HEADER ISOMERASE 08-APR-14 4Q2H TITLE CRYSTAL STRUCTURE OF PROBABLE PROLINE RACEMASE FROM AGROBACTERIUM TITLE 2 RADIOBACTER K84, TARGET EFI-506561, WITH BOUND CARBONATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROLINE RACEMASE PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AGROBACTERIUM RADIOBACTER K84; SOURCE 3 ORGANISM_TAXID: 311403; SOURCE 4 STRAIN: K84 / ATCC BAA-868; SOURCE 5 GENE: ARAD_0731; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) KEYWDS PROLINE RACEMASE FAMILY, PROBABLE PROLINE RACEMASE, ENZYME FUNCTION KEYWDS 2 INITIATIVE, EFI, STRUCTURAL GENOMICS, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,R.BHOSLE,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN, AUTHOR 2 S.SOJITRA,M.STEAD,E.WASHINGTON,A.S.GLENN,S.CHOWDHURY,B.EVANS, AUTHOR 3 J.HAMMONDS,B.HILLERICH,J.LOVE,R.D.SEIDEL,J.A.GERLT,S.C.ALMO,ENZYME AUTHOR 4 FUNCTION INITIATIVE (EFI) REVDAT 4 06-DEC-23 4Q2H 1 REMARK REVDAT 3 20-SEP-23 4Q2H 1 REMARK SEQADV LINK REVDAT 2 24-JAN-18 4Q2H 1 AUTHOR JRNL REVDAT 1 30-APR-14 4Q2H 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,R.BHOSLE,N.F.AL OBAIDI,L.L.MORISCO, JRNL AUTH 2 S.R.WASSERMAN,S.SOJITRA,M.STEAD,E.WASHINGTON,A.S.GLENN, JRNL AUTH 3 S.CHOWDHURY,B.EVANS,J.HAMMONDS,B.HILLERICH,J.LOVE, JRNL AUTH 4 R.D.SEIDEL,J.A.GERLT,S.C.ALMO, JRNL AUTH 5 ENZYME FUNCTION INITIATIVE (EFI) JRNL TITL CRYSTAL STRUCTURE OF PROLINE RACEMASE ARAD_0731 FROM JRNL TITL 2 AGROBACTERIUM RADIOBACTER, TARGET EFI-506561 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 69949 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.147 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2156 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4955 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.55 REMARK 3 BIN R VALUE (WORKING SET) : 0.2400 REMARK 3 BIN FREE R VALUE SET COUNT : 160 REMARK 3 BIN FREE R VALUE : 0.2790 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5102 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 14 REMARK 3 SOLVENT ATOMS : 679 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.47000 REMARK 3 B22 (A**2) : 1.83000 REMARK 3 B33 (A**2) : -1.36000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.093 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.072 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.624 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.977 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.970 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5312 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5172 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7248 ; 1.349 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11906 ; 0.740 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 712 ; 5.968 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 208 ;34.797 ;23.462 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 854 ;13.115 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 43 ;18.207 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 850 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6078 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1141 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2779 ; 4.689 ; 4.290 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2778 ; 4.689 ; 4.290 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3481 ; 4.678 ; 6.360 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3482 ; 4.677 ; 6.360 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2533 ;11.235 ; 5.374 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2533 ;11.233 ; 5.374 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3757 ;10.943 ; 7.548 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 6237 ;11.510 ;16.837 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 6238 ;11.509 ;16.840 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 345 REMARK 3 ORIGIN FOR THE GROUP (A): -15.3404 -2.5641 28.0926 REMARK 3 T TENSOR REMARK 3 T11: 0.0353 T22: 0.0163 REMARK 3 T33: 0.0089 T12: 0.0219 REMARK 3 T13: -0.0059 T23: 0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.8929 L22: 1.4914 REMARK 3 L33: 1.7721 L12: -0.0544 REMARK 3 L13: -0.4436 L23: 0.5487 REMARK 3 S TENSOR REMARK 3 S11: 0.0751 S12: 0.0848 S13: 0.0341 REMARK 3 S21: -0.1783 S22: -0.0788 S23: 0.0962 REMARK 3 S31: -0.1816 S32: -0.1150 S33: 0.0037 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 345 REMARK 3 ORIGIN FOR THE GROUP (A): 4.4571 -27.0218 12.3361 REMARK 3 T TENSOR REMARK 3 T11: 0.0445 T22: 0.0200 REMARK 3 T33: 0.0158 T12: 0.0224 REMARK 3 T13: -0.0047 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.7363 L22: 1.1824 REMARK 3 L33: 1.8306 L12: -0.0317 REMARK 3 L13: -0.1771 L23: 0.7436 REMARK 3 S TENSOR REMARK 3 S11: -0.0226 S12: -0.0421 S13: -0.0816 REMARK 3 S21: 0.0168 S22: 0.1029 S23: -0.1156 REMARK 3 S31: 0.1570 S32: 0.1593 S33: -0.0803 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4Q2H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000085520. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72154 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.08500 REMARK 200 R SYM (I) : 0.08500 REMARK 200 FOR THE DATA SET : 20.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.40 REMARK 200 R MERGE FOR SHELL (I) : 0.91000 REMARK 200 R SYM FOR SHELL (I) : 0.91000 REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4LB0 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15 MM BIS-TRIS, 500 MM NACL, 10% REMARK 280 GLYCEROL, 5 MM DTT, TEV PROTEASE (1:100 RATIO); RESERVOIR: 0.4 M REMARK 280 POTASSIUM PHOSPHATE MONOBASIC, 16% PEG8000, 20% GLYCEROL, PH 8.0, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.35150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.35150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 33.71500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 64.73500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 33.71500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 64.73500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 89.35150 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 33.71500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 64.73500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 89.35150 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 33.71500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 64.73500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 629 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 681 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 836 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 HIS A -15 REMARK 465 SER A -14 REMARK 465 SER A -13 REMARK 465 GLY A -12 REMARK 465 VAL A -11 REMARK 465 ASP A -10 REMARK 465 LEU A -9 REMARK 465 GLY A -8 REMARK 465 THR A -7 REMARK 465 GLU A -6 REMARK 465 ASN A -5 REMARK 465 LEU A -4 REMARK 465 TYR A -3 REMARK 465 PHE A -2 REMARK 465 GLN A -1 REMARK 465 MET B -21 REMARK 465 HIS B -20 REMARK 465 HIS B -19 REMARK 465 HIS B -18 REMARK 465 HIS B -17 REMARK 465 HIS B -16 REMARK 465 HIS B -15 REMARK 465 SER B -14 REMARK 465 SER B -13 REMARK 465 GLY B -12 REMARK 465 VAL B -11 REMARK 465 ASP B -10 REMARK 465 LEU B -9 REMARK 465 GLY B -8 REMARK 465 THR B -7 REMARK 465 GLU B -6 REMARK 465 ASN B -5 REMARK 465 LEU B -4 REMARK 465 TYR B -3 REMARK 465 PHE B -2 REMARK 465 GLN B -1 REMARK 465 SER B 0 REMARK 465 MET B 1 REMARK 465 ARG B 2 REMARK 465 TRP B 3 REMARK 465 LYS B 4 REMARK 465 ARG B 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 2 CG CD NE CZ NH1 NH2 REMARK 470 TRP A 3 CG CD1 CD2 NE1 CE2 CE3 CZ2 REMARK 470 TRP A 3 CZ3 CH2 REMARK 470 ARG B 138 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TRP A 3 9.98 83.59 REMARK 500 CSO A 255 99.90 86.47 REMARK 500 CSO A 255 100.08 86.76 REMARK 500 CSO B 255 98.98 84.99 REMARK 500 CSO B 255 98.62 82.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCT A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BCT B 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-506561 RELATED DB: TARGETTRACK DBREF 4Q2H A 1 345 UNP B9J8G8 B9J8G8_AGRRK 1 345 DBREF 4Q2H B 1 345 UNP B9J8G8 B9J8G8_AGRRK 1 345 SEQADV 4Q2H MET A -21 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS A -20 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS A -19 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS A -18 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS A -17 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS A -16 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS A -15 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H SER A -14 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H SER A -13 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H GLY A -12 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H VAL A -11 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H ASP A -10 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H LEU A -9 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H GLY A -8 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H THR A -7 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H GLU A -6 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H ASN A -5 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H LEU A -4 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H TYR A -3 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H PHE A -2 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H GLN A -1 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H SER A 0 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H MET B -21 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS B -20 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS B -19 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS B -18 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS B -17 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS B -16 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H HIS B -15 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H SER B -14 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H SER B -13 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H GLY B -12 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H VAL B -11 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H ASP B -10 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H LEU B -9 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H GLY B -8 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H THR B -7 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H GLU B -6 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H ASN B -5 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H LEU B -4 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H TYR B -3 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H PHE B -2 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H GLN B -1 UNP B9J8G8 EXPRESSION TAG SEQADV 4Q2H SER B 0 UNP B9J8G8 EXPRESSION TAG SEQRES 1 A 367 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 367 GLY THR GLU ASN LEU TYR PHE GLN SER MET ARG TRP LYS SEQRES 3 A 367 ARG THR ILE GLN LEU LEU ASP VAL HIS CYS GLU GLY GLU SEQRES 4 A 367 ILE GLY ARG VAL ALA ILE GLY GLY VAL PRO LYS ILE PRO SEQRES 5 A 367 GLY ASN THR VAL ALA GLU GLN LEU HIS TRP LEU ASN THR SEQRES 6 A 367 ASP PRO LYS GLY GLU GLU LEU ARG ARG PHE LEU VAL LEU SEQRES 7 A 367 GLU PRO ARG GLY ALA PRO ILE GLY SER VAL ASN LEU LEU SEQRES 8 A 367 LEU PRO ALA ARG HIS PRO ASP ALA ASP ALA ALA PHE ILE SEQRES 9 A 367 ILE LEU GLN PRO ASP GLN ALA HIS ALA SER SER GLY SER SEQRES 10 A 367 ASN SER ILE CYS VAL THR THR ALA LEU LEU GLU SER GLY SEQRES 11 A 367 ILE VAL GLU MET LYS GLU PRO GLU THR VAL VAL THR LEU SEQRES 12 A 367 GLU THR ALA ALA GLY LEU VAL ARG ALA THR ALA THR CYS SEQRES 13 A 367 ARG ASP GLY ARG CYS GLU LYS VAL ARG LEU THR MET VAL SEQRES 14 A 367 PRO SER PHE VAL HIS GLU LEU ASP VAL GLY ILE ASP THR SEQRES 15 A 367 PRO GLN TRP GLY ARG ILE LYS LEU ASP LEU CYS TYR GLY SEQRES 16 A 367 GLY ILE PHE TYR ALA LEU VAL ASP VAL GLY GLN ILE GLY SEQRES 17 A 367 LEU THR ILE GLY LYS ALA ASN ALA ALA SER LEU VAL GLN SEQRES 18 A 367 ALA GLY MET VAL LEU LYS GLU LEU ILE ASN ARG THR VAL SEQRES 19 A 367 PRO VAL VAL HIS PRO GLU ILE PRO ALA ILE SER GLY VAL SEQRES 20 A 367 ALA TYR VAL MET PHE ARG ASP ILE ASP ALA ASP GLY ALA SEQRES 21 A 367 ILE ARG THR CYS THR THR MET TRP PRO GLY ARG ALA ASP SEQRES 22 A 367 ARG SER PRO CSO GLY THR GLY ASN SER ALA ASN LEU ALA SEQRES 23 A 367 THR LEU HIS ALA ARG GLY LYS ALA ARG VAL GLY ASP VAL SEQRES 24 A 367 PHE LYS SER ARG SER ILE ILE GLY SER GLU PHE GLU VAL SEQRES 25 A 367 GLY LEU GLN ALA GLU THR GLU VAL ALA GLY LYS PRO ALA SEQRES 26 A 367 ILE ILE PRO THR ILE THR GLY ARG GLY PHE THR PHE GLY SEQRES 27 A 367 LEU SER GLN VAL ALA LEU ASP PRO PHE ASP PRO MET ALA SEQRES 28 A 367 ASN GLY PHE ALA LEU THR ASP VAL TRP GLY PRO LEU ALA SEQRES 29 A 367 GLY ASP ILE SEQRES 1 B 367 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 367 GLY THR GLU ASN LEU TYR PHE GLN SER MET ARG TRP LYS SEQRES 3 B 367 ARG THR ILE GLN LEU LEU ASP VAL HIS CYS GLU GLY GLU SEQRES 4 B 367 ILE GLY ARG VAL ALA ILE GLY GLY VAL PRO LYS ILE PRO SEQRES 5 B 367 GLY ASN THR VAL ALA GLU GLN LEU HIS TRP LEU ASN THR SEQRES 6 B 367 ASP PRO LYS GLY GLU GLU LEU ARG ARG PHE LEU VAL LEU SEQRES 7 B 367 GLU PRO ARG GLY ALA PRO ILE GLY SER VAL ASN LEU LEU SEQRES 8 B 367 LEU PRO ALA ARG HIS PRO ASP ALA ASP ALA ALA PHE ILE SEQRES 9 B 367 ILE LEU GLN PRO ASP GLN ALA HIS ALA SER SER GLY SER SEQRES 10 B 367 ASN SER ILE CYS VAL THR THR ALA LEU LEU GLU SER GLY SEQRES 11 B 367 ILE VAL GLU MET LYS GLU PRO GLU THR VAL VAL THR LEU SEQRES 12 B 367 GLU THR ALA ALA GLY LEU VAL ARG ALA THR ALA THR CYS SEQRES 13 B 367 ARG ASP GLY ARG CYS GLU LYS VAL ARG LEU THR MET VAL SEQRES 14 B 367 PRO SER PHE VAL HIS GLU LEU ASP VAL GLY ILE ASP THR SEQRES 15 B 367 PRO GLN TRP GLY ARG ILE LYS LEU ASP LEU CYS TYR GLY SEQRES 16 B 367 GLY ILE PHE TYR ALA LEU VAL ASP VAL GLY GLN ILE GLY SEQRES 17 B 367 LEU THR ILE GLY LYS ALA ASN ALA ALA SER LEU VAL GLN SEQRES 18 B 367 ALA GLY MET VAL LEU LYS GLU LEU ILE ASN ARG THR VAL SEQRES 19 B 367 PRO VAL VAL HIS PRO GLU ILE PRO ALA ILE SER GLY VAL SEQRES 20 B 367 ALA TYR VAL MET PHE ARG ASP ILE ASP ALA ASP GLY ALA SEQRES 21 B 367 ILE ARG THR CYS THR THR MET TRP PRO GLY ARG ALA ASP SEQRES 22 B 367 ARG SER PRO CSO GLY THR GLY ASN SER ALA ASN LEU ALA SEQRES 23 B 367 THR LEU HIS ALA ARG GLY LYS ALA ARG VAL GLY ASP VAL SEQRES 24 B 367 PHE LYS SER ARG SER ILE ILE GLY SER GLU PHE GLU VAL SEQRES 25 B 367 GLY LEU GLN ALA GLU THR GLU VAL ALA GLY LYS PRO ALA SEQRES 26 B 367 ILE ILE PRO THR ILE THR GLY ARG GLY PHE THR PHE GLY SEQRES 27 B 367 LEU SER GLN VAL ALA LEU ASP PRO PHE ASP PRO MET ALA SEQRES 28 B 367 ASN GLY PHE ALA LEU THR ASP VAL TRP GLY PRO LEU ALA SEQRES 29 B 367 GLY ASP ILE MODRES 4Q2H CSO A 255 CYS S-HYDROXYCYSTEINE MODRES 4Q2H CSO B 255 CYS S-HYDROXYCYSTEINE HET CSO A 255 14 HET CSO B 255 14 HET BCT A 401 4 HET GOL A 402 6 HET BCT B 401 4 HETNAM CSO S-HYDROXYCYSTEINE HETNAM BCT BICARBONATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CSO 2(C3 H7 N O3 S) FORMUL 3 BCT 2(C H O3 1-) FORMUL 4 GOL C3 H8 O3 FORMUL 6 HOH *679(H2 O) HELIX 1 1 THR A 33 ASP A 44 1 12 HELIX 2 2 ASP A 44 LEU A 56 1 13 HELIX 3 3 SER A 93 SER A 107 1 15 HELIX 4 4 GLY A 183 GLY A 186 5 4 HELIX 5 5 GLY A 190 ALA A 192 5 3 HELIX 6 6 ASN A 193 VAL A 212 1 20 HELIX 7 7 CSO A 255 ARG A 269 1 15 HELIX 8 8 LEU A 334 GLY A 339 1 6 HELIX 9 9 LEU A 341 ILE A 345 5 5 HELIX 10 10 THR B 33 ASP B 44 1 12 HELIX 11 11 ASP B 44 LEU B 56 1 13 HELIX 12 12 SER B 93 SER B 107 1 15 HELIX 13 13 GLY B 183 GLY B 186 5 4 HELIX 14 14 GLY B 190 ALA B 192 5 3 HELIX 15 15 ASN B 193 VAL B 212 1 20 HELIX 16 16 CSO B 255 ARG B 269 1 15 HELIX 17 17 LEU B 341 ILE B 345 5 5 LINK C PRO A 254 N ACSO A 255 1555 1555 1.33 LINK C PRO A 254 N BCSO A 255 1555 1555 1.33 LINK C ACSO A 255 N GLY A 256 1555 1555 1.33 LINK C BCSO A 255 N GLY A 256 1555 1555 1.33 LINK C PRO B 254 N ACSO B 255 1555 1555 1.34 LINK C PRO B 254 N BCSO B 255 1555 1555 1.34 LINK C ACSO B 255 N GLY B 256 1555 1555 1.33 LINK C BCSO B 255 N GLY B 256 1555 1555 1.33 CISPEP 1 GLU A 57 PRO A 58 0 2.03 CISPEP 2 GLU A 114 PRO A 115 0 13.45 CISPEP 3 TRP A 246 PRO A 247 0 6.84 CISPEP 4 GLU B 57 PRO B 58 0 1.54 CISPEP 5 GLU B 114 PRO B 115 0 5.69 CISPEP 6 TRP B 246 PRO B 247 0 6.31 SITE 1 AC1 10 SER A 93 GLY A 94 SER A 95 ASP A 251 SITE 2 AC1 10 CSO A 255 GLY A 256 THR A 257 HOH A 850 SITE 3 AC1 10 HOH A 851 HOH A 854 SITE 1 AC2 8 ILE A 233 GLY A 237 LEU A 266 PHE A 278 SITE 2 AC2 8 HOH A 535 HOH A 608 HOH A 733 HOH A 742 SITE 1 AC3 9 SER B 93 GLY B 94 SER B 95 ASP B 251 SITE 2 AC3 9 CSO B 255 GLY B 256 THR B 257 HOH B 818 SITE 3 AC3 9 HOH B 819 CRYST1 67.430 129.470 178.703 90.00 90.00 90.00 C 2 2 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014830 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007724 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005596 0.00000