HEADER VIRAL PROTEIN 13-APR-14 4Q46 TITLE THE SECOND STRUCTURE OF INFLUENZA B PB2 CAP-BINDING DOMAIN COMPLEX TITLE 2 WITH GDP COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE BASIC PROTEIN 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CAP-BINDING DOMAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA B VIRUS; SOURCE 3 ORGANISM_TAXID: 11520; SOURCE 4 STRAIN: B/JIANGXI/BV/2006; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS CAP BINDING, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.LIU,Y.YANG,X.ZHENG REVDAT 3 08-NOV-23 4Q46 1 REMARK REVDAT 2 25-DEC-19 4Q46 1 JRNL REVDAT 1 25-FEB-15 4Q46 0 JRNL AUTH Y.LIU,Y.YANG,J.FAN,R.HE,M.LUO,X.ZHENG JRNL TITL THE CRYSTAL STRUCTURE OF THE PB2 CAP-BINDING DOMAIN OF JRNL TITL 2 INFLUENZA B VIRUS REVEALS A NOVEL CAP RECOGNITION MECHANISM. JRNL REF J.BIOL.CHEM. V. 290 9141 2015 JRNL REFN ESSN 1083-351X JRNL PMID 25691568 JRNL DOI 10.1074/JBC.M115.636464 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.57 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 3 NUMBER OF REFLECTIONS : 31459 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1658 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.84 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2270 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.91 REMARK 3 BIN R VALUE (WORKING SET) : 0.2050 REMARK 3 BIN FREE R VALUE SET COUNT : 117 REMARK 3 BIN FREE R VALUE : 0.2700 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2660 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 381 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.128 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.135 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.074 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.280 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2768 ; 0.025 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3708 ; 2.170 ; 1.989 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 329 ; 6.722 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 140 ;36.647 ;23.714 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 551 ;15.533 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;23.532 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 387 ; 0.168 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2048 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1613 ; 1.445 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2584 ; 2.518 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1155 ; 3.891 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1122 ; 6.342 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4Q46 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 23-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000085581. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97917 REMARK 200 MONOCHROMATOR : CRYSTALLOGIC REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33162 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 24.570 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 8.500 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.50 REMARK 200 R MERGE FOR SHELL (I) : 0.21700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4ORO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.2M SODIUM FORMATE, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 44.27150 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 314 REMARK 465 SER A 315 REMARK 465 HIS A 316 REMARK 465 MET A 317 REMARK 465 GLY A 318 REMARK 465 LEU A 319 REMARK 465 LYS A 320 REMARK 465 GLY B 314 REMARK 465 SER B 315 REMARK 465 HIS B 316 REMARK 465 MET B 317 REMARK 465 GLY B 318 REMARK 465 LEU B 319 REMARK 465 LYS B 320 REMARK 465 ILE B 321 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 377 O HOH A 691 2.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 373 NE - CZ - NH1 ANGL. DEV. = 3.5 DEGREES REMARK 500 ARG A 373 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 443 53.24 -119.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ORO RELATED DB: PDB REMARK 900 RELATED ID: 4OR4 RELATED DB: PDB REMARK 900 RELATED ID: 4OR6 RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS SEQUENCE IS FROM INFLUENZA B VIRUS (B/JIANGXI/BV/2006) WHICH REMARK 999 WAS NOT SUBMITTED IN UNP AT THE TIME OF PROCESSING. N-TERMINAL GSHM REMARK 999 WERE FROM VECTOR SEQUENCE. DBREF 4Q46 A 314 484 PDB 4Q46 4Q46 314 484 DBREF 4Q46 B 314 484 PDB 4Q46 4Q46 314 484 SEQRES 1 A 171 GLY SER HIS MET GLY LEU LYS ILE ARG GLN ARG GLN ARG SEQRES 2 A 171 PHE GLY ARG LEU GLU LEU LYS ARG ILE SER GLY ARG GLY SEQRES 3 A 171 PHE LYS ASN ASP GLU GLU ILE LEU ILE GLY ASN GLY THR SEQRES 4 A 171 ILE GLN LYS ILE GLY ILE TRP ASP GLY GLU GLU GLU PHE SEQRES 5 A 171 HIS VAL ARG CYS GLY GLU CYS ARG GLY ILE LEU LYS LYS SEQRES 6 A 171 SER LYS MET LYS LEU GLU LYS LEU LEU ILE ASN SER ALA SEQRES 7 A 171 LYS LYS GLU ASP MET ARG ASP LEU ILE ILE LEU CYS MET SEQRES 8 A 171 VAL PHE SER GLN ASP THR ARG MET PHE GLN GLY VAL ARG SEQRES 9 A 171 GLY GLU ILE ASN PHE LEU ASN ARG ALA GLY GLN LEU LEU SEQRES 10 A 171 SER PRO MET TYR GLN LEU GLN ARG TYR PHE LEU ASN ARG SEQRES 11 A 171 SER SER ASP LEU PHE ASP GLN TRP GLY TYR GLU GLU SER SEQRES 12 A 171 PRO LYS ALA SER GLU LEU HIS GLY ILE ASN GLU SER MET SEQRES 13 A 171 ASN ALA SER ASP TYR THR LEU LYS GLY VAL VAL VAL THR SEQRES 14 A 171 LYS ASN SEQRES 1 B 171 GLY SER HIS MET GLY LEU LYS ILE ARG GLN ARG GLN ARG SEQRES 2 B 171 PHE GLY ARG LEU GLU LEU LYS ARG ILE SER GLY ARG GLY SEQRES 3 B 171 PHE LYS ASN ASP GLU GLU ILE LEU ILE GLY ASN GLY THR SEQRES 4 B 171 ILE GLN LYS ILE GLY ILE TRP ASP GLY GLU GLU GLU PHE SEQRES 5 B 171 HIS VAL ARG CYS GLY GLU CYS ARG GLY ILE LEU LYS LYS SEQRES 6 B 171 SER LYS MET LYS LEU GLU LYS LEU LEU ILE ASN SER ALA SEQRES 7 B 171 LYS LYS GLU ASP MET ARG ASP LEU ILE ILE LEU CYS MET SEQRES 8 B 171 VAL PHE SER GLN ASP THR ARG MET PHE GLN GLY VAL ARG SEQRES 9 B 171 GLY GLU ILE ASN PHE LEU ASN ARG ALA GLY GLN LEU LEU SEQRES 10 B 171 SER PRO MET TYR GLN LEU GLN ARG TYR PHE LEU ASN ARG SEQRES 11 B 171 SER SER ASP LEU PHE ASP GLN TRP GLY TYR GLU GLU SER SEQRES 12 B 171 PRO LYS ALA SER GLU LEU HIS GLY ILE ASN GLU SER MET SEQRES 13 B 171 ASN ALA SER ASP TYR THR LEU LYS GLY VAL VAL VAL THR SEQRES 14 B 171 LYS ASN HET GDP A 501 28 HET GDP B 501 28 HETNAM GDP GUANOSINE-5'-DIPHOSPHATE FORMUL 3 GDP 2(C10 H15 N5 O11 P2) FORMUL 5 HOH *381(H2 O) HELIX 1 1 LYS A 392 SER A 407 1 16 HELIX 2 2 ASP A 409 GLY A 415 1 7 HELIX 3 3 SER A 431 ARG A 443 1 13 HELIX 4 4 SER A 444 GLY A 452 1 9 HELIX 5 5 LYS B 392 GLN B 408 1 17 HELIX 6 6 ASP B 409 GLY B 415 1 7 HELIX 7 7 SER B 431 ARG B 443 1 13 HELIX 8 8 ARG B 443 GLY B 452 1 10 SHEET 1 A 8 ARG A 324 PHE A 327 0 SHEET 2 A 8 LEU A 330 GLY A 337 -1 O LEU A 332 N GLN A 325 SHEET 3 A 8 GLU A 363 CYS A 369 -1 O GLU A 364 N ILE A 335 SHEET 4 A 8 CYS A 372 SER A 379 -1 O LEU A 376 N PHE A 365 SHEET 5 A 8 LYS A 382 ILE A 388 -1 O LYS A 385 N LYS A 377 SHEET 6 A 8 VAL A 479 THR A 482 1 O THR A 482 N ILE A 388 SHEET 7 A 8 LEU A 462 ILE A 465 -1 N HIS A 463 O VAL A 481 SHEET 8 A 8 ALA A 471 SER A 472 -1 O SER A 472 N GLY A 464 SHEET 1 B 2 PHE A 340 LEU A 347 0 SHEET 2 B 2 ILE A 353 ASP A 360 -1 O GLN A 354 N ILE A 346 SHEET 1 C 2 TYR A 453 GLU A 455 0 SHEET 2 C 2 TYR A 474 LEU A 476 -1 O THR A 475 N GLU A 454 SHEET 1 D 8 GLN B 325 PHE B 327 0 SHEET 2 D 8 LEU B 330 GLY B 337 -1 O LEU B 330 N PHE B 327 SHEET 3 D 8 GLU B 363 CYS B 369 -1 O HIS B 366 N LYS B 333 SHEET 4 D 8 CYS B 372 SER B 379 -1 O CYS B 372 N CYS B 369 SHEET 5 D 8 LYS B 382 ASN B 389 -1 O LYS B 385 N LYS B 377 SHEET 6 D 8 VAL B 479 THR B 482 1 O THR B 482 N ILE B 388 SHEET 7 D 8 LEU B 462 ILE B 465 -1 N HIS B 463 O VAL B 481 SHEET 8 D 8 ALA B 471 SER B 472 -1 O SER B 472 N GLY B 464 SHEET 1 E 2 PHE B 340 LEU B 347 0 SHEET 2 E 2 ILE B 353 ASP B 360 -1 O GLN B 354 N ILE B 346 SHEET 1 F 2 TYR B 453 GLU B 455 0 SHEET 2 F 2 TYR B 474 LEU B 476 -1 O THR B 475 N GLU B 454 CISPEP 1 LYS B 483 ASN B 484 0 20.88 SITE 1 AC1 22 PHE A 327 ARG A 334 LYS A 341 TRP A 359 SITE 2 AC1 22 GLU A 363 LYS A 378 PHE A 406 SER A 431 SITE 3 AC1 22 MET A 433 HOH A 605 HOH A 608 HOH A 611 SITE 4 AC1 22 HOH A 616 HOH A 634 HOH A 643 HOH A 649 SITE 5 AC1 22 HOH A 694 HOH A 696 HOH A 700 ARG B 326 SITE 6 AC1 22 ARG B 368 GLY B 370 SITE 1 AC2 20 ARG A 326 ARG A 368 GLY A 370 PHE B 327 SITE 2 AC2 20 ARG B 334 LYS B 341 TRP B 359 GLU B 363 SITE 3 AC2 20 LYS B 378 PHE B 406 SER B 431 MET B 433 SITE 4 AC2 20 HOH B 607 HOH B 613 HOH B 616 HOH B 619 SITE 5 AC2 20 HOH B 626 HOH B 667 HOH B 698 HOH B 742 CRYST1 43.074 88.543 52.151 90.00 105.18 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023216 0.000000 0.006299 0.00000 SCALE2 0.000000 0.011294 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019868 0.00000