HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 17-APR-14 4Q5K TITLE CRYSTAL STRUCTURE OF A N-ACETYLMURAMOYL-L-ALANINE AMIDASE TITLE 2 (BACUNI_02947) FROM BACTEROIDES UNIFORMIS ATCC 8492 AT 1.30 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 24-262; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES UNIFORMIS; SOURCE 3 ORGANISM_TAXID: 411479; SOURCE 4 ATCC: 8492; SOURCE 5 GENE: BACUNI_02947; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF07313 FAMILY PROTEIN, DUF 1460, STRUCTURAL GENOMICS, JOINT CENTER KEYWDS 2 FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 7 06-DEC-23 4Q5K 1 REMARK REVDAT 6 20-SEP-23 4Q5K 1 REMARK REVDAT 5 01-FEB-23 4Q5K 1 REMARK SEQADV LINK REVDAT 4 18-SEP-19 4Q5K 1 JRNL LINK REVDAT 3 22-NOV-17 4Q5K 1 REMARK REVDAT 2 24-DEC-14 4Q5K 1 TITLE REVDAT 1 21-MAY-14 4Q5K 0 JRNL AUTH Q.XU,D.MENGIN-LECREULX,D.PATIN,J.C.GRANT,H.J.CHIU, JRNL AUTH 2 L.JAROSZEWSKI,M.W.KNUTH,A.GODZIK,S.A.LESLEY,M.A.ELSLIGER, JRNL AUTH 3 A.M.DEACON,I.A.WILSON JRNL TITL STRUCTURE-GUIDED FUNCTIONAL CHARACTERIZATION OF DUF1460 JRNL TITL 2 REVEALS A HIGHLY SPECIFIC NLPC/P60 AMIDASE FAMILY. JRNL REF STRUCTURE V. 22 1799 2014 JRNL REFN ISSN 0969-2126 JRNL PMID 25465128 JRNL DOI 10.1016/J.STR.2014.09.018 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0069 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.06 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 60203 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.117 REMARK 3 R VALUE (WORKING SET) : 0.116 REMARK 3 FREE R VALUE : 0.149 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 2940 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.33 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4194 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.89 REMARK 3 BIN R VALUE (WORKING SET) : 0.2130 REMARK 3 BIN FREE R VALUE SET COUNT : 217 REMARK 3 BIN FREE R VALUE : 0.2390 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1839 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 455 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.67 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.78 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.041 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.041 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.026 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.382 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.982 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.974 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2061 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 2028 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2826 ; 1.372 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4730 ; 0.771 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 280 ; 5.854 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;33.285 ;25.357 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 394 ;11.483 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;15.576 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 328 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2317 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 420 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 996 ; 1.648 ; 1.309 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 995 ; 1.576 ; 1.306 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1256 ; 2.280 ; 1.973 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4089 ; 1.964 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 259 ;26.120 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 4236 ; 8.883 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2. HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. 3. N-ACETYL-GLUCOSAMINE-1,6-ANHYDRO-N-ACETYLMURAMIC REMARK 3 ACID (GML) MODELED WAS PRESENT IN CRYSTALLIZATION CONDITION. 4. REMARK 3 DENSITIES FOR THE LOOP 79-83 ARE WEAK. 5. CRYTALS WERE OBTAINED REMARK 3 BY COCROSTALLIZATION IN PRESENCE OF 0.93 MILLIMOLAR GLCNAC-1,6- REMARK 3 ANHYDRO-MURNAC. REMARK 4 REMARK 4 4Q5K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-APR-14. REMARK 100 THE DEPOSITION ID IS D_1000085631. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : VERTICAL FOCUSING MIRROR; DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 325 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 60273 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.061 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.990 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.4100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.35 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.94 REMARK 200 R MERGE FOR SHELL (I) : 0.55800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.540 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4H4J REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 29% POLYETHYLENE GLYCOL 4000, 0.1MM REMARK 280 TRIS PH8.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.73550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 40.06100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.46500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 40.06100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.73550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.46500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLN A 24 REMARK 465 GLY A 25 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 27 CG CD CE NZ REMARK 470 LYS A 78 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 38 -5.27 76.94 REMARK 500 ASP A 83 -157.05 62.44 REMARK 500 ASP A 104 75.59 -152.61 REMARK 500 SER A 143 6.83 -163.05 REMARK 500 ASN A 157 45.62 -145.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 203 O REMARK 620 2 THR A 205 O 107.6 REMARK 620 3 LEU A 208 O 90.8 86.3 REMARK 620 4 HOH A 473 O 165.4 86.7 93.1 REMARK 620 5 HOH A 487 O 83.3 166.5 85.5 83.0 REMARK 620 6 HOH A 521 O 91.4 100.0 172.4 83.1 87.5 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2YP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-417815 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT (24-262) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4Q5K A 24 262 UNP A7V5T8 A7V5T8_BACUN 24 262 SEQADV 4Q5K GLY A 0 UNP A7V5T8 EXPRESSION TAG SEQRES 1 A 240 GLY GLN GLY GLY LYS ASP MSE LEU SER ASN GLY ILE LYS SEQRES 2 A 240 TYR LEU ASP VAL PRO TYR VAL ALA HIS THR LEU GLU ALA SEQRES 3 A 240 ASP GLY PRO GLU GLU LEU VAL ILE ASN CYS ASP GLU VAL SEQRES 4 A 240 ASP CYS THR THR LEU VAL GLU TYR VAL LEU ALA GLU THR SEQRES 5 A 240 LEU THR PRO LYS LEU ALA ASP GLY ASP ILE SER GLU SER SEQRES 6 A 240 ALA PHE ALA ASP ASN LEU GLN LYS ILE ARG TYR ARG ASP SEQRES 7 A 240 GLY LYS ILE ASP GLY TYR THR SER ARG LEU HIS TYR ILE SEQRES 8 A 240 ALA ASP TRP ILE ASN ASN GLY VAL ARG ASN GLY PHE LEU SEQRES 9 A 240 GLN ASP VAL THR GLY ALA MSE SER PRO ASP THR GLU ARG SEQRES 10 A 240 LEU SER ILE SER TYR MSE SER SER HIS PRO GLN LEU TYR SEQRES 11 A 240 LYS GLN LEU ALA ASN SER PRO GLU ASN VAL ALA LYS MSE SEQRES 12 A 240 LYS LYS ILE GLU GLN SER LEU SER GLY LYS GLU VAL HIS SEQRES 13 A 240 TYR LEU PRO LYS ALA LYS LEU PRO ALA ASP GLY LEU PRO SEQRES 14 A 240 TRP ILE LYS ASP GLY ASP ILE ILE ALA ILE THR THR ASN SEQRES 15 A 240 THR PRO GLY LEU ASP VAL ALA HIS MSE GLY ILE ALA PHE SEQRES 16 A 240 TYR ALA ASP ASN LYS LEU LEU LEU VAL HIS ALA SER SER SEQRES 17 A 240 THR ASP LYS LYS VAL VAL VAL SER LYS VAL PRO LEU SER SEQRES 18 A 240 GLN MSE LEU LYS ASP ASN ASN LYS TRP THR GLY ILE ARG SEQRES 19 A 240 VAL LEU ARG MSE LYS LYS MODRES 4Q5K MSE A 29 MET SELENOMETHIONINE MODRES 4Q5K MSE A 133 MET SELENOMETHIONINE MODRES 4Q5K MSE A 145 MET SELENOMETHIONINE MODRES 4Q5K MSE A 165 MET SELENOMETHIONINE MODRES 4Q5K MSE A 213 MET SELENOMETHIONINE MODRES 4Q5K MSE A 245 MET SELENOMETHIONINE MODRES 4Q5K MSE A 260 MET SELENOMETHIONINE HET MSE A 29 8 HET MSE A 133 18 HET MSE A 145 8 HET MSE A 165 13 HET MSE A 213 8 HET MSE A 245 8 HET MSE A 260 13 HET 2YP A 301 33 HET NA A 302 1 HETNAM MSE SELENOMETHIONINE HETNAM 2YP (2R)-2-[[(1R,2S,3R,4R,5R)-4-ACETAMIDO-2-[(2S,3R,4R,5S, HETNAM 2 2YP 6R)-3-ACETAMIDO-6-(HYDROXYMETHYL)-4,5-BIS(OXIDANYL) HETNAM 3 2YP OXAN-2-YL]OXY-6,8-DIOXABICYCLO[3.2.1]OCTAN-3- HETNAM 4 2YP YL]OXY]PROPANOIC ACID HETNAM NA SODIUM ION FORMUL 1 MSE 7(C5 H11 N O2 SE) FORMUL 2 2YP C19 H30 N2 O12 FORMUL 3 NA NA 1+ FORMUL 4 HOH *455(H2 O) HELIX 1 1 ASP A 28 LYS A 35 1 8 HELIX 2 2 ASP A 62 THR A 76 1 15 HELIX 3 3 SER A 85 TYR A 98 1 14 HELIX 4 4 ARG A 99 LYS A 102 5 4 HELIX 5 5 GLY A 105 ARG A 109 5 5 HELIX 6 6 TYR A 112 ASN A 123 1 12 HELIX 7 7 VAL A 129 SER A 134 1 6 HELIX 8 8 SER A 143 HIS A 148 1 6 HELIX 9 9 PRO A 149 LEU A 151 5 3 HELIX 10 10 TYR A 152 ASN A 157 1 6 HELIX 11 11 SER A 158 SER A 173 1 16 HELIX 12 12 ALA A 183 LEU A 185 5 3 HELIX 13 13 PRO A 241 ASN A 249 1 9 SHEET 1 A 3 LEU A 126 ASP A 128 0 SHEET 2 A 3 TRP A 252 MSE A 260 -1 O ARG A 259 N GLN A 127 SHEET 3 A 3 LEU A 180 PRO A 181 -1 N LEU A 180 O ILE A 255 SHEET 1 B 6 LEU A 126 ASP A 128 0 SHEET 2 B 6 TRP A 252 MSE A 260 -1 O ARG A 259 N GLN A 127 SHEET 3 B 6 ILE A 198 THR A 203 -1 N ILE A 198 O LEU A 258 SHEET 4 B 6 VAL A 210 ALA A 219 -1 O GLY A 214 N ILE A 199 SHEET 5 B 6 LYS A 222 SER A 229 -1 O LEU A 224 N PHE A 217 SHEET 6 B 6 LYS A 234 VAL A 237 -1 O VAL A 236 N HIS A 227 SHEET 1 C 2 THR A 137 ARG A 139 0 SHEET 2 C 2 GLU A 176 HIS A 178 -1 O VAL A 177 N GLU A 138 LINK C ASP A 28 N MSE A 29 1555 1555 1.31 LINK C MSE A 29 N LEU A 30 1555 1555 1.33 LINK C ALA A 132 N MSE A 133 1555 1555 1.34 LINK C MSE A 133 N SER A 134 1555 1555 1.33 LINK C TYR A 144 N MSE A 145 1555 1555 1.33 LINK C MSE A 145 N SER A 146 1555 1555 1.32 LINK C LYS A 164 N MSE A 165 1555 1555 1.32 LINK C MSE A 165 N LYS A 166 1555 1555 1.33 LINK C HIS A 212 N MSE A 213 1555 1555 1.32 LINK C MSE A 213 N GLY A 214 1555 1555 1.33 LINK C GLN A 244 N MSE A 245 1555 1555 1.34 LINK C MSE A 245 N LEU A 246 1555 1555 1.32 LINK C ARG A 259 N MSE A 260 1555 1555 1.33 LINK C MSE A 260 N LYS A 261 1555 1555 1.33 LINK O THR A 203 NA NA A 302 1555 1555 2.57 LINK O THR A 205 NA NA A 302 1555 1555 2.55 LINK O LEU A 208 NA NA A 302 1555 1555 2.29 LINK NA NA A 302 O HOH A 473 1555 1555 2.51 LINK NA NA A 302 O HOH A 487 1555 1555 2.46 LINK NA NA A 302 O HOH A 521 1555 1555 2.38 SITE 1 AC1 23 TYR A 41 ASP A 62 CYS A 63 THR A 64 SITE 2 AC1 23 ARG A 109 HIS A 111 TYR A 144 TYR A 152 SITE 3 AC1 23 LEU A 208 VAL A 210 ALA A 211 HIS A 212 SITE 4 AC1 23 HOH A 401 HOH A 439 HOH A 442 HOH A 497 SITE 5 AC1 23 HOH A 534 HOH A 606 HOH A 660 HOH A 734 SITE 6 AC1 23 HOH A 808 HOH A 829 HOH A 850 SITE 1 AC2 6 THR A 203 THR A 205 LEU A 208 HOH A 473 SITE 2 AC2 6 HOH A 487 HOH A 521 CRYST1 49.471 60.930 80.122 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020214 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016412 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012481 0.00000