HEADER    HYDROLASE/HYDROLASE INHIBITOR           04-MAY-14   4QAG              
TITLE     STRUCTURE OF A DIHYDROXYCOUMARIN ACTIVE-SITE INHIBITOR IN COMPLEX WITH
TITLE    2 THE RNASE H DOMAIN OF HIV-1 REVERSE TRANSCRIPTASE                    
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: REVERSE TRANSCRIPTASE/RIBONUCLEASE H;                      
COMPND   3 CHAIN: A, B;                                                         
COMPND   4 FRAGMENT: UNP RESIDUES 1024-1156;                                    
COMPND   5 SYNONYM: EXORIBONUCLEASE H, P66 RT;                                  
COMPND   6 EC: 2.7.7.49, 2.7.7.7, 3.1.26.13, 3.1.13.2;                          
COMPND   7 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1;            
SOURCE   3 ORGANISM_COMMON: HIV-1;                                              
SOURCE   4 ORGANISM_TAXID: 11678;                                               
SOURCE   5 GENE: GAG-POL;                                                       
SOURCE   6 EXPRESSION_SYSTEM: ESCHERICHIA COLI;                                 
SOURCE   7 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;                              
SOURCE  10 EXPRESSION_SYSTEM_PLASMID: PLYSS                                     
KEYWDS    RNASE H INHIBITOR, STRUCTURE-BASED DRUG DESIGN, ACTIVE SITE,          
KEYWDS   2 TRANSFERASE, DIHYDROXYCOUMARIN ANALOGS, DIHYDROXY-BENZOPYRONE        
KEYWDS   3 DERIVATIVES, DIVALENT CATION CHELATOR, AIDS, REVERSE TRANSCRIPTASE,  
KEYWDS   4 PROTEIN-INHIBITOR COMPLEX, HYDROLASE-HYDROLASE INHIBITOR COMPLEX     
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    D.M.HIMMEL,W.C.HO,E.ARNOLD                                            
REVDAT   4   20-SEP-23 4QAG    1       REMARK LINK                              
REVDAT   3   09-JUL-14 4QAG    1       JRNL                                     
REVDAT   2   25-JUN-14 4QAG    1       JRNL                                     
REVDAT   1   04-JUN-14 4QAG    0                                                
SPRSDE     04-JUN-14 4QAG      4JE2                                             
JRNL        AUTH   D.M.HIMMEL,N.S.MYSHAKINA,T.ILINA,A.VAN RY,W.C.HO,            
JRNL        AUTH 2 M.A.PARNIAK,E.ARNOLD                                         
JRNL        TITL   STRUCTURE OF A DIHYDROXYCOUMARIN ACTIVE-SITE INHIBITOR IN    
JRNL        TITL 2 COMPLEX WITH THE RNASE H DOMAIN OF HIV-1 REVERSE             
JRNL        TITL 3 TRANSCRIPTASE AND STRUCTURE-ACTIVITY ANALYSIS OF INHIBITOR   
JRNL        TITL 4 ANALOGS.                                                     
JRNL        REF    J.MOL.BIOL.                   V. 426  2617 2014              
JRNL        REFN                   ISSN 0022-2836                               
JRNL        PMID   24840303                                                     
JRNL        DOI    10.1016/J.JMB.2014.05.006                                    
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   D.M.HIMMEL,K.A.MAEGLEY,T.A.PAULY,J.D.BAUMAN,K.DAS,C.DHARIA,  
REMARK   1  AUTH 2 A.D.CLARK JR.,K.RYAN,M.J.HICKEY,R.A.LOVE,S.H.HUGHES,         
REMARK   1  AUTH 3 S.BERGQVIST,E.ARNOLD                                         
REMARK   1  TITL   STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE WITH THE INHIBITOR  
REMARK   1  TITL 2 BETA-THUJAPLICINOL BOUND AT THE RNASE H ACTIVE SITE          
REMARK   1  REF    STRUCTURE                     V.  17  1625 2009              
REMARK   1  REFN                   ISSN 0969-2126                               
REMARK   1 REFERENCE 2                                                          
REMARK   1  AUTH   S.CHUNG,D.M.HIMMEL,J.JIANG,K.WOJTAK,J.D.BAUMAN,J.W.RAUSCH,   
REMARK   1  AUTH 2 J.A.WILSON,J.A.BEUTLER,C.J.THOMAS,E.ARNOLD,S.F.J.LE GRICE    
REMARK   1  TITL   SYNTHESIS, ACTIVITY, AND STRUCTURAL ANALYSIS OF NOVEL        
REMARK   1  TITL 2 ALPHA-HYDROXYTROPOLONE INHIBITORS OF HUMAN IMMUNODEFICIENCY  
REMARK   1  TITL 3 VIRUS REVERSE TRANSCRIPTASE-ASSOCIATED RIBONUCLEASE H        
REMARK   1  REF    J.MED.CHEM.                   V.  54  4462 2011              
REMARK   1  REFN                   ISSN 0022-2623                               
REMARK   1 REFERENCE 3                                                          
REMARK   1  AUTH   K.DAS,J.D.BAUMAN,A.D.CLARK JR.,Y.V.FRENKEL,P.J.LEWI,         
REMARK   1  AUTH 2 A.J.SHATKIN,S.H.HUGHES,E.ARNOLD                              
REMARK   1  TITL   HIGH-RESOLUTION STRUCTURES OF HIV-1 REVERSE                  
REMARK   1  TITL 2 TRANSCRIPTASE/TMC278 COMPLEXES: STRATEGIC FLEXIBILITY        
REMARK   1  TITL 3 EXPLAINS POTENCY AGAINST RESISTANCE MUTATIONS                
REMARK   1  REF    PROC.NATL.ACAD.SCI.USA        V. 105  1466 2008              
REMARK   1  REFN                   ISSN 0027-8424                               
REMARK   1 REFERENCE 4                                                          
REMARK   1  AUTH   D.M.HIMMEL,S.G.SARAFIANOS,S.DHARMASENA,M.M.HOSSAIN,          
REMARK   1  AUTH 2 K.MCCOY-SIMANDLE,T.ILINA,A.D.CLARK JR.,J.L.KNIGHT,           
REMARK   1  AUTH 3 J.G.JULIAS,P.K.CLARK,K.KROGH-JESPERSEN,R.M.LEVY,S.H.HUGHES,  
REMARK   1  AUTH 4 M.A.PARNIAK,E.ARNOLD                                         
REMARK   1  TITL   HIV-1 REVERSE TRANSCRIPTASE STRUCTURE WITH RNASE H INHIBITOR 
REMARK   1  TITL 2 DIHYDROXY BENZOYL NAPHTHYL HYDRAZONE BOUND AT A NOVEL SITE   
REMARK   1  REF    ACS CHEM.BIOL.                V.   1   702 2006              
REMARK   1  REFN                   ISSN 1554-8929                               
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.71 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : PHENIX 1.8_1066                                      
REMARK   3   AUTHORS     : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN            
REMARK   3               : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE,           
REMARK   3               : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER,            
REMARK   3               : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY,              
REMARK   3               : REETAL PAI,RANDY READ,JANE RICHARDSON,               
REMARK   3               : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI,           
REMARK   3               : NICHOLAS SAUTER,JACOB SMITH,LAURENT                  
REMARK   3               : STORONI,TOM TERWILLIGER,PETER ZWART                  
REMARK   3                                                                      
REMARK   3    REFINEMENT TARGET : ENGH & HUBER                                  
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.71                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 28.57                          
REMARK   3   MIN(FOBS/SIGMA_FOBS)              : 0.000                          
REMARK   3   COMPLETENESS FOR RANGE        (%) : 98.3                           
REMARK   3   NUMBER OF REFLECTIONS             : 34739                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   R VALUE     (WORKING + TEST SET) : 0.183                           
REMARK   3   R VALUE            (WORKING SET) : 0.182                           
REMARK   3   FREE R VALUE                     : 0.190                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 2.720                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 946                             
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT (IN BINS).                           
REMARK   3   BIN  RESOLUTION RANGE  COMPL.    NWORK NFREE   RWORK  RFREE        
REMARK   3     1 28.5691 -  3.2734    1.00     4893   150  0.1629 0.1703        
REMARK   3     2  3.2734 -  2.5988    1.00     4920   125  0.1936 0.1907        
REMARK   3     3  2.5988 -  2.2704    1.00     4898   125  0.1784 0.2032        
REMARK   3     4  2.2704 -  2.0629    1.00     4899   134  0.1731 0.1822        
REMARK   3     5  2.0629 -  1.9151    0.99     4910   144  0.2055 0.2133        
REMARK   3     6  1.9151 -  1.8022    0.99     4831   146  0.2731 0.2847        
REMARK   3     7  1.8022 -  1.7120    0.91     4442   122  0.3710 0.4403        
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELLING.                                             
REMARK   3   METHOD USED        : FLAT BULK SOLVENT MODEL                       
REMARK   3   SOLVENT RADIUS     : 1.11                                          
REMARK   3   SHRINKAGE RADIUS   : 0.90                                          
REMARK   3   K_SOL              : NULL                                          
REMARK   3   B_SOL              : NULL                                          
REMARK   3                                                                      
REMARK   3  ERROR ESTIMATES.                                                    
REMARK   3   COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED)     : 0.230            
REMARK   3   PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.880           
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : 34.34                          
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 56.69                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : NULL                                                 
REMARK   3    B22 (A**2) : NULL                                                 
REMARK   3    B33 (A**2) : NULL                                                 
REMARK   3    B12 (A**2) : NULL                                                 
REMARK   3    B13 (A**2) : NULL                                                 
REMARK   3    B23 (A**2) : NULL                                                 
REMARK   3                                                                      
REMARK   3  TWINNING INFORMATION.                                               
REMARK   3   FRACTION: NULL                                                     
REMARK   3   OPERATOR: NULL                                                     
REMARK   3                                                                      
REMARK   3  DEVIATIONS FROM IDEAL VALUES.                                       
REMARK   3                 RMSD          COUNT                                  
REMARK   3   BOND      :  0.008           2158                                  
REMARK   3   ANGLE     :  0.942           2930                                  
REMARK   3   CHIRALITY :  0.055            330                                  
REMARK   3   PLANARITY :  0.003            372                                  
REMARK   3   DIHEDRAL  : 15.122            798                                  
REMARK   3                                                                      
REMARK   3  TLS DETAILS                                                         
REMARK   3   NUMBER OF TLS GROUPS  : NULL                                       
REMARK   3                                                                      
REMARK   3  NCS DETAILS                                                         
REMARK   3   NUMBER OF NCS GROUPS : NULL                                        
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 4QAG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-MAY-14.                  
REMARK 100 THE DEPOSITION ID IS D_1000085807.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 03-JUN-10                          
REMARK 200  TEMPERATURE           (KELVIN) : 100.0                              
REMARK 200  PH                             : 8.2                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : NSLS                               
REMARK 200  BEAMLINE                       : X25                                
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 1.10                               
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC QUANTUM 315                   
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : DENZO                              
REMARK 200  DATA SCALING SOFTWARE          : SCALEPACK                          
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 34856                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.710                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 40.000                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : -0.400                             
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 98.5                               
REMARK 200  DATA REDUNDANCY                : 7.800                              
REMARK 200  R MERGE                    (I) : 0.08800                            
REMARK 200  R SYM                      (I) : 0.08800                            
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 27.1000                            
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.71                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.77                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 89.5                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.90                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.45100                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 2.400                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: PHASER 2.1.4                                          
REMARK 200 STARTING MODEL: PDB ENTRY 3IG1                                       
REMARK 200                                                                      
REMARK 200 REMARK: NULL                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 57.27                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.88                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BICINE PH 8.2, 10 MM MANGANESE    
REMARK 280  SULFATE, 1 MM SODIUM AZIDE, 9% PEG 3350, COMBINED WITH EQUAL        
REMARK 280  VOLUME OF 10 MM TRIS PH 8.0, 75 MM NACL, 20 MG/ML (1.34 MM)         
REMARK 280  RNASE H, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K            
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31                             
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -Y,X-Y,Z+1/3                                            
REMARK 290       3555   -X+Y,-X,Z+2/3                                           
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -0.500000 -0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       37.36667            
REMARK 290   SMTRY1   3 -0.500000  0.866025  0.000000        0.00000            
REMARK 290   SMTRY2   3 -0.866025 -0.500000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000  1.000000       74.73333            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1, 2, 3                                                 
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 2                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 3                                                       
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC                    
REMARK 350 SOFTWARE USED: PISA                                                  
REMARK 350 TOTAL BURIED SURFACE AREA: 1690 ANGSTROM**2                          
REMARK 350 SURFACE AREA OF THE COMPLEX: 13860 ANGSTROM**2                       
REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -21.0 KCAL/MOL                        
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B                                  
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS                                         
REMARK 500                                                                      
REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH          
REMARK 500 CIS AND TRANS CONFORMATION.  CIS BONDS, IF ANY, ARE LISTED           
REMARK 500 ON CISPEP RECORDS.  TRANS IS DEFINED AS 180 +/- 30 AND               
REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES.                                  
REMARK 500                                 MODEL     OMEGA                      
REMARK 500 TRP A  426     TYR A  427                  104.28                    
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 620                                                                      
REMARK 620 METAL COORDINATION                                                   
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):                             
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 601  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 443   OD1                                                    
REMARK 620 2 ASP A 549   OD1  97.5                                              
REMARK 620 3 F95 A 603   O1  100.7 161.8                                        
REMARK 620 4 F95 A 603   O2  177.2  81.8  80.1                                  
REMARK 620 5 HOH A 711   O    89.9  91.9  87.7  92.8                            
REMARK 620 6 HOH A 712   O    90.1  91.2  89.3  87.2 176.9                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN A 602  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP A 443   OD2                                                    
REMARK 620 2 GLU A 478   OE2  94.5                                              
REMARK 620 3 ASP A 498   OD1 116.8 103.3                                        
REMARK 620 4 ASP A 498   OD2  84.9 157.1  57.7                                  
REMARK 620 5 F95 A 603   O1   89.5 116.0 130.8  86.9                            
REMARK 620 6 F95 A 603   O3  162.1  85.7  80.4 101.8  74.5                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN B 601  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP B 443   OD1                                                    
REMARK 620 2 ASP B 549   OD1  99.1                                              
REMARK 620 3 F95 B 603   O1   98.4 162.5                                        
REMARK 620 4 F95 B 603   O2  178.1  82.4  80.2                                  
REMARK 620 5 HOH B 705   O    85.6  89.9  89.5  93.3                            
REMARK 620 6 HOH B 717   O    93.1  89.1  91.9  88.1 178.2                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 620                                                                      
REMARK 620 COORDINATION ANGLES FOR:  M RES CSSEQI METAL                         
REMARK 620                              MN B 602  MN                            
REMARK 620 N RES CSSEQI ATOM                                                    
REMARK 620 1 ASP B 443   OD2                                                    
REMARK 620 2 GLU B 478   OE1  87.8                                              
REMARK 620 3 ASP B 498   OD1 121.8  97.3                                        
REMARK 620 4 ASP B 498   OD2  92.7 151.8  58.8                                  
REMARK 620 5 F95 B 603   O1   93.8 110.3 135.9  97.8                            
REMARK 620 6 F95 B 603   O3  158.9  81.5  77.9 105.3  73.1                      
REMARK 620 N                    1     2     3     4     5                       
REMARK 800                                                                      
REMARK 800 SITE                                                                 
REMARK 800 SITE_IDENTIFIER: AC1                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 601                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC2                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 602                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC3                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F95 A 603                 
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC4                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 601                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC5                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 602                  
REMARK 800                                                                      
REMARK 800 SITE_IDENTIFIER: AC6                                                 
REMARK 800 EVIDENCE_CODE: SOFTWARE                                              
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE F95 B 603                 
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 3K2P   RELATED DB: PDB                                   
REMARK 900 HIV-1 RNASE H DOMAIN IN COMPLEX WITH BETA-THUJAPLICINOL, AN ACTIVE   
REMARK 900 SITE RNASE H INHIBITOR                                               
REMARK 900 RELATED ID: 3IG1   RELATED DB: PDB                                   
REMARK 900 FULL-LENGTH HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH BETA-        
REMARK 900 THUJAPLICINOL, AN ACTIVE SITE RNASE H INHIBITOR                      
REMARK 900 RELATED ID: 3QLH   RELATED DB: PDB                                   
REMARK 900 FULL-LENGTH HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH TMC278       
REMARK 900 (RILPIVIRINE) AND MANICOL                                            
REMARK 900 RELATED ID: 3IFJ   RELATED DB: PDB                                   
REMARK 900 FULL-LENGTH HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH DHBNH, AN    
REMARK 900 ALLOSTERIC RNASE H INHIBITOR                                         
REMARK 900 RELATED ID: 4G1Q   RELATED DB: PDB                                   
REMARK 900 FULL-LENGTH HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH TMC278       
REMARK 900 (RILPIVIRINE, EDURANT))                                              
DBREF  4QAG A  425   557  UNP    P03366   POL_HV1B1     1024   1156             
DBREF  4QAG B  425   557  UNP    P03366   POL_HV1B1     1024   1156             
SEQRES   1 A  133  LEU TRP TYR GLN LEU GLU LYS GLU PRO ILE VAL GLY ALA          
SEQRES   2 A  133  GLU THR PHE TYR VAL ASP GLY ALA ALA ASN ARG GLU THR          
SEQRES   3 A  133  LYS LEU GLY LYS ALA GLY TYR VAL THR ASN LYS GLY ARG          
SEQRES   4 A  133  GLN LYS VAL VAL PRO LEU THR ASN THR THR ASN GLN LYS          
SEQRES   5 A  133  THR GLU LEU GLN ALA ILE TYR LEU ALA LEU GLN ASP SER          
SEQRES   6 A  133  GLY LEU GLU VAL ASN ILE VAL THR ASP SER GLN TYR ALA          
SEQRES   7 A  133  LEU GLY ILE ILE GLN ALA GLN PRO ASP LYS SER GLU SER          
SEQRES   8 A  133  GLU LEU VAL ASN GLN ILE ILE GLU GLN LEU ILE LYS LYS          
SEQRES   9 A  133  GLU LYS VAL TYR LEU ALA TRP VAL PRO ALA HIS LYS GLY          
SEQRES  10 A  133  ILE GLY GLY ASN GLU GLN VAL ASP LYS LEU VAL SER ALA          
SEQRES  11 A  133  GLY ILE ARG                                                  
SEQRES   1 B  133  LEU TRP TYR GLN LEU GLU LYS GLU PRO ILE VAL GLY ALA          
SEQRES   2 B  133  GLU THR PHE TYR VAL ASP GLY ALA ALA ASN ARG GLU THR          
SEQRES   3 B  133  LYS LEU GLY LYS ALA GLY TYR VAL THR ASN LYS GLY ARG          
SEQRES   4 B  133  GLN LYS VAL VAL PRO LEU THR ASN THR THR ASN GLN LYS          
SEQRES   5 B  133  THR GLU LEU GLN ALA ILE TYR LEU ALA LEU GLN ASP SER          
SEQRES   6 B  133  GLY LEU GLU VAL ASN ILE VAL THR ASP SER GLN TYR ALA          
SEQRES   7 B  133  LEU GLY ILE ILE GLN ALA GLN PRO ASP LYS SER GLU SER          
SEQRES   8 B  133  GLU LEU VAL ASN GLN ILE ILE GLU GLN LEU ILE LYS LYS          
SEQRES   9 B  133  GLU LYS VAL TYR LEU ALA TRP VAL PRO ALA HIS LYS GLY          
SEQRES  10 B  133  ILE GLY GLY ASN GLU GLN VAL ASP LYS LEU VAL SER ALA          
SEQRES  11 B  133  GLY ILE ARG                                                  
HET     MN  A 601       1                                                       
HET     MN  A 602       1                                                       
HET    F95  A 603      17                                                       
HET     MN  B 601       1                                                       
HET     MN  B 602       1                                                       
HET    F95  B 603      17                                                       
HETNAM      MN MANGANESE (II) ION                                               
HETNAM     F95 (7,8-DIHYDROXY-2-OXO-2H-CHROMEN-4-YL)ACETIC ACID                 
FORMUL   3   MN    4(MN 2+)                                                     
FORMUL   5  F95    2(C11 H8 O6)                                                 
FORMUL   9  HOH   *176(H2 O)                                                    
HELIX    1   1 THR A  473  SER A  489  1                                  17    
HELIX    2   2 SER A  499  ALA A  508  1                                  10    
HELIX    3   3 SER A  515  LYS A  528  1                                  14    
HELIX    4   4 ILE A  542  ALA A  554  1                                  13    
HELIX    5   5 THR B  473  SER B  489  1                                  17    
HELIX    6   6 SER B  499  ALA B  508  1                                  10    
HELIX    7   7 SER B  515  LYS B  528  1                                  14    
HELIX    8   8 ILE B  542  ALA B  554  1                                  13    
SHEET    1   A 5 GLN A 464  LEU A 469  0                                        
SHEET    2   A 5 GLY A 453  THR A 459 -1  N  ALA A 455   O  VAL A 467           
SHEET    3   A 5 THR A 439  ALA A 446 -1  N  TYR A 441   O  VAL A 458           
SHEET    4   A 5 GLU A 492  THR A 497  1  O  ASN A 494   N  PHE A 440           
SHEET    5   A 5 LYS A 530  TRP A 535  1  O  ALA A 534   N  ILE A 495           
SHEET    1   B 5 GLN B 464  LEU B 469  0                                        
SHEET    2   B 5 GLY B 453  THR B 459 -1  N  GLY B 453   O  LEU B 469           
SHEET    3   B 5 THR B 439  ALA B 446 -1  N  TYR B 441   O  VAL B 458           
SHEET    4   B 5 GLU B 492  THR B 497  1  O  ASN B 494   N  PHE B 440           
SHEET    5   B 5 LYS B 530  TRP B 535  1  O  TYR B 532   N  ILE B 495           
LINK         OD1 ASP A 443                MN    MN A 601     1555   1555  2.21  
LINK         OD2 ASP A 443                MN    MN A 602     1555   1555  2.09  
LINK         OE2 GLU A 478                MN    MN A 602     1555   1555  2.08  
LINK         OD1 ASP A 498                MN    MN A 602     1555   1555  2.07  
LINK         OD2 ASP A 498                MN    MN A 602     1555   1555  2.34  
LINK         OD1 ASP A 549                MN    MN A 601     1555   1555  2.14  
LINK        MN    MN A 601                 O1  F95 A 603     1555   1555  1.99  
LINK        MN    MN A 601                 O2  F95 A 603     1555   1555  2.22  
LINK        MN    MN A 601                 O   HOH A 711     1555   1555  2.19  
LINK        MN    MN A 601                 O   HOH A 712     1555   1555  2.21  
LINK        MN    MN A 602                 O1  F95 A 603     1555   1555  2.13  
LINK        MN    MN A 602                 O3  F95 A 603     1555   1555  2.49  
LINK         OD1 ASP B 443                MN    MN B 601     1555   1555  2.19  
LINK         OD2 ASP B 443                MN    MN B 602     1555   1555  2.11  
LINK         OE1 GLU B 478                MN    MN B 602     1555   1555  2.14  
LINK         OD1 ASP B 498                MN    MN B 602     1555   1555  2.08  
LINK         OD2 ASP B 498                MN    MN B 602     1555   1555  2.29  
LINK         OD1 ASP B 549                MN    MN B 601     1555   1555  2.12  
LINK        MN    MN B 601                 O1  F95 B 603     1555   1555  2.14  
LINK        MN    MN B 601                 O2  F95 B 603     1555   1555  2.22  
LINK        MN    MN B 601                 O   HOH B 705     1555   1555  2.20  
LINK        MN    MN B 601                 O   HOH B 717     1555   1555  2.19  
LINK        MN    MN B 602                 O1  F95 B 603     1555   1555  1.99  
LINK        MN    MN B 602                 O3  F95 B 603     1555   1555  2.55  
SITE     1 AC1  6 ASP A 443  ASP A 549   MN A 602  F95 A 603                    
SITE     2 AC1  6 HOH A 711  HOH A 712                                          
SITE     1 AC2  5 ASP A 443  GLU A 478  ASP A 498   MN A 601                    
SITE     2 AC2  5 F95 A 603                                                     
SITE     1 AC3 12 ASP A 443  GLU A 478  ASP A 498  SER A 499                    
SITE     2 AC3 12 HIS A 539  ASP A 549   MN A 601   MN A 602                    
SITE     3 AC3 12 HOH A 711  HOH A 712  HOH A 721  HOH A 780                    
SITE     1 AC4  6 ASP B 443  ASP B 549   MN B 602  F95 B 603                    
SITE     2 AC4  6 HOH B 705  HOH B 717                                          
SITE     1 AC5  5 ASP B 443  GLU B 478  ASP B 498   MN B 601                    
SITE     2 AC5  5 F95 B 603                                                     
SITE     1 AC6 13 ASP B 443  GLU B 478  ASP B 498  SER B 499                    
SITE     2 AC6 13 HIS B 539  ASP B 549   MN B 601   MN B 602                    
SITE     3 AC6 13 HOH B 703  HOH B 705  HOH B 706  HOH B 717                    
SITE     4 AC6 13 HOH B 718                                                     
CRYST1   51.164   51.164  112.100  90.00  90.00 120.00 P 31          6          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.019545  0.011284  0.000000        0.00000                         
SCALE2      0.000000  0.022569  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.008921        0.00000