HEADER TRANSCRIPTION 19-MAY-14 4QF2 TITLE CRYSTAL STRUCTURE OF HUMAN BAZ2A PHD ZINC FINGER IN THE FREE FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2A; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: UNP RESIDUES 1673-1728; COMPND 5 SYNONYM: TRANSCRIPTION TERMINATION FACTOR I-INTERACTING PROTEIN 5, COMPND 6 TTF-I-INTERACTING PROTEIN 5, TIP5, HWALP3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: BAZ2A, KIAA0314, TIP5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS BROMODOMAIN ADJACENT TO ZINC FINGER DOMAIN PROTEIN 2A, TRANSCRIPTION KEYWDS 2 TERMINATION FACTOR I-INTERACTING PROTEIN 5, TTF-I-INTERACTING KEYWDS 3 PROTEIN 5, TRANSCRIPTION EXPDTA X-RAY DIFFRACTION AUTHOR C.TALLANT,L.OVERVOORDE,I.VAN MOLLE,D.Y.CHIRGADZE,A.CIULLI REVDAT 5 03-APR-24 4QF2 1 REMARK REVDAT 4 28-FEB-24 4QF2 1 REMARK SEQADV LINK REVDAT 3 22-APR-15 4QF2 1 JRNL REVDAT 2 04-FEB-15 4QF2 1 REMARK REVDAT 1 02-JUL-14 4QF2 0 JRNL AUTH C.TALLANT,E.VALENTINI,O.FEDOROV,L.OVERVOORDE,F.M.FERGUSON, JRNL AUTH 2 P.FILIPPAKOPOULOS,D.I.SVERGUN,S.KNAPP,A.CIULLI JRNL TITL MOLECULAR BASIS OF HISTONE TAIL RECOGNITION BY HUMAN TIP5 JRNL TITL 2 PHD FINGER AND BROMODOMAIN OF THE CHROMATIN REMODELING JRNL TITL 3 COMPLEX NORC. JRNL REF STRUCTURE V. 23 80 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 25533489 JRNL DOI 10.1016/J.STR.2014.10.017 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 58.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 27298 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1468 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1865 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.95 REMARK 3 BIN R VALUE (WORKING SET) : 0.2110 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.2500 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1635 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.47000 REMARK 3 B22 (A**2) : 0.47000 REMARK 3 B33 (A**2) : -0.94000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.094 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.096 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.059 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.001 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.950 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1684 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1548 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2271 ; 1.926 ; 1.968 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3580 ; 0.891 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 205 ; 5.789 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 79 ;29.149 ;23.924 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 288 ;13.060 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;14.028 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 244 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1881 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 379 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1676 A 1728 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5238 32.8325 19.7531 REMARK 3 T TENSOR REMARK 3 T11: 0.0386 T22: 0.0620 REMARK 3 T33: 0.0412 T12: 0.0189 REMARK 3 T13: -0.0216 T23: -0.0146 REMARK 3 L TENSOR REMARK 3 L11: 1.2153 L22: 0.6421 REMARK 3 L33: 1.9770 L12: -0.8702 REMARK 3 L13: 1.1586 L23: -0.7217 REMARK 3 S TENSOR REMARK 3 S11: 0.1123 S12: 0.1510 S13: -0.0944 REMARK 3 S21: -0.0705 S22: -0.0871 S23: 0.0735 REMARK 3 S31: 0.1217 S32: 0.1854 S33: -0.0253 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1676 B 1726 REMARK 3 ORIGIN FOR THE GROUP (A): 39.4527 24.8960 45.4485 REMARK 3 T TENSOR REMARK 3 T11: 0.0123 T22: 0.0786 REMARK 3 T33: 0.0571 T12: -0.0139 REMARK 3 T13: 0.0073 T23: 0.0267 REMARK 3 L TENSOR REMARK 3 L11: 0.5341 L22: 1.1766 REMARK 3 L33: 1.7243 L12: -0.1681 REMARK 3 L13: -0.5738 L23: 0.3163 REMARK 3 S TENSOR REMARK 3 S11: -0.0006 S12: -0.1144 S13: -0.0189 REMARK 3 S21: -0.0503 S22: -0.0737 S23: -0.0899 REMARK 3 S31: -0.0213 S32: 0.1885 S33: 0.0744 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1676 C 1727 REMARK 3 ORIGIN FOR THE GROUP (A): 11.0841 38.7973 34.5003 REMARK 3 T TENSOR REMARK 3 T11: 0.0636 T22: 0.0343 REMARK 3 T33: 0.0461 T12: 0.0056 REMARK 3 T13: -0.0061 T23: 0.0086 REMARK 3 L TENSOR REMARK 3 L11: 0.5493 L22: 0.8966 REMARK 3 L33: 0.4970 L12: 0.2268 REMARK 3 L13: -0.2339 L23: -0.3654 REMARK 3 S TENSOR REMARK 3 S11: -0.0447 S12: 0.0381 S13: 0.0210 REMARK 3 S21: 0.0707 S22: 0.0591 S23: 0.0096 REMARK 3 S31: 0.0666 S32: 0.0480 S33: -0.0144 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1676 D 1728 REMARK 3 ORIGIN FOR THE GROUP (A): 33.5936 23.8062 30.2576 REMARK 3 T TENSOR REMARK 3 T11: 0.0684 T22: 0.0336 REMARK 3 T33: 0.0493 T12: -0.0095 REMARK 3 T13: 0.0298 T23: 0.0147 REMARK 3 L TENSOR REMARK 3 L11: 1.4303 L22: 0.5330 REMARK 3 L33: 1.2110 L12: 0.6757 REMARK 3 L13: -0.3852 L23: -0.6681 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: 0.1039 S13: -0.0513 REMARK 3 S21: -0.0546 S22: -0.0059 S23: -0.0428 REMARK 3 S31: 0.0937 S32: 0.0894 S33: 0.0592 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4QF2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 21-MAY-14. REMARK 100 THE DEPOSITION ID IS D_1000085973. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.2822 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27299 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 58.250 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.80 REMARK 200 R MERGE (I) : 0.06300 REMARK 200 R SYM (I) : 0.06300 REMARK 200 FOR THE DATA SET : 24.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.51400 REMARK 200 R SYM FOR SHELL (I) : 0.15300 REMARK 200 FOR SHELL : 5.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: ARP/WARP AUTOBUILDING MODEL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2M NA/K PHOSPHATE, PH 8, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 49.53050 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 36.00700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 36.00700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 74.29575 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 36.00700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 36.00700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.76525 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 36.00700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 36.00700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 74.29575 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 36.00700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 36.00700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.76525 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 49.53050 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1630 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6940 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 6960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 1671 REMARK 465 MET A 1672 REMARK 465 SER A 1673 REMARK 465 VAL A 1674 REMARK 465 ASN A 1675 REMARK 465 HIS B 1671 REMARK 465 MET B 1672 REMARK 465 SER B 1673 REMARK 465 VAL B 1674 REMARK 465 ASN B 1675 REMARK 465 GLN B 1727 REMARK 465 VAL B 1728 REMARK 465 HIS C 1671 REMARK 465 MET C 1672 REMARK 465 SER C 1673 REMARK 465 VAL C 1674 REMARK 465 ASN C 1675 REMARK 465 VAL C 1728 REMARK 465 HIS D 1671 REMARK 465 MET D 1672 REMARK 465 SER D 1673 REMARK 465 VAL D 1674 REMARK 465 ASN D 1675 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A1697 -168.41 -162.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1679 SG REMARK 620 2 CYS A1682 SG 109.1 REMARK 620 3 HIS A1702 ND1 103.3 98.1 REMARK 620 4 CYS A1705 SG 111.2 117.0 116.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1694 SG REMARK 620 2 CYS A1697 SG 115.1 REMARK 620 3 CYS A1720 SG 111.0 104.7 REMARK 620 4 CYS A1723 SG 102.7 109.8 113.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1679 SG REMARK 620 2 CYS B1682 SG 109.5 REMARK 620 3 HIS B1702 ND1 104.0 99.5 REMARK 620 4 CYS B1705 SG 112.3 115.6 114.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B1802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1694 SG REMARK 620 2 CYS B1697 SG 112.6 REMARK 620 3 CYS B1720 SG 110.3 107.6 REMARK 620 4 CYS B1723 SG 103.6 108.7 114.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C1679 SG REMARK 620 2 CYS C1682 SG 108.9 REMARK 620 3 HIS C1702 ND1 103.2 100.2 REMARK 620 4 CYS C1705 SG 114.6 115.6 112.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C1802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C1694 SG REMARK 620 2 CYS C1697 SG 114.4 REMARK 620 3 CYS C1720 SG 112.6 102.5 REMARK 620 4 CYS C1723 SG 103.6 110.4 113.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D1801 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D1679 SG REMARK 620 2 CYS D1682 SG 108.9 REMARK 620 3 HIS D1702 ND1 101.3 99.9 REMARK 620 4 CYS D1705 SG 115.2 116.2 113.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D1802 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D1694 SG REMARK 620 2 CYS D1697 SG 115.7 REMARK 620 3 CYS D1720 SG 111.7 102.7 REMARK 620 4 CYS D1723 SG 102.5 109.9 114.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 1802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1803 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 1802 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 1803 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 1801 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 1802 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 D 1803 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QF3 RELATED DB: PDB DBREF 4QF2 A 1673 1728 UNP Q9UIF9 BAZ2A_HUMAN 1673 1728 DBREF 4QF2 B 1673 1728 UNP Q9UIF9 BAZ2A_HUMAN 1673 1728 DBREF 4QF2 C 1673 1728 UNP Q9UIF9 BAZ2A_HUMAN 1673 1728 DBREF 4QF2 D 1673 1728 UNP Q9UIF9 BAZ2A_HUMAN 1673 1728 SEQADV 4QF2 HIS A 1671 UNP Q9UIF9 EXPRESSION TAG SEQADV 4QF2 MET A 1672 UNP Q9UIF9 EXPRESSION TAG SEQADV 4QF2 HIS B 1671 UNP Q9UIF9 EXPRESSION TAG SEQADV 4QF2 MET B 1672 UNP Q9UIF9 EXPRESSION TAG SEQADV 4QF2 HIS C 1671 UNP Q9UIF9 EXPRESSION TAG SEQADV 4QF2 MET C 1672 UNP Q9UIF9 EXPRESSION TAG SEQADV 4QF2 HIS D 1671 UNP Q9UIF9 EXPRESSION TAG SEQADV 4QF2 MET D 1672 UNP Q9UIF9 EXPRESSION TAG SEQRES 1 A 58 HIS MET SER VAL ASN LYS VAL THR CYS LEU VAL CYS ARG SEQRES 2 A 58 LYS GLY ASP ASN ASP GLU PHE LEU LEU LEU CYS ASP GLY SEQRES 3 A 58 CYS ASP ARG GLY CYS HIS ILE TYR CYS HIS ARG PRO LYS SEQRES 4 A 58 MET GLU ALA VAL PRO GLU GLY ASP TRP PHE CYS THR VAL SEQRES 5 A 58 CYS LEU ALA GLN GLN VAL SEQRES 1 B 58 HIS MET SER VAL ASN LYS VAL THR CYS LEU VAL CYS ARG SEQRES 2 B 58 LYS GLY ASP ASN ASP GLU PHE LEU LEU LEU CYS ASP GLY SEQRES 3 B 58 CYS ASP ARG GLY CYS HIS ILE TYR CYS HIS ARG PRO LYS SEQRES 4 B 58 MET GLU ALA VAL PRO GLU GLY ASP TRP PHE CYS THR VAL SEQRES 5 B 58 CYS LEU ALA GLN GLN VAL SEQRES 1 C 58 HIS MET SER VAL ASN LYS VAL THR CYS LEU VAL CYS ARG SEQRES 2 C 58 LYS GLY ASP ASN ASP GLU PHE LEU LEU LEU CYS ASP GLY SEQRES 3 C 58 CYS ASP ARG GLY CYS HIS ILE TYR CYS HIS ARG PRO LYS SEQRES 4 C 58 MET GLU ALA VAL PRO GLU GLY ASP TRP PHE CYS THR VAL SEQRES 5 C 58 CYS LEU ALA GLN GLN VAL SEQRES 1 D 58 HIS MET SER VAL ASN LYS VAL THR CYS LEU VAL CYS ARG SEQRES 2 D 58 LYS GLY ASP ASN ASP GLU PHE LEU LEU LEU CYS ASP GLY SEQRES 3 D 58 CYS ASP ARG GLY CYS HIS ILE TYR CYS HIS ARG PRO LYS SEQRES 4 D 58 MET GLU ALA VAL PRO GLU GLY ASP TRP PHE CYS THR VAL SEQRES 5 D 58 CYS LEU ALA GLN GLN VAL HET ZN A1801 1 HET ZN A1802 1 HET PO4 A1803 5 HET ZN B1801 1 HET ZN B1802 1 HET PO4 B1803 5 HET ZN C1801 1 HET ZN C1802 1 HET GOL C1803 6 HET ZN D1801 1 HET ZN D1802 1 HET PO4 D1803 5 HETNAM ZN ZINC ION HETNAM PO4 PHOSPHATE ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ZN 8(ZN 2+) FORMUL 7 PO4 3(O4 P 3-) FORMUL 13 GOL C3 H8 O3 FORMUL 17 HOH *120(H2 O) HELIX 1 1 ASN A 1687 GLU A 1689 5 3 HELIX 2 2 CYS A 1720 ALA A 1725 1 6 HELIX 3 3 ASN B 1687 GLU B 1689 5 3 HELIX 4 4 TYR B 1704 HIS B 1706 5 3 HELIX 5 5 CYS B 1720 GLN B 1726 1 7 HELIX 6 6 ASN C 1687 GLU C 1689 5 3 HELIX 7 7 CYS C 1720 GLN C 1727 1 8 HELIX 8 8 ASN D 1687 GLU D 1689 5 3 HELIX 9 9 CYS D 1720 ALA D 1725 1 6 SHEET 1 A 2 LEU A1691 LEU A1693 0 SHEET 2 A 2 GLY A1700 HIS A1702 -1 O CYS A1701 N LEU A1692 SHEET 1 B 2 LEU B1691 LEU B1693 0 SHEET 2 B 2 GLY B1700 HIS B1702 -1 O CYS B1701 N LEU B1692 SHEET 1 C 2 LEU C1691 LEU C1693 0 SHEET 2 C 2 GLY C1700 HIS C1702 -1 O CYS C1701 N LEU C1692 SHEET 1 D 2 LEU D1691 LEU D1693 0 SHEET 2 D 2 GLY D1700 HIS D1702 -1 O CYS D1701 N LEU D1692 LINK SG CYS A1679 ZN ZN A1801 1555 1555 2.32 LINK SG CYS A1682 ZN ZN A1801 1555 1555 2.28 LINK SG CYS A1694 ZN ZN A1802 1555 1555 2.19 LINK SG CYS A1697 ZN ZN A1802 1555 1555 2.26 LINK ND1 HIS A1702 ZN ZN A1801 1555 1555 2.12 LINK SG CYS A1705 ZN ZN A1801 1555 1555 2.31 LINK SG CYS A1720 ZN ZN A1802 1555 1555 2.35 LINK SG CYS A1723 ZN ZN A1802 1555 1555 2.33 LINK SG CYS B1679 ZN ZN B1801 1555 1555 2.31 LINK SG CYS B1682 ZN ZN B1801 1555 1555 2.28 LINK SG CYS B1694 ZN ZN B1802 1555 1555 2.31 LINK SG CYS B1697 ZN ZN B1802 1555 1555 2.24 LINK ND1 HIS B1702 ZN ZN B1801 1555 1555 2.15 LINK SG CYS B1705 ZN ZN B1801 1555 1555 2.30 LINK SG CYS B1720 ZN ZN B1802 1555 1555 2.39 LINK SG CYS B1723 ZN ZN B1802 1555 1555 2.30 LINK SG CYS C1679 ZN ZN C1801 1555 1555 2.34 LINK SG CYS C1682 ZN ZN C1801 1555 1555 2.27 LINK SG CYS C1694 ZN ZN C1802 1555 1555 2.28 LINK SG CYS C1697 ZN ZN C1802 1555 1555 2.28 LINK ND1 HIS C1702 ZN ZN C1801 1555 1555 2.18 LINK SG CYS C1705 ZN ZN C1801 1555 1555 2.32 LINK SG CYS C1720 ZN ZN C1802 1555 1555 2.36 LINK SG CYS C1723 ZN ZN C1802 1555 1555 2.31 LINK SG CYS D1679 ZN ZN D1801 1555 1555 2.33 LINK SG CYS D1682 ZN ZN D1801 1555 1555 2.38 LINK SG CYS D1694 ZN ZN D1802 1555 1555 2.24 LINK SG CYS D1697 ZN ZN D1802 1555 1555 2.33 LINK ND1 HIS D1702 ZN ZN D1801 1555 1555 2.17 LINK SG CYS D1705 ZN ZN D1801 1555 1555 2.29 LINK SG CYS D1720 ZN ZN D1802 1555 1555 2.39 LINK SG CYS D1723 ZN ZN D1802 1555 1555 2.33 CISPEP 1 ARG A 1707 PRO A 1708 0 8.42 CISPEP 2 ARG B 1707 PRO B 1708 0 13.08 CISPEP 3 ARG C 1707 PRO C 1708 0 5.99 CISPEP 4 ARG D 1707 PRO D 1708 0 5.07 SITE 1 AC1 4 CYS A1679 CYS A1682 HIS A1702 CYS A1705 SITE 1 AC2 4 CYS A1694 CYS A1697 CYS A1720 CYS A1723 SITE 1 AC3 2 ARG A1707 HOH C1914 SITE 1 AC4 4 CYS B1679 CYS B1682 HIS B1702 CYS B1705 SITE 1 AC5 4 CYS B1694 CYS B1697 CYS B1720 CYS B1723 SITE 1 AC6 2 ARG B1707 HOH B1910 SITE 1 AC7 4 CYS C1679 CYS C1682 HIS C1702 CYS C1705 SITE 1 AC8 4 CYS C1694 CYS C1697 CYS C1720 CYS C1723 SITE 1 AC9 3 ASN A1687 ARG C1707 LYS C1709 SITE 1 BC1 4 CYS D1679 CYS D1682 HIS D1702 CYS D1705 SITE 1 BC2 4 CYS D1694 CYS D1697 CYS D1720 CYS D1723 SITE 1 BC3 4 ARG D1707 LYS D1709 HOH D1930 HOH D1932 CRYST1 72.014 72.014 99.061 90.00 90.00 90.00 P 43 21 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013886 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013886 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010095 0.00000