data_4QBQ # _entry.id 4QBQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4QBQ RCSB RCSB085853 WWPDB D_1000085853 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4qbr . unspecified PDB 4qbs . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4QBQ _pdbx_database_status.recvd_initial_deposition_date 2014-05-08 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Li, H.' 1 'Patel, D.J.' 2 # _citation.id primary _citation.title 'Engineering of a histone-recognition domain in a de novo DNA methyltransferase alters the epigenetic landscape of ESCs' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Noh, K.' 1 primary 'Wang, H.' 2 primary 'Kim, H.' 3 primary 'Wenderski, W.' 4 primary 'Fang, F.' 5 primary 'Li, C.' 6 primary 'Dewell, S.' 7 primary 'Wu, X.' 8 primary 'Ferris, A.' 9 primary 'Hughes, S.H.' 10 primary 'Zheng, D.' 11 primary 'Melnick, A.M.' 12 primary 'Patel, D.J.' 13 primary 'Li, H.' 14 primary 'Allis, C.D.' 15 # _cell.entry_id 4QBQ _cell.length_a 41.557 _cell.length_b 56.424 _cell.length_c 57.301 _cell.angle_alpha 90.00 _cell.angle_beta 90.27 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QBQ _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA (cytosine-5)-methyltransferase 3A' 15386.763 2 2.1.1.37 ? 'ADD Domain, UNP residues 476-611' ? 2 polymer syn 'Histone H3' 934.075 1 ? ? 'H3 N-terminal 1-15' ? 3 non-polymer syn 'ZINC ION' 65.409 6 ? ? ? ? 4 water nat water 18.015 104 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dnmt3a, DNA methyltransferase HsaIIIA, DNA MTase HsaIIIA, M.HsaIIIA' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GPLGSLVYEVRQKCRNIEDICISCGSLNVTLEHPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNN CCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFA ; ;GPLGSLVYEVRQKCRNIEDICISCGSLNVTLEHPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNN CCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFA ; A,C ? 2 'polypeptide(L)' no no ARTKQTAR ARTKQTAR P ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 LEU n 1 7 VAL n 1 8 TYR n 1 9 GLU n 1 10 VAL n 1 11 ARG n 1 12 GLN n 1 13 LYS n 1 14 CYS n 1 15 ARG n 1 16 ASN n 1 17 ILE n 1 18 GLU n 1 19 ASP n 1 20 ILE n 1 21 CYS n 1 22 ILE n 1 23 SER n 1 24 CYS n 1 25 GLY n 1 26 SER n 1 27 LEU n 1 28 ASN n 1 29 VAL n 1 30 THR n 1 31 LEU n 1 32 GLU n 1 33 HIS n 1 34 PRO n 1 35 LEU n 1 36 PHE n 1 37 VAL n 1 38 GLY n 1 39 GLY n 1 40 MET n 1 41 CYS n 1 42 GLN n 1 43 ASN n 1 44 CYS n 1 45 LYS n 1 46 ASN n 1 47 CYS n 1 48 PHE n 1 49 LEU n 1 50 GLU n 1 51 CYS n 1 52 ALA n 1 53 TYR n 1 54 GLN n 1 55 TYR n 1 56 ASP n 1 57 ASP n 1 58 ASP n 1 59 GLY n 1 60 TYR n 1 61 GLN n 1 62 SER n 1 63 TYR n 1 64 CYS n 1 65 THR n 1 66 ILE n 1 67 CYS n 1 68 CYS n 1 69 GLY n 1 70 GLY n 1 71 ARG n 1 72 GLU n 1 73 VAL n 1 74 LEU n 1 75 MET n 1 76 CYS n 1 77 GLY n 1 78 ASN n 1 79 ASN n 1 80 ASN n 1 81 CYS n 1 82 CYS n 1 83 ARG n 1 84 CYS n 1 85 PHE n 1 86 CYS n 1 87 VAL n 1 88 GLU n 1 89 CYS n 1 90 VAL n 1 91 ASP n 1 92 LEU n 1 93 LEU n 1 94 VAL n 1 95 GLY n 1 96 PRO n 1 97 GLY n 1 98 ALA n 1 99 ALA n 1 100 GLN n 1 101 ALA n 1 102 ALA n 1 103 ILE n 1 104 LYS n 1 105 GLU n 1 106 ASP n 1 107 PRO n 1 108 TRP n 1 109 ASN n 1 110 CYS n 1 111 TYR n 1 112 MET n 1 113 CYS n 1 114 GLY n 1 115 HIS n 1 116 LYS n 1 117 GLY n 1 118 THR n 1 119 TYR n 1 120 GLY n 1 121 LEU n 1 122 LEU n 1 123 ARG n 1 124 ARG n 1 125 ARG n 1 126 GLU n 1 127 ASP n 1 128 TRP n 1 129 PRO n 1 130 SER n 1 131 ARG n 1 132 LEU n 1 133 GLN n 1 134 MET n 1 135 PHE n 1 136 PHE n 1 137 ALA n 2 1 ALA n 2 2 ARG n 2 3 THR n 2 4 LYS n 2 5 GLN n 2 6 THR n 2 7 ALA n 2 8 ARG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene DNMT3A _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'This sequence occurs naturally in humans.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DNM3A_HUMAN Q9Y6K1 1 ;LVYEVRQKCRNIEDICISCGSLNVTLEHPLFVGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGGREVLMCGNNNCCRCF CVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPSRLQMFFA ; 479 ? 2 PDB 4QBQ 4QBQ 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4QBQ A 6 ? 137 ? Q9Y6K1 479 ? 610 ? 479 610 2 1 4QBQ C 6 ? 137 ? Q9Y6K1 479 ? 610 ? 479 610 3 2 4QBQ P 1 ? 8 ? 4QBQ 1 ? 8 ? 1 8 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QBQ GLY A 1 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 474 1 1 4QBQ PRO A 2 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 475 2 1 4QBQ LEU A 3 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 476 3 1 4QBQ GLY A 4 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 477 4 1 4QBQ SER A 5 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 478 5 2 4QBQ GLY C 1 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 474 6 2 4QBQ PRO C 2 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 475 7 2 4QBQ LEU C 3 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 476 8 2 4QBQ GLY C 4 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 477 9 2 4QBQ SER C 5 ? UNP Q9Y6K1 ? ? 'EXPRESSION TAG' 478 10 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4QBQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_percent_sol 41.95 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '29% PEGMME5000, 0.1M Bis-Tris Propane-HCL, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-06-30 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 # _reflns.entry_id 4QBQ _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.4 _reflns.number_obs 10349 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.117 _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.percent_possible_all _reflns_shell.Rmerge_I_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.number_measured_all _reflns_shell.number_measured_obs _reflns_shell.number_unique_obs _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_rejects _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.40 2.46 99.4 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 1 2.46 2.52 99.6 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 2 1 2.52 2.59 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 3 1 2.59 2.66 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 4 1 2.66 2.75 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 5 1 2.75 2.85 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 6 1 2.85 2.96 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 7 1 2.96 3.09 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 8 1 3.09 3.26 99.9 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 9 1 3.26 3.46 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 10 1 3.46 3.73 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 11 1 3.73 4.10 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 12 1 4.10 4.70 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 13 1 4.70 5.92 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 14 1 5.92 50.00 100.0 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 15 1 # _refine.entry_id 4QBQ _refine.ls_number_reflns_obs 10329 _refine.ls_number_reflns_all 10420 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 41.557 _refine.ls_d_res_high 2.406 _refine.ls_percent_reflns_obs 99.13 _refine.ls_R_factor_obs 0.1764 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1736 _refine.ls_R_factor_R_free 0.2304 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.81 _refine.ls_number_reflns_R_free 497 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.28 _refine.pdbx_overall_phase_error 23.92 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2189 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 104 _refine_hist.number_atoms_total 2299 _refine_hist.d_res_high 2.406 _refine_hist.d_res_low 41.557 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.009 ? ? 2235 ? 'X-RAY DIFFRACTION' f_angle_d 1.262 ? ? 3012 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 18.089 ? ? 827 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.082 ? ? 312 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 401 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 4 2.4064 2.6485 2368 0.2096 97.00 0.2954 . . 121 . . . . 'X-RAY DIFFRACTION' 4 2.6485 3.0316 2479 0.1982 100.00 0.2693 . . 124 . . . . 'X-RAY DIFFRACTION' 4 3.0316 3.8191 2465 0.1687 100.00 0.2172 . . 129 . . . . 'X-RAY DIFFRACTION' 4 3.8191 41.5627 2520 0.1556 100.00 0.2031 . . 123 . . . . # _struct.entry_id 4QBQ _struct.title 'Crystal structure of DNMT3a ADD domain bound to H3 peptide' _struct.pdbx_descriptor 'DNA (cytosine-5)-methyltransferase 3A (E.C.2.1.1.37), Histone H3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QBQ _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text 'Zinc Finger, Histone Binding, TRANSFERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 4 ? K N N 4 ? L N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 1 ? GLN A 12 ? GLY A 474 GLN A 485 1 ? 12 HELX_P HELX_P2 2 ASN A 16 ? ILE A 20 ? ASN A 489 ILE A 493 5 ? 5 HELX_P HELX_P3 3 CYS A 41 ? ALA A 52 ? CYS A 514 ALA A 525 1 ? 12 HELX_P HELX_P4 4 VAL A 87 ? VAL A 94 ? VAL A 560 VAL A 567 1 ? 8 HELX_P HELX_P5 5 GLY A 97 ? LYS A 104 ? GLY A 570 LYS A 577 1 ? 8 HELX_P HELX_P6 6 ASP A 127 ? PHE A 136 ? ASP A 600 PHE A 609 1 ? 10 HELX_P HELX_P7 7 PRO B 2 ? GLN B 12 ? PRO C 475 GLN C 485 1 ? 11 HELX_P HELX_P8 8 ASN B 16 ? ILE B 20 ? ASN C 489 ILE C 493 5 ? 5 HELX_P HELX_P9 9 CYS B 41 ? CYS B 51 ? CYS C 514 CYS C 524 1 ? 11 HELX_P HELX_P10 10 VAL B 87 ? VAL B 94 ? VAL C 560 VAL C 567 1 ? 8 HELX_P HELX_P11 11 GLY B 97 ? GLU B 105 ? GLY C 570 GLU C 578 1 ? 9 HELX_P HELX_P12 12 ASP B 127 ? PHE B 136 ? ASP C 600 PHE C 609 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? B CYS 51 SG ? ? ? 1_555 B CYS 68 SG ? ? C CYS 524 C CYS 541 1_555 ? ? ? ? ? ? ? 2.032 ? metalc1 metalc ? ? B CYS 44 SG ? ? ? 1_555 I ZN . ZN ? ? C CYS 517 C ZN 703 1_555 ? ? ? ? ? ? ? 2.382 ? metalc2 metalc ? ? B CYS 21 SG ? ? ? 1_555 I ZN . ZN ? ? C CYS 494 C ZN 703 1_555 ? ? ? ? ? ? ? 2.387 ? metalc3 metalc ? ? A CYS 44 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 517 A ZN 703 1_555 ? ? ? ? ? ? ? 2.397 ? metalc4 metalc ? ? B CYS 81 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 554 C ZN 701 1_555 ? ? ? ? ? ? ? 2.420 ? metalc5 metalc ? ? A CYS 89 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 562 A ZN 702 1_555 ? ? ? ? ? ? ? 2.424 ? metalc6 metalc ? ? B CYS 76 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 549 C ZN 701 1_555 ? ? ? ? ? ? ? 2.435 ? metalc7 metalc ? ? B CYS 89 SG ? ? ? 1_555 H ZN . ZN ? ? C CYS 562 C ZN 702 1_555 ? ? ? ? ? ? ? 2.457 ? metalc8 metalc ? ? A CYS 67 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 540 A ZN 702 1_555 ? ? ? ? ? ? ? 2.465 ? metalc9 metalc ? ? B CYS 86 SG ? ? ? 1_555 H ZN . ZN ? ? C CYS 559 C ZN 702 1_555 ? ? ? ? ? ? ? 2.466 ? metalc10 metalc ? ? A CYS 76 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 549 A ZN 701 1_555 ? ? ? ? ? ? ? 2.473 ? metalc11 metalc ? ? A CYS 113 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 586 A ZN 701 1_555 ? ? ? ? ? ? ? 2.480 ? metalc12 metalc ? ? A CYS 64 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 537 A ZN 702 1_555 ? ? ? ? ? ? ? 2.486 ? metalc13 metalc ? ? A CYS 86 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 559 A ZN 702 1_555 ? ? ? ? ? ? ? 2.488 ? metalc14 metalc ? ? A CYS 21 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 494 A ZN 703 1_555 ? ? ? ? ? ? ? 2.491 ? metalc15 metalc ? ? B CYS 64 SG ? ? ? 1_555 H ZN . ZN ? ? C CYS 537 C ZN 702 1_555 ? ? ? ? ? ? ? 2.515 ? metalc16 metalc ? ? A CYS 41 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 514 A ZN 703 1_555 ? ? ? ? ? ? ? 2.519 ? metalc17 metalc ? ? A CYS 81 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 554 A ZN 701 1_555 ? ? ? ? ? ? ? 2.520 ? metalc18 metalc ? ? A CYS 110 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 583 A ZN 701 1_555 ? ? ? ? ? ? ? 2.526 ? metalc19 metalc ? ? B CYS 24 SG ? ? ? 1_555 I ZN . ZN ? ? C CYS 497 C ZN 703 1_555 ? ? ? ? ? ? ? 2.530 ? metalc20 metalc ? ? A CYS 24 SG ? ? ? 1_555 F ZN . ZN ? ? A CYS 497 A ZN 703 1_555 ? ? ? ? ? ? ? 2.536 ? metalc21 metalc ? ? B CYS 67 SG ? ? ? 1_555 H ZN . ZN ? ? C CYS 540 C ZN 702 1_555 ? ? ? ? ? ? ? 2.553 ? metalc22 metalc ? ? B CYS 41 SG ? ? ? 1_555 I ZN . ZN ? ? C CYS 514 C ZN 703 1_555 ? ? ? ? ? ? ? 2.556 ? metalc23 metalc ? ? B CYS 110 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 583 C ZN 701 1_555 ? ? ? ? ? ? ? 2.566 ? metalc24 metalc ? ? B CYS 113 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 586 C ZN 701 1_555 ? ? ? ? ? ? ? 2.587 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 106 A . ? ASP 579 A PRO 107 A ? PRO 580 A 1 -4.83 2 ASP 106 B . ? ASP 579 C PRO 107 B ? PRO 580 C 1 -4.19 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? D ? 2 ? E ? 3 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 31 ? GLU A 32 ? LEU A 504 GLU A 505 A 2 GLY A 39 ? MET A 40 ? GLY A 512 MET A 513 B 1 VAL A 73 ? MET A 75 ? VAL A 546 MET A 548 B 2 CYS A 84 ? CYS A 86 ? CYS A 557 CYS A 559 C 1 THR A 118 ? TYR A 119 ? THR A 591 TYR A 592 C 2 LEU A 122 ? ARG A 123 ? LEU A 595 ARG A 596 D 1 LEU B 31 ? GLU B 32 ? LEU C 504 GLU C 505 D 2 GLY B 39 ? MET B 40 ? GLY C 512 MET C 513 E 1 CYS B 84 ? CYS B 86 ? CYS C 557 CYS C 559 E 2 GLU B 72 ? MET B 75 ? GLU C 545 MET C 548 E 3 THR C 3 ? GLN C 5 ? THR P 3 GLN P 5 F 1 THR B 118 ? TYR B 119 ? THR C 591 TYR C 592 F 2 LEU B 122 ? ARG B 123 ? LEU C 595 ARG C 596 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 31 ? N LEU A 504 O MET A 40 ? O MET A 513 B 1 2 N LEU A 74 ? N LEU A 547 O PHE A 85 ? O PHE A 558 C 1 2 N TYR A 119 ? N TYR A 592 O LEU A 122 ? O LEU A 595 D 1 2 N LEU B 31 ? N LEU C 504 O MET B 40 ? O MET C 513 E 1 2 O PHE B 85 ? O PHE C 558 N LEU B 74 ? N LEU C 547 E 2 3 N VAL B 73 ? N VAL C 546 O LYS C 4 ? O LYS P 4 F 1 2 N TYR B 119 ? N TYR C 592 O LEU B 122 ? O LEU C 595 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 701' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 702' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 703' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN C 701' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN C 702' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN C 703' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 76 ? CYS A 549 . ? 1_555 ? 2 AC1 4 CYS A 81 ? CYS A 554 . ? 1_555 ? 3 AC1 4 CYS A 110 ? CYS A 583 . ? 1_555 ? 4 AC1 4 CYS A 113 ? CYS A 586 . ? 1_555 ? 5 AC2 4 CYS A 64 ? CYS A 537 . ? 1_555 ? 6 AC2 4 CYS A 67 ? CYS A 540 . ? 1_555 ? 7 AC2 4 CYS A 86 ? CYS A 559 . ? 1_555 ? 8 AC2 4 CYS A 89 ? CYS A 562 . ? 1_555 ? 9 AC3 4 CYS A 21 ? CYS A 494 . ? 1_555 ? 10 AC3 4 CYS A 24 ? CYS A 497 . ? 1_555 ? 11 AC3 4 CYS A 41 ? CYS A 514 . ? 1_555 ? 12 AC3 4 CYS A 44 ? CYS A 517 . ? 1_555 ? 13 AC4 4 CYS B 76 ? CYS C 549 . ? 1_555 ? 14 AC4 4 CYS B 81 ? CYS C 554 . ? 1_555 ? 15 AC4 4 CYS B 110 ? CYS C 583 . ? 1_555 ? 16 AC4 4 CYS B 113 ? CYS C 586 . ? 1_555 ? 17 AC5 4 CYS B 64 ? CYS C 537 . ? 1_555 ? 18 AC5 4 CYS B 67 ? CYS C 540 . ? 1_555 ? 19 AC5 4 CYS B 86 ? CYS C 559 . ? 1_555 ? 20 AC5 4 CYS B 89 ? CYS C 562 . ? 1_555 ? 21 AC6 4 CYS B 21 ? CYS C 494 . ? 1_555 ? 22 AC6 4 CYS B 24 ? CYS C 497 . ? 1_555 ? 23 AC6 4 CYS B 41 ? CYS C 514 . ? 1_555 ? 24 AC6 4 CYS B 44 ? CYS C 517 . ? 1_555 ? # _database_PDB_matrix.entry_id 4QBQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4QBQ _atom_sites.fract_transf_matrix[1][1] 0.024063 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000114 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017723 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017452 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 474 474 GLY GLY A . n A 1 2 PRO 2 475 475 PRO PRO A . n A 1 3 LEU 3 476 476 LEU LEU A . n A 1 4 GLY 4 477 477 GLY GLY A . n A 1 5 SER 5 478 478 SER SER A . n A 1 6 LEU 6 479 479 LEU LEU A . n A 1 7 VAL 7 480 480 VAL VAL A . n A 1 8 TYR 8 481 481 TYR TYR A . n A 1 9 GLU 9 482 482 GLU GLU A . n A 1 10 VAL 10 483 483 VAL VAL A . n A 1 11 ARG 11 484 484 ARG ARG A . n A 1 12 GLN 12 485 485 GLN GLN A . n A 1 13 LYS 13 486 486 LYS LYS A . n A 1 14 CYS 14 487 487 CYS CYS A . n A 1 15 ARG 15 488 488 ARG ARG A . n A 1 16 ASN 16 489 489 ASN ASN A . n A 1 17 ILE 17 490 490 ILE ILE A . n A 1 18 GLU 18 491 491 GLU GLU A . n A 1 19 ASP 19 492 492 ASP ASP A . n A 1 20 ILE 20 493 493 ILE ILE A . n A 1 21 CYS 21 494 494 CYS CYS A . n A 1 22 ILE 22 495 495 ILE ILE A . n A 1 23 SER 23 496 496 SER SER A . n A 1 24 CYS 24 497 497 CYS CYS A . n A 1 25 GLY 25 498 498 GLY GLY A . n A 1 26 SER 26 499 499 SER SER A . n A 1 27 LEU 27 500 500 LEU LEU A . n A 1 28 ASN 28 501 501 ASN ASN A . n A 1 29 VAL 29 502 502 VAL VAL A . n A 1 30 THR 30 503 503 THR THR A . n A 1 31 LEU 31 504 504 LEU LEU A . n A 1 32 GLU 32 505 505 GLU GLU A . n A 1 33 HIS 33 506 506 HIS HIS A . n A 1 34 PRO 34 507 507 PRO PRO A . n A 1 35 LEU 35 508 508 LEU LEU A . n A 1 36 PHE 36 509 509 PHE PHE A . n A 1 37 VAL 37 510 510 VAL VAL A . n A 1 38 GLY 38 511 511 GLY GLY A . n A 1 39 GLY 39 512 512 GLY GLY A . n A 1 40 MET 40 513 513 MET MET A . n A 1 41 CYS 41 514 514 CYS CYS A . n A 1 42 GLN 42 515 515 GLN GLN A . n A 1 43 ASN 43 516 516 ASN ASN A . n A 1 44 CYS 44 517 517 CYS CYS A . n A 1 45 LYS 45 518 518 LYS LYS A . n A 1 46 ASN 46 519 519 ASN ASN A . n A 1 47 CYS 47 520 520 CYS CYS A . n A 1 48 PHE 48 521 521 PHE PHE A . n A 1 49 LEU 49 522 522 LEU LEU A . n A 1 50 GLU 50 523 523 GLU GLU A . n A 1 51 CYS 51 524 524 CYS CYS A . n A 1 52 ALA 52 525 525 ALA ALA A . n A 1 53 TYR 53 526 526 TYR TYR A . n A 1 54 GLN 54 527 527 GLN GLN A . n A 1 55 TYR 55 528 528 TYR TYR A . n A 1 56 ASP 56 529 529 ASP ASP A . n A 1 57 ASP 57 530 530 ASP ASP A . n A 1 58 ASP 58 531 531 ASP ASP A . n A 1 59 GLY 59 532 532 GLY GLY A . n A 1 60 TYR 60 533 533 TYR TYR A . n A 1 61 GLN 61 534 534 GLN GLN A . n A 1 62 SER 62 535 535 SER SER A . n A 1 63 TYR 63 536 536 TYR TYR A . n A 1 64 CYS 64 537 537 CYS CYS A . n A 1 65 THR 65 538 538 THR THR A . n A 1 66 ILE 66 539 539 ILE ILE A . n A 1 67 CYS 67 540 540 CYS CYS A . n A 1 68 CYS 68 541 541 CYS CYS A . n A 1 69 GLY 69 542 542 GLY GLY A . n A 1 70 GLY 70 543 543 GLY GLY A . n A 1 71 ARG 71 544 544 ARG ARG A . n A 1 72 GLU 72 545 545 GLU GLU A . n A 1 73 VAL 73 546 546 VAL VAL A . n A 1 74 LEU 74 547 547 LEU LEU A . n A 1 75 MET 75 548 548 MET MET A . n A 1 76 CYS 76 549 549 CYS CYS A . n A 1 77 GLY 77 550 550 GLY GLY A . n A 1 78 ASN 78 551 551 ASN ASN A . n A 1 79 ASN 79 552 552 ASN ASN A . n A 1 80 ASN 80 553 553 ASN ASN A . n A 1 81 CYS 81 554 554 CYS CYS A . n A 1 82 CYS 82 555 555 CYS CYS A . n A 1 83 ARG 83 556 556 ARG ARG A . n A 1 84 CYS 84 557 557 CYS CYS A . n A 1 85 PHE 85 558 558 PHE PHE A . n A 1 86 CYS 86 559 559 CYS CYS A . n A 1 87 VAL 87 560 560 VAL VAL A . n A 1 88 GLU 88 561 561 GLU GLU A . n A 1 89 CYS 89 562 562 CYS CYS A . n A 1 90 VAL 90 563 563 VAL VAL A . n A 1 91 ASP 91 564 564 ASP ASP A . n A 1 92 LEU 92 565 565 LEU LEU A . n A 1 93 LEU 93 566 566 LEU LEU A . n A 1 94 VAL 94 567 567 VAL VAL A . n A 1 95 GLY 95 568 568 GLY GLY A . n A 1 96 PRO 96 569 569 PRO PRO A . n A 1 97 GLY 97 570 570 GLY GLY A . n A 1 98 ALA 98 571 571 ALA ALA A . n A 1 99 ALA 99 572 572 ALA ALA A . n A 1 100 GLN 100 573 573 GLN GLN A . n A 1 101 ALA 101 574 574 ALA ALA A . n A 1 102 ALA 102 575 575 ALA ALA A . n A 1 103 ILE 103 576 576 ILE ILE A . n A 1 104 LYS 104 577 577 LYS LYS A . n A 1 105 GLU 105 578 578 GLU GLU A . n A 1 106 ASP 106 579 579 ASP ASP A . n A 1 107 PRO 107 580 580 PRO PRO A . n A 1 108 TRP 108 581 581 TRP TRP A . n A 1 109 ASN 109 582 582 ASN ASN A . n A 1 110 CYS 110 583 583 CYS CYS A . n A 1 111 TYR 111 584 584 TYR TYR A . n A 1 112 MET 112 585 585 MET MET A . n A 1 113 CYS 113 586 586 CYS CYS A . n A 1 114 GLY 114 587 587 GLY GLY A . n A 1 115 HIS 115 588 588 HIS HIS A . n A 1 116 LYS 116 589 589 LYS LYS A . n A 1 117 GLY 117 590 590 GLY GLY A . n A 1 118 THR 118 591 591 THR THR A . n A 1 119 TYR 119 592 592 TYR TYR A . n A 1 120 GLY 120 593 593 GLY GLY A . n A 1 121 LEU 121 594 594 LEU LEU A . n A 1 122 LEU 122 595 595 LEU LEU A . n A 1 123 ARG 123 596 596 ARG ARG A . n A 1 124 ARG 124 597 597 ARG ARG A . n A 1 125 ARG 125 598 598 ARG ARG A . n A 1 126 GLU 126 599 599 GLU GLU A . n A 1 127 ASP 127 600 600 ASP ASP A . n A 1 128 TRP 128 601 601 TRP TRP A . n A 1 129 PRO 129 602 602 PRO PRO A . n A 1 130 SER 130 603 603 SER SER A . n A 1 131 ARG 131 604 604 ARG ARG A . n A 1 132 LEU 132 605 605 LEU LEU A . n A 1 133 GLN 133 606 606 GLN GLN A . n A 1 134 MET 134 607 607 MET MET A . n A 1 135 PHE 135 608 608 PHE PHE A . n A 1 136 PHE 136 609 609 PHE PHE A . n A 1 137 ALA 137 610 610 ALA ALA A . n B 1 1 GLY 1 474 474 GLY GLY C . n B 1 2 PRO 2 475 475 PRO PRO C . n B 1 3 LEU 3 476 476 LEU LEU C . n B 1 4 GLY 4 477 477 GLY GLY C . n B 1 5 SER 5 478 478 SER SER C . n B 1 6 LEU 6 479 479 LEU LEU C . n B 1 7 VAL 7 480 480 VAL VAL C . n B 1 8 TYR 8 481 481 TYR TYR C . n B 1 9 GLU 9 482 482 GLU GLU C . n B 1 10 VAL 10 483 483 VAL VAL C . n B 1 11 ARG 11 484 484 ARG ARG C . n B 1 12 GLN 12 485 485 GLN GLN C . n B 1 13 LYS 13 486 486 LYS LYS C . n B 1 14 CYS 14 487 487 CYS CYS C . n B 1 15 ARG 15 488 488 ARG ARG C . n B 1 16 ASN 16 489 489 ASN ASN C . n B 1 17 ILE 17 490 490 ILE ILE C . n B 1 18 GLU 18 491 491 GLU GLU C . n B 1 19 ASP 19 492 492 ASP ASP C . n B 1 20 ILE 20 493 493 ILE ILE C . n B 1 21 CYS 21 494 494 CYS CYS C . n B 1 22 ILE 22 495 495 ILE ILE C . n B 1 23 SER 23 496 496 SER SER C . n B 1 24 CYS 24 497 497 CYS CYS C . n B 1 25 GLY 25 498 498 GLY GLY C . n B 1 26 SER 26 499 499 SER SER C . n B 1 27 LEU 27 500 500 LEU LEU C . n B 1 28 ASN 28 501 501 ASN ASN C . n B 1 29 VAL 29 502 502 VAL VAL C . n B 1 30 THR 30 503 503 THR THR C . n B 1 31 LEU 31 504 504 LEU LEU C . n B 1 32 GLU 32 505 505 GLU GLU C . n B 1 33 HIS 33 506 506 HIS HIS C . n B 1 34 PRO 34 507 507 PRO PRO C . n B 1 35 LEU 35 508 508 LEU LEU C . n B 1 36 PHE 36 509 509 PHE PHE C . n B 1 37 VAL 37 510 510 VAL VAL C . n B 1 38 GLY 38 511 511 GLY GLY C . n B 1 39 GLY 39 512 512 GLY GLY C . n B 1 40 MET 40 513 513 MET MET C . n B 1 41 CYS 41 514 514 CYS CYS C . n B 1 42 GLN 42 515 515 GLN GLN C . n B 1 43 ASN 43 516 516 ASN ASN C . n B 1 44 CYS 44 517 517 CYS CYS C . n B 1 45 LYS 45 518 518 LYS LYS C . n B 1 46 ASN 46 519 519 ASN ASN C . n B 1 47 CYS 47 520 520 CYS CYS C . n B 1 48 PHE 48 521 521 PHE PHE C . n B 1 49 LEU 49 522 522 LEU LEU C . n B 1 50 GLU 50 523 523 GLU GLU C . n B 1 51 CYS 51 524 524 CYS CYS C . n B 1 52 ALA 52 525 525 ALA ALA C . n B 1 53 TYR 53 526 526 TYR TYR C . n B 1 54 GLN 54 527 527 GLN GLN C . n B 1 55 TYR 55 528 528 TYR TYR C . n B 1 56 ASP 56 529 529 ASP ASP C . n B 1 57 ASP 57 530 530 ASP ASP C . n B 1 58 ASP 58 531 531 ASP ASP C . n B 1 59 GLY 59 532 532 GLY GLY C . n B 1 60 TYR 60 533 533 TYR TYR C . n B 1 61 GLN 61 534 534 GLN GLN C . n B 1 62 SER 62 535 535 SER SER C . n B 1 63 TYR 63 536 536 TYR TYR C . n B 1 64 CYS 64 537 537 CYS CYS C . n B 1 65 THR 65 538 538 THR THR C . n B 1 66 ILE 66 539 539 ILE ILE C . n B 1 67 CYS 67 540 540 CYS CYS C . n B 1 68 CYS 68 541 541 CYS CYS C . n B 1 69 GLY 69 542 542 GLY GLY C . n B 1 70 GLY 70 543 543 GLY GLY C . n B 1 71 ARG 71 544 544 ARG ARG C . n B 1 72 GLU 72 545 545 GLU GLU C . n B 1 73 VAL 73 546 546 VAL VAL C . n B 1 74 LEU 74 547 547 LEU LEU C . n B 1 75 MET 75 548 548 MET MET C . n B 1 76 CYS 76 549 549 CYS CYS C . n B 1 77 GLY 77 550 550 GLY GLY C . n B 1 78 ASN 78 551 551 ASN ASN C . n B 1 79 ASN 79 552 552 ASN ASN C . n B 1 80 ASN 80 553 553 ASN ASN C . n B 1 81 CYS 81 554 554 CYS CYS C . n B 1 82 CYS 82 555 555 CYS CYS C . n B 1 83 ARG 83 556 556 ARG ARG C . n B 1 84 CYS 84 557 557 CYS CYS C . n B 1 85 PHE 85 558 558 PHE PHE C . n B 1 86 CYS 86 559 559 CYS CYS C . n B 1 87 VAL 87 560 560 VAL VAL C . n B 1 88 GLU 88 561 561 GLU GLU C . n B 1 89 CYS 89 562 562 CYS CYS C . n B 1 90 VAL 90 563 563 VAL VAL C . n B 1 91 ASP 91 564 564 ASP ASP C . n B 1 92 LEU 92 565 565 LEU LEU C . n B 1 93 LEU 93 566 566 LEU LEU C . n B 1 94 VAL 94 567 567 VAL VAL C . n B 1 95 GLY 95 568 568 GLY GLY C . n B 1 96 PRO 96 569 569 PRO PRO C . n B 1 97 GLY 97 570 570 GLY GLY C . n B 1 98 ALA 98 571 571 ALA ALA C . n B 1 99 ALA 99 572 572 ALA ALA C . n B 1 100 GLN 100 573 573 GLN GLN C . n B 1 101 ALA 101 574 574 ALA ALA C . n B 1 102 ALA 102 575 575 ALA ALA C . n B 1 103 ILE 103 576 576 ILE ILE C . n B 1 104 LYS 104 577 577 LYS LYS C . n B 1 105 GLU 105 578 578 GLU GLU C . n B 1 106 ASP 106 579 579 ASP ASP C . n B 1 107 PRO 107 580 580 PRO PRO C . n B 1 108 TRP 108 581 581 TRP TRP C . n B 1 109 ASN 109 582 582 ASN ASN C . n B 1 110 CYS 110 583 583 CYS CYS C . n B 1 111 TYR 111 584 584 TYR TYR C . n B 1 112 MET 112 585 585 MET MET C . n B 1 113 CYS 113 586 586 CYS CYS C . n B 1 114 GLY 114 587 587 GLY GLY C . n B 1 115 HIS 115 588 588 HIS HIS C . n B 1 116 LYS 116 589 589 LYS LYS C . n B 1 117 GLY 117 590 590 GLY GLY C . n B 1 118 THR 118 591 591 THR THR C . n B 1 119 TYR 119 592 592 TYR TYR C . n B 1 120 GLY 120 593 593 GLY GLY C . n B 1 121 LEU 121 594 594 LEU LEU C . n B 1 122 LEU 122 595 595 LEU LEU C . n B 1 123 ARG 123 596 596 ARG ARG C . n B 1 124 ARG 124 597 597 ARG ARG C . n B 1 125 ARG 125 598 598 ARG ARG C . n B 1 126 GLU 126 599 599 GLU GLU C . n B 1 127 ASP 127 600 600 ASP ASP C . n B 1 128 TRP 128 601 601 TRP TRP C . n B 1 129 PRO 129 602 602 PRO PRO C . n B 1 130 SER 130 603 603 SER SER C . n B 1 131 ARG 131 604 604 ARG ARG C . n B 1 132 LEU 132 605 605 LEU LEU C . n B 1 133 GLN 133 606 606 GLN GLN C . n B 1 134 MET 134 607 607 MET MET C . n B 1 135 PHE 135 608 608 PHE PHE C . n B 1 136 PHE 136 609 609 PHE PHE C . n B 1 137 ALA 137 610 610 ALA ALA C . n C 2 1 ALA 1 1 1 ALA ALA P . n C 2 2 ARG 2 2 2 ARG ARG P . n C 2 3 THR 3 3 3 THR THR P . n C 2 4 LYS 4 4 4 LYS LYS P . n C 2 5 GLN 5 5 5 GLN GLN P . n C 2 6 THR 6 6 6 THR THR P . n C 2 7 ALA 7 7 7 ALA ALA P . n C 2 8 ARG 8 8 8 ARG ARG P . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2400 ? 1 MORE -9 ? 1 'SSA (A^2)' 14090 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? B CYS 44 ? C CYS 517 ? 1_555 ZN ? I ZN . ? C ZN 703 ? 1_555 SG ? B CYS 21 ? C CYS 494 ? 1_555 109.5 ? 2 SG ? B CYS 44 ? C CYS 517 ? 1_555 ZN ? I ZN . ? C ZN 703 ? 1_555 SG ? B CYS 24 ? C CYS 497 ? 1_555 102.6 ? 3 SG ? B CYS 21 ? C CYS 494 ? 1_555 ZN ? I ZN . ? C ZN 703 ? 1_555 SG ? B CYS 24 ? C CYS 497 ? 1_555 113.9 ? 4 SG ? B CYS 44 ? C CYS 517 ? 1_555 ZN ? I ZN . ? C ZN 703 ? 1_555 SG ? B CYS 41 ? C CYS 514 ? 1_555 109.5 ? 5 SG ? B CYS 21 ? C CYS 494 ? 1_555 ZN ? I ZN . ? C ZN 703 ? 1_555 SG ? B CYS 41 ? C CYS 514 ? 1_555 115.9 ? 6 SG ? B CYS 24 ? C CYS 497 ? 1_555 ZN ? I ZN . ? C ZN 703 ? 1_555 SG ? B CYS 41 ? C CYS 514 ? 1_555 104.5 ? 7 SG ? A CYS 44 ? A CYS 517 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 SG ? A CYS 21 ? A CYS 494 ? 1_555 111.9 ? 8 SG ? A CYS 44 ? A CYS 517 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 SG ? A CYS 41 ? A CYS 514 ? 1_555 101.8 ? 9 SG ? A CYS 21 ? A CYS 494 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 SG ? A CYS 41 ? A CYS 514 ? 1_555 113.7 ? 10 SG ? A CYS 44 ? A CYS 517 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 SG ? A CYS 24 ? A CYS 497 ? 1_555 108.8 ? 11 SG ? A CYS 21 ? A CYS 494 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 SG ? A CYS 24 ? A CYS 497 ? 1_555 114.0 ? 12 SG ? A CYS 41 ? A CYS 514 ? 1_555 ZN ? F ZN . ? A ZN 703 ? 1_555 SG ? A CYS 24 ? A CYS 497 ? 1_555 105.7 ? 13 SG ? B CYS 81 ? C CYS 554 ? 1_555 ZN ? G ZN . ? C ZN 701 ? 1_555 SG ? B CYS 76 ? C CYS 549 ? 1_555 112.0 ? 14 SG ? B CYS 81 ? C CYS 554 ? 1_555 ZN ? G ZN . ? C ZN 701 ? 1_555 SG ? B CYS 110 ? C CYS 583 ? 1_555 106.0 ? 15 SG ? B CYS 76 ? C CYS 549 ? 1_555 ZN ? G ZN . ? C ZN 701 ? 1_555 SG ? B CYS 110 ? C CYS 583 ? 1_555 108.2 ? 16 SG ? B CYS 81 ? C CYS 554 ? 1_555 ZN ? G ZN . ? C ZN 701 ? 1_555 SG ? B CYS 113 ? C CYS 586 ? 1_555 98.6 ? 17 SG ? B CYS 76 ? C CYS 549 ? 1_555 ZN ? G ZN . ? C ZN 701 ? 1_555 SG ? B CYS 113 ? C CYS 586 ? 1_555 119.9 ? 18 SG ? B CYS 110 ? C CYS 583 ? 1_555 ZN ? G ZN . ? C ZN 701 ? 1_555 SG ? B CYS 113 ? C CYS 586 ? 1_555 111.1 ? 19 SG ? A CYS 89 ? A CYS 562 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 SG ? A CYS 67 ? A CYS 540 ? 1_555 110.7 ? 20 SG ? A CYS 89 ? A CYS 562 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 SG ? A CYS 64 ? A CYS 537 ? 1_555 113.4 ? 21 SG ? A CYS 67 ? A CYS 540 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 SG ? A CYS 64 ? A CYS 537 ? 1_555 106.3 ? 22 SG ? A CYS 89 ? A CYS 562 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 SG ? A CYS 86 ? A CYS 559 ? 1_555 103.0 ? 23 SG ? A CYS 67 ? A CYS 540 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 SG ? A CYS 86 ? A CYS 559 ? 1_555 110.4 ? 24 SG ? A CYS 64 ? A CYS 537 ? 1_555 ZN ? E ZN . ? A ZN 702 ? 1_555 SG ? A CYS 86 ? A CYS 559 ? 1_555 113.0 ? 25 SG ? B CYS 89 ? C CYS 562 ? 1_555 ZN ? H ZN . ? C ZN 702 ? 1_555 SG ? B CYS 86 ? C CYS 559 ? 1_555 110.2 ? 26 SG ? B CYS 89 ? C CYS 562 ? 1_555 ZN ? H ZN . ? C ZN 702 ? 1_555 SG ? B CYS 64 ? C CYS 537 ? 1_555 111.2 ? 27 SG ? B CYS 86 ? C CYS 559 ? 1_555 ZN ? H ZN . ? C ZN 702 ? 1_555 SG ? B CYS 64 ? C CYS 537 ? 1_555 112.5 ? 28 SG ? B CYS 89 ? C CYS 562 ? 1_555 ZN ? H ZN . ? C ZN 702 ? 1_555 SG ? B CYS 67 ? C CYS 540 ? 1_555 106.1 ? 29 SG ? B CYS 86 ? C CYS 559 ? 1_555 ZN ? H ZN . ? C ZN 702 ? 1_555 SG ? B CYS 67 ? C CYS 540 ? 1_555 112.2 ? 30 SG ? B CYS 64 ? C CYS 537 ? 1_555 ZN ? H ZN . ? C ZN 702 ? 1_555 SG ? B CYS 67 ? C CYS 540 ? 1_555 104.3 ? 31 SG ? A CYS 76 ? A CYS 549 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 SG ? A CYS 113 ? A CYS 586 ? 1_555 110.0 ? 32 SG ? A CYS 76 ? A CYS 549 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 SG ? A CYS 81 ? A CYS 554 ? 1_555 115.5 ? 33 SG ? A CYS 113 ? A CYS 586 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 SG ? A CYS 81 ? A CYS 554 ? 1_555 103.9 ? 34 SG ? A CYS 76 ? A CYS 549 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 SG ? A CYS 110 ? A CYS 583 ? 1_555 110.6 ? 35 SG ? A CYS 113 ? A CYS 586 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 SG ? A CYS 110 ? A CYS 583 ? 1_555 113.7 ? 36 SG ? A CYS 81 ? A CYS 554 ? 1_555 ZN ? D ZN . ? A ZN 701 ? 1_555 SG ? A CYS 110 ? A CYS 583 ? 1_555 103.0 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2015-05-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 MOLREP phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 4QBQ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE SEQUENCE OF THE ENTITY2 OF THIS PROTEIN WAS NOT AVAILABLE AT THE UNIPROT KNOWLEDGEBASE DATABASE (UNIPROTKB) AT THE TIME OF DEPOSITION. AUTHORS STATE THAT THE ENTITY2 HAS THE GENEBANK ACCESSION NUMBER AAH43617.1. ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 848 ? ? O A HOH 849 ? ? 1.93 2 1 O A HOH 806 ? ? O A HOH 843 ? ? 1.95 3 1 O A HOH 821 ? ? O A HOH 836 ? ? 2.02 4 1 NH2 A ARG 596 ? ? O A HOH 838 ? ? 2.14 5 1 OE1 A GLU 505 ? ? NH2 A ARG 604 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 544 ? ? -95.19 -101.44 2 1 CYS A 554 ? ? -121.68 -71.21 3 1 LYS A 577 ? ? -93.54 48.71 4 1 CYS C 497 ? ? -143.16 -16.27 5 1 ARG C 544 ? ? -96.38 -73.02 6 1 ASN C 552 ? ? 54.43 -93.34 7 1 ASN C 553 ? ? -67.94 9.69 8 1 CYS C 554 ? ? -103.20 -69.40 9 1 PRO C 580 ? ? -74.89 -155.63 10 1 PHE C 609 ? ? -91.78 45.85 11 1 ALA P 7 ? ? -112.58 74.17 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ZN 1 701 1 ZN ZN2 A . E 3 ZN 1 702 2 ZN ZN2 A . F 3 ZN 1 703 3 ZN ZN2 A . G 3 ZN 1 701 1 ZN ZN2 C . H 3 ZN 1 702 2 ZN ZN2 C . I 3 ZN 1 703 3 ZN ZN2 C . J 4 HOH 1 801 1 HOH HOH A . J 4 HOH 2 802 2 HOH HOH A . J 4 HOH 3 803 4 HOH HOH A . J 4 HOH 4 804 7 HOH HOH A . J 4 HOH 5 805 8 HOH HOH A . J 4 HOH 6 806 10 HOH HOH A . J 4 HOH 7 807 11 HOH HOH A . J 4 HOH 8 808 12 HOH HOH A . J 4 HOH 9 809 13 HOH HOH A . J 4 HOH 10 810 14 HOH HOH A . J 4 HOH 11 811 15 HOH HOH A . J 4 HOH 12 812 16 HOH HOH A . J 4 HOH 13 813 17 HOH HOH A . J 4 HOH 14 814 19 HOH HOH A . J 4 HOH 15 815 21 HOH HOH A . J 4 HOH 16 816 23 HOH HOH A . J 4 HOH 17 817 24 HOH HOH A . J 4 HOH 18 818 25 HOH HOH A . J 4 HOH 19 819 26 HOH HOH A . J 4 HOH 20 820 28 HOH HOH A . J 4 HOH 21 821 30 HOH HOH A . J 4 HOH 22 822 31 HOH HOH A . J 4 HOH 23 823 37 HOH HOH A . J 4 HOH 24 824 40 HOH HOH A . J 4 HOH 25 825 41 HOH HOH A . J 4 HOH 26 826 43 HOH HOH A . J 4 HOH 27 827 44 HOH HOH A . J 4 HOH 28 828 45 HOH HOH A . J 4 HOH 29 829 49 HOH HOH A . J 4 HOH 30 830 53 HOH HOH A . J 4 HOH 31 831 58 HOH HOH A . J 4 HOH 32 832 60 HOH HOH A . J 4 HOH 33 833 69 HOH HOH A . J 4 HOH 34 834 71 HOH HOH A . J 4 HOH 35 835 73 HOH HOH A . J 4 HOH 36 836 74 HOH HOH A . J 4 HOH 37 837 75 HOH HOH A . J 4 HOH 38 838 76 HOH HOH A . J 4 HOH 39 839 79 HOH HOH A . J 4 HOH 40 840 80 HOH HOH A . J 4 HOH 41 841 82 HOH HOH A . J 4 HOH 42 842 83 HOH HOH A . J 4 HOH 43 843 85 HOH HOH A . J 4 HOH 44 844 87 HOH HOH A . J 4 HOH 45 845 88 HOH HOH A . J 4 HOH 46 846 90 HOH HOH A . J 4 HOH 47 847 91 HOH HOH A . J 4 HOH 48 848 93 HOH HOH A . J 4 HOH 49 849 94 HOH HOH A . J 4 HOH 50 850 95 HOH HOH A . J 4 HOH 51 851 97 HOH HOH A . J 4 HOH 52 852 98 HOH HOH A . J 4 HOH 53 853 100 HOH HOH A . K 4 HOH 1 801 3 HOH HOH C . K 4 HOH 2 802 5 HOH HOH C . K 4 HOH 3 803 6 HOH HOH C . K 4 HOH 4 804 9 HOH HOH C . K 4 HOH 5 805 18 HOH HOH C . K 4 HOH 6 806 20 HOH HOH C . K 4 HOH 7 807 22 HOH HOH C . K 4 HOH 8 808 27 HOH HOH C . K 4 HOH 9 809 29 HOH HOH C . K 4 HOH 10 810 32 HOH HOH C . K 4 HOH 11 811 33 HOH HOH C . K 4 HOH 12 812 34 HOH HOH C . K 4 HOH 13 813 35 HOH HOH C . K 4 HOH 14 814 36 HOH HOH C . K 4 HOH 15 815 38 HOH HOH C . K 4 HOH 16 816 39 HOH HOH C . K 4 HOH 17 817 42 HOH HOH C . K 4 HOH 18 818 46 HOH HOH C . K 4 HOH 19 819 47 HOH HOH C . K 4 HOH 20 820 48 HOH HOH C . K 4 HOH 21 821 51 HOH HOH C . K 4 HOH 22 822 52 HOH HOH C . K 4 HOH 23 823 54 HOH HOH C . K 4 HOH 24 824 55 HOH HOH C . K 4 HOH 25 825 56 HOH HOH C . K 4 HOH 26 826 57 HOH HOH C . K 4 HOH 27 827 61 HOH HOH C . K 4 HOH 28 828 62 HOH HOH C . K 4 HOH 29 829 63 HOH HOH C . K 4 HOH 30 830 64 HOH HOH C . K 4 HOH 31 831 65 HOH HOH C . K 4 HOH 32 832 66 HOH HOH C . K 4 HOH 33 833 67 HOH HOH C . K 4 HOH 34 834 68 HOH HOH C . K 4 HOH 35 835 70 HOH HOH C . K 4 HOH 36 836 72 HOH HOH C . K 4 HOH 37 837 77 HOH HOH C . K 4 HOH 38 838 78 HOH HOH C . K 4 HOH 39 839 81 HOH HOH C . K 4 HOH 40 840 84 HOH HOH C . K 4 HOH 41 841 86 HOH HOH C . K 4 HOH 42 842 89 HOH HOH C . K 4 HOH 43 843 92 HOH HOH C . K 4 HOH 44 844 96 HOH HOH C . K 4 HOH 45 845 99 HOH HOH C . K 4 HOH 46 846 101 HOH HOH C . K 4 HOH 47 847 102 HOH HOH C . K 4 HOH 48 848 103 HOH HOH C . K 4 HOH 49 849 104 HOH HOH C . L 4 HOH 1 101 50 HOH HOH P . L 4 HOH 2 102 59 HOH HOH P . #