HEADER UNKNOWN FUNCTION, PROTEIN BINDING 16-APR-14 4Q5E TITLE SHIGELLA EFFECTOR KINASE OSPG BOUND TO E2-UB UBCH7-UB CONJUGATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN KINASE OSPG; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 26-193; COMPND 5 SYNONYM: EFFECTOR PROTEIN OSPG; COMPND 6 EC: 2.7.-.-; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: POLYUBIQUITIN; COMPND 10 CHAIN: B; COMPND 11 SYNONYM: UBIQUITIN; COMPND 12 EC: 6.3.2.19; COMPND 13 ENGINEERED: YES; COMPND 14 MUTATION: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: UBIQUITIN-CONJUGATING ENZYME E2 L3; COMPND 17 CHAIN: C; COMPND 18 SYNONYM: L-UBC, UBCH7, UBIQUITIN CARRIER PROTEIN L3, UBIQUITIN- COMPND 19 CONJUGATING ENZYME E2-F1, UBIQUITIN-PROTEIN LIGASE L3; COMPND 20 EC: 6.3.2.19; COMPND 21 ENGINEERED: YES; COMPND 22 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SHIGELLA SONNEI SS046; SOURCE 3 ORGANISM_TAXID: 300269; SOURCE 4 STRAIN: 2457T; SOURCE 5 GENE: OSPG, SSON_P170; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)STAR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 13 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 14 ORGANISM_TAXID: 559292; SOURCE 15 STRAIN: ATCC 204508 / S288C; SOURCE 16 GENE: SCD2, UBE2L3, UBI4, YLL039C; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 19 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 20 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 21 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 22 MOL_ID: 3; SOURCE 23 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 24 ORGANISM_COMMON: HUMAN; SOURCE 25 ORGANISM_TAXID: 9606; SOURCE 26 GENE: UBCE7, UBCH7, UBE2L3, UBI4; SOURCE 27 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 28 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 29 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 30 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 31 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS PROTEIN-PROTEIN COMPLEX, STRUCTURAL GENOMICS, MONTREAL-KINGSTON KEYWDS 2 BACTERIAL STRUCTURAL GENOMICS INITIATIVE, BSGI, KINASE FOLD, KEYWDS 3 INHIBITION OF NF-KB PATHWAY, UNKNOWN FUNCTION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.CYGLER,A.M.GRISHIN,MONTREAL-KINGSTON BACTERIAL STRUCTURAL GENOMICS AUTHOR 2 INITIATIVE (BSGI) REVDAT 3 22-NOV-17 4Q5E 1 REMARK REVDAT 2 09-JUL-14 4Q5E 1 DBREF SEQADV SEQRES REVDAT 1 02-JUL-14 4Q5E 0 JRNL AUTH A.M.GRISHIN,T.E.CONDOS,K.R.BARBER,F.X.CAMPBELL-VALOIS, JRNL AUTH 2 C.PARSOT,G.S.SHAW,M.CYGLER JRNL TITL STRUCTURAL BASIS FOR THE INHIBITION OF HOST PROTEIN JRNL TITL 2 UBIQUITINATION BY SHIGELLA EFFECTOR KINASE OSPG. JRNL REF STRUCTURE V. 22 878 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 24856362 JRNL DOI 10.1016/J.STR.2014.04.010 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 40691 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.185 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 2044 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.7711 - 4.6069 1.00 2762 147 0.1838 0.2368 REMARK 3 2 4.6069 - 3.6571 1.00 2642 141 0.1525 0.1912 REMARK 3 3 3.6571 - 3.1950 1.00 2630 115 0.1770 0.2236 REMARK 3 4 3.1950 - 2.9029 1.00 2609 129 0.1945 0.2205 REMARK 3 5 2.9029 - 2.6949 1.00 2574 134 0.2046 0.2823 REMARK 3 6 2.6949 - 2.5360 1.00 2599 136 0.1941 0.2430 REMARK 3 7 2.5360 - 2.4090 1.00 2542 145 0.1949 0.2521 REMARK 3 8 2.4090 - 2.3042 1.00 2577 136 0.1964 0.2547 REMARK 3 9 2.3042 - 2.2155 1.00 2565 128 0.1852 0.2294 REMARK 3 10 2.2155 - 2.1390 1.00 2558 148 0.2015 0.2256 REMARK 3 11 2.1390 - 2.0721 1.00 2549 147 0.2017 0.2391 REMARK 3 12 2.0721 - 2.0129 1.00 2572 123 0.2146 0.2341 REMARK 3 13 2.0129 - 1.9599 1.00 2495 159 0.2235 0.2972 REMARK 3 14 1.9599 - 1.9121 1.00 2548 141 0.2456 0.2896 REMARK 3 15 1.9121 - 1.8686 0.95 2425 115 0.2770 0.3179 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.400 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 36.84 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.09 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3326 REMARK 3 ANGLE : 1.465 4509 REMARK 3 CHIRALITY : 0.071 498 REMARK 3 PLANARITY : 0.007 592 REMARK 3 DIHEDRAL : 14.045 1290 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 26:193 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.6417 -54.9165 -2.6054 REMARK 3 T TENSOR REMARK 3 T11: 0.2279 T22: 0.2266 REMARK 3 T33: 0.2328 T12: 0.0329 REMARK 3 T13: 0.0095 T23: -0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.8694 L22: 2.6196 REMARK 3 L33: 2.3170 L12: 0.1351 REMARK 3 L13: -0.8735 L23: -1.1003 REMARK 3 S TENSOR REMARK 3 S11: -0.0601 S12: 0.0315 S13: -0.1242 REMARK 3 S21: 0.0372 S22: 0.0582 S23: -0.1128 REMARK 3 S31: 0.1589 S32: 0.0777 S33: -0.0079 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.0190 -34.1873 -16.4966 REMARK 3 T TENSOR REMARK 3 T11: 0.3529 T22: 0.3112 REMARK 3 T33: 0.4177 T12: -0.0090 REMARK 3 T13: 0.0799 T23: 0.1037 REMARK 3 L TENSOR REMARK 3 L11: 3.5316 L22: 4.0551 REMARK 3 L33: 6.0964 L12: 0.6206 REMARK 3 L13: 0.4754 L23: -0.3487 REMARK 3 S TENSOR REMARK 3 S11: 0.0064 S12: 0.4638 S13: 0.6557 REMARK 3 S21: 0.0398 S22: 0.1194 S23: -0.1301 REMARK 3 S31: -0.6030 S32: 0.0976 S33: -0.1646 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN C AND RESID 0:154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.5504 -30.7163 -5.6469 REMARK 3 T TENSOR REMARK 3 T11: 0.3514 T22: 0.3452 REMARK 3 T33: 0.2772 T12: 0.0456 REMARK 3 T13: -0.0388 T23: -0.0591 REMARK 3 L TENSOR REMARK 3 L11: 1.4169 L22: 5.0821 REMARK 3 L33: 4.2598 L12: -0.6584 REMARK 3 L13: 0.0062 L23: -2.1578 REMARK 3 S TENSOR REMARK 3 S11: 0.0028 S12: -0.1023 S13: 0.1814 REMARK 3 S21: 0.2770 S22: 0.0342 S23: 0.2436 REMARK 3 S31: -0.7400 S32: -0.2517 S33: -0.0232 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 201:324 ) OR ( CHAIN C AND RESID REMARK 3 201:289 ) OR ( CHAIN B AND RESID 101:124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.1926 -45.4460 -3.4114 REMARK 3 T TENSOR REMARK 3 T11: 0.3811 T22: 0.3782 REMARK 3 T33: 0.2961 T12: 0.0006 REMARK 3 T13: -0.0010 T23: 0.0078 REMARK 3 L TENSOR REMARK 3 L11: 0.5118 L22: 0.3805 REMARK 3 L33: 0.6543 L12: -0.4386 REMARK 3 L13: 0.1271 L23: -0.2623 REMARK 3 S TENSOR REMARK 3 S11: -0.0757 S12: -0.0738 S13: 0.0456 REMARK 3 S21: 0.0802 S22: 0.0435 S23: 0.0040 REMARK 3 S31: -0.0334 S32: -0.0857 S33: 0.0271 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Q5E COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000085625. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 77.2 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : DCM WITH CRYO-COOLED 1ST CRYSTAL REMARK 200 SAGITALLY BENT 2ND CRYSTAL REMARK 200 FOLLOWED BY VERTICALLY FOCUSING REMARK 200 MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 40758 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.10 REMARK 200 R MERGE FOR SHELL (I) : 0.95000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.60 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM HEPES 8.2, 15% PEG 4000, 100 MM REMARK 280 MGCL2, PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 33.65600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 42.68350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.07050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 42.68350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 33.65600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.07050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3370 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19790 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 23 REMARK 465 ASN A 24 REMARK 465 ALA A 25 REMARK 465 LYS A 194 REMARK 465 TYR A 195 REMARK 465 LEU A 196 REMARK 465 GLY C -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 72 CG CD NE CZ NH1 NH2 REMARK 470 HIS C 0 CG ND1 CD2 CE1 NE2 REMARK 470 LYS C 20 CG CD CE NZ REMARK 470 LYS C 150 CG CD CE NZ REMARK 470 VAL C 153 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU C 149 O HOH C 284 2.00 REMARK 500 NE2 GLN A 35 O HOH A 271 2.02 REMARK 500 OE1 GLN A 61 O HOH A 278 2.09 REMARK 500 OD1 ASP A 157 O HOH A 283 2.10 REMARK 500 OD2 ASP A 82 O HOH A 287 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 27 C - N - CA ANGL. DEV. = -9.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 138 48.40 -144.10 REMARK 500 ASN A 192 36.35 -88.97 REMARK 500 ALA B 46 70.48 33.85 REMARK 500 LYS C 20 -43.46 69.20 REMARK 500 ASP C 132 73.66 -156.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Q5H RELATED DB: PDB DBREF 4Q5E A 26 196 UNP Q3YTH2 OSPG_SHISS 26 196 DBREF 4Q5E B 1 76 UNP P0CG63 UBI4P_YEAST 1 76 DBREF 4Q5E C 1 154 UNP P68036 UB2L3_HUMAN 1 154 SEQADV 4Q5E SER A 23 UNP Q3YTH2 EXPRESSION TAG SEQADV 4Q5E ASN A 24 UNP Q3YTH2 EXPRESSION TAG SEQADV 4Q5E ALA A 25 UNP Q3YTH2 EXPRESSION TAG SEQADV 4Q5E ARG B 48 UNP P0CG63 LYS 48 ENGINEERED MUTATION SEQADV 4Q5E CYS B 76 UNP P0CG63 GLY 76 ENGINEERED MUTATION SEQADV 4Q5E GLY C -1 UNP P68036 EXPRESSION TAG SEQADV 4Q5E HIS C 0 UNP P68036 EXPRESSION TAG SEQADV 4Q5E SER C 17 UNP P68036 CYS 17 ENGINEERED MUTATION SEQADV 4Q5E SER C 137 UNP P68036 CYS 137 ENGINEERED MUTATION SEQRES 1 A 174 SER ASN ALA GLU PRO ILE LEU GLY LYS LEU ILE GLY GLN SEQRES 2 A 174 GLY SER THR ALA GLU ILE PHE GLU ASP VAL ASN ASP SER SEQRES 3 A 174 SER ALA LEU TYR LYS LYS TYR ASP LEU ILE GLY ASN GLN SEQRES 4 A 174 TYR ASN GLU ILE LEU GLU MET ALA TRP GLN GLU SER GLU SEQRES 5 A 174 LEU PHE ASN ALA PHE TYR GLY ASP GLU ALA SER VAL VAL SEQRES 6 A 174 ILE GLN TYR GLY GLY ASP VAL TYR LEU ARG MET LEU ARG SEQRES 7 A 174 VAL PRO GLY THR PRO LEU SER ASP ILE ASP THR ALA ASP SEQRES 8 A 174 ILE PRO ASP ASN ILE GLU SER LEU TYR LEU GLN LEU ILE SEQRES 9 A 174 CYS LYS LEU ASN GLU LEU SER ILE ILE HIS TYR ASP LEU SEQRES 10 A 174 ASN THR GLY ASN MET LEU TYR ASP LYS GLU SER GLU SER SEQRES 11 A 174 LEU PHE PRO ILE ASP PHE ARG ASN ILE TYR ALA GLU TYR SEQRES 12 A 174 TYR ALA ALA THR LYS LYS ASP LYS GLU ILE ILE ASP ARG SEQRES 13 A 174 ARG LEU GLN MET ARG THR ASN ASP PHE TYR SER LEU LEU SEQRES 14 A 174 ASN ARG LYS TYR LEU SEQRES 1 B 76 MET GLN ILE PHE VAL LYS THR LEU THR GLY LYS THR ILE SEQRES 2 B 76 THR LEU GLU VAL GLU SER SER ASP THR ILE ASP ASN VAL SEQRES 3 B 76 LYS SER LYS ILE GLN ASP LYS GLU GLY ILE PRO PRO ASP SEQRES 4 B 76 GLN GLN ARG LEU ILE PHE ALA GLY ARG GLN LEU GLU ASP SEQRES 5 B 76 GLY ARG THR LEU SER ASP TYR ASN ILE GLN LYS GLU SER SEQRES 6 B 76 THR LEU HIS LEU VAL LEU ARG LEU ARG GLY CYS SEQRES 1 C 156 GLY HIS MET ALA ALA SER ARG ARG LEU MET LYS GLU LEU SEQRES 2 C 156 GLU GLU ILE ARG LYS SER GLY MET LYS ASN PHE ARG ASN SEQRES 3 C 156 ILE GLN VAL ASP GLU ALA ASN LEU LEU THR TRP GLN GLY SEQRES 4 C 156 LEU ILE VAL PRO ASP ASN PRO PRO TYR ASP LYS GLY ALA SEQRES 5 C 156 PHE ARG ILE GLU ILE ASN PHE PRO ALA GLU TYR PRO PHE SEQRES 6 C 156 LYS PRO PRO LYS ILE THR PHE LYS THR LYS ILE TYR HIS SEQRES 7 C 156 PRO ASN ILE ASP GLU LYS GLY GLN VAL CYS LEU PRO VAL SEQRES 8 C 156 ILE SER ALA GLU ASN TRP LYS PRO ALA THR LYS THR ASP SEQRES 9 C 156 GLN VAL ILE GLN SER LEU ILE ALA LEU VAL ASN ASP PRO SEQRES 10 C 156 GLN PRO GLU HIS PRO LEU ARG ALA ASP LEU ALA GLU GLU SEQRES 11 C 156 TYR SER LYS ASP ARG LYS LYS PHE SER LYS ASN ALA GLU SEQRES 12 C 156 GLU PHE THR LYS LYS TYR GLY GLU LYS ARG PRO VAL ASP FORMUL 4 HOH *237(H2 O) HELIX 1 1 GLN A 61 GLY A 81 1 21 HELIX 2 2 SER A 107 ILE A 109 5 3 HELIX 3 3 ASP A 110 ILE A 114 5 5 HELIX 4 4 ASN A 117 LEU A 132 1 16 HELIX 5 5 ASN A 140 GLY A 142 5 3 HELIX 6 6 ILE A 161 ALA A 168 1 8 HELIX 7 7 THR A 169 ASN A 192 1 24 HELIX 8 8 THR B 22 GLY B 35 1 14 HELIX 9 9 LEU B 56 ASN B 60 5 5 HELIX 10 10 MET C 1 GLY C 18 1 18 HELIX 11 11 LEU C 87 SER C 91 5 5 HELIX 12 12 LYS C 100 ASP C 114 1 15 HELIX 13 13 ARG C 122 ASP C 132 1 11 HELIX 14 14 ASP C 132 GLY C 148 1 17 SHEET 1 A 5 LEU A 29 GLN A 35 0 SHEET 2 A 5 ALA A 39 ASP A 44 -1 O GLU A 43 N GLY A 30 SHEET 3 A 5 ASP A 47 TYR A 55 -1 O LYS A 54 N GLU A 40 SHEET 4 A 5 ASP A 93 LEU A 99 -1 O LEU A 96 N LYS A 53 SHEET 5 A 5 SER A 85 TYR A 90 -1 N VAL A 86 O ARG A 97 SHEET 1 B 3 THR A 104 PRO A 105 0 SHEET 2 B 3 MET A 144 ASP A 147 -1 O TYR A 146 N THR A 104 SHEET 3 B 3 SER A 152 PRO A 155 -1 O SER A 152 N ASP A 147 SHEET 1 C 5 THR B 12 GLU B 16 0 SHEET 2 C 5 GLN B 2 LYS B 6 -1 N VAL B 5 O ILE B 13 SHEET 3 C 5 THR B 66 LEU B 71 1 O LEU B 67 N LYS B 6 SHEET 4 C 5 GLN B 41 PHE B 45 -1 N ILE B 44 O HIS B 68 SHEET 5 C 5 ARG B 48 GLN B 49 -1 O ARG B 48 N PHE B 45 SHEET 1 D 4 PHE C 22 VAL C 27 0 SHEET 2 D 4 THR C 34 ILE C 39 -1 O GLN C 36 N GLN C 26 SHEET 3 D 4 PHE C 51 ASN C 56 -1 O ILE C 55 N TRP C 35 SHEET 4 D 4 LYS C 67 PHE C 70 -1 O LYS C 67 N ASN C 56 SSBOND 1 CYS B 76 CYS C 86 1555 1555 2.03 CISPEP 1 PRO C 44 PRO C 45 0 9.41 CISPEP 2 TYR C 61 PRO C 62 0 4.76 CRYST1 67.312 84.141 85.367 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014856 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011885 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011714 0.00000