 'Kamitori, S.' 7 ? 1 'Yoshida, H.' 8 ? 1 'Teraoka, M.' 9 ? 1 'Yoshihara, A.' 10 ? 1 'Izumori, K.' 11 ? 1 'Kamitori, S.' 12 ? # _cell.entry_id 4Q0U _cell.length_a 96.730 _cell.length_b 107.060 _cell.length_c 118.890 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4Q0U _symmetry.space_group_name_H-M 'F 2 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 22 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'L-Ribose isomerase' 28750.270 1 5.3.1.- E204Q ? ? 2 non-polymer syn 'COBALT (II) ION' 58.933 1 ? ? ? ? 3 non-polymer man L-ribose 150.130 1 ? ? ? ? 4 non-polymer man alpha-L-ribofuranose 150.130 3 ? ? ? ? 5 non-polymer man beta-L-ribopyranose 150.130 1 ? ? ? ? 6 non-polymer syn 'COBALT HEXAMMINE(III)' 161.116 1 ? ? ? ? 7 water nat water 18.015 128 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRGSHHHHHHGSARTSITRREYDEWVREAAALGKALRYPITEKMVNDSAGIVFGADQYDAFKNGMWSGEPYEAMIIFESL NEPAVDGLPTGAAPYAEYSGLCDKLMIVHPGKFCPPHHHGRKTESYEVVLGEMEVFYSPTPSAESGVELLNFSGMPVGSP WPEGVALPKGRESSYEKLTSYVRLRAGDPKFVMHRKHLHAFRCPPDSDVPLVVRQVSTYSHEPTEAAAGNHAPIPSWLGM HDNDFVSDAANTGRLQTAIS ; _entity_poly.pdbx_seq_one_letter_code_can ;MRGSHHHHHHGSARTSITRREYDEWVREAAALGKALRYPITEKMVNDSAGIVFGADQYDAFKNGMWSGEPYEAMIIFESL NEPAVDGLPTGAAPYAEYSGLCDKLMIVHPGKFCPPHHHGRKTESYEVVLGEMEVFYSPTPSAESGVELLNFSGMPVGSP WPEGVALPKGRESSYEKLTSYVRLRAGDPKFVMHRKHLHAFRCPPDSDVPLVVRQVSTYSHEPTEAAAGNHAPIPSWLGM HDNDFVSDAANTGRLQTAIS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 GLY n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 GLY n 1 12 SER n 1 13 ALA n 1 14 ARG n 1 15 THR n 1 16 SER n 1 17 ILE n 1 18 THR n 1 19 ARG n 1 20 ARG n 1 21 GLU n 1 22 TYR n 1 23 ASP n 1 24 GLU n 1 25 TRP n 1 26 VAL n 1 27 ARG n 1 28 GLU n 1 29 ALA n 1 30 ALA n 1 31 ALA n 1 32 LEU n 1 33 GLY n 1 34 LYS n 1 35 ALA n 1 36 LEU n 1 37 ARG n 1 38 TYR n 1 39 PRO n 1 40 ILE n 1 41 THR n 1 42 GLU n 1 43 LYS n 1 44 MET n 1 45 VAL n 1 46 ASN n 1 47 ASP n 1 48 SER n 1 49 ALA n 1 50 GLY n 1 51 ILE n 1 52 VAL n 1 53 PHE n 1 54 GLY n 1 55 ALA n 1 56 ASP n 1 57 GLN n 1 58 TYR n 1 59 ASP n 1 60 ALA n 1 61 PHE n 1 62 LYS n 1 63 ASN n 1 64 GLY n 1 65 MET n 1 66 TRP n 1 67 SER n 1 68 GLY n 1 69 GLU n 1 70 PRO n 1 71 TYR n 1 72 GLU n 1 73 ALA n 1 74 MET n 1 75 ILE n 1 76 ILE n 1 77 PHE n 1 78 GLU n 1 79 SER n 1 80 LEU n 1 81 ASN n 1 82 GLU n 1 83 PRO n 1 84 ALA n 1 85 VAL n 1 86 ASP n 1 87 GLY n 1 88 LEU n 1 89 PRO n 1 90 THR n 1 91 GLY n 1 92 ALA n 1 93 ALA n 1 94 PRO n 1 95 TYR n 1 96 ALA n 1 97 GLU n 1 98 TYR n 1 99 SER n 1 100 GLY n 1 101 LEU n 1 102 CYS n 1 103 ASP n 1 104 LYS n 1 105 LEU n 1 106 MET n 1 107 ILE n 1 108 VAL n 1 109 HIS n 1 110 PRO n 1 111 GLY n 1 112 LYS n 1 113 PHE n 1 114 CYS n 1 115 PRO n 1 116 PRO n 1 117 HIS n 1 118 HIS n 1 119 HIS n 1 120 GLY n 1 121 ARG n 1 122 LYS n 1 123 THR n 1 124 GLU n 1 125 SER n 1 126 TYR n 1 127 GLU n 1 128 VAL n 1 129 VAL n 1 130 LEU n 1 131 GLY n 1 132 GLU n 1 133 MET n 1 134 GLU n 1 135 VAL n 1 136 PHE n 1 137 TYR n 1 138 SER n 1 139 PRO n 1 140 THR n 1 141 PRO n 1 142 SER n 1 143 ALA n 1 144 GLU n 1 145 SER n 1 146 GLY n 1 147 VAL n 1 148 GLU n 1 149 LEU n 1 150 LEU n 1 151 ASN n 1 152 PHE n 1 153 SER n 1 154 GLY n 1 155 MET n 1 156 PRO n 1 157 VAL n 1 158 GLY n 1 159 SER n 1 160 PRO n 1 161 TRP n 1 162 PRO n 1 163 GLU n 1 164 GLY n 1 165 VAL n 1 166 ALA n 1 167 LEU n 1 168 PRO n 1 169 LYS n 1 170 GLY n 1 171 ARG n 1 172 GLU n 1 173 SER n 1 174 SER n 1 175 TYR n 1 176 GLU n 1 177 LYS n 1 178 LEU n 1 179 THR n 1 180 SER n 1 181 TYR n 1 182 VAL n 1 183 ARG n 1 184 LEU n 1 185 ARG n 1 186 ALA n 1 187 GLY n 1 188 ASP n 1 189 PRO n 1 190 LYS n 1 191 PHE n 1 192 VAL n 1 193 MET n 1 194 HIS n 1 195 ARG n 1 196 LYS n 1 197 HIS n 1 198 LEU n 1 199 HIS n 1 200 ALA n 1 201 PHE n 1 202 ARG n 1 203 CYS n 1 204 PRO n 1 205 PRO n 1 206 ASP n 1 207 SER n 1 208 ASP n 1 209 VAL n 1 210 PRO n 1 211 LEU n 1 212 VAL n 1 213 VAL n 1 214 ARG n 1 215 GLN n 1 216 VAL n 1 217 SER n 1 218 THR n 1 219 TYR n 1 220 SER n 1 221 HIS n 1 222 GLU n 1 223 PRO n 1 224 THR n 1 225 GLU n 1 226 ALA n 1 227 ALA n 1 228 ALA n 1 229 GLY n 1 230 ASN n 1 231 HIS n 1 232 ALA n 1 233 PRO n 1 234 ILE n 1 235 PRO n 1 236 SER n 1 237 TRP n 1 238 LEU n 1 239 GLY n 1 240 MET n 1 241 HIS n 1 242 ASP n 1 243 ASN n 1 244 ASP n 1 245 PHE n 1 246 VAL n 1 247 SER n 1 248 ASP n 1 249 ALA n 1 250 ALA n 1 251 ASN n 1 252 THR n 1 253 GLY n 1 254 ARG n 1 255 LEU n 1 256 GLN n 1 257 THR n 1 258 ALA n 1 259 ILE n 1 260 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene L-RI _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain DL-28 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name Acinetobacter _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 160971 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain JM109 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQE30 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q93UQ5_9GAMM _struct_ref.pdbx_db_accession Q93UQ5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;RTSITRREYDEWVREAAALGKALRYPITEKMVNDSAGIVFGADQYDAFKNGMWSGEPYEAMIIFESLNEPAVDGLPTGAA PYAEYSGLCDKLMIVHPGKFCPPHHHGRKTESYEVVLGEMEVFYSPTPSAESGVELLNFSGMPVGSPWPEGVALPKGRES SYEKLTSYVRLRAGDPKFVMHRKHLHAFRCPPDSDVPLVVREVSTYSHEPTEAAAGNHAPIPSWLGMHDNDFVSDAANTG RLQTAIS ; _struct_ref.pdbx_align_begin 3 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4Q0U _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 14 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 260 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q93UQ5 _struct_ref_seq.db_align_beg 3 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 249 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 3 _struct_ref_seq.pdbx_auth_seq_align_end 249 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4Q0U MET A 1 ? UNP Q93UQ5 ? ? 'expression tag' -10 1 1 4Q0U ARG A 2 ? UNP Q93UQ5 ? ? 'expression tag' -9 2 1 4Q0U GLY A 3 ? UNP Q93UQ5 ? ? 'expression tag' -8 3 1 4Q0U SER A 4 ? UNP Q93UQ5 ? ? 'expression tag' -7 4 1 4Q0U HIS A 5 ? UNP Q93UQ5 ? ? 'expression tag' -6 5 1 4Q0U HIS A 6 ? UNP Q93UQ5 ? ? 'expression tag' -5 6 1 4Q0U HIS A 7 ? UNP Q93UQ5 ? ? 'expression tag' -4 7 1 4Q0U HIS A 8 ? UNP Q93UQ5 ? ? 'expression tag' -3 8 1 4Q0U HIS A 9 ? UNP Q93UQ5 ? ? 'expression tag' -2 9 1 4Q0U HIS A 10 ? UNP Q93UQ5 ? ? 'expression tag' -1 10 1 4Q0U GLY A 11 ? UNP Q93UQ5 ? ? 'expression tag' 0 11 1 4Q0U SER A 12 ? UNP Q93UQ5 ? ? 'expression tag' 1 12 1 4Q0U ALA A 13 ? UNP Q93UQ5 ? ? 'expression tag' 2 13 1 4Q0U GLN A 215 ? UNP Q93UQ5 GLU 204 'engineered mutation' 204 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 0MK 'L-saccharide, beta linking' . beta-L-ribopyranose 'beta-L-ribose; L-ribose; ribose; L-ribopyranose' 'C5 H10 O5' 150.130 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NCO non-polymer . 'COBALT HEXAMMINE(III)' ? 'Co H18 N6 3' 161.116 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 ROR L-saccharide . L-ribose ? 'C5 H10 O5' 150.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 Z6J 'L-saccharide, alpha linking' . alpha-L-ribofuranose 'alpha-L-ribose; L-ribose; ribose' 'C5 H10 O5' 150.130 # _exptl.entry_id 4Q0U _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.68 _exptl_crystal.density_percent_sol 54.04 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;10-16%(v/v) PEG400, 0.2M NaCl, 0.1M HEPES, 0.02M Hexaammine cobalt(III) chloride, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS VII' _diffrn_detector.pdbx_collection_date 2012-04-11 _diffrn_detector.details Mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4Q0U _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 61.5 _reflns.d_resolution_high 1.98 _reflns.number_obs 21464 _reflns.number_all 21464 _reflns.percent_possible_obs 99.1 _reflns.pdbx_Rmerge_I_obs 0.055 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 14.2 _reflns.B_iso_Wilson_estimate 25.8 _reflns.pdbx_redundancy 7.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.98 _reflns_shell.d_res_low 2.05 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.280 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.6 _reflns_shell.pdbx_redundancy 7.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2164 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4Q0U _refine.ls_number_reflns_obs 21458 _refine.ls_number_reflns_all 21458 _refine.pdbx_ls_sigma_I 0.0 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF 6490653.39 _refine.pdbx_data_cutoff_low_absF 0.000000 _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 61.45 _refine.ls_d_res_high 1.98 _refine.ls_percent_reflns_obs 98.9 _refine.ls_R_factor_obs 0.221 _refine.ls_R_factor_all 0.222 _refine.ls_R_factor_R_work 0.221 _refine.ls_R_factor_R_free 0.237 _refine.ls_R_factor_R_free_error 0.005 _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 2135 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 33.0 _refine.aniso_B[1][1] -0.91 _refine.aniso_B[2][2] -2.85 _refine.aniso_B[3][3] 3.75 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'FLAT MODEL' _refine.solvent_model_param_ksol 0.4 _refine.solvent_model_param_bsol 49.891 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'BULK SOLVENT MODEL USED' _refine.pdbx_starting_model 'PDB ENTRY 4Q0P' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model RESTRAINED _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4Q0U _refine_analyze.Luzzati_coordinate_error_obs 0.24 _refine_analyze.Luzzati_sigma_a_obs 0.17 _refine_analyze.Luzzati_d_res_low_obs 5.00 _refine_analyze.Luzzati_coordinate_error_free 0.28 _refine_analyze.Luzzati_sigma_a_free 0.23 _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1930 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 128 _refine_hist.number_atoms_total 2116 _refine_hist.d_res_high 1.98 _refine_hist.d_res_low 61.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id c_bond_d 0.006 ? ? ? ? 'X-RAY DIFFRACTION' c_angle_deg 1.4 ? ? ? ? 'X-RAY DIFFRACTION' c_dihedral_angle_d 25.4 ? ? ? ? 'X-RAY DIFFRACTION' c_improper_angle_d 0.84 ? ? ? ? 'X-RAY DIFFRACTION' c_mcbond_it 1.44 1.50 ? ? ? 'X-RAY DIFFRACTION' c_mcangle_it 2.33 2.00 ? ? ? 'X-RAY DIFFRACTION' c_scbond_it 1.92 2.00 ? ? ? 'X-RAY DIFFRACTION' c_scangle_it 2.73 2.50 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 1.98 _refine_ls_shell.d_res_low 2.05 _refine_ls_shell.number_reflns_R_work 1915 _refine_ls_shell.R_factor_R_work 0.280 _refine_ls_shell.percent_reflns_obs 100.0 _refine_ls_shell.R_factor_R_free 0.312 _refine_ls_shell.R_factor_R_free_error 0.020 _refine_ls_shell.percent_reflns_R_free 11.4 _refine_ls_shell.number_reflns_R_free 247 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1915 _refine_ls_shell.redundancy_reflns_obs ? # loop_ _pdbx_xplor_file.pdbx_refine_id _pdbx_xplor_file.serial_no _pdbx_xplor_file.param_file _pdbx_xplor_file.topol_file 'X-RAY DIFFRACTION' 1 protein_rep.param protein.top 'X-RAY DIFFRACTION' 2 dna-rna_rep.param dna-rna.top 'X-RAY DIFFRACTION' 3 water_rep.param water.top 'X-RAY DIFFRACTION' 4 ion.param ion.top 'X-RAY DIFFRACTION' 5 carbohydrate.param carbohydrate.top 'X-RAY DIFFRACTION' 6 ligand.param ligand.top # _struct.entry_id 4Q0U _struct.title 'Crystal structure of Acinetobacter sp. DL28 L-ribose isomerase mutant E204Q in complex with L-ribose' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4Q0U _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'Cupin barrel, Isomerase, Sugar binding' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 4 ? H N N 6 ? I N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 18 ? LEU A 36 ? THR A 7 LEU A 25 1 ? 19 HELX_P HELX_P2 2 GLY A 54 ? TYR A 58 ? GLY A 43 TYR A 47 5 ? 5 HELX_P HELX_P3 3 ASP A 59 ? GLY A 64 ? ASP A 48 GLY A 53 1 ? 6 HELX_P HELX_P4 4 PRO A 89 ? ALA A 93 ? PRO A 78 ALA A 82 5 ? 5 HELX_P HELX_P5 5 TYR A 95 ? SER A 99 ? TYR A 84 SER A 88 5 ? 5 HELX_P HELX_P6 6 ARG A 171 ? GLU A 176 ? ARG A 160 GLU A 165 5 ? 6 HELX_P HELX_P7 7 ILE A 234 ? LEU A 238 ? ILE A 223 LEU A 227 5 ? 5 HELX_P HELX_P8 8 SER A 247 ? LEU A 255 ? SER A 236 LEU A 244 5 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 117 NE2 ? ? ? 1_555 B CO . CO ? ? A HIS 106 A CO 501 1_555 ? ? ? ? ? ? ? 2.231 ? ? metalc2 metalc ? ? A HIS 119 NE2 ? ? ? 1_555 B CO . CO ? ? A HIS 108 A CO 501 1_555 ? ? ? ? ? ? ? 2.119 ? ? metalc3 metalc ? ? A GLU 124 OE2 ? ? ? 1_555 B CO . CO ? ? A GLU 113 A CO 501 1_555 ? ? ? ? ? ? ? 1.919 ? ? metalc4 metalc ? ? A HIS 199 NE2 ? ? ? 1_555 B CO . CO ? ? A HIS 188 A CO 501 1_555 ? ? ? ? ? ? ? 2.343 ? ? metalc5 metalc ? ? B CO . CO ? ? ? 1_555 C ROR . O2 ? ? A CO 501 A ROR 502 1_555 ? ? ? ? ? ? ? 2.219 ? ? metalc6 metalc ? ? B CO . CO ? ? ? 1_555 C ROR . O1 ? ? A CO 501 A ROR 502 1_555 ? ? ? ? ? ? ? 2.312 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 50 ? VAL A 52 ? GLY A 39 VAL A 41 A 2 ALA A 73 ? GLU A 82 ? ALA A 62 GLU A 71 A 3 LEU A 101 ? VAL A 108 ? LEU A 90 VAL A 97 A 4 LEU A 211 ? SER A 217 ? LEU A 200 SER A 206 A 5 GLU A 124 ? LEU A 130 ? GLU A 113 LEU A 119 A 6 PHE A 191 ? MET A 193 ? PHE A 180 MET A 182 B 1 SER A 180 ? ARG A 185 ? SER A 169 ARG A 174 B 2 GLU A 132 ? TYR A 137 ? GLU A 121 TYR A 126 B 3 HIS A 199 ? ARG A 202 ? HIS A 188 ARG A 191 B 4 PHE A 113 ? HIS A 118 ? PHE A 102 HIS A 107 B 5 ASP A 244 ? PHE A 245 ? ASP A 233 PHE A 234 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 51 ? N ILE A 40 O MET A 74 ? O MET A 63 A 2 3 N GLU A 82 ? N GLU A 71 O LEU A 101 ? O LEU A 90 A 3 4 N VAL A 108 ? N VAL A 97 O LEU A 211 ? O LEU A 200 A 4 5 O VAL A 212 ? O VAL A 201 N VAL A 129 ? N VAL A 118 A 5 6 N GLU A 124 ? N GLU A 113 O MET A 193 ? O MET A 182 B 1 2 O LEU A 184 ? O LEU A 173 N MET A 133 ? N MET A 122 B 2 3 N PHE A 136 ? N PHE A 125 O ALA A 200 ? O ALA A 189 B 3 4 O PHE A 201 ? O PHE A 190 N CYS A 114 ? N CYS A 103 B 4 5 N HIS A 118 ? N HIS A 107 O ASP A 244 ? O ASP A 233 # _database_PDB_matrix.entry_id 4Q0U _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4Q0U _atom_sites.fract_transf_matrix[1][1] 0.010338 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009341 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008411 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CO N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -10 ? ? ? A . n A 1 2 ARG 2 -9 ? ? ? A . n A 1 3 GLY 3 -8 ? ? ? A . n A 1 4 SER 4 -7 ? ? ? A . n A 1 5 HIS 5 -6 ? ? ? A . n A 1 6 HIS 6 -5 ? ? ? A . n A 1 7 HIS 7 -4 ? ? ? A . n A 1 8 HIS 8 -3 ? ? ? A . n A 1 9 HIS 9 -2 ? ? ? A . n A 1 10 HIS 10 -1 ? ? ? A . n A 1 11 GLY 11 0 ? ? ? A . n A 1 12 SER 12 1 1 SER SER A . n A 1 13 ALA 13 2 2 ALA ALA A . n A 1 14 ARG 14 3 3 ARG ARG A . n A 1 15 THR 15 4 4 THR THR A . n A 1 16 SER 16 5 5 SER SER A . n A 1 17 ILE 17 6 6 ILE ILE A . n A 1 18 THR 18 7 7 THR THR A . n A 1 19 ARG 19 8 8 ARG ARG A . n A 1 20 ARG 20 9 9 ARG ARG A . n A 1 21 GLU 21 10 10 GLU GLU A . n A 1 22 TYR 22 11 11 TYR TYR A . n A 1 23 ASP 23 12 12 ASP ASP A . n A 1 24 GLU 24 13 13 GLU GLU A . n A 1 25 TRP 25 14 14 TRP TRP A . n A 1 26 VAL 26 15 15 VAL VAL A . n A 1 27 ARG 27 16 16 ARG ARG A . n A 1 28 GLU 28 17 17 GLU GLU A . n A 1 29 ALA 29 18 18 ALA ALA A . n A 1 30 ALA 30 19 19 ALA ALA A . n A 1 31 ALA 31 20 20 ALA ALA A . n A 1 32 LEU 32 21 21 LEU LEU A . n A 1 33 GLY 33 22 22 GLY GLY A . n A 1 34 LYS 34 23 23 LYS LYS A . n A 1 35 ALA 35 24 24 ALA ALA A . n A 1 36 LEU 36 25 25 LEU LEU A . n A 1 37 ARG 37 26 26 ARG ARG A . n A 1 38 TYR 38 27 27 TYR TYR A . n A 1 39 PRO 39 28 28 PRO PRO A . n A 1 40 ILE 40 29 29 ILE ILE A . n A 1 41 THR 41 30 30 THR THR A . n A 1 42 GLU 42 31 31 GLU GLU A . n A 1 43 LYS 43 32 32 LYS LYS A . n A 1 44 MET 44 33 33 MET MET A . n A 1 45 VAL 45 34 34 VAL VAL A . n A 1 46 ASN 46 35 35 ASN ASN A . n A 1 47 ASP 47 36 36 ASP ASP A . n A 1 48 SER 48 37 37 SER SER A . n A 1 49 ALA 49 38 38 ALA ALA A . n A 1 50 GLY 50 39 39 GLY GLY A . n A 1 51 ILE 51 40 40 ILE ILE A . n A 1 52 VAL 52 41 41 VAL VAL A . n A 1 53 PHE 53 42 42 PHE PHE A . n A 1 54 GLY 54 43 43 GLY GLY A . n A 1 55 ALA 55 44 44 ALA ALA A . n A 1 56 ASP 56 45 45 ASP ASP A . n A 1 57 GLN 57 46 46 GLN GLN A . n A 1 58 TYR 58 47 47 TYR TYR A . n A 1 59 ASP 59 48 48 ASP ASP A . n A 1 60 ALA 60 49 49 ALA ALA A . n A 1 61 PHE 61 50 50 PHE PHE A . n A 1 62 LYS 62 51 51 LYS LYS A . n A 1 63 ASN 63 52 52 ASN ASN A . n A 1 64 GLY 64 53 53 GLY GLY A . n A 1 65 MET 65 54 54 MET MET A . n A 1 66 TRP 66 55 55 TRP TRP A . n A 1 67 SER 67 56 56 SER SER A . n A 1 68 GLY 68 57 57 GLY GLY A . n A 1 69 GLU 69 58 58 GLU GLU A . n A 1 70 PRO 70 59 59 PRO PRO A . n A 1 71 TYR 71 60 60 TYR TYR A . n A 1 72 GLU 72 61 61 GLU GLU A . n A 1 73 ALA 73 62 62 ALA ALA A . n A 1 74 MET 74 63 63 MET MET A . n A 1 75 ILE 75 64 64 ILE ILE A . n A 1 76 ILE 76 65 65 ILE ILE A . n A 1 77 PHE 77 66 66 PHE PHE A . n A 1 78 GLU 78 67 67 GLU GLU A . n A 1 79 SER 79 68 68 SER SER A . n A 1 80 LEU 80 69 69 LEU LEU A . n A 1 81 ASN 81 70 70 ASN ASN A . n A 1 82 GLU 82 71 71 GLU GLU A . n A 1 83 PRO 83 72 72 PRO PRO A . n A 1 84 ALA 84 73 73 ALA ALA A . n A 1 85 VAL 85 74 74 VAL VAL A . n A 1 86 ASP 86 75 75 ASP ASP A . n A 1 87 GLY 87 76 76 GLY GLY A . n A 1 88 LEU 88 77 77 LEU LEU A . n A 1 89 PRO 89 78 78 PRO PRO A . n A 1 90 THR 90 79 79 THR THR A . n A 1 91 GLY 91 80 80 GLY GLY A . n A 1 92 ALA 92 81 81 ALA ALA A . n A 1 93 ALA 93 82 82 ALA ALA A . n A 1 94 PRO 94 83 83 PRO PRO A . n A 1 95 TYR 95 84 84 TYR TYR A . n A 1 96 ALA 96 85 85 ALA ALA A . n A 1 97 GLU 97 86 86 GLU GLU A . n A 1 98 TYR 98 87 87 TYR TYR A . n A 1 99 SER 99 88 88 SER SER A . n A 1 100 GLY 100 89 89 GLY GLY A . n A 1 101 LEU 101 90 90 LEU LEU A . n A 1 102 CYS 102 91 91 CYS CYS A . n A 1 103 ASP 103 92 92 ASP ASP A . n A 1 104 LYS 104 93 93 LYS LYS A . n A 1 105 LEU 105 94 94 LEU LEU A . n A 1 106 MET 106 95 95 MET MET A . n A 1 107 ILE 107 96 96 ILE ILE A . n A 1 108 VAL 108 97 97 VAL VAL A . n A 1 109 HIS 109 98 98 HIS HIS A . n A 1 110 PRO 110 99 99 PRO PRO A . n A 1 111 GLY 111 100 100 GLY GLY A . n A 1 112 LYS 112 101 101 LYS LYS A . n A 1 113 PHE 113 102 102 PHE PHE A . n A 1 114 CYS 114 103 103 CYS CYS A . n A 1 115 PRO 115 104 104 PRO PRO A . n A 1 116 PRO 116 105 105 PRO PRO A . n A 1 117 HIS 117 106 106 HIS HIS A . n A 1 118 HIS 118 107 107 HIS HIS A . n A 1 119 HIS 119 108 108 HIS HIS A . n A 1 120 GLY 120 109 109 GLY GLY A . n A 1 121 ARG 121 110 110 ARG ARG A . n A 1 122 LYS 122 111 111 LYS LYS A . n A 1 123 THR 123 112 112 THR THR A . n A 1 124 GLU 124 113 113 GLU GLU A . n A 1 125 SER 125 114 114 SER SER A . n A 1 126 TYR 126 115 115 TYR TYR A . n A 1 127 GLU 127 116 116 GLU GLU A . n A 1 128 VAL 128 117 117 VAL VAL A . n A 1 129 VAL 129 118 118 VAL VAL A . n A 1 130 LEU 130 119 119 LEU LEU A . n A 1 131 GLY 131 120 120 GLY GLY A . n A 1 132 GLU 132 121 121 GLU GLU A . n A 1 133 MET 133 122 122 MET MET A . n A 1 134 GLU 134 123 123 GLU GLU A . n A 1 135 VAL 135 124 124 VAL VAL A . n A 1 136 PHE 136 125 125 PHE PHE A . n A 1 137 TYR 137 126 126 TYR TYR A . n A 1 138 SER 138 127 127 SER SER A . n A 1 139 PRO 139 128 128 PRO PRO A . n A 1 140 THR 140 129 129 THR THR A . n A 1 141 PRO 141 130 130 PRO PRO A . n A 1 142 SER 142 131 131 SER SER A . n A 1 143 ALA 143 132 132 ALA ALA A . n A 1 144 GLU 144 133 133 GLU GLU A . n A 1 145 SER 145 134 134 SER SER A . n A 1 146 GLY 146 135 135 GLY GLY A . n A 1 147 VAL 147 136 136 VAL VAL A . n A 1 148 GLU 148 137 137 GLU GLU A . n A 1 149 LEU 149 138 138 LEU LEU A . n A 1 150 LEU 150 139 139 LEU LEU A . n A 1 151 ASN 151 140 140 ASN ASN A . n A 1 152 PHE 152 141 141 PHE PHE A . n A 1 153 SER 153 142 142 SER SER A . n A 1 154 GLY 154 143 143 GLY GLY A . n A 1 155 MET 155 144 144 MET MET A . n A 1 156 PRO 156 145 145 PRO PRO A . n A 1 157 VAL 157 146 146 VAL VAL A . n A 1 158 GLY 158 147 147 GLY GLY A . n A 1 159 SER 159 148 148 SER SER A . n A 1 160 PRO 160 149 149 PRO PRO A . n A 1 161 TRP 161 150 150 TRP TRP A . n A 1 162 PRO 162 151 151 PRO PRO A . n A 1 163 GLU 163 152 152 GLU GLU A . n A 1 164 GLY 164 153 153 GLY GLY A . n A 1 165 VAL 165 154 154 VAL VAL A . n A 1 166 ALA 166 155 155 ALA ALA A . n A 1 167 LEU 167 156 156 LEU LEU A . n A 1 168 PRO 168 157 157 PRO PRO A . n A 1 169 LYS 169 158 158 LYS LYS A . n A 1 170 GLY 170 159 159 GLY GLY A . n A 1 171 ARG 171 160 160 ARG ARG A . n A 1 172 GLU 172 161 161 GLU GLU A . n A 1 173 SER 173 162 162 SER SER A . n A 1 174 SER 174 163 163 SER SER A . n A 1 175 TYR 175 164 164 TYR TYR A . n A 1 176 GLU 176 165 165 GLU GLU A . n A 1 177 LYS 177 166 166 LYS LYS A . n A 1 178 LEU 178 167 167 LEU LEU A . n A 1 179 THR 179 168 168 THR THR A . n A 1 180 SER 180 169 169 SER SER A . n A 1 181 TYR 181 170 170 TYR TYR A . n A 1 182 VAL 182 171 171 VAL VAL A . n A 1 183 ARG 183 172 172 ARG ARG A . n A 1 184 LEU 184 173 173 LEU LEU A . n A 1 185 ARG 185 174 174 ARG ARG A . n A 1 186 ALA 186 175 175 ALA ALA A . n A 1 187 GLY 187 176 176 GLY GLY A . n A 1 188 ASP 188 177 177 ASP ASP A . n A 1 189 PRO 189 178 178 PRO PRO A . n A 1 190 LYS 190 179 179 LYS LYS A . n A 1 191 PHE 191 180 180 PHE PHE A . n A 1 192 VAL 192 181 181 VAL VAL A . n A 1 193 MET 193 182 182 MET MET A . n A 1 194 HIS 194 183 183 HIS HIS A . n A 1 195 ARG 195 184 184 ARG ARG A . n A 1 196 LYS 196 185 185 LYS LYS A . n A 1 197 HIS 197 186 186 HIS HIS A . n A 1 198 LEU 198 187 187 LEU LEU A . n A 1 199 HIS 199 188 188 HIS HIS A . n A 1 200 ALA 200 189 189 ALA ALA A . n A 1 201 PHE 201 190 190 PHE PHE A . n A 1 202 ARG 202 191 191 ARG ARG A . n A 1 203 CYS 203 192 192 CYS CYS A . n A 1 204 PRO 204 193 193 PRO PRO A . n A 1 205 PRO 205 194 194 PRO PRO A . n A 1 206 ASP 206 195 195 ASP ASP A . n A 1 207 SER 207 196 196 SER SER A . n A 1 208 ASP 208 197 197 ASP ASP A . n A 1 209 VAL 209 198 198 VAL VAL A . n A 1 210 PRO 210 199 199 PRO PRO A . n A 1 211 LEU 211 200 200 LEU LEU A . n A 1 212 VAL 212 201 201 VAL VAL A . n A 1 213 VAL 213 202 202 VAL VAL A . n A 1 214 ARG 214 203 203 ARG ARG A . n A 1 215 GLN 215 204 204 GLN GLN A . n A 1 216 VAL 216 205 205 VAL VAL A . n A 1 217 SER 217 206 206 SER SER A . n A 1 218 THR 218 207 207 THR THR A . n A 1 219 TYR 219 208 208 TYR TYR A . n A 1 220 SER 220 209 209 SER SER A . n A 1 221 HIS 221 210 210 HIS HIS A . n A 1 222 GLU 222 211 211 GLU GLU A . n A 1 223 PRO 223 212 212 PRO PRO A . n A 1 224 THR 224 213 213 THR THR A . n A 1 225 GLU 225 214 214 GLU GLU A . n A 1 226 ALA 226 215 215 ALA ALA A . n A 1 227 ALA 227 216 216 ALA ALA A . n A 1 228 ALA 228 217 217 ALA ALA A . n A 1 229 GLY 229 218 218 GLY GLY A . n A 1 230 ASN 230 219 219 ASN ASN A . n A 1 231 HIS 231 220 220 HIS HIS A . n A 1 232 ALA 232 221 221 ALA ALA A . n A 1 233 PRO 233 222 222 PRO PRO A . n A 1 234 ILE 234 223 223 ILE ILE A . n A 1 235 PRO 235 224 224 PRO PRO A . n A 1 236 SER 236 225 225 SER SER A . n A 1 237 TRP 237 226 226 TRP TRP A . n A 1 238 LEU 238 227 227 LEU LEU A . n A 1 239 GLY 239 228 228 GLY GLY A . n A 1 240 MET 240 229 229 MET MET A . n A 1 241 HIS 241 230 230 HIS HIS A . n A 1 242 ASP 242 231 231 ASP ASP A . n A 1 243 ASN 243 232 232 ASN ASN A . n A 1 244 ASP 244 233 233 ASP ASP A . n A 1 245 PHE 245 234 234 PHE PHE A . n A 1 246 VAL 246 235 235 VAL VAL A . n A 1 247 SER 247 236 236 SER SER A . n A 1 248 ASP 248 237 237 ASP ASP A . n A 1 249 ALA 249 238 238 ALA ALA A . n A 1 250 ALA 250 239 239 ALA ALA A . n A 1 251 ASN 251 240 240 ASN ASN A . n A 1 252 THR 252 241 241 THR THR A . n A 1 253 GLY 253 242 242 GLY GLY A . n A 1 254 ARG 254 243 243 ARG ARG A . n A 1 255 LEU 255 244 244 LEU LEU A . n A 1 256 GLN 256 245 245 GLN GLN A . n A 1 257 THR 257 246 246 THR THR A . n A 1 258 ALA 258 247 247 ALA ALA A . n A 1 259 ILE 259 248 248 ILE ILE A . n A 1 260 SER 260 249 249 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CO 1 501 501 CO CO A . C 3 ROR 1 502 502 ROR RB0 A . D 4 Z6J 1 503 503 Z6J Z6J A . E 4 Z6J 1 504 504 Z6J Z6J A . F 5 0MK 1 505 505 0MK 0MK A . G 4 Z6J 1 506 506 Z6J Z6J A . H 6 NCO 1 507 507 NCO NCO A . I 7 HOH 1 601 601 HOH HOH A . I 7 HOH 2 602 602 HOH HOH A . I 7 HOH 3 603 603 HOH HOH A . I 7 HOH 4 604 604 HOH HOH A . I 7 HOH 5 605 605 HOH HOH A . I 7 HOH 6 606 606 HOH HOH A . I 7 HOH 7 607 607 HOH HOH A . I 7 HOH 8 608 608 HOH HOH A . I 7 HOH 9 609 609 HOH HOH A . I 7 HOH 10 610 610 HOH HOH A . I 7 HOH 11 611 611 HOH HOH A . I 7 HOH 12 612 612 HOH HOH A . I 7 HOH 13 613 613 HOH HOH A . I 7 HOH 14 614 614 HOH HOH A . I 7 HOH 15 615 615 HOH HOH A . I 7 HOH 16 616 616 HOH HOH A . I 7 HOH 17 617 617 HOH HOH A . I 7 HOH 18 618 618 HOH HOH A . I 7 HOH 19 619 619 HOH HOH A . I 7 HOH 20 620 620 HOH HOH A . I 7 HOH 21 621 621 HOH HOH A . I 7 HOH 22 622 622 HOH HOH A . I 7 HOH 23 623 623 HOH HOH A . I 7 HOH 24 624 624 HOH HOH A . I 7 HOH 25 625 625 HOH HOH A . I 7 HOH 26 626 626 HOH HOH A . I 7 HOH 27 627 627 HOH HOH A . I 7 HOH 28 628 628 HOH HOH A . I 7 HOH 29 629 629 HOH HOH A . I 7 HOH 30 630 630 HOH HOH A . I 7 HOH 31 631 631 HOH HOH A . I 7 HOH 32 632 632 HOH HOH A . I 7 HOH 33 633 633 HOH HOH A . I 7 HOH 34 634 634 HOH HOH A . I 7 HOH 35 635 635 HOH HOH A . I 7 HOH 36 636 636 HOH HOH A . I 7 HOH 37 637 637 HOH HOH A . I 7 HOH 38 638 638 HOH HOH A . I 7 HOH 39 639 639 HOH HOH A . I 7 HOH 40 640 640 HOH HOH A . I 7 HOH 41 641 641 HOH HOH A . I 7 HOH 42 642 642 HOH HOH A . I 7 HOH 43 643 643 HOH HOH A . I 7 HOH 44 644 644 HOH HOH A . I 7 HOH 45 645 645 HOH HOH A . I 7 HOH 46 646 646 HOH HOH A . I 7 HOH 47 647 647 HOH HOH A . I 7 HOH 48 648 648 HOH HOH A . I 7 HOH 49 649 649 HOH HOH A . I 7 HOH 50 650 650 HOH HOH A . I 7 HOH 51 651 651 HOH HOH A . I 7 HOH 52 652 652 HOH HOH A . I 7 HOH 53 653 653 HOH HOH A . I 7 HOH 54 654 654 HOH HOH A . I 7 HOH 55 655 655 HOH HOH A . I 7 HOH 56 656 656 HOH HOH A . I 7 HOH 57 657 657 HOH HOH A . I 7 HOH 58 658 658 HOH HOH A . I 7 HOH 59 659 659 HOH HOH A . I 7 HOH 60 660 660 HOH HOH A . I 7 HOH 61 661 661 HOH HOH A . I 7 HOH 62 662 662 HOH HOH A . I 7 HOH 63 663 663 HOH HOH A . I 7 HOH 64 664 664 HOH HOH A . I 7 HOH 65 665 665 HOH HOH A . I 7 HOH 66 666 666 HOH HOH A . I 7 HOH 67 667 667 HOH HOH A . I 7 HOH 68 668 668 HOH HOH A . I 7 HOH 69 669 669 HOH HOH A . I 7 HOH 70 670 670 HOH HOH A . I 7 HOH 71 671 671 HOH HOH A . I 7 HOH 72 672 672 HOH HOH A . I 7 HOH 73 673 673 HOH HOH A . I 7 HOH 74 674 674 HOH HOH A . I 7 HOH 75 675 675 HOH HOH A . I 7 HOH 76 676 676 HOH HOH A . I 7 HOH 77 677 677 HOH HOH A . I 7 HOH 78 678 678 HOH HOH A . I 7 HOH 79 679 679 HOH HOH A . I 7 HOH 80 680 680 HOH HOH A . I 7 HOH 81 681 681 HOH HOH A . I 7 HOH 82 682 682 HOH HOH A . I 7 HOH 83 683 683 HOH HOH A . I 7 HOH 84 684 684 HOH HOH A . I 7 HOH 85 685 685 HOH HOH A . I 7 HOH 86 686 686 HOH HOH A . I 7 HOH 87 687 687 HOH HOH A . I 7 HOH 88 688 688 HOH HOH A . I 7 HOH 89 689 689 HOH HOH A . I 7 HOH 90 690 690 HOH HOH A . I 7 HOH 91 691 691 HOH HOH A . I 7 HOH 92 692 692 HOH HOH A . I 7 HOH 93 693 693 HOH HOH A . I 7 HOH 94 694 694 HOH HOH A . I 7 HOH 95 695 695 HOH HOH A . I 7 HOH 96 696 696 HOH HOH A . I 7 HOH 97 697 697 HOH HOH A . I 7 HOH 98 698 698 HOH HOH A . I 7 HOH 99 699 699 HOH HOH A . I 7 HOH 100 700 700 HOH HOH A . I 7 HOH 101 701 701 HOH HOH A . I 7 HOH 102 702 702 HOH HOH A . I 7 HOH 103 703 703 HOH HOH A . I 7 HOH 104 704 704 HOH HOH A . I 7 HOH 105 705 705 HOH HOH A . I 7 HOH 106 706 706 HOH HOH A . I 7 HOH 107 707 707 HOH HOH A . I 7 HOH 108 708 708 HOH HOH A . I 7 HOH 109 709 709 HOH HOH A . I 7 HOH 110 710 710 HOH HOH A . I 7 HOH 111 711 711 HOH HOH A . I 7 HOH 112 712 712 HOH HOH A . I 7 HOH 113 713 713 HOH HOH A . I 7 HOH 114 714 714 HOH HOH A . I 7 HOH 115 715 715 HOH HOH A . I 7 HOH 116 716 716 HOH HOH A . I 7 HOH 117 717 717 HOH HOH A . I 7 HOH 118 718 718 HOH HOH A . I 7 HOH 119 719 719 HOH HOH A . I 7 HOH 120 720 720 HOH HOH A . I 7 HOH 121 721 721 HOH HOH A . I 7 HOH 122 722 722 HOH HOH A . I 7 HOH 123 723 723 HOH HOH A . I 7 HOH 124 724 724 HOH HOH A . I 7 HOH 125 725 725 HOH HOH A . I 7 HOH 126 726 726 HOH HOH A . I 7 HOH 127 727 727 HOH HOH A . I 7 HOH 128 728 728 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14720 ? 1 MORE -65 ? 1 'SSA (A^2)' 35850 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 x,-y+1/2,-z+1/2 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 53.5300000000 0.0000000000 0.0000000000 -1.0000000000 59.4450000000 3 'crystal symmetry operation' 11_555 -x+1/2,y,-z+1/2 -1.0000000000 0.0000000000 0.0000000000 48.3650000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 59.4450000000 4 'crystal symmetry operation' 14_555 -x+1/2,-y+1/2,z -1.0000000000 0.0000000000 0.0000000000 48.3650000000 0.0000000000 -1.0000000000 0.0000000000 53.5300000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 117 ? A HIS 106 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 NE2 ? A HIS 119 ? A HIS 108 ? 1_555 91.8 ? 2 NE2 ? A HIS 117 ? A HIS 106 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 OE2 ? A GLU 124 ? A GLU 113 ? 1_555 174.0 ? 3 NE2 ? A HIS 119 ? A HIS 108 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 OE2 ? A GLU 124 ? A GLU 113 ? 1_555 86.8 ? 4 NE2 ? A HIS 117 ? A HIS 106 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 NE2 ? A HIS 199 ? A HIS 188 ? 1_555 83.8 ? 5 NE2 ? A HIS 119 ? A HIS 108 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 NE2 ? A HIS 199 ? A HIS 188 ? 1_555 114.3 ? 6 OE2 ? A GLU 124 ? A GLU 113 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 NE2 ? A HIS 199 ? A HIS 188 ? 1_555 91.5 ? 7 NE2 ? A HIS 117 ? A HIS 106 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 O2 ? C ROR . ? A ROR 502 ? 1_555 93.5 ? 8 NE2 ? A HIS 119 ? A HIS 108 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 O2 ? C ROR . ? A ROR 502 ? 1_555 81.1 ? 9 OE2 ? A GLU 124 ? A GLU 113 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 O2 ? C ROR . ? A ROR 502 ? 1_555 92.0 ? 10 NE2 ? A HIS 199 ? A HIS 188 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 O2 ? C ROR . ? A ROR 502 ? 1_555 164.4 ? 11 NE2 ? A HIS 117 ? A HIS 106 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 O1 ? C ROR . ? A ROR 502 ? 1_555 91.8 ? 12 NE2 ? A HIS 119 ? A HIS 108 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 O1 ? C ROR . ? A ROR 502 ? 1_555 161.1 ? 13 OE2 ? A GLU 124 ? A GLU 113 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 O1 ? C ROR . ? A ROR 502 ? 1_555 91.4 ? 14 NE2 ? A HIS 199 ? A HIS 188 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 O1 ? C ROR . ? A ROR 502 ? 1_555 84.6 ? 15 O2 ? C ROR . ? A ROR 502 ? 1_555 CO ? B CO . ? A CO 501 ? 1_555 O1 ? C ROR . ? A ROR 502 ? 1_555 80.2 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-05-28 2 'Structure model' 1 1 2014-06-11 3 'Structure model' 2 0 2020-07-01 4 'Structure model' 3 0 2020-07-29 5 'Structure model' 3 1 2022-08-24 6 'Structure model' 3 2 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Database references' 5 3 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Atomic model' 7 4 'Structure model' 'Data collection' 8 4 'Structure model' 'Derived calculations' 9 4 'Structure model' 'Structure summary' 10 5 'Structure model' 'Database references' 11 5 'Structure model' 'Structure summary' 12 6 'Structure model' 'Data collection' 13 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' pdbx_struct_conn_angle 4 3 'Structure model' struct_conn 5 3 'Structure model' struct_ref_seq_dif 6 4 'Structure model' atom_site 7 4 'Structure model' chem_comp 8 4 'Structure model' entity 9 4 'Structure model' pdbx_chem_comp_identifier 10 4 'Structure model' pdbx_entity_nonpoly 11 4 'Structure model' pdbx_struct_conn_angle 12 4 'Structure model' struct_conn 13 4 'Structure model' struct_site 14 4 'Structure model' struct_site_gen 15 5 'Structure model' chem_comp 16 5 'Structure model' citation 17 5 'Structure model' database_2 18 6 'Structure model' chem_comp_atom 19 6 'Structure model' chem_comp_bond 20 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_atom_id' 2 3 'Structure model' '_atom_site.label_atom_id' 3 3 'Structure model' '_chem_comp.type' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 6 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 7 3 'Structure model' '_struct_ref_seq_dif.details' 8 4 'Structure model' '_atom_site.auth_atom_id' 9 4 'Structure model' '_atom_site.label_atom_id' 10 4 'Structure model' '_chem_comp.name' 11 4 'Structure model' '_entity.pdbx_description' 12 4 'Structure model' '_pdbx_entity_nonpoly.name' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 4 'Structure model' '_pdbx_struct_conn_angle.value' 24 4 'Structure model' '_struct_conn.pdbx_dist_value' 25 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 30 5 'Structure model' '_chem_comp.pdbx_synonyms' 31 5 'Structure model' '_citation.journal_volume' 32 5 'Structure model' '_citation.page_first' 33 5 'Structure model' '_citation.page_last' 34 5 'Structure model' '_citation.title' 35 5 'Structure model' '_database_2.pdbx_DOI' 36 5 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CrystalClear 'data collection' . ? 1 MOLREP phasing . ? 2 CNS refinement 1.3 ? 3 CrystalClear 'data reduction' . ? 4 CrystalClear 'data scaling' . ? 5 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 CYS _pdbx_validate_rmsd_angle.auth_seq_id_1 103 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 CYS _pdbx_validate_rmsd_angle.auth_seq_id_2 103 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 CYS _pdbx_validate_rmsd_angle.auth_seq_id_3 103 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 90.87 _pdbx_validate_rmsd_angle.angle_target_value 111.00 _pdbx_validate_rmsd_angle.angle_deviation -20.13 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.70 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 70 ? ? -156.37 73.28 2 1 SER A 88 ? ? -108.62 -149.69 3 1 ALA A 132 ? ? -38.23 129.76 4 1 PHE A 141 ? ? -148.02 -59.51 5 1 ARG A 160 ? ? -144.31 15.09 6 1 THR A 213 ? ? -80.30 -155.32 7 1 THR A 241 ? ? -43.93 -78.26 8 1 GLN A 245 ? ? -171.48 123.27 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -10 ? A MET 1 2 1 Y 1 A ARG -9 ? A ARG 2 3 1 Y 1 A GLY -8 ? A GLY 3 4 1 Y 1 A SER -7 ? A SER 4 5 1 Y 1 A HIS -6 ? A HIS 5 6 1 Y 1 A HIS -5 ? A HIS 6 7 1 Y 1 A HIS -4 ? A HIS 7 8 1 Y 1 A HIS -3 ? A HIS 8 9 1 Y 1 A HIS -2 ? A HIS 9 10 1 Y 1 A HIS -1 ? A HIS 10 11 1 Y 1 A GLY 0 ? A GLY 11 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 0MK C1 C N S 1 0MK C2 C N S 2 0MK C3 C N S 3 0MK C4 C N S 4 0MK C5 C N N 5 0MK O1 O N N 6 0MK O2 O N N 7 0MK O3 O N N 8 0MK O4 O N N 9 0MK O5 O N N 10 0MK H1 H N N 11 0MK H2 H N N 12 0MK H3 H N N 13 0MK H4 H N N 14 0MK H51 H N N 15 0MK H52 H N N 16 0MK HO1 H N N 17 0MK HO2 H N N 18 0MK HO3 H N N 19 0MK HO4 H N N 20 ALA N N N N 21 ALA CA C N S 22 ALA C C N N 23 ALA O O N N 24 ALA CB C N N 25 ALA OXT O N N 26 ALA H H N N 27 ALA H2 H N N 28 ALA HA H N N 29 ALA HB1 H N N 30 ALA HB2 H N N 31 ALA HB3 H N N 32 ALA HXT H N N 33 ARG N N N N 34 ARG CA C N S 35 ARG C C N N 36 ARG O O N N 37 ARG CB C N N 38 ARG CG C N N 39 ARG CD C N N 40 ARG NE N N N 41 ARG CZ C N N 42 ARG NH1 N N N 43 ARG NH2 N N N 44 ARG OXT O N N 45 ARG H H N N 46 ARG H2 H N N 47 ARG HA H N N 48 ARG HB2 H N N 49 ARG HB3 H N N 50 ARG HG2 H N N 51 ARG HG3 H N N 52 ARG HD2 H N N 53 ARG HD3 H N N 54 ARG HE H N N 55 ARG HH11 H N N 56 ARG HH12 H N N 57 ARG HH21 H N N 58 ARG HH22 H N N 59 ARG HXT H N N 60 ASN N N N N 61 ASN CA C N S 62 ASN C C N N 63 ASN O O N N 64 ASN CB C N N 65 ASN CG C N N 66 ASN OD1 O N N 67 ASN ND2 N N N 68 ASN OXT O N N 69 ASN H H N N 70 ASN H2 H N N 71 ASN HA H N N 72 ASN HB2 H N N 73 ASN HB3 H N N 74 ASN HD21 H N N 75 ASN HD22 H N N 76 ASN HXT H N N 77 ASP N N N N 78 ASP CA C N S 79 ASP C C N N 80 ASP O O N N 81 ASP CB C N N 82 ASP CG C N N 83 ASP OD1 O N N 84 ASP OD2 O N N 85 ASP OXT O N N 86 ASP H H N N 87 ASP H2 H N N 88 ASP HA H N N 89 ASP HB2 H N N 90 ASP HB3 H N N 91 ASP HD2 H N N 92 ASP HXT H N N 93 CO CO CO N N 94 CYS N N N N 95 CYS CA C N R 96 CYS C C N N 97 CYS O O N N 98 CYS CB C N N 99 CYS SG S N N 100 CYS OXT O N N 101 CYS H H N N 102 CYS H2 H N N 103 CYS HA H N N 104 CYS HB2 H N N 105 CYS HB3 H N N 106 CYS HG H N N 107 CYS HXT H N N 108 GLN N N N N 109 GLN CA C N S 110 GLN C C N N 111 GLN O O N N 112 GLN CB C N N 113 GLN CG C N N 114 GLN CD C N N 115 GLN OE1 O N N 116 GLN NE2 N N N 117 GLN OXT O N N 118 GLN H H N N 119 GLN H2 H N N 120 GLN HA H N N 121 GLN HB2 H N N 122 GLN HB3 H N N 123 GLN HG2 H N N 124 GLN HG3 H N N 125 GLN HE21 H N N 126 GLN HE22 H N N 127 GLN HXT H N N 128 GLU N N N N 129 GLU CA C N S 130 GLU C C N N 131 GLU O O N N 132 GLU CB C N N 133 GLU CG C N N 134 GLU CD C N N 135 GLU OE1 O N N 136 GLU OE2 O N N 137 GLU OXT O N N 138 GLU H H N N 139 GLU H2 H N N 140 GLU HA H N N 141 GLU HB2 H N N 142 GLU HB3 H N N 143 GLU HG2 H N N 144 GLU HG3 H N N 145 GLU HE2 H N N 146 GLU HXT H N N 147 GLY N N N N 148 GLY CA C N N 149 GLY C C N N 150 GLY O O N N 151 GLY OXT O N N 152 GLY H H N N 153 GLY H2 H N N 154 GLY HA2 H N N 155 GLY HA3 H N N 156 GLY HXT H N N 157 HIS N N N N 158 HIS CA C N S 159 HIS C C N N 160 HIS O O N N 161 HIS CB C N N 162 HIS CG C Y N 163 HIS ND1 N Y N 164 HIS CD2 C Y N 165 HIS CE1 C Y N 166 HIS NE2 N Y N 167 HIS OXT O N N 168 HIS H H N N 169 HIS H2 H N N 170 HIS HA H N N 171 HIS HB2 H N N 172 HIS HB3 H N N 173 HIS HD1 H N N 174 HIS HD2 H N N 175 HIS HE1 H N N 176 HIS HE2 H N N 177 HIS HXT H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 ILE N N N N 182 ILE CA C N S 183 ILE C C N N 184 ILE O O N N 185 ILE CB C N S 186 ILE CG1 C N N 187 ILE CG2 C N N 188 ILE CD1 C N N 189 ILE OXT O N N 190 ILE H H N N 191 ILE H2 H N N 192 ILE HA H N N 193 ILE HB H N N 194 ILE HG12 H N N 195 ILE HG13 H N N 196 ILE HG21 H N N 197 ILE HG22 H N N 198 ILE HG23 H N N 199 ILE HD11 H N N 200 ILE HD12 H N N 201 ILE HD13 H N N 202 ILE HXT H N N 203 LEU N N N N 204 LEU CA C N S 205 LEU C C N N 206 LEU O O N N 207 LEU CB C N N 208 LEU CG C N N 209 LEU CD1 C N N 210 LEU CD2 C N N 211 LEU OXT O N N 212 LEU H H N N 213 LEU H2 H N N 214 LEU HA H N N 215 LEU HB2 H N N 216 LEU HB3 H N N 217 LEU HG H N N 218 LEU HD11 H N N 219 LEU HD12 H N N 220 LEU HD13 H N N 221 LEU HD21 H N N 222 LEU HD22 H N N 223 LEU HD23 H N N 224 LEU HXT H N N 225 LYS N N N N 226 LYS CA C N S 227 LYS C C N N 228 LYS O O N N 229 LYS CB C N N 230 LYS CG C N N 231 LYS CD C N N 232 LYS CE C N N 233 LYS NZ N N N 234 LYS OXT O N N 235 LYS H H N N 236 LYS H2 H N N 237 LYS HA H N N 238 LYS HB2 H N N 239 LYS HB3 H N N 240 LYS HG2 H N N 241 LYS HG3 H N N 242 LYS HD2 H N N 243 LYS HD3 H N N 244 LYS HE2 H N N 245 LYS HE3 H N N 246 LYS HZ1 H N N 247 LYS HZ2 H N N 248 LYS HZ3 H N N 249 LYS HXT H N N 250 MET N N N N 251 MET CA C N S 252 MET C C N N 253 MET O O N N 254 MET CB C N N 255 MET CG C N N 256 MET SD S N N 257 MET CE C N N 258 MET OXT O N N 259 MET H H N N 260 MET H2 H N N 261 MET HA H N N 262 MET HB2 H N N 263 MET HB3 H N N 264 MET HG2 H N N 265 MET HG3 H N N 266 MET HE1 H N N 267 MET HE2 H N N 268 MET HE3 H N N 269 MET HXT H N N 270 NCO CO CO N N 271 NCO N1 N N N 272 NCO N2 N N N 273 NCO N3 N N N 274 NCO N4 N N N 275 NCO N5 N N N 276 NCO N6 N N N 277 NCO HN11 H N N 278 NCO HN12 H N N 279 NCO HN13 H N N 280 NCO HN21 H N N 281 NCO HN22 H N N 282 NCO HN23 H N N 283 NCO HN31 H N N 284 NCO HN32 H N N 285 NCO HN33 H N N 286 NCO HN41 H N N 287 NCO HN42 H N N 288 NCO HN43 H N N 289 NCO HN51 H N N 290 NCO HN52 H N N 291 NCO HN53 H N N 292 NCO HN61 H N N 293 NCO HN62 H N N 294 NCO HN63 H N N 295 PHE N N N N 296 PHE CA C N S 297 PHE C C N N 298 PHE O O N N 299 PHE CB C N N 300 PHE CG C Y N 301 PHE CD1 C Y N 302 PHE CD2 C Y N 303 PHE CE1 C Y N 304 PHE CE2 C Y N 305 PHE CZ C Y N 306 PHE OXT O N N 307 PHE H H N N 308 PHE H2 H N N 309 PHE HA H N N 310 PHE HB2 H N N 311 PHE HB3 H N N 312 PHE HD1 H N N 313 PHE HD2 H N N 314 PHE HE1 H N N 315 PHE HE2 H N N 316 PHE HZ H N N 317 PHE HXT H N N 318 PRO N N N N 319 PRO CA C N S 320 PRO C C N N 321 PRO O O N N 322 PRO CB C N N 323 PRO CG C N N 324 PRO CD C N N 325 PRO OXT O N N 326 PRO H H N N 327 PRO HA H N N 328 PRO HB2 H N N 329 PRO HB3 H N N 330 PRO HG2 H N N 331 PRO HG3 H N N 332 PRO HD2 H N N 333 PRO HD3 H N N 334 PRO HXT H N N 335 ROR C5 C N N 336 ROR O5 O N N 337 ROR C4 C N S 338 ROR O4 O N N 339 ROR C3 C N S 340 ROR O3 O N N 341 ROR C2 C N S 342 ROR O2 O N N 343 ROR C1 C N N 344 ROR O1 O N N 345 ROR H51 H N N 346 ROR H52 H N N 347 ROR HO5 H N N 348 ROR H4 H N N 349 ROR HO4 H N N 350 ROR H3 H N N 351 ROR HO3 H N N 352 ROR H2 H N N 353 ROR HO2 H N N 354 ROR H1 H N N 355 SER N N N N 356 SER CA C N S 357 SER C C N N 358 SER O O N N 359 SER CB C N N 360 SER OG O N N 361 SER OXT O N N 362 SER H H N N 363 SER H2 H N N 364 SER HA H N N 365 SER HB2 H N N 366 SER HB3 H N N 367 SER HG H N N 368 SER HXT H N N 369 THR N N N N 370 THR CA C N S 371 THR C C N N 372 THR O O N N 373 THR CB C N R 374 THR OG1 O N N 375 THR CG2 C N N 376 THR OXT O N N 377 THR H H N N 378 THR H2 H N N 379 THR HA H N N 380 THR HB H N N 381 THR HG1 H N N 382 THR HG21 H N N 383 THR HG22 H N N 384 THR HG23 H N N 385 THR HXT H N N 386 TRP N N N N 387 TRP CA C N S 388 TRP C C N N 389 TRP O O N N 390 TRP CB C N N 391 TRP CG C Y N 392 TRP CD1 C Y N 393 TRP CD2 C Y N 394 TRP NE1 N Y N 395 TRP CE2 C Y N 396 TRP CE3 C Y N 397 TRP CZ2 C Y N 398 TRP CZ3 C Y N 399 TRP CH2 C Y N 400 TRP OXT O N N 401 TRP H H N N 402 TRP H2 H N N 403 TRP HA H N N 404 TRP HB2 H N N 405 TRP HB3 H N N 406 TRP HD1 H N N 407 TRP HE1 H N N 408 TRP HE3 H N N 409 TRP HZ2 H N N 410 TRP HZ3 H N N 411 TRP HH2 H N N 412 TRP HXT H N N 413 TYR N N N N 414 TYR CA C N S 415 TYR C C N N 416 TYR O O N N 417 TYR CB C N N 418 TYR CG C Y N 419 TYR CD1 C Y N 420 TYR CD2 C Y N 421 TYR CE1 C Y N 422 TYR CE2 C Y N 423 TYR CZ C Y N 424 TYR OH O N N 425 TYR OXT O N N 426 TYR H H N N 427 TYR H2 H N N 428 TYR HA H N N 429 TYR HB2 H N N 430 TYR HB3 H N N 431 TYR HD1 H N N 432 TYR HD2 H N N 433 TYR HE1 H N N 434 TYR HE2 H N N 435 TYR HH H N N 436 TYR HXT H N N 437 VAL N N N N 438 VAL CA C N S 439 VAL C C N N 440 VAL O O N N 441 VAL CB C N N 442 VAL CG1 C N N 443 VAL CG2 C N N 444 VAL OXT O N N 445 VAL H H N N 446 VAL H2 H N N 447 VAL HA H N N 448 VAL HB H N N 449 VAL HG11 H N N 450 VAL HG12 H N N 451 VAL HG13 H N N 452 VAL HG21 H N N 453 VAL HG22 H N N 454 VAL HG23 H N N 455 VAL HXT H N N 456 Z6J O5 O N N 457 Z6J C5 C N N 458 Z6J C4 C N S 459 Z6J O4 O N N 460 Z6J C3 C N R 461 Z6J O3 O N N 462 Z6J C2 C N S 463 Z6J O2 O N N 464 Z6J C1 C N R 465 Z6J O1 O N N 466 Z6J H51 H N N 467 Z6J H52 H N N 468 Z6J H4 H N N 469 Z6J H3 H N N 470 Z6J HO3 H N N 471 Z6J H2 H N N 472 Z6J HO2 H N N 473 Z6J H1 H N N 474 Z6J HO1 H N N 475 Z6J HO5 H N N 476 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 0MK O4 C4 sing N N 1 0MK C4 C5 sing N N 2 0MK C4 C3 sing N N 3 0MK C5 O5 sing N N 4 0MK C3 O3 sing N N 5 0MK C3 C2 sing N N 6 0MK O5 C1 sing N N 7 0MK C2 C1 sing N N 8 0MK C2 O2 sing N N 9 0MK C1 O1 sing N N 10 0MK C1 H1 sing N N 11 0MK C2 H2 sing N N 12 0MK C3 H3 sing N N 13 0MK C4 H4 sing N N 14 0MK C5 H51 sing N N 15 0MK C5 H52 sing N N 16 0MK O1 HO1 sing N N 17 0MK O2 HO2 sing N N 18 0MK O3 HO3 sing N N 19 0MK O4 HO4 sing N N 20 ALA N CA sing N N 21 ALA N H sing N N 22 ALA N H2 sing N N 23 ALA CA C sing N N 24 ALA CA CB sing N N 25 ALA CA HA sing N N 26 ALA C O doub N N 27 ALA C OXT sing N N 28 ALA CB HB1 sing N N 29 ALA CB HB2 sing N N 30 ALA CB HB3 sing N N 31 ALA OXT HXT sing N N 32 ARG N CA sing N N 33 ARG N H sing N N 34 ARG N H2 sing N N 35 ARG CA C sing N N 36 ARG CA CB sing N N 37 ARG CA HA sing N N 38 ARG C O doub N N 39 ARG C OXT sing N N 40 ARG CB CG sing N N 41 ARG CB HB2 sing N N 42 ARG CB HB3 sing N N 43 ARG CG CD sing N N 44 ARG CG HG2 sing N N 45 ARG CG HG3 sing N N 46 ARG CD NE sing N N 47 ARG CD HD2 sing N N 48 ARG CD HD3 sing N N 49 ARG NE CZ sing N N 50 ARG NE HE sing N N 51 ARG CZ NH1 sing N N 52 ARG CZ NH2 doub N N 53 ARG NH1 HH11 sing N N 54 ARG NH1 HH12 sing N N 55 ARG NH2 HH21 sing N N 56 ARG NH2 HH22 sing N N 57 ARG OXT HXT sing N N 58 ASN N CA sing N N 59 ASN N H sing N N 60 ASN N H2 sing N N 61 ASN CA C sing N N 62 ASN CA CB sing N N 63 ASN CA HA sing N N 64 ASN C O doub N N 65 ASN C OXT sing N N 66 ASN CB CG sing N N 67 ASN CB HB2 sing N N 68 ASN CB HB3 sing N N 69 ASN CG OD1 doub N N 70 ASN CG ND2 sing N N 71 ASN ND2 HD21 sing N N 72 ASN ND2 HD22 sing N N 73 ASN OXT HXT sing N N 74 ASP N CA sing N N 75 ASP N H sing N N 76 ASP N H2 sing N N 77 ASP CA C sing N N 78 ASP CA CB sing N N 79 ASP CA HA sing N N 80 ASP C O doub N N 81 ASP C OXT sing N N 82 ASP CB CG sing N N 83 ASP CB HB2 sing N N 84 ASP CB HB3 sing N N 85 ASP CG OD1 doub N N 86 ASP CG OD2 sing N N 87 ASP OD2 HD2 sing N N 88 ASP OXT HXT sing N N 89 CYS N CA sing N N 90 CYS N H sing N N 91 CYS N H2 sing N N 92 CYS CA C sing N N 93 CYS CA CB sing N N 94 CYS CA HA sing N N 95 CYS C O doub N N 96 CYS C OXT sing N N 97 CYS CB SG sing N N 98 CYS CB HB2 sing N N 99 CYS CB HB3 sing N N 100 CYS SG HG sing N N 101 CYS OXT HXT sing N N 102 GLN N CA sing N N 103 GLN N H sing N N 104 GLN N H2 sing N N 105 GLN CA C sing N N 106 GLN CA CB sing N N 107 GLN CA HA sing N N 108 GLN C O doub N N 109 GLN C OXT sing N N 110 GLN CB CG sing N N 111 GLN CB HB2 sing N N 112 GLN CB HB3 sing N N 113 GLN CG CD sing N N 114 GLN CG HG2 sing N N 115 GLN CG HG3 sing N N 116 GLN CD OE1 doub N N 117 GLN CD NE2 sing N N 118 GLN NE2 HE21 sing N N 119 GLN NE2 HE22 sing N N 120 GLN OXT HXT sing N N 121 GLU N CA sing N N 122 GLU N H sing N N 123 GLU N H2 sing N N 124 GLU CA C sing N N 125 GLU CA CB sing N N 126 GLU CA HA sing N N 127 GLU C O doub N N 128 GLU C OXT sing N N 129 GLU CB CG sing N N 130 GLU CB HB2 sing N N 131 GLU CB HB3 sing N N 132 GLU CG CD sing N N 133 GLU CG HG2 sing N N 134 GLU CG HG3 sing N N 135 GLU CD OE1 doub N N 136 GLU CD OE2 sing N N 137 GLU OE2 HE2 sing N N 138 GLU OXT HXT sing N N 139 GLY N CA sing N N 140 GLY N H sing N N 141 GLY N H2 sing N N 142 GLY CA C sing N N 143 GLY CA HA2 sing N N 144 GLY CA HA3 sing N N 145 GLY C O doub N N 146 GLY C OXT sing N N 147 GLY OXT HXT sing N N 148 HIS N CA sing N N 149 HIS N H sing N N 150 HIS N H2 sing N N 151 HIS CA C sing N N 152 HIS CA CB sing N N 153 HIS CA HA sing N N 154 HIS C O doub N N 155 HIS C OXT sing N N 156 HIS CB CG sing N N 157 HIS CB HB2 sing N N 158 HIS CB HB3 sing N N 159 HIS CG ND1 sing Y N 160 HIS CG CD2 doub Y N 161 HIS ND1 CE1 doub Y N 162 HIS ND1 HD1 sing N N 163 HIS CD2 NE2 sing Y N 164 HIS CD2 HD2 sing N N 165 HIS CE1 NE2 sing Y N 166 HIS CE1 HE1 sing N N 167 HIS NE2 HE2 sing N N 168 HIS OXT HXT sing N N 169 HOH O H1 sing N N 170 HOH O H2 sing N N 171 ILE N CA sing N N 172 ILE N H sing N N 173 ILE N H2 sing N N 174 ILE CA C sing N N 175 ILE CA CB sing N N 176 ILE CA HA sing N N 177 ILE C O doub N N 178 ILE C OXT sing N N 179 ILE CB CG1 sing N N 180 ILE CB CG2 sing N N 181 ILE CB HB sing N N 182 ILE CG1 CD1 sing N N 183 ILE CG1 HG12 sing N N 184 ILE CG1 HG13 sing N N 185 ILE CG2 HG21 sing N N 186 ILE CG2 HG22 sing N N 187 ILE CG2 HG23 sing N N 188 ILE CD1 HD11 sing N N 189 ILE CD1 HD12 sing N N 190 ILE CD1 HD13 sing N N 191 ILE OXT HXT sing N N 192 LEU N CA sing N N 193 LEU N H sing N N 194 LEU N H2 sing N N 195 LEU CA C sing N N 196 LEU CA CB sing N N 197 LEU CA HA sing N N 198 LEU C O doub N N 199 LEU C OXT sing N N 200 LEU CB CG sing N N 201 LEU CB HB2 sing N N 202 LEU CB HB3 sing N N 203 LEU CG CD1 sing N N 204 LEU CG CD2 sing N N 205 LEU CG HG sing N N 206 LEU CD1 HD11 sing N N 207 LEU CD1 HD12 sing N N 208 LEU CD1 HD13 sing N N 209 LEU CD2 HD21 sing N N 210 LEU CD2 HD22 sing N N 211 LEU CD2 HD23 sing N N 212 LEU OXT HXT sing N N 213 LYS N CA sing N N 214 LYS N H sing N N 215 LYS N H2 sing N N 216 LYS CA C sing N N 217 LYS CA CB sing N N 218 LYS CA HA sing N N 219 LYS C O doub N N 220 LYS C OXT sing N N 221 LYS CB CG sing N N 222 LYS CB HB2 sing N N 223 LYS CB HB3 sing N N 224 LYS CG CD sing N N 225 LYS CG HG2 sing N N 226 LYS CG HG3 sing N N 227 LYS CD CE sing N N 228 LYS CD HD2 sing N N 229 LYS CD HD3 sing N N 230 LYS CE NZ sing N N 231 LYS CE HE2 sing N N 232 LYS CE HE3 sing N N 233 LYS NZ HZ1 sing N N 234 LYS NZ HZ2 sing N N 235 LYS NZ HZ3 sing N N 236 LYS OXT HXT sing N N 237 MET N CA sing N N 238 MET N H sing N N 239 MET N H2 sing N N 240 MET CA C sing N N 241 MET CA CB sing N N 242 MET CA HA sing N N 243 MET C O doub N N 244 MET C OXT sing N N 245 MET CB CG sing N N 246 MET CB HB2 sing N N 247 MET CB HB3 sing N N 248 MET CG SD sing N N 249 MET CG HG2 sing N N 250 MET CG HG3 sing N N 251 MET SD CE sing N N 252 MET CE HE1 sing N N 253 MET CE HE2 sing N N 254 MET CE HE3 sing N N 255 MET OXT HXT sing N N 256 NCO CO N1 sing N N 257 NCO CO N2 sing N N 258 NCO CO N3 sing N N 259 NCO CO N4 sing N N 260 NCO CO N5 sing N N 261 NCO CO N6 sing N N 262 NCO N1 HN11 sing N N 263 NCO N1 HN12 sing N N 264 NCO N1 HN13 sing N N 265 NCO N2 HN21 sing N N 266 NCO N2 HN22 sing N N 267 NCO N2 HN23 sing N N 268 NCO N3 HN31 sing N N 269 NCO N3 HN32 sing N N 270 NCO N3 HN33 sing N N 271 NCO N4 HN41 sing N N 272 NCO N4 HN42 sing N N 273 NCO N4 HN43 sing N N 274 NCO N5 HN51 sing N N 275 NCO N5 HN52 sing N N 276 NCO N5 HN53 sing N N 277 NCO N6 HN61 sing N N 278 NCO N6 HN62 sing N N 279 NCO N6 HN63 sing N N 280 PHE N CA sing N N 281 PHE N H sing N N 282 PHE N H2 sing N N 283 PHE CA C sing N N 284 PHE CA CB sing N N 285 PHE CA HA sing N N 286 PHE C O doub N N 287 PHE C OXT sing N N 288 PHE CB CG sing N N 289 PHE CB HB2 sing N N 290 PHE CB HB3 sing N N 291 PHE CG CD1 doub Y N 292 PHE CG CD2 sing Y N 293 PHE CD1 CE1 sing Y N 294 PHE CD1 HD1 sing N N 295 PHE CD2 CE2 doub Y N 296 PHE CD2 HD2 sing N N 297 PHE CE1 CZ doub Y N 298 PHE CE1 HE1 sing N N 299 PHE CE2 CZ sing Y N 300 PHE CE2 HE2 sing N N 301 PHE CZ HZ sing N N 302 PHE OXT HXT sing N N 303 PRO N CA sing N N 304 PRO N CD sing N N 305 PRO N H sing N N 306 PRO CA C sing N N 307 PRO CA CB sing N N 308 PRO CA HA sing N N 309 PRO C O doub N N 310 PRO C OXT sing N N 311 PRO CB CG sing N N 312 PRO CB HB2 sing N N 313 PRO CB HB3 sing N N 314 PRO CG CD sing N N 315 PRO CG HG2 sing N N 316 PRO CG HG3 sing N N 317 PRO CD HD2 sing N N 318 PRO CD HD3 sing N N 319 PRO OXT HXT sing N N 320 ROR O5 C5 sing N N 321 ROR C5 C4 sing N N 322 ROR O4 C4 sing N N 323 ROR C4 C3 sing N N 324 ROR O2 C2 sing N N 325 ROR C3 C2 sing N N 326 ROR C3 O3 sing N N 327 ROR C1 C2 sing N N 328 ROR C1 O1 doub N N 329 ROR C5 H51 sing N N 330 ROR C5 H52 sing N N 331 ROR O5 HO5 sing N N 332 ROR C4 H4 sing N N 333 ROR O4 HO4 sing N N 334 ROR C3 H3 sing N N 335 ROR O3 HO3 sing N N 336 ROR C2 H2 sing N N 337 ROR O2 HO2 sing N N 338 ROR C1 H1 sing N N 339 SER N CA sing N N 340 SER N H sing N N 341 SER N H2 sing N N 342 SER CA C sing N N 343 SER CA CB sing N N 344 SER CA HA sing N N 345 SER C O doub N N 346 SER C OXT sing N N 347 SER CB OG sing N N 348 SER CB HB2 sing N N 349 SER CB HB3 sing N N 350 SER OG HG sing N N 351 SER OXT HXT sing N N 352 THR N CA sing N N 353 THR N H sing N N 354 THR N H2 sing N N 355 THR CA C sing N N 356 THR CA CB sing N N 357 THR CA HA sing N N 358 THR C O doub N N 359 THR C OXT sing N N 360 THR CB OG1 sing N N 361 THR CB CG2 sing N N 362 THR CB HB sing N N 363 THR OG1 HG1 sing N N 364 THR CG2 HG21 sing N N 365 THR CG2 HG22 sing N N 366 THR CG2 HG23 sing N N 367 THR OXT HXT sing N N 368 TRP N CA sing N N 369 TRP N H sing N N 370 TRP N H2 sing N N 371 TRP CA C sing N N 372 TRP CA CB sing N N 373 TRP CA HA sing N N 374 TRP C O doub N N 375 TRP C OXT sing N N 376 TRP CB CG sing N N 377 TRP CB HB2 sing N N 378 TRP CB HB3 sing N N 379 TRP CG CD1 doub Y N 380 TRP CG CD2 sing Y N 381 TRP CD1 NE1 sing Y N 382 TRP CD1 HD1 sing N N 383 TRP CD2 CE2 doub Y N 384 TRP CD2 CE3 sing Y N 385 TRP NE1 CE2 sing Y N 386 TRP NE1 HE1 sing N N 387 TRP CE2 CZ2 sing Y N 388 TRP CE3 CZ3 doub Y N 389 TRP CE3 HE3 sing N N 390 TRP CZ2 CH2 doub Y N 391 TRP CZ2 HZ2 sing N N 392 TRP CZ3 CH2 sing Y N 393 TRP CZ3 HZ3 sing N N 394 TRP CH2 HH2 sing N N 395 TRP OXT HXT sing N N 396 TYR N CA sing N N 397 TYR N H sing N N 398 TYR N H2 sing N N 399 TYR CA C sing N N 400 TYR CA CB sing N N 401 TYR CA HA sing N N 402 TYR C O doub N N 403 TYR C OXT sing N N 404 TYR CB CG sing N N 405 TYR CB HB2 sing N N 406 TYR CB HB3 sing N N 407 TYR CG CD1 doub Y N 408 TYR CG CD2 sing Y N 409 TYR CD1 CE1 sing Y N 410 TYR CD1 HD1 sing N N 411 TYR CD2 CE2 doub Y N 412 TYR CD2 HD2 sing N N 413 TYR CE1 CZ doub Y N 414 TYR CE1 HE1 sing N N 415 TYR CE2 CZ sing Y N 416 TYR CE2 HE2 sing N N 417 TYR CZ OH sing N N 418 TYR OH HH sing N N 419 TYR OXT HXT sing N N 420 VAL N CA sing N N 421 VAL N H sing N N 422 VAL N H2 sing N N 423 VAL CA C sing N N 424 VAL CA CB sing N N 425 VAL CA HA sing N N 426 VAL C O doub N N 427 VAL C OXT sing N N 428 VAL CB CG1 sing N N 429 VAL CB CG2 sing N N 430 VAL CB HB sing N N 431 VAL CG1 HG11 sing N N 432 VAL CG1 HG12 sing N N 433 VAL CG1 HG13 sing N N 434 VAL CG2 HG21 sing N N 435 VAL CG2 HG22 sing N N 436 VAL CG2 HG23 sing N N 437 VAL OXT HXT sing N N 438 Z6J O5 C5 sing N N 439 Z6J C5 C4 sing N N 440 Z6J C4 O4 sing N N 441 Z6J C4 C3 sing N N 442 Z6J O4 C1 sing N N 443 Z6J C3 O3 sing N N 444 Z6J C3 C2 sing N N 445 Z6J C2 O2 sing N N 446 Z6J C2 C1 sing N N 447 Z6J C1 O1 sing N N 448 Z6J C5 H51 sing N N 449 Z6J C5 H52 sing N N 450 Z6J C4 H4 sing N N 451 Z6J C3 H3 sing N N 452 Z6J C1 H1 sing N N 453 Z6J O3 HO3 sing N N 454 Z6J C2 H2 sing N N 455 Z6J O2 HO2 sing N N 456 Z6J O1 HO1 sing N N 457 Z6J O5 HO5 sing N N 458 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier 0MK 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LRibpb 0MK 'COMMON NAME' GMML 1.0 b-L-ribopyranose 0MK 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-L-Ribp 0MK 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Rib Z6J 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LRibfa Z6J 'COMMON NAME' GMML 1.0 a-L-ribofuranose Z6J 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Ribf Z6J 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Rib # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'COBALT (II) ION' CO 3 L-ribose ROR 4 alpha-L-ribofuranose Z6J 5 beta-L-ribopyranose 0MK 6 'COBALT HEXAMMINE(III)' NCO 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4Q0P _pdbx_initial_refinement_model.details 'PDB ENTRY 4Q0P' #