HEADER HYDROLASE 19-MAY-14 4QEZ TITLE CRYSTAL STRUCTURE OF 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE TITLE 2 NUCLEOSIDASE FROM BACILLUS ANTHRACIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE; COMPND 3 CHAIN: B, A, C; COMPND 4 SYNONYM: MTA/SAH NUCLEOSIDASE, MTAN, 5'-METHYLTHIOADENOSINE COMPND 5 NUCLEOSIDASE, MTA NUCLEOSIDASE, S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE, COMPND 6 ADOHCY NUCLEOSIDASE, SAH NUCLEOSIDASE, SRH NUCLEOSIDASE; COMPND 7 EC: 3.2.2.9; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_COMMON: ANTHRAX, ANTHRAX BACTERIUM; SOURCE 4 ORGANISM_TAXID: 1392; SOURCE 5 STRAIN: STERNE; SOURCE 6 GENE: MTNN, BA_4602, GBAA_4602, BAS4270; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28(B) KEYWDS AMINO-ACID BIOSYNTHESIS, METHIONINE BIOSYNTHESIS, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR K.F.TARIQUE,S.DEVI,S.A.ABDUL REHMAN,S.GOURINATH REVDAT 3 08-NOV-23 4QEZ 1 REMARK SEQADV REVDAT 2 07-FEB-18 4QEZ 1 REMARK REVDAT 1 18-JUN-14 4QEZ 0 JRNL AUTH K.F.TARIQUE,S.DEVI,S.A.ABDUL REHMAN,S.GOURINATH JRNL TITL CRYSTAL STRUCTURE OF JRNL TITL 2 5'-METHYLTHIOADENOSINE/S-ADENOSYLHOMOCYSTEINE NUCLEOSIDASE JRNL TITL 3 FROM BACILLUS ANTHRACIS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.49 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 94.9 REMARK 3 NUMBER OF REFLECTIONS : 15438 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 819 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.71 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.78 REMARK 3 REFLECTION IN BIN (WORKING SET) : 847 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 69.73 REMARK 3 BIN R VALUE (WORKING SET) : 0.3200 REMARK 3 BIN FREE R VALUE SET COUNT : 40 REMARK 3 BIN FREE R VALUE : 0.3940 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 5265 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.04 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.01000 REMARK 3 B22 (A**2) : -1.95000 REMARK 3 B33 (A**2) : 1.03000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.60000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.446 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.362 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 40.202 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.916 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.895 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 5405 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 5222 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 7301 ; 1.176 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11995 ; 1.048 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 679 ; 6.147 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 246 ;34.796 ;25.041 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 931 ;16.528 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;20.202 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 837 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6123 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1204 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2734 ; 0.893 ; 5.544 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2733 ; 0.893 ; 5.544 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3407 ; 1.613 ; 8.313 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3408 ; 1.613 ; 8.313 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2568 ; 0.562 ; 5.667 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2569 ; 0.562 ; 5.667 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3767 ; 1.093 ; 8.465 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5735 ; 2.634 ;43.119 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5735 ; 2.634 ;43.119 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 3 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 B 2 229 A 2 229 13212 0.11 0.05 REMARK 3 2 B 2 237 C 2 237 13567 0.11 0.05 REMARK 3 3 A 2 229 C 2 229 13228 0.11 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 237 REMARK 3 ORIGIN FOR THE GROUP (A): 42.4780 -22.6610 10.7410 REMARK 3 T TENSOR REMARK 3 T11: 0.0184 T22: 0.2773 REMARK 3 T33: 0.1017 T12: -0.0137 REMARK 3 T13: -0.0088 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 2.8701 L22: 2.4284 REMARK 3 L33: 2.9467 L12: -0.9789 REMARK 3 L13: 0.7051 L23: 0.1690 REMARK 3 S TENSOR REMARK 3 S11: -0.0583 S12: 0.0625 S13: -0.0525 REMARK 3 S21: 0.1449 S22: -0.0148 S23: -0.2633 REMARK 3 S31: 0.1452 S32: 0.2719 S33: 0.0731 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 230 REMARK 3 ORIGIN FOR THE GROUP (A): 16.0590 -11.3760 10.2050 REMARK 3 T TENSOR REMARK 3 T11: 0.0298 T22: 0.6377 REMARK 3 T33: 0.1032 T12: 0.0850 REMARK 3 T13: -0.0335 T23: -0.0871 REMARK 3 L TENSOR REMARK 3 L11: 2.2052 L22: 1.8068 REMARK 3 L33: 2.7533 L12: -1.0458 REMARK 3 L13: 0.5309 L23: 0.3740 REMARK 3 S TENSOR REMARK 3 S11: -0.1373 S12: -0.1452 S13: 0.1259 REMARK 3 S21: -0.0183 S22: -0.0106 S23: 0.0767 REMARK 3 S31: -0.2503 S32: -1.0067 S33: 0.1480 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 2 C 237 REMARK 3 ORIGIN FOR THE GROUP (A): 13.1200 -49.0390 -13.4320 REMARK 3 T TENSOR REMARK 3 T11: 0.1564 T22: 0.3634 REMARK 3 T33: 0.2134 T12: 0.0173 REMARK 3 T13: -0.0061 T23: -0.0078 REMARK 3 L TENSOR REMARK 3 L11: 2.7328 L22: 1.6222 REMARK 3 L33: 4.0576 L12: 0.5194 REMARK 3 L13: 1.8629 L23: 0.3448 REMARK 3 S TENSOR REMARK 3 S11: 0.0702 S12: -0.0537 S13: -0.0298 REMARK 3 S21: 0.1113 S22: -0.0477 S23: -0.1895 REMARK 3 S31: 0.2510 S32: 0.2870 S33: -0.0225 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.00 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4QEZ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085970. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : BRUKER AXS MICROSTAR REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16291 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.08000 REMARK 200 FOR THE DATA SET : 21.6400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 75.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.34000 REMARK 200 FOR SHELL : 2.549 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3DP9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.99 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M AMMONIUM SULFATE, 0.2M MGCL2, TRIS REMARK 280 PH 8.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 90.63450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.31750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 90.63450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 37.31750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17340 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4210 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 18220 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -1.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 4.28014 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -46.49139 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 ALA B 135 REMARK 465 GLU B 136 REMARK 465 GLU B 137 REMARK 465 ASN B 138 REMARK 465 ILE B 139 REMARK 465 HIS B 238 REMARK 465 HIS B 239 REMARK 465 MET A 1 REMARK 465 GLN A 134 REMARK 465 ALA A 135 REMARK 465 GLU A 136 REMARK 465 GLU A 137 REMARK 465 ASN A 138 REMARK 465 ILE A 139 REMARK 465 LYS A 231 REMARK 465 LEU A 232 REMARK 465 GLU A 233 REMARK 465 HIS A 234 REMARK 465 HIS A 235 REMARK 465 HIS A 236 REMARK 465 HIS A 237 REMARK 465 HIS A 238 REMARK 465 HIS A 239 REMARK 465 MET C 1 REMARK 465 ALA C 135 REMARK 465 GLU C 136 REMARK 465 GLU C 137 REMARK 465 ASN C 138 REMARK 465 ILE C 139 REMARK 465 HIS C 238 REMARK 465 HIS C 239 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 150 38.09 -86.24 REMARK 500 ASN B 168 81.08 -154.97 REMARK 500 GLU B 173 -149.07 -155.37 REMARK 500 GLU B 175 -34.74 -137.51 REMARK 500 LYS B 202 -94.32 -90.04 REMARK 500 GLU B 229 19.07 -65.91 REMARK 500 HIS B 236 -80.64 -75.47 REMARK 500 ASP A 150 38.19 -85.92 REMARK 500 ASN A 168 80.06 -155.52 REMARK 500 GLU A 173 -148.92 -156.07 REMARK 500 GLU A 175 -34.90 -138.05 REMARK 500 ASP C 150 37.76 -85.98 REMARK 500 ASN C 168 80.63 -155.66 REMARK 500 GLU C 173 -148.64 -156.05 REMARK 500 GLU C 175 -34.76 -137.92 REMARK 500 HIS C 234 -60.79 -108.06 REMARK 500 HIS C 236 -79.68 -76.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LEU B 230 LYS B 231 -40.07 REMARK 500 LEU C 232 GLU C 233 137.99 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADE B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADE A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADE C 302 DBREF 4QEZ B 1 231 UNP Q81LL4 MTNN_BACAN 1 231 DBREF 4QEZ A 1 231 UNP Q81LL4 MTNN_BACAN 1 231 DBREF 4QEZ C 1 231 UNP Q81LL4 MTNN_BACAN 1 231 SEQADV 4QEZ LEU B 232 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ GLU B 233 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS B 234 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS B 235 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS B 236 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS B 237 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS B 238 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS B 239 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ LEU A 232 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ GLU A 233 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS A 234 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS A 235 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS A 236 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS A 237 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS A 238 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS A 239 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ LEU C 232 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ GLU C 233 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS C 234 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS C 235 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS C 236 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS C 237 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS C 238 UNP Q81LL4 EXPRESSION TAG SEQADV 4QEZ HIS C 239 UNP Q81LL4 EXPRESSION TAG SEQRES 1 B 239 MET ARG ILE ALA VAL ILE GLY ALA MET GLU GLU GLU VAL SEQRES 2 B 239 ARG ILE LEU ARG ASP LYS LEU GLU GLN ALA GLU THR GLU SEQRES 3 B 239 THR VAL ALA GLY CYS GLU PHE THR LYS GLY GLN LEU ALA SEQRES 4 B 239 GLY HIS GLU VAL ILE LEU LEU LYS SER GLY ILE GLY LYS SEQRES 5 B 239 VAL ASN ALA ALA MET SER THR THR ILE LEU LEU GLU ARG SEQRES 6 B 239 TYR LYS PRO GLU LYS VAL ILE ASN THR GLY SER ALA GLY SEQRES 7 B 239 GLY PHE HIS HIS SER LEU ASN VAL GLY ASP VAL VAL ILE SEQRES 8 B 239 SER THR GLU VAL ARG HIS HIS ASP VAL ASP VAL THR ALA SEQRES 9 B 239 PHE ASN TYR GLU TYR GLY GLN VAL PRO GLY MET PRO PRO SEQRES 10 B 239 GLY PHE LYS ALA ASP GLU ALA LEU VAL ALA LEU ALA GLU SEQRES 11 B 239 LYS CYS MET GLN ALA GLU GLU ASN ILE GLN VAL VAL LYS SEQRES 12 B 239 GLY MET ILE ALA THR GLY ASP SER PHE MET SER ASP PRO SEQRES 13 B 239 ASN ARG VAL ALA ALA ILE ARG ASP LYS PHE GLU ASN LEU SEQRES 14 B 239 TYR ALA VAL GLU MET GLU ALA ALA ALA VAL ALA GLN VAL SEQRES 15 B 239 CYS HIS GLN TYR GLU VAL PRO PHE VAL ILE ILE ARG ALA SEQRES 16 B 239 LEU SER ASP ILE ALA GLY LYS GLU SER ASN VAL SER PHE SEQRES 17 B 239 ASP GLN PHE LEU ASP GLN ALA ALA LEU HIS SER THR ASN SEQRES 18 B 239 PHE ILE VAL LYS VAL LEU GLU GLU LEU LYS LEU GLU HIS SEQRES 19 B 239 HIS HIS HIS HIS HIS SEQRES 1 A 239 MET ARG ILE ALA VAL ILE GLY ALA MET GLU GLU GLU VAL SEQRES 2 A 239 ARG ILE LEU ARG ASP LYS LEU GLU GLN ALA GLU THR GLU SEQRES 3 A 239 THR VAL ALA GLY CYS GLU PHE THR LYS GLY GLN LEU ALA SEQRES 4 A 239 GLY HIS GLU VAL ILE LEU LEU LYS SER GLY ILE GLY LYS SEQRES 5 A 239 VAL ASN ALA ALA MET SER THR THR ILE LEU LEU GLU ARG SEQRES 6 A 239 TYR LYS PRO GLU LYS VAL ILE ASN THR GLY SER ALA GLY SEQRES 7 A 239 GLY PHE HIS HIS SER LEU ASN VAL GLY ASP VAL VAL ILE SEQRES 8 A 239 SER THR GLU VAL ARG HIS HIS ASP VAL ASP VAL THR ALA SEQRES 9 A 239 PHE ASN TYR GLU TYR GLY GLN VAL PRO GLY MET PRO PRO SEQRES 10 A 239 GLY PHE LYS ALA ASP GLU ALA LEU VAL ALA LEU ALA GLU SEQRES 11 A 239 LYS CYS MET GLN ALA GLU GLU ASN ILE GLN VAL VAL LYS SEQRES 12 A 239 GLY MET ILE ALA THR GLY ASP SER PHE MET SER ASP PRO SEQRES 13 A 239 ASN ARG VAL ALA ALA ILE ARG ASP LYS PHE GLU ASN LEU SEQRES 14 A 239 TYR ALA VAL GLU MET GLU ALA ALA ALA VAL ALA GLN VAL SEQRES 15 A 239 CYS HIS GLN TYR GLU VAL PRO PHE VAL ILE ILE ARG ALA SEQRES 16 A 239 LEU SER ASP ILE ALA GLY LYS GLU SER ASN VAL SER PHE SEQRES 17 A 239 ASP GLN PHE LEU ASP GLN ALA ALA LEU HIS SER THR ASN SEQRES 18 A 239 PHE ILE VAL LYS VAL LEU GLU GLU LEU LYS LEU GLU HIS SEQRES 19 A 239 HIS HIS HIS HIS HIS SEQRES 1 C 239 MET ARG ILE ALA VAL ILE GLY ALA MET GLU GLU GLU VAL SEQRES 2 C 239 ARG ILE LEU ARG ASP LYS LEU GLU GLN ALA GLU THR GLU SEQRES 3 C 239 THR VAL ALA GLY CYS GLU PHE THR LYS GLY GLN LEU ALA SEQRES 4 C 239 GLY HIS GLU VAL ILE LEU LEU LYS SER GLY ILE GLY LYS SEQRES 5 C 239 VAL ASN ALA ALA MET SER THR THR ILE LEU LEU GLU ARG SEQRES 6 C 239 TYR LYS PRO GLU LYS VAL ILE ASN THR GLY SER ALA GLY SEQRES 7 C 239 GLY PHE HIS HIS SER LEU ASN VAL GLY ASP VAL VAL ILE SEQRES 8 C 239 SER THR GLU VAL ARG HIS HIS ASP VAL ASP VAL THR ALA SEQRES 9 C 239 PHE ASN TYR GLU TYR GLY GLN VAL PRO GLY MET PRO PRO SEQRES 10 C 239 GLY PHE LYS ALA ASP GLU ALA LEU VAL ALA LEU ALA GLU SEQRES 11 C 239 LYS CYS MET GLN ALA GLU GLU ASN ILE GLN VAL VAL LYS SEQRES 12 C 239 GLY MET ILE ALA THR GLY ASP SER PHE MET SER ASP PRO SEQRES 13 C 239 ASN ARG VAL ALA ALA ILE ARG ASP LYS PHE GLU ASN LEU SEQRES 14 C 239 TYR ALA VAL GLU MET GLU ALA ALA ALA VAL ALA GLN VAL SEQRES 15 C 239 CYS HIS GLN TYR GLU VAL PRO PHE VAL ILE ILE ARG ALA SEQRES 16 C 239 LEU SER ASP ILE ALA GLY LYS GLU SER ASN VAL SER PHE SEQRES 17 C 239 ASP GLN PHE LEU ASP GLN ALA ALA LEU HIS SER THR ASN SEQRES 18 C 239 PHE ILE VAL LYS VAL LEU GLU GLU LEU LYS LEU GLU HIS SEQRES 19 C 239 HIS HIS HIS HIS HIS HET ADE B 301 10 HET TRS B 302 8 HET ADE A 301 10 HET TRS A 302 8 HET TRS C 301 8 HET ADE C 302 10 HETNAM ADE ADENINE HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETSYN TRS TRIS BUFFER FORMUL 4 ADE 3(C5 H5 N5) FORMUL 5 TRS 3(C4 H12 N O3 1+) HELIX 1 1 MET B 9 LEU B 20 1 12 HELIX 2 2 GLY B 51 TYR B 66 1 16 HELIX 3 3 VAL B 102 ASN B 106 5 5 HELIX 4 4 ASP B 122 MET B 133 1 12 HELIX 5 5 ASP B 155 ASP B 164 1 10 HELIX 6 6 GLU B 175 GLU B 187 1 13 HELIX 7 7 GLU B 203 GLU B 229 1 27 HELIX 8 8 MET A 9 LEU A 20 1 12 HELIX 9 9 GLY A 51 TYR A 66 1 16 HELIX 10 10 VAL A 102 ASN A 106 5 5 HELIX 11 11 ASP A 122 CYS A 132 1 11 HELIX 12 12 ASP A 155 ASP A 164 1 10 HELIX 13 13 GLU A 175 GLU A 187 1 13 HELIX 14 14 GLU A 203 LEU A 230 1 28 HELIX 15 15 MET C 9 LEU C 20 1 12 HELIX 16 16 GLY C 51 TYR C 66 1 16 HELIX 17 17 VAL C 102 ASN C 106 5 5 HELIX 18 18 ASP C 122 CYS C 132 1 11 HELIX 19 19 ASP C 155 ASP C 164 1 10 HELIX 20 20 GLU C 175 GLU C 187 1 13 HELIX 21 21 GLU C 203 LYS C 231 1 29 SHEET 1 A11 GLU B 21 VAL B 28 0 SHEET 2 A11 CYS B 31 LEU B 38 -1 O GLN B 37 N GLU B 21 SHEET 3 A11 HIS B 41 LYS B 47 -1 O LEU B 45 N THR B 34 SHEET 4 A11 ILE B 3 GLY B 7 1 N GLY B 7 O LEU B 46 SHEET 5 A11 LYS B 70 ASN B 73 1 O ILE B 72 N ALA B 4 SHEET 6 A11 PHE B 190 ILE B 199 1 O ILE B 193 N ASN B 73 SHEET 7 A11 SER B 76 GLY B 79 1 N GLY B 79 O ASP B 198 SHEET 8 A11 LEU B 169 GLU B 173 -1 O VAL B 172 N GLY B 78 SHEET 9 A11 VAL B 141 THR B 148 1 N MET B 145 O TYR B 170 SHEET 10 A11 VAL B 89 HIS B 97 1 N ILE B 91 O VAL B 142 SHEET 11 A11 PHE B 119 LYS B 120 -1 O PHE B 119 N VAL B 95 SHEET 1 B 8 GLU B 21 VAL B 28 0 SHEET 2 B 8 CYS B 31 LEU B 38 -1 O GLN B 37 N GLU B 21 SHEET 3 B 8 HIS B 41 LYS B 47 -1 O LEU B 45 N THR B 34 SHEET 4 B 8 ILE B 3 GLY B 7 1 N GLY B 7 O LEU B 46 SHEET 5 B 8 LYS B 70 ASN B 73 1 O ILE B 72 N ALA B 4 SHEET 6 B 8 PHE B 190 ILE B 199 1 O ILE B 193 N ASN B 73 SHEET 7 B 8 VAL B 89 HIS B 97 -1 N VAL B 90 O ARG B 194 SHEET 8 B 8 PHE B 119 LYS B 120 -1 O PHE B 119 N VAL B 95 SHEET 1 C11 GLU A 21 VAL A 28 0 SHEET 2 C11 CYS A 31 LEU A 38 -1 O GLN A 37 N GLU A 21 SHEET 3 C11 HIS A 41 LYS A 47 -1 O LEU A 45 N THR A 34 SHEET 4 C11 ILE A 3 GLY A 7 1 N GLY A 7 O LEU A 46 SHEET 5 C11 LYS A 70 ASN A 73 1 O ILE A 72 N ILE A 6 SHEET 6 C11 PHE A 190 ILE A 199 1 O ILE A 193 N ASN A 73 SHEET 7 C11 SER A 76 GLY A 79 1 N GLY A 79 O ASP A 198 SHEET 8 C11 LEU A 169 GLU A 173 -1 O VAL A 172 N GLY A 78 SHEET 9 C11 VAL A 141 THR A 148 1 N MET A 145 O TYR A 170 SHEET 10 C11 VAL A 89 HIS A 97 1 N ILE A 91 O VAL A 142 SHEET 11 C11 PHE A 119 LYS A 120 -1 O PHE A 119 N VAL A 95 SHEET 1 D 8 GLU A 21 VAL A 28 0 SHEET 2 D 8 CYS A 31 LEU A 38 -1 O GLN A 37 N GLU A 21 SHEET 3 D 8 HIS A 41 LYS A 47 -1 O LEU A 45 N THR A 34 SHEET 4 D 8 ILE A 3 GLY A 7 1 N GLY A 7 O LEU A 46 SHEET 5 D 8 LYS A 70 ASN A 73 1 O ILE A 72 N ILE A 6 SHEET 6 D 8 PHE A 190 ILE A 199 1 O ILE A 193 N ASN A 73 SHEET 7 D 8 VAL A 89 HIS A 97 -1 N VAL A 90 O ARG A 194 SHEET 8 D 8 PHE A 119 LYS A 120 -1 O PHE A 119 N VAL A 95 SHEET 1 E11 GLU C 21 VAL C 28 0 SHEET 2 E11 CYS C 31 LEU C 38 -1 O GLN C 37 N GLU C 21 SHEET 3 E11 HIS C 41 LYS C 47 -1 O LEU C 45 N THR C 34 SHEET 4 E11 ILE C 3 GLY C 7 1 N ILE C 3 O GLU C 42 SHEET 5 E11 LYS C 70 ASN C 73 1 O ILE C 72 N ILE C 6 SHEET 6 E11 PHE C 190 ILE C 199 1 O ILE C 193 N ASN C 73 SHEET 7 E11 SER C 76 GLY C 79 1 N GLY C 79 O ASP C 198 SHEET 8 E11 LEU C 169 GLU C 173 -1 O VAL C 172 N GLY C 78 SHEET 9 E11 VAL C 141 THR C 148 1 N MET C 145 O TYR C 170 SHEET 10 E11 VAL C 89 HIS C 97 1 N ILE C 91 O VAL C 142 SHEET 11 E11 PHE C 119 LYS C 120 -1 O PHE C 119 N VAL C 95 SHEET 1 F 8 GLU C 21 VAL C 28 0 SHEET 2 F 8 CYS C 31 LEU C 38 -1 O GLN C 37 N GLU C 21 SHEET 3 F 8 HIS C 41 LYS C 47 -1 O LEU C 45 N THR C 34 SHEET 4 F 8 ILE C 3 GLY C 7 1 N ILE C 3 O GLU C 42 SHEET 5 F 8 LYS C 70 ASN C 73 1 O ILE C 72 N ILE C 6 SHEET 6 F 8 PHE C 190 ILE C 199 1 O ILE C 193 N ASN C 73 SHEET 7 F 8 VAL C 89 HIS C 97 -1 N VAL C 90 O ARG C 194 SHEET 8 F 8 PHE C 119 LYS C 120 -1 O PHE C 119 N VAL C 95 SITE 1 AC1 9 ALA B 77 GLY B 78 PHE B 152 MET B 153 SITE 2 AC1 9 VAL B 172 GLU B 173 SER B 197 ASP B 198 SITE 3 AC1 9 TRS B 302 SITE 1 AC2 9 ALA B 8 GLU B 12 SER B 76 GLU B 173 SITE 2 AC2 9 MET B 174 GLU B 175 ARG B 194 ADE B 301 SITE 3 AC2 9 HIS C 236 SITE 1 AC3 9 ALA A 77 GLY A 78 PHE A 152 MET A 153 SITE 2 AC3 9 VAL A 172 GLU A 173 SER A 197 ASP A 198 SITE 3 AC3 9 TRS A 302 SITE 1 AC4 10 ALA A 8 GLU A 12 SER A 76 GLU A 173 SITE 2 AC4 10 MET A 174 GLU A 175 ARG A 194 PHE A 208 SITE 3 AC4 10 ADE A 301 HIS B 236 SITE 1 AC5 9 ALA C 8 GLU C 12 SER C 76 GLU C 173 SITE 2 AC5 9 MET C 174 GLU C 175 ARG C 194 PHE C 208 SITE 3 AC5 9 ADE C 302 SITE 1 AC6 10 ALA C 77 GLY C 78 PHE C 152 MET C 153 SITE 2 AC6 10 VAL C 172 GLU C 173 SER C 197 ASP C 198 SITE 3 AC6 10 PHE C 208 TRS C 301 CRYST1 181.269 74.635 46.688 90.00 95.26 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005517 0.000000 0.000508 0.00000 SCALE2 0.000000 0.013399 0.000000 0.00000 SCALE3 0.000000 0.000000 0.021509 0.00000