HEADER HYDROLASE 11-MAY-14 4QCF TITLE CRYSTAL STRUCTURE OF N-TERMINAL MUTANT (V1A) OF AN ALKALI THERMOSTABLE TITLE 2 GH10 XYLANASE FROM BACILLUS SP. NG-27 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALKALINE THERMOSTABLE ENDOXYLANASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 52-405; COMPND 5 EC: 3.2.1.8; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SP. NG-27; SOURCE 3 ORGANISM_TAXID: 65673; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS GH10 XYLANASE, (BETA/ALPHA)8-BARREL, GLYCOSYL HYDROLASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.MAHANTA,A.BHARDWAJ,V.S.REDDY,S.RAMAKUMAR REVDAT 3 20-MAR-24 4QCF 1 REMARK SEQADV LINK REVDAT 2 21-SEP-16 4QCF 1 JRNL REVDAT 1 20-MAY-15 4QCF 0 JRNL AUTH P.MAHANTA,A.BHARDWAJ,K.KUMAR,V.S.REDDY,S.RAMAKUMAR JRNL TITL STRUCTURAL INSIGHTS INTO N-TERMINAL TO C-TERMINAL JRNL TITL 2 INTERACTIONS AND IMPLICATIONS FOR THERMOSTABILITY OF A JRNL TITL 3 (BETA/ALPHA)8-TRIOSEPHOSPHATE ISOMERASE BARREL ENZYME JRNL REF FEBS J. V. 282 3543 2015 JRNL REFN ISSN 1742-464X JRNL PMID 26102498 JRNL DOI 10.1111/FEBS.13355 REMARK 2 REMARK 2 RESOLUTION. 2.26 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.26 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 17094 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.225 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 877 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.26 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.32 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1129 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.1990 REMARK 3 BIN FREE R VALUE SET COUNT : 63 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2893 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 5 REMARK 3 SOLVENT ATOMS : 202 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.25000 REMARK 3 B22 (A**2) : 0.06000 REMARK 3 B33 (A**2) : 1.28000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.22000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.370 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.230 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.133 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.859 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2987 ; 0.005 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2693 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4077 ; 0.955 ; 1.927 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6185 ; 0.718 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 357 ; 5.444 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 173 ;32.890 ;24.798 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 467 ;11.986 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 19 ;15.677 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 425 ; 0.055 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3483 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 732 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1419 ; 0.326 ; 1.433 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1418 ; 0.326 ; 1.433 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1773 ; 0.580 ; 2.149 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 354 REMARK 3 ORIGIN FOR THE GROUP (A): -26.3980 -5.7150 15.6490 REMARK 3 T TENSOR REMARK 3 T11: 0.0173 T22: 0.1347 REMARK 3 T33: 0.0104 T12: 0.0313 REMARK 3 T13: 0.0031 T23: 0.0048 REMARK 3 L TENSOR REMARK 3 L11: 1.5771 L22: 0.6022 REMARK 3 L33: 1.5011 L12: -0.2442 REMARK 3 L13: -0.2897 L23: 0.1525 REMARK 3 S TENSOR REMARK 3 S11: 0.0492 S12: 0.1038 S13: -0.0402 REMARK 3 S21: -0.0553 S22: -0.0191 S23: -0.0181 REMARK 3 S31: 0.0925 S32: 0.2026 S33: -0.0301 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES REMARK 4 REMARK 4 4QCF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085878. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : OSMIC MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17095 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.260 REMARK 200 RESOLUTION RANGE LOW (A) : 65.340 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.03900 REMARK 200 FOR THE DATA SET : 25.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.26 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.38 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.5 REMARK 200 DATA REDUNDANCY IN SHELL : 5.10 REMARK 200 R MERGE FOR SHELL (I) : 0.15300 REMARK 200 R SYM FOR SHELL (I) : 0.15300 REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M NACL, 0.09M MGCL2, 0.05M TRIS HCL REMARK 280 PH 8.5, 15% PEG 8000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 36.78500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 40.06000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 36.78500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 40.06000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 403 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 33 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 49 -26.26 -141.85 REMARK 500 GLU A 259 44.10 -143.07 REMARK 500 ILE A 313 -64.85 -106.01 REMARK 500 ALA A 335 72.53 -157.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 405 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 18 O REMARK 620 2 ASP A 302 O 97.9 REMARK 620 3 LEU A 305 O 77.5 77.8 REMARK 620 4 HOH A 627 O 78.5 88.0 150.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 292 OD1 REMARK 620 2 ARG A 351 O 94.5 REMARK 620 3 ASP A 354 OD1 148.5 83.2 REMARK 620 4 HOH A 501 O 71.4 87.6 77.1 REMARK 620 5 HOH A 570 O 73.6 86.4 137.2 143.8 REMARK 620 6 HOH A 631 O 77.4 170.9 101.5 85.8 95.2 REMARK 620 7 HOH A 697 O 138.9 97.3 72.2 148.1 68.2 91.7 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2F8Q RELATED DB: PDB REMARK 900 RELATED ID: 2FGL RELATED DB: PDB REMARK 900 RELATED ID: 4QCE RELATED DB: PDB REMARK 900 RELATED ID: 4QDM RELATED DB: PDB DBREF 4QCF A 1 354 UNP O30700 O30700_9BACI 52 405 SEQADV 4QCF MET A 0 UNP O30700 EXPRESSION TAG SEQADV 4QCF ALA A 1 UNP O30700 VAL 52 ENGINEERED MUTATION SEQRES 1 A 355 MET ALA GLN PRO PHE ALA TRP GLN VAL ALA SER LEU ALA SEQRES 2 A 355 ASP ARG TYR GLU GLU SER PHE ASP ILE GLY ALA ALA VAL SEQRES 3 A 355 GLU PRO HIS GLN LEU ASN GLY ARG GLN GLY LYS VAL LEU SEQRES 4 A 355 LYS HIS HIS TYR ASN SER ILE VAL ALA GLU ASN ALA MET SEQRES 5 A 355 LYS PRO ILE SER LEU GLN PRO GLU GLU GLY VAL PHE THR SEQRES 6 A 355 TRP ASP GLY ALA ASP ALA ILE VAL GLU PHE ALA ARG LYS SEQRES 7 A 355 ASN ASN MET ASN LEU ARG PHE HIS THR LEU VAL TRP HIS SEQRES 8 A 355 ASN GLN VAL PRO ASP TRP PHE PHE LEU ASP GLU GLU GLY SEQRES 9 A 355 ASN PRO MET VAL GLU GLU THR ASN GLU ALA LYS ARG GLN SEQRES 10 A 355 ALA ASN LYS GLU LEU LEU LEU GLU ARG LEU GLU THR HIS SEQRES 11 A 355 ILE LYS THR VAL VAL GLU ARG TYR LYS ASP ASP VAL THR SEQRES 12 A 355 ALA TRP ASP VAL VAL ASN GLU VAL VAL ASP ASP GLY THR SEQRES 13 A 355 PRO ASN GLU ARG GLY LEU ARG GLU SER VAL TRP TYR GLN SEQRES 14 A 355 ILE THR GLY ASP GLU TYR ILE ARG VAL ALA PHE GLU THR SEQRES 15 A 355 ALA ARG LYS TYR ALA GLY GLU ASP ALA LYS LEU PHE ILE SEQRES 16 A 355 ASN ASP TYR ASN THR GLU VAL THR PRO LYS ARG ASP HIS SEQRES 17 A 355 LEU TYR ASN LEU VAL GLN ASP LEU LEU ALA ASP GLY VAL SEQRES 18 A 355 PRO ILE ASP GLY VAL GLY HIS GLN ALA HIS ILE GLN ILE SEQRES 19 A 355 ASP TRP PRO THR ILE ASP GLU ILE ARG THR SER MET GLU SEQRES 20 A 355 MET PHE ALA GLY LEU GLY LEU ASP ASN GLN VAL THR GLU SEQRES 21 A 355 LEU ASP VAL SER LEU TYR GLY TRP PRO PRO ARG PRO ALA SEQRES 22 A 355 PHE PRO THR TYR ASP ALA ILE PRO GLN GLU ARG PHE GLN SEQRES 23 A 355 ALA GLN ALA ASP ARG TYR ASN GLN LEU PHE GLU LEU TYR SEQRES 24 A 355 GLU GLU LEU ASP ALA ASP LEU SER SER VAL THR PHE TRP SEQRES 25 A 355 GLY ILE ALA ASP ASN HIS THR TRP LEU ASP ASP ARG ALA SEQRES 26 A 355 ARG GLU TYR ASN ASP GLY VAL GLY LYS ASP ALA PRO PHE SEQRES 27 A 355 VAL PHE ASP PRO ASN TYR ARG VAL LYS PRO ALA PHE TRP SEQRES 28 A 355 ARG ILE ILE ASP HET MG A 401 1 HET CL A 402 1 HET CL A 403 1 HET CL A 404 1 HET NA A 405 1 HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION FORMUL 2 MG MG 2+ FORMUL 3 CL 3(CL 1-) FORMUL 6 NA NA 1+ FORMUL 7 HOH *202(H2 O) HELIX 1 1 PHE A 4 VAL A 8 5 5 HELIX 2 2 SER A 10 TYR A 15 1 6 HELIX 3 3 GLU A 26 LEU A 30 5 5 HELIX 4 4 ASN A 31 TYR A 42 1 12 HELIX 5 5 LYS A 52 GLN A 57 1 6 HELIX 6 6 TRP A 65 ASN A 78 1 14 HELIX 7 7 PRO A 94 LEU A 99 5 6 HELIX 8 8 PRO A 105 GLU A 109 5 5 HELIX 9 9 ASN A 111 LYS A 138 1 28 HELIX 10 10 SER A 164 GLY A 171 1 8 HELIX 11 11 ASP A 172 GLY A 187 1 16 HELIX 12 12 PRO A 203 ASP A 218 1 16 HELIX 13 13 THR A 237 LEU A 251 1 15 HELIX 14 14 PRO A 280 LEU A 301 1 22 HELIX 15 15 THR A 318 TYR A 327 1 10 HELIX 16 16 LYS A 346 ASP A 354 1 9 SHEET 1 A10 HIS A 230 ILE A 231 0 SHEET 2 A10 ASP A 254 VAL A 262 1 O ASP A 261 N ILE A 231 SHEET 3 A10 LEU A 305 PHE A 310 1 O THR A 309 N VAL A 257 SHEET 4 A10 ASP A 20 VAL A 25 1 N GLY A 22 O VAL A 308 SHEET 5 A10 SER A 44 ALA A 47 1 O VAL A 46 N VAL A 25 SHEET 6 A10 ASN A 81 PHE A 84 1 O ARG A 83 N ILE A 45 SHEET 7 A10 ALA A 143 ASN A 148 1 O ALA A 143 N PHE A 84 SHEET 8 A10 LEU A 192 ASP A 196 1 O PHE A 193 N TRP A 144 SHEET 9 A10 GLY A 224 HIS A 227 1 O GLY A 226 N ILE A 194 SHEET 10 A10 ASP A 254 VAL A 262 1 O GLN A 256 N HIS A 227 LINK O SER A 18 NA NA A 405 1555 1555 2.47 LINK OD1 ASN A 292 MG MG A 401 1555 1555 2.22 LINK O ASP A 302 NA NA A 405 1555 1555 2.27 LINK O LEU A 305 NA NA A 405 1555 1555 2.46 LINK O ARG A 351 MG MG A 401 1555 1555 2.12 LINK OD1 ASP A 354 MG MG A 401 1555 1555 2.48 LINK MG MG A 401 O HOH A 501 1555 1555 2.57 LINK MG MG A 401 O HOH A 570 1555 1555 2.40 LINK MG MG A 401 O HOH A 631 1555 1555 2.24 LINK MG MG A 401 O HOH A 697 1555 1555 2.28 LINK NA NA A 405 O HOH A 627 1555 1555 2.50 CISPEP 1 HIS A 85 THR A 86 0 -4.53 CISPEP 2 THR A 202 PRO A 203 0 5.55 CISPEP 3 TRP A 235 PRO A 236 0 -7.93 CISPEP 4 TRP A 267 PRO A 268 0 -0.20 CISPEP 5 ARG A 270 PRO A 271 0 -6.13 SITE 1 AC1 7 ASN A 292 ARG A 351 ASP A 354 HOH A 501 SITE 2 AC1 7 HOH A 570 HOH A 631 HOH A 697 SITE 1 AC2 1 ASP A 95 SITE 1 AC3 1 GLN A 285 SITE 1 AC4 3 ASP A 289 ASN A 292 GLN A 293 SITE 1 AC5 4 SER A 18 ASP A 302 LEU A 305 HOH A 627 CRYST1 73.570 80.120 69.900 90.00 110.81 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013592 0.000000 0.005166 0.00000 SCALE2 0.000000 0.012481 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015305 0.00000