HEADER HYDROLASE 07-APR-14 4Q2D TITLE CRYSTAL STRUCTURE OF CRISPR-ASSOCIATED PROTEIN IN COMPLEX WITH 2'- TITLE 2 DEOXYADENOSINE 5'-TRIPHOSPHATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CRISPR-ASSOCIATED HELICASE CAS3; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: NUCLEASE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOBACULUM TERRENUM; SOURCE 3 ORGANISM_TAXID: 525904; SOURCE 4 STRAIN: ATCC BAA-798; SOURCE 5 GENE: TTER_1895; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RECA, HD NUCLEASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.GONG,M.SHIN,J.SUN,J.VAN DER OOST,J.-S.KIM REVDAT 4 06-DEC-23 4Q2D 1 REMARK REVDAT 3 08-NOV-23 4Q2D 1 REMARK REVDAT 2 24-AUG-22 4Q2D 1 JRNL REMARK SEQADV LINK REVDAT 1 19-NOV-14 4Q2D 0 JRNL AUTH B.GONG,M.SHIN,J.SUN,C.H.JUNG,E.L.BOLT,J.VAN DER OOST,J.S.KIM JRNL TITL MOLECULAR INSIGHTS INTO DNA INTERFERENCE BY JRNL TITL 2 CRISPR-ASSOCIATED NUCLEASE-HELICASE CAS3. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 16359 2014 JRNL REFN ESSN 1091-6490 JRNL PMID 25368186 JRNL DOI 10.1073/PNAS.1410806111 REMARK 2 REMARK 2 RESOLUTION. 2.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.66 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.460 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 3 NUMBER OF REFLECTIONS : 28749 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.6613 - 5.9663 0.99 2982 158 0.1751 0.1663 REMARK 3 2 5.9663 - 4.7372 0.99 2868 150 0.1791 0.2233 REMARK 3 3 4.7372 - 4.1388 0.99 2846 150 0.1620 0.2322 REMARK 3 4 4.1388 - 3.7606 0.99 2817 149 0.1856 0.2371 REMARK 3 5 3.7606 - 3.4912 0.98 2784 146 0.2000 0.2196 REMARK 3 6 3.4912 - 3.2854 0.98 2760 146 0.2231 0.2932 REMARK 3 7 3.2854 - 3.1209 0.97 2749 144 0.2527 0.2755 REMARK 3 8 3.1209 - 2.9851 0.96 2706 142 0.2777 0.3275 REMARK 3 9 2.9851 - 2.8702 0.93 2643 139 0.2962 0.3525 REMARK 3 10 2.8702 - 2.7711 0.76 2156 114 0.3139 0.3588 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.400 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 39.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 7417 REMARK 3 ANGLE : 0.849 10114 REMARK 3 CHIRALITY : 0.064 1113 REMARK 3 PLANARITY : 0.004 1320 REMARK 3 DIHEDRAL : 14.102 2723 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -28.7902 28.5366 -3.7592 REMARK 3 T TENSOR REMARK 3 T11: 0.2338 T22: 0.2612 REMARK 3 T33: 0.2371 T12: -0.0010 REMARK 3 T13: -0.0030 T23: 0.0412 REMARK 3 L TENSOR REMARK 3 L11: 0.4648 L22: 1.1157 REMARK 3 L33: 0.8397 L12: 0.1597 REMARK 3 L13: 0.0300 L23: 0.5063 REMARK 3 S TENSOR REMARK 3 S11: -0.0144 S12: -0.0433 S13: 0.0365 REMARK 3 S21: 0.0011 S22: 0.0376 S23: -0.0412 REMARK 3 S31: 0.0574 S32: 0.1070 S33: -0.0112 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Q2D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 15-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000085516. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28764 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.771 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 83.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: 4Q2C REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.78 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.2M SODIUM CHLORIDE, 0.1M SODIUM REMARK 280 PHOSPHATE MONOBASIC MONOHYDRATE, 0.1M POTASSIUM PHOSPHATE REMARK 280 MONOBASIC, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.13600 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.13600 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 52.84200 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 105.81500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 52.84200 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 105.81500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 52.13600 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 52.84200 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 105.81500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 52.13600 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 52.84200 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 105.81500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 GLY A -3 REMARK 465 GLY A -2 REMARK 465 GLY A -1 REMARK 465 GLY A 0 REMARK 465 MSE A 1 REMARK 465 ASN A 2 REMARK 465 GLY A 3 REMARK 465 GLY A 4 REMARK 465 PRO A 5 REMARK 465 GLY A 6 REMARK 465 MSE A 7 REMARK 465 ASP A 8 REMARK 465 GLY A 9 REMARK 465 THR A 10 REMARK 465 SER A 11 REMARK 465 GLU A 12 REMARK 465 VAL A 13 REMARK 465 ASP A 14 REMARK 465 LEU A 15 REMARK 465 SER A 16 REMARK 465 GLY A 17 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 701 NH1 ARG A 704 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 VAL A 29 -54.61 27.50 REMARK 500 ASP A 30 101.57 68.77 REMARK 500 SER A 40 -82.89 -126.31 REMARK 500 VAL A 67 -51.54 -120.94 REMARK 500 GLN A 115 54.33 -117.26 REMARK 500 ARG A 183 -67.46 -157.07 REMARK 500 SER A 290 46.43 -173.99 REMARK 500 PRO A 379 -176.11 -61.26 REMARK 500 GLU A 478 87.84 49.20 REMARK 500 THR A 510 144.21 -172.99 REMARK 500 ALA A 547 -169.20 -108.66 REMARK 500 ALA A 548 -75.52 -62.25 REMARK 500 THR A 663 -154.03 -86.86 REMARK 500 SER A 669 -42.90 65.32 REMARK 500 ALA A 821 143.56 65.17 REMARK 500 LEU A 830 -167.21 65.46 REMARK 500 ALA A 833 -80.11 -116.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1001 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 52 NE2 REMARK 620 2 HIS A 98 NE2 91.0 REMARK 620 3 ASP A 99 OD2 93.0 78.9 REMARK 620 4 ASP A 237 OD1 88.2 70.2 149.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A1002 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 99 OD1 REMARK 620 2 HIS A 138 NE2 80.2 REMARK 620 3 HIS A 171 NE2 95.1 107.8 REMARK 620 4 HIS A 172 NE2 164.4 84.6 86.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1004 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 DTP A1005 O3G REMARK 620 2 DTP A1005 O1B 77.6 REMARK 620 3 HOH A1141 O 69.0 113.9 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1004 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTP A 1005 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Q2C RELATED DB: PDB DBREF 4Q2D A 1 944 UNP D1CGD0 D1CGD0_THET1 1 944 SEQADV 4Q2D GLY A -4 UNP D1CGD0 EXPRESSION TAG SEQADV 4Q2D GLY A -3 UNP D1CGD0 EXPRESSION TAG SEQADV 4Q2D GLY A -2 UNP D1CGD0 EXPRESSION TAG SEQADV 4Q2D GLY A -1 UNP D1CGD0 EXPRESSION TAG SEQADV 4Q2D GLY A 0 UNP D1CGD0 EXPRESSION TAG SEQRES 1 A 949 GLY GLY GLY GLY GLY MSE ASN GLY GLY PRO GLY MSE ASP SEQRES 2 A 949 GLY THR SER GLU VAL ASP LEU SER GLY ALA GLY SER PRO SEQRES 3 A 949 VAL GLY ALA ALA GLY TRP ARG VAL ASP PRO TRP ILE PHE SEQRES 4 A 949 TRP ALA LYS TRP GLY SER GLY PRO ASP LEU GLY TRP HIS SEQRES 5 A 949 PRO LEU LEU CYS HIS MSE LEU ASP VAL ALA ALA VAL THR SEQRES 6 A 949 LEU GLN MSE TRP ARG ARG VAL LEU PRO ALA ALA TRP LYS SEQRES 7 A 949 ALA ARG ILE SER GLY VAL LEU GLY VAL GLY GLN GLU ASP SEQRES 8 A 949 ALA GLU ARG TRP LEU ALA PHE PHE ALA GLY GLY HIS ASP SEQRES 9 A 949 ILE GLY LYS ALA SER PRO ALA PHE GLN LEU GLN LEU ARG SEQRES 10 A 949 PRO GLU GLN GLY ARG GLU LEU VAL ALA ARG ARG LEU ARG SEQRES 11 A 949 ASP ALA GLY LEU PRO LEU PHE ASN ALA ARG ALA PRO HIS SEQRES 12 A 949 GLY THR ILE SER ALA ASN VAL LEU GLU THR VAL LEU ALA SEQRES 13 A 949 ASP VAL PHE GLY LEU SER GLY ARG SER ALA ARG TRP VAL SEQRES 14 A 949 ALA PHE ALA VAL GLY GLY HIS HIS GLY PHE VAL PRO SER SEQRES 15 A 949 TYR ASP GLU VAL ARG ARG ASP LEU ASP GLN GLN ALA VAL SEQRES 16 A 949 GLY TRP GLY MSE TRP ASP ALA ALA ARG GLU VAL LEU LEU SEQRES 17 A 949 CYS ARG LEU ALA ASP ALA LEU GLY LEU PRO GLY SER SER SEQRES 18 A 949 ARG PRO THR VAL GLU SER THR PRO ASP ALA PHE MSE LEU SEQRES 19 A 949 ALA GLY LEU VAL SER VAL ALA ASP TRP ILE GLY SER ASN SEQRES 20 A 949 GLU GLU TYR PHE PRO TYR ALA ALA GLN SER ALA LEU GLN SEQRES 21 A 949 VAL PRO GLN LEU ASP ALA GLU ALA TYR LEU GLU ARG ALA SEQRES 22 A 949 MSE ARG GLN ALA GLU ARG ALA MSE ALA SER LEU GLY TRP SEQRES 23 A 949 VAL GLY TRP ARG PRO ALA SER GLY SER MSE ARG LEU THR SEQRES 24 A 949 GLU LEU PHE PRO TYR ILE ARG GLN PRO THR THR VAL GLN SEQRES 25 A 949 ALA ALA ALA GLU GLU LEU ALA GLY GLU VAL LYS SER PRO SEQRES 26 A 949 SER ILE THR ILE ILE GLU ALA PRO MSE GLY GLU GLY LYS SEQRES 27 A 949 THR GLU ALA ALA MSE LEU LEU ALA ASP THR PHE SER THR SEQRES 28 A 949 ALA HIS GLY MSE SER GLY CYS TYR PHE ALA LEU PRO THR SEQRES 29 A 949 MSE ALA THR SER ASN GLN MSE PHE GLY ARG VAL THR ASP SEQRES 30 A 949 TYR LEU ARG HIS ARG TYR PRO GLU ASP VAL VAL VAL VAL SEQRES 31 A 949 ASN LEU VAL HIS GLY HIS SER ASP LEU SER ALA LEU LEU SEQRES 32 A 949 GLN GLU LEU ARG GLN LYS GLY GLU GLU ILE PHE GLN LEU SEQRES 33 A 949 GLN GLY VAL TYR ASP GLU ALA LEU GLY ASP GLU GLN LEU SEQRES 34 A 949 GLY ALA VAL VAL ALA GLY GLN TRP PHE THR ARG GLY LYS SEQRES 35 A 949 ARG ALA LEU LEU PRO PRO TYR GLY VAL GLY THR VAL ASP SEQRES 36 A 949 GLN ALA LEU LEU ALA VAL LEU GLN VAL LYS HIS VAL PHE SEQRES 37 A 949 VAL ARG LEU PHE ALA LEU SER THR LYS THR VAL ILE VAL SEQRES 38 A 949 ASP GLU VAL HIS ALA TYR ASP VAL TYR MSE THR THR LEU SEQRES 39 A 949 LEU HIS ARG LEU LEU GLU TRP LEU GLY ALA LEU SER VAL SEQRES 40 A 949 PRO VAL VAL VAL LEU SER ALA THR LEU PRO SER ALA ARG SEQRES 41 A 949 ARG ARG GLU LEU VAL LYS ALA TYR ALA ARG GLY ALA GLY SEQRES 42 A 949 TRP GLN ALA GLU ARG ASP LEU PRO PRO ALA GLY TYR PRO SEQRES 43 A 949 ARG ILE THR TYR ALA ALA ALA GLU ASP VAL ARG GLY ILE SEQRES 44 A 949 HIS PHE ALA PRO SER GLU ALA SER ARG ARG LYS VAL ALA SEQRES 45 A 949 LEU ARG TRP VAL SER ALA PRO GLU HIS GLU ALA LEU GLY SEQRES 46 A 949 GLN LEU LEU ALA GLU ALA LEU SER GLN GLY GLY CYS ALA SEQRES 47 A 949 ALA ILE ILE CYS ASN THR VAL PRO ARG ALA GLN ALA LEU SEQRES 48 A 949 TYR SER ALA LEU ARG GLU VAL PHE PRO GLY LEU ALA GLU SEQRES 49 A 949 ASP GLY MSE PRO GLU LEU ASP LEU LEU HIS ALA ARG TYR SEQRES 50 A 949 PRO TYR GLU GLU ARG GLU VAL ARG GLU ALA ARG THR LEU SEQRES 51 A 949 GLY ARG PHE SER ARG ASN GLY ARG ARG PRO HIS ARG ALA SEQRES 52 A 949 ILE LEU VAL ALA THR GLN VAL ILE GLU GLN SER LEU ASP SEQRES 53 A 949 LEU ASP PHE ASP LEU MSE VAL THR ASP LEU ALA PRO VAL SEQRES 54 A 949 ASP LEU VAL LEU GLN ARG MSE GLY ARG LEU HIS ARG HIS SEQRES 55 A 949 PRO VAL HIS ASP PRO LEU ARG PRO GLU ARG LEU ARG SER SEQRES 56 A 949 PRO GLU LEU TRP VAL VAL SER PRO GLN VAL MSE GLY ASP SEQRES 57 A 949 VAL PRO ILE PHE ASP ARG GLY SER ALA SER VAL TYR ASP SEQRES 58 A 949 GLU HIS THR LEU LEU ARG SER TRP LEU ALA LEU ARG ASP SEQRES 59 A 949 ARG ASP THR LEU GLN LEU PRO GLU ASP ILE GLU GLU LEU SEQRES 60 A 949 VAL GLU GLN VAL TYR SER ASP GLY ARG VAL PRO GLN GLY SEQRES 61 A 949 ALA SER GLU GLU LEU ARG SER LEU TRP GLU ARG THR PHE SEQRES 62 A 949 LYS ALA GLN GLN LYS VAL LEU ARG GLU ASP SER LEU GLN SEQRES 63 A 949 ALA LYS TYR ARG TYR ILE LYS GLY PRO GLY TYR ASN SER SEQRES 64 A 949 ILE TRP GLY ILE VAL THR ALA SER VAL GLU GLU ASP ALA SEQRES 65 A 949 PRO GLU LEU HIS PRO ALA LEU GLN ALA LEU THR ARG LEU SEQRES 66 A 949 ALA GLU PRO SER VAL SER ALA VAL CYS LEU VAL ALA GLY SEQRES 67 A 949 SER GLY GLY PRO CYS LEU PRO ASP GLY THR PRO VAL ASP SEQRES 68 A 949 LEU ASP THR PRO PRO ASP ALA ALA MSE ALA GLU ARG LEU SEQRES 69 A 949 LEU ARG ARG SER VAL ALA ILE THR ASP ALA ARG VAL LEU SEQRES 70 A 949 ASP PRO LEU LEU ASP VAL PRO VAL PRO LYS GLY TRP GLU SEQRES 71 A 949 ARG SER SER LEU LEU ARG GLY TYR ARG PRO LEU VAL PHE SEQRES 72 A 949 ASP ALA SER GLY ARG ALA MSE VAL GLY ARG TRP ILE VAL SEQRES 73 A 949 ARG ILE ASP PRO GLU LEU GLY ILE VAL VAL GLU SER PRO MODRES 4Q2D MSE A 53 MET SELENOMETHIONINE MODRES 4Q2D MSE A 63 MET SELENOMETHIONINE MODRES 4Q2D MSE A 194 MET SELENOMETHIONINE MODRES 4Q2D MSE A 228 MET SELENOMETHIONINE MODRES 4Q2D MSE A 269 MET SELENOMETHIONINE MODRES 4Q2D MSE A 276 MET SELENOMETHIONINE MODRES 4Q2D MSE A 291 MET SELENOMETHIONINE MODRES 4Q2D MSE A 329 MET SELENOMETHIONINE MODRES 4Q2D MSE A 338 MET SELENOMETHIONINE MODRES 4Q2D MSE A 350 MET SELENOMETHIONINE MODRES 4Q2D MSE A 360 MET SELENOMETHIONINE MODRES 4Q2D MSE A 366 MET SELENOMETHIONINE MODRES 4Q2D MSE A 486 MET SELENOMETHIONINE MODRES 4Q2D MSE A 622 MET SELENOMETHIONINE MODRES 4Q2D MSE A 677 MET SELENOMETHIONINE MODRES 4Q2D MSE A 691 MET SELENOMETHIONINE MODRES 4Q2D MSE A 721 MET SELENOMETHIONINE MODRES 4Q2D MSE A 875 MET SELENOMETHIONINE MODRES 4Q2D MSE A 925 MET SELENOMETHIONINE HET MSE A 53 8 HET MSE A 63 8 HET MSE A 194 8 HET MSE A 228 8 HET MSE A 269 8 HET MSE A 276 8 HET MSE A 291 8 HET MSE A 329 8 HET MSE A 338 8 HET MSE A 350 8 HET MSE A 360 8 HET MSE A 366 8 HET MSE A 486 8 HET MSE A 622 8 HET MSE A 677 8 HET MSE A 691 8 HET MSE A 721 8 HET MSE A 875 8 HET MSE A 925 8 HET NI A1001 1 HET NI A1002 1 HET NI A1003 1 HET MG A1004 1 HET DTP A1005 30 HETNAM MSE SELENOMETHIONINE HETNAM NI NICKEL (II) ION HETNAM MG MAGNESIUM ION HETNAM DTP 2'-DEOXYADENOSINE 5'-TRIPHOSPHATE FORMUL 1 MSE 19(C5 H11 N O2 SE) FORMUL 2 NI 3(NI 2+) FORMUL 5 MG MG 2+ FORMUL 6 DTP C10 H16 N5 O12 P3 FORMUL 7 HOH *107(H2 O) HELIX 1 1 GLY A 23 VAL A 29 1 7 HELIX 2 2 ASP A 30 ILE A 33 5 4 HELIX 3 3 LEU A 49 VAL A 67 1 19 HELIX 4 4 PRO A 69 GLY A 81 1 13 HELIX 5 5 GLY A 83 GLY A 97 1 15 HELIX 6 6 HIS A 98 ALA A 103 5 6 HELIX 7 7 SER A 104 LEU A 109 1 6 HELIX 8 8 GLN A 110 LEU A 111 5 2 HELIX 9 9 ARG A 112 GLN A 115 5 4 HELIX 10 10 GLY A 116 GLY A 128 1 13 HELIX 11 11 PRO A 137 VAL A 153 1 17 HELIX 12 12 SER A 157 GLY A 170 1 14 HELIX 13 13 SER A 177 ARG A 183 1 7 HELIX 14 14 ASP A 186 GLY A 191 1 6 HELIX 15 15 GLY A 193 GLY A 211 1 19 HELIX 16 16 SER A 222 SER A 241 1 20 HELIX 17 17 ASP A 260 LEU A 279 1 20 HELIX 18 18 ARG A 292 PHE A 297 1 6 HELIX 19 19 THR A 304 GLY A 315 1 12 HELIX 20 20 GLY A 332 HIS A 348 1 17 HELIX 21 21 SER A 363 ARG A 375 1 13 HELIX 22 22 GLU A 380 VAL A 385 1 6 HELIX 23 23 VAL A 385 GLY A 390 1 6 HELIX 24 24 ASP A 393 GLN A 403 1 11 HELIX 25 25 ASP A 421 GLN A 431 1 11 HELIX 26 26 TRP A 432 THR A 434 5 3 HELIX 27 27 ARG A 435 LEU A 441 5 7 HELIX 28 28 VAL A 449 LEU A 454 1 6 HELIX 29 29 ALA A 455 LEU A 457 5 3 HELIX 30 30 HIS A 461 THR A 471 1 11 HELIX 31 31 HIS A 480 THR A 487 1 8 HELIX 32 32 THR A 488 LEU A 500 1 13 HELIX 33 33 PRO A 512 GLY A 528 1 17 HELIX 34 34 SER A 559 ARG A 563 5 5 HELIX 35 35 SER A 572 GLU A 577 5 6 HELIX 36 36 ALA A 578 LEU A 587 1 10 HELIX 37 37 THR A 599 ARG A 611 1 13 HELIX 38 38 PRO A 633 SER A 649 1 17 HELIX 39 39 PRO A 683 GLY A 692 1 10 HELIX 40 40 HIS A 697 ASP A 701 5 5 HELIX 41 41 PRO A 705 ARG A 709 5 5 HELIX 42 42 ASP A 728 TYR A 735 1 8 HELIX 43 43 ASP A 736 ARG A 748 1 13 HELIX 44 44 PRO A 756 TYR A 767 1 12 HELIX 45 45 SER A 777 GLN A 801 1 25 HELIX 46 46 ALA A 802 ARG A 805 5 4 HELIX 47 47 ALA A 833 THR A 838 1 6 HELIX 48 48 ASP A 872 ARG A 881 1 10 HELIX 49 49 ASP A 888 VAL A 898 1 11 HELIX 50 50 PRO A 901 ARG A 906 1 6 SHEET 1 A 2 TRP A 35 TRP A 38 0 SHEET 2 A 2 TRP A 46 PRO A 48 -1 O HIS A 47 N ALA A 36 SHEET 1 B 7 TYR A 444 THR A 448 0 SHEET 2 B 7 CYS A 353 LEU A 357 1 N LEU A 357 O GLY A 447 SHEET 3 B 7 THR A 473 VAL A 476 1 O ILE A 475 N ALA A 356 SHEET 4 B 7 VAL A 504 SER A 508 1 O LEU A 507 N VAL A 476 SHEET 5 B 7 ILE A 322 GLU A 326 1 N THR A 323 O VAL A 506 SHEET 6 B 7 ARG A 542 ALA A 546 -1 O ARG A 542 N GLU A 326 SHEET 7 B 7 VAL A 551 HIS A 555 -1 O ARG A 552 N TYR A 545 SHEET 1 C 7 LEU A 625 LEU A 628 0 SHEET 2 C 7 ARG A 657 ALA A 662 1 O VAL A 661 N ASP A 626 SHEET 3 C 7 GLY A 591 ILE A 596 1 N ALA A 593 O LEU A 660 SHEET 4 C 7 LEU A 676 ASP A 680 1 O VAL A 678 N ALA A 594 SHEET 5 C 7 GLU A 712 VAL A 716 1 O VAL A 716 N THR A 679 SHEET 6 C 7 LYS A 565 VAL A 571 1 N ALA A 567 O LEU A 713 SHEET 7 C 7 THR A 752 GLN A 754 -1 O LEU A 753 N VAL A 566 SHEET 1 D 2 GLN A 719 MSE A 721 0 SHEET 2 D 2 VAL A 724 ILE A 726 -1 O VAL A 724 N MSE A 721 SHEET 1 E 3 SER A 883 ILE A 886 0 SHEET 2 E 3 VAL A 845 VAL A 851 -1 N VAL A 845 O ILE A 886 SHEET 3 E 3 TYR A 913 PHE A 918 1 O LEU A 916 N VAL A 848 SHEET 1 F 3 ARG A 923 VAL A 926 0 SHEET 2 F 3 TRP A 929 ASP A 934 -1 O VAL A 931 N ALA A 924 SHEET 3 F 3 GLY A 938 GLU A 942 -1 O GLU A 942 N ILE A 930 LINK C HIS A 52 N MSE A 53 1555 1555 1.33 LINK C MSE A 53 N LEU A 54 1555 1555 1.33 LINK C GLN A 62 N MSE A 63 1555 1555 1.33 LINK C MSE A 63 N TRP A 64 1555 1555 1.33 LINK C GLY A 193 N MSE A 194 1555 1555 1.33 LINK C MSE A 194 N TRP A 195 1555 1555 1.33 LINK C PHE A 227 N MSE A 228 1555 1555 1.33 LINK C MSE A 228 N LEU A 229 1555 1555 1.33 LINK C ALA A 268 N MSE A 269 1555 1555 1.33 LINK C MSE A 269 N ARG A 270 1555 1555 1.33 LINK C ALA A 275 N MSE A 276 1555 1555 1.33 LINK C MSE A 276 N ALA A 277 1555 1555 1.33 LINK C SER A 290 N MSE A 291 1555 1555 1.33 LINK C MSE A 291 N ARG A 292 1555 1555 1.33 LINK C PRO A 328 N MSE A 329 1555 1555 1.33 LINK C MSE A 329 N GLY A 330 1555 1555 1.33 LINK C ALA A 337 N MSE A 338 1555 1555 1.33 LINK C MSE A 338 N LEU A 339 1555 1555 1.33 LINK C GLY A 349 N MSE A 350 1555 1555 1.33 LINK C MSE A 350 N SER A 351 1555 1555 1.33 LINK C THR A 359 N MSE A 360 1555 1555 1.33 LINK C MSE A 360 N ALA A 361 1555 1555 1.33 LINK C GLN A 365 N MSE A 366 1555 1555 1.33 LINK C MSE A 366 N PHE A 367 1555 1555 1.33 LINK C TYR A 485 N MSE A 486 1555 1555 1.33 LINK C MSE A 486 N THR A 487 1555 1555 1.33 LINK C GLY A 621 N MSE A 622 1555 1555 1.33 LINK C MSE A 622 N PRO A 623 1555 1555 1.35 LINK C LEU A 676 N MSE A 677 1555 1555 1.33 LINK C MSE A 677 N VAL A 678 1555 1555 1.33 LINK C ARG A 690 N MSE A 691 1555 1555 1.33 LINK C MSE A 691 N GLY A 692 1555 1555 1.33 LINK C VAL A 720 N MSE A 721 1555 1555 1.33 LINK C MSE A 721 N GLY A 722 1555 1555 1.33 LINK C ALA A 874 N MSE A 875 1555 1555 1.33 LINK C MSE A 875 N ALA A 876 1555 1555 1.33 LINK C ALA A 924 N MSE A 925 1555 1555 1.33 LINK C MSE A 925 N VAL A 926 1555 1555 1.33 LINK NE2 HIS A 52 NI NI A1001 1555 1555 2.10 LINK NE2 HIS A 98 NI NI A1001 1555 1555 2.39 LINK OD2 ASP A 99 NI NI A1001 1555 1555 1.94 LINK OD1 ASP A 99 NI NI A1002 1555 1555 2.40 LINK NE2 HIS A 138 NI NI A1002 1555 1555 2.11 LINK NE2 HIS A 171 NI NI A1002 1555 1555 2.29 LINK NE2 HIS A 172 NI NI A1002 1555 1555 2.31 LINK OD1 ASP A 237 NI NI A1001 1555 1555 1.92 LINK MG MG A1004 O3G DTP A1005 1555 1555 2.13 LINK MG MG A1004 O1B DTP A1005 1555 1555 2.35 LINK MG MG A1004 O HOH A1141 1555 1555 2.88 CISPEP 1 PRO A 213 GLY A 214 0 -8.92 CISPEP 2 VAL A 282 GLY A 283 0 -5.34 CISPEP 3 SER A 288 GLY A 289 0 -5.22 CISPEP 4 LYS A 404 GLY A 405 0 -3.93 CISPEP 5 TYR A 540 PRO A 541 0 -10.73 CISPEP 6 LEU A 755 PRO A 756 0 0.36 CISPEP 7 ALA A 821 SER A 822 0 -5.02 CISPEP 8 GLU A 825 ASP A 826 0 -10.07 CISPEP 9 ASP A 826 ALA A 827 0 -2.03 CISPEP 10 GLU A 829 LEU A 830 0 17.52 CISPEP 11 ASP A 861 GLY A 862 0 -8.15 SITE 1 AC1 7 HIS A 52 HIS A 98 ASP A 99 LYS A 102 SITE 2 AC1 7 ASP A 237 NI A1002 NI A1003 SITE 1 AC2 6 ASP A 99 HIS A 138 HIS A 171 HIS A 172 SITE 2 AC2 6 NI A1001 NI A1003 SITE 1 AC3 7 LYS A 37 ASP A 99 LYS A 102 HIS A 172 SITE 2 AC3 7 ASP A 237 NI A1001 NI A1002 SITE 1 AC4 4 THR A 334 ASP A 477 DTP A1005 HOH A1141 SITE 1 AC5 16 ILE A 300 THR A 304 GLN A 307 MSE A 329 SITE 2 AC5 16 GLY A 330 GLY A 332 LYS A 333 THR A 334 SITE 3 AC5 16 GLU A 335 ARG A 369 ASP A 671 GLN A 689 SITE 4 AC5 16 ARG A 693 ARG A 696 MG A1004 HOH A1141 CRYST1 105.684 211.630 104.272 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009462 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004725 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009590 0.00000