data_4QFJ # _entry.id 4QFJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QFJ pdb_00004qfj 10.2210/pdb4qfj/pdb RCSB RCSB085990 ? ? WWPDB D_1000085990 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4QFI _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4QFJ _pdbx_database_status.recvd_initial_deposition_date 2014-05-21 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Yeo, K.J.' 1 'Hwang, E.' 2 'Min, K.M.' 3 'Hwang, K.Y.' 4 'Jeon, Y.H.' 5 'Chang, S.I.' 6 'Cheong, H.K.' 7 # _citation.id primary _citation.title 'The crystal structure of rat angiogenin-heparin complex' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Yeo, K.J.' 1 ? primary 'Hwang, E.' 2 ? primary 'Min, K.M.' 3 ? primary 'Hwang, K.Y.' 4 ? primary 'Jeon, Y.H.' 5 ? primary 'Chang, S.I.' 6 ? primary 'Cheong, H.K.' 7 ? # _cell.entry_id 4QFJ _cell.length_a 39.415 _cell.length_b 42.420 _cell.length_c 154.312 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QFJ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Angiogenin 14042.957 2 ? ? 'Catalytic domain, UNP residues 24-145' ? 2 branched man ;2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose-(1-4)-2-O-sulfo-alpha-L-idopyranuronic acid-(1-4)-2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose ; 1750.427 1 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 4 non-polymer syn 'ACETIC ACID' 60.052 2 ? ? ? ? 5 water nat water 18.015 68 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMAQDDPRYTKFLTQHYDAKPKGRDARYCESMMRRRGLTSPCKEVNTFIHGNKGSIKAICGANGSPYGENLRISQSPF QITTCKHTGGSPRPPCRYRASAGFRHVVIACENGLPVHFDESFISL ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMAQDDPRYTKFLTQHYDAKPKGRDARYCESMMRRRGLTSPCKEVNTFIHGNKGSIKAICGANGSPYGENLRISQSPF QITTCKHTGGSPRPPCRYRASAGFRHVVIACENGLPVHFDESFISL ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 GLN n 1 7 ASP n 1 8 ASP n 1 9 PRO n 1 10 ARG n 1 11 TYR n 1 12 THR n 1 13 LYS n 1 14 PHE n 1 15 LEU n 1 16 THR n 1 17 GLN n 1 18 HIS n 1 19 TYR n 1 20 ASP n 1 21 ALA n 1 22 LYS n 1 23 PRO n 1 24 LYS n 1 25 GLY n 1 26 ARG n 1 27 ASP n 1 28 ALA n 1 29 ARG n 1 30 TYR n 1 31 CYS n 1 32 GLU n 1 33 SER n 1 34 MET n 1 35 MET n 1 36 ARG n 1 37 ARG n 1 38 ARG n 1 39 GLY n 1 40 LEU n 1 41 THR n 1 42 SER n 1 43 PRO n 1 44 CYS n 1 45 LYS n 1 46 GLU n 1 47 VAL n 1 48 ASN n 1 49 THR n 1 50 PHE n 1 51 ILE n 1 52 HIS n 1 53 GLY n 1 54 ASN n 1 55 LYS n 1 56 GLY n 1 57 SER n 1 58 ILE n 1 59 LYS n 1 60 ALA n 1 61 ILE n 1 62 CYS n 1 63 GLY n 1 64 ALA n 1 65 ASN n 1 66 GLY n 1 67 SER n 1 68 PRO n 1 69 TYR n 1 70 GLY n 1 71 GLU n 1 72 ASN n 1 73 LEU n 1 74 ARG n 1 75 ILE n 1 76 SER n 1 77 GLN n 1 78 SER n 1 79 PRO n 1 80 PHE n 1 81 GLN n 1 82 ILE n 1 83 THR n 1 84 THR n 1 85 CYS n 1 86 LYS n 1 87 HIS n 1 88 THR n 1 89 GLY n 1 90 GLY n 1 91 SER n 1 92 PRO n 1 93 ARG n 1 94 PRO n 1 95 PRO n 1 96 CYS n 1 97 ARG n 1 98 TYR n 1 99 ARG n 1 100 ALA n 1 101 SER n 1 102 ALA n 1 103 GLY n 1 104 PHE n 1 105 ARG n 1 106 HIS n 1 107 VAL n 1 108 VAL n 1 109 ILE n 1 110 ALA n 1 111 CYS n 1 112 GLU n 1 113 ASN n 1 114 GLY n 1 115 LEU n 1 116 PRO n 1 117 VAL n 1 118 HIS n 1 119 PHE n 1 120 ASP n 1 121 GLU n 1 122 SER n 1 123 PHE n 1 124 ILE n 1 125 SER n 1 126 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 126 _entity_src_gen.gene_src_common_name Rat _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Ang, Ang1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Rattus norvegicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10116 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q5WRG2_RAT _struct_ref.pdbx_db_accession Q5WRG2 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;AQDDPRYTKFLTQHYDAKPKGRDARYCESMMRRRGLTSPCKEVNTFIHGNKGSIKAICGANGSPYGENLRISQSPFQITT CKHTGGSPRPPCRYRASAGFRHVVIACENGLPVHFDESFISL ; _struct_ref.pdbx_align_begin 24 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4QFJ A 5 ? 126 ? Q5WRG2 24 ? 145 ? 0 121 2 1 4QFJ B 5 ? 126 ? Q5WRG2 24 ? 145 ? 0 121 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QFJ GLY A 1 ? UNP Q5WRG2 ? ? 'expression tag' -4 1 1 4QFJ SER A 2 ? UNP Q5WRG2 ? ? 'expression tag' -3 2 1 4QFJ HIS A 3 ? UNP Q5WRG2 ? ? 'expression tag' -2 3 1 4QFJ MET A 4 ? UNP Q5WRG2 ? ? 'expression tag' -1 4 2 4QFJ GLY B 1 ? UNP Q5WRG2 ? ? 'expression tag' -4 5 2 4QFJ SER B 2 ? UNP Q5WRG2 ? ? 'expression tag' -3 6 2 4QFJ HIS B 3 ? UNP Q5WRG2 ? ? 'expression tag' -2 7 2 4QFJ MET B 4 ? UNP Q5WRG2 ? ? 'expression tag' -1 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 IDS 'L-saccharide, alpha linking' n '2-O-sulfo-alpha-L-idopyranuronic acid' 'O2-SULFO-GLUCURONIC ACID; 2-O-sulfo-alpha-L-iduronic acid; 2-O-sulfo-L-iduronic acid; 2-O-sulfo-iduronic acid' 'C6 H10 O10 S' 274.203 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SGN 'D-saccharide, alpha linking' n '2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucopyranose' ;N,O6-DISULFO-GLUCOSAMINE; 6-O-sulfo-N-sulfo-alpha-D-glucosamine; 2-deoxy-6-O-sulfo-2-(sulfoamino)-alpha-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-D-glucose; 2-deoxy-6-O-sulfo-2-(sulfoamino)-glucose ; 'C6 H13 N O11 S2' 339.298 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4QFJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_percent_sol 46.44 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.pdbx_details '9% PEG8000, 5mM zinc acetate, 100mM sodium cacodylate (pH 6.5), VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.00000 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'PHOTON FACTORY BEAMLINE BL-17A' _diffrn_source.pdbx_synchrotron_site 'Photon Factory' _diffrn_source.pdbx_synchrotron_beamline BL-17A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.00000 # _reflns.entry_id 4QFJ _reflns.observed_criterion_sigma_I 3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 2.196 _reflns.number_obs 13833 _reflns.number_all ? _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.196 _reflns_shell.d_res_low 2.24 _reflns_shell.percent_possible_all 99.9 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4QFJ _refine.ls_number_reflns_obs 13781 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.189 _refine.ls_d_res_high 2.196 _refine.ls_percent_reflns_obs 99.18 _refine.ls_R_factor_obs 0.2195 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2141 _refine.ls_R_factor_R_free 0.2655 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.14 _refine.ls_number_reflns_R_free 1397 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 6.9639 _refine.aniso_B[2][2] -2.3663 _refine.aniso_B[3][3] -4.5976 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.399 _refine.solvent_model_param_bsol 40.091 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.83 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 2BWK _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.63 _refine.pdbx_overall_phase_error 25.99 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1755 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 115 _refine_hist.number_atoms_solvent 68 _refine_hist.number_atoms_total 1938 _refine_hist.d_res_high 2.196 _refine_hist.d_res_low 38.189 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.010 ? ? 1920 ? 'X-RAY DIFFRACTION' f_angle_d 1.334 ? ? 2599 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.654 ? ? 737 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.078 ? ? 285 ? 'X-RAY DIFFRACTION' f_plane_restr 0.005 ? ? 326 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 10 2.196 2.2744 1193 0.2236 98.00 0.2913 . . 128 . . . . 'X-RAY DIFFRACTION' 10 2.2744 2.3655 1223 0.2247 100.00 0.3387 . . 140 . . . . 'X-RAY DIFFRACTION' 10 2.3655 2.4731 1239 0.2282 100.00 0.2891 . . 134 . . . . 'X-RAY DIFFRACTION' 10 2.4731 2.6034 1209 0.2141 100.00 0.2749 . . 139 . . . . 'X-RAY DIFFRACTION' 10 2.6034 2.7665 1240 0.2348 100.00 0.3214 . . 133 . . . . 'X-RAY DIFFRACTION' 10 2.7665 2.9800 1226 0.2342 100.00 0.3151 . . 147 . . . . 'X-RAY DIFFRACTION' 10 2.9800 3.2798 1253 0.2332 100.00 0.2696 . . 142 . . . . 'X-RAY DIFFRACTION' 10 3.2798 3.7540 1232 0.1958 99.00 0.2097 . . 140 . . . . 'X-RAY DIFFRACTION' 10 3.7540 4.7283 1265 0.1688 99.00 0.2254 . . 147 . . . . 'X-RAY DIFFRACTION' 10 4.7283 38.1947 1304 0.2414 96.00 0.2783 . . 147 . . . . # _struct.entry_id 4QFJ _struct.title 'The crystal structure of rat angiogenin-heparin complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QFJ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'catalytic, angiogenesis, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 3 ? G N N 4 ? H N N 5 ? I N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 8 ? TYR A 19 ? ASP A 3 TYR A 14 1 ? 12 HELX_P HELX_P2 2 ASP A 27 ? ARG A 38 ? ASP A 22 ARG A 33 1 ? 12 HELX_P HELX_P3 3 ASN A 54 ? ALA A 60 ? ASN A 49 ALA A 55 1 ? 7 HELX_P HELX_P4 4 ILE A 61 ? GLY A 63 ? ILE A 56 GLY A 58 5 ? 3 HELX_P HELX_P5 5 PRO B 9 ? TYR B 19 ? PRO B 4 TYR B 14 1 ? 11 HELX_P HELX_P6 6 ASP B 27 ? ARG B 38 ? ASP B 22 ARG B 33 1 ? 12 HELX_P HELX_P7 7 ASN B 54 ? ALA B 60 ? ASN B 49 ALA B 55 1 ? 7 HELX_P HELX_P8 8 ILE B 61 ? GLY B 63 ? ILE B 56 GLY B 58 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 85 SG ? ? A CYS 26 A CYS 80 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf2 disulf ? ? A CYS 44 SG ? ? ? 1_555 A CYS 96 SG ? ? A CYS 39 A CYS 91 1_555 ? ? ? ? ? ? ? 2.031 ? ? disulf3 disulf ? ? A CYS 62 SG ? ? ? 1_555 A CYS 111 SG ? ? A CYS 57 A CYS 106 1_555 ? ? ? ? ? ? ? 2.039 ? ? disulf4 disulf ? ? B CYS 31 SG ? ? ? 1_555 B CYS 85 SG ? ? B CYS 26 B CYS 80 1_555 ? ? ? ? ? ? ? 2.048 ? ? disulf5 disulf ? ? B CYS 44 SG ? ? ? 1_555 B CYS 96 SG ? ? B CYS 39 B CYS 91 1_555 ? ? ? ? ? ? ? 2.029 ? ? disulf6 disulf ? ? B CYS 62 SG ? ? ? 1_555 B CYS 111 SG ? ? B CYS 57 B CYS 106 1_555 ? ? ? ? ? ? ? 2.036 ? ? covale1 covale both ? C SGN . O4 ? ? ? 1_555 C IDS . C1 ? ? C SGN 1 C IDS 2 1_555 ? ? ? ? ? ? ? 1.436 sing ? covale2 covale both ? C IDS . O4 ? ? ? 1_555 C SGN . C1 ? ? C IDS 2 C SGN 3 1_555 ? ? ? ? ? ? ? 1.425 sing ? covale3 covale both ? C SGN . O4 ? ? ? 1_555 C IDS . C1 ? ? C SGN 3 C IDS 4 1_555 ? ? ? ? ? ? ? 1.414 sing ? covale4 covale both ? C IDS . O4 ? ? ? 1_555 C SGN . C1 ? ? C IDS 4 C SGN 5 1_555 ? ? ? ? ? ? ? 1.429 sing ? covale5 covale both ? C SGN . O4 ? ? ? 1_555 C IDS . C1 ? ? C SGN 5 C IDS 6 1_555 ? ? ? ? ? ? ? 1.425 sing ? metalc1 metalc ? ? A GLU 46 OE2 ? ? ? 1_555 D ZN . ZN ? ? A GLU 41 A ZN 201 1_555 ? ? ? ? ? ? ? 2.218 ? ? metalc2 metalc ? ? A GLU 46 OE1 ? ? ? 1_555 D ZN . ZN ? ? A GLU 41 A ZN 201 1_555 ? ? ? ? ? ? ? 2.614 ? ? metalc3 metalc ? ? A HIS 87 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 82 A ZN 201 1_555 ? ? ? ? ? ? ? 2.192 ? ? metalc4 metalc ? ? B GLU 46 OE1 ? ? ? 1_555 F ZN . ZN ? ? B GLU 41 B ZN 201 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc5 metalc ? ? B GLU 46 OE2 ? ? ? 1_555 F ZN . ZN ? ? B GLU 41 B ZN 201 1_555 ? ? ? ? ? ? ? 2.552 ? ? metalc6 metalc ? ? B HIS 87 ND1 ? ? ? 1_555 F ZN . ZN ? ? B HIS 82 B ZN 201 1_555 ? ? ? ? ? ? ? 2.352 ? ? metalc7 metalc ? ? F ZN . ZN ? ? ? 1_555 G ACY . OXT ? ? B ZN 201 B ACY 202 1_555 ? ? ? ? ? ? ? 2.275 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 42 A . ? SER 37 A PRO 43 A ? PRO 38 A 1 1.86 2 PRO 94 A . ? PRO 89 A PRO 95 A ? PRO 90 A 1 3.41 3 SER 42 B . ? SER 37 B PRO 43 B ? PRO 38 B 1 1.69 4 PRO 94 B . ? PRO 89 B PRO 95 B ? PRO 90 B 1 5.61 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 4 ? C ? 3 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 47 ? ILE A 51 ? VAL A 42 ILE A 46 A 2 PHE A 80 ? THR A 88 ? PHE A 75 THR A 83 A 3 ARG A 97 ? ARG A 105 ? ARG A 92 ARG A 100 B 1 GLY A 66 ? PRO A 68 ? GLY A 61 PRO A 63 B 2 ARG A 74 ? SER A 76 ? ARG A 69 SER A 71 B 3 VAL A 108 ? GLU A 112 ? VAL A 103 GLU A 107 B 4 LEU A 115 ? PHE A 119 ? LEU A 110 PHE A 114 C 1 VAL B 47 ? ILE B 51 ? VAL B 42 ILE B 46 C 2 PHE B 80 ? THR B 88 ? PHE B 75 THR B 83 C 3 ARG B 97 ? ARG B 105 ? ARG B 92 ARG B 100 D 1 GLY B 66 ? TYR B 69 ? GLY B 61 TYR B 64 D 2 LEU B 73 ? SER B 76 ? LEU B 68 SER B 71 D 3 VAL B 108 ? GLU B 112 ? VAL B 103 GLU B 107 D 4 LEU B 115 ? PHE B 119 ? LEU B 110 PHE B 114 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 48 ? N ASN A 43 O CYS A 85 ? O CYS A 80 A 2 3 N THR A 84 ? N THR A 79 O SER A 101 ? O SER A 96 B 1 2 N SER A 67 ? N SER A 62 O ILE A 75 ? O ILE A 70 B 2 3 N ARG A 74 ? N ARG A 69 O ILE A 109 ? O ILE A 104 B 3 4 N ALA A 110 ? N ALA A 105 O VAL A 117 ? O VAL A 112 C 1 2 N ASN B 48 ? N ASN B 43 O CYS B 85 ? O CYS B 80 C 2 3 N ILE B 82 ? N ILE B 77 O GLY B 103 ? O GLY B 98 D 1 2 N SER B 67 ? N SER B 62 O ILE B 75 ? O ILE B 70 D 2 3 N ARG B 74 ? N ARG B 69 O ILE B 109 ? O ILE B 104 D 3 4 N GLU B 112 ? N GLU B 107 O LEU B 115 ? O LEU B 110 # _database_PDB_matrix.entry_id 4QFJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4QFJ _atom_sites.fract_transf_matrix[1][1] 0.025371 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023574 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006480 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 ? ? ? A . n A 1 2 SER 2 -3 ? ? ? A . n A 1 3 HIS 3 -2 ? ? ? A . n A 1 4 MET 4 -1 ? ? ? A . n A 1 5 ALA 5 0 ? ? ? A . n A 1 6 GLN 6 1 ? ? ? A . n A 1 7 ASP 7 2 ? ? ? A . n A 1 8 ASP 8 3 3 ASP ASP A . n A 1 9 PRO 9 4 4 PRO PRO A . n A 1 10 ARG 10 5 5 ARG ARG A . n A 1 11 TYR 11 6 6 TYR TYR A . n A 1 12 THR 12 7 7 THR THR A . n A 1 13 LYS 13 8 8 LYS LYS A . n A 1 14 PHE 14 9 9 PHE PHE A . n A 1 15 LEU 15 10 10 LEU LEU A . n A 1 16 THR 16 11 11 THR THR A . n A 1 17 GLN 17 12 12 GLN GLN A . n A 1 18 HIS 18 13 13 HIS HIS A . n A 1 19 TYR 19 14 14 TYR TYR A . n A 1 20 ASP 20 15 15 ASP ASP A . n A 1 21 ALA 21 16 16 ALA ALA A . n A 1 22 LYS 22 17 17 LYS LYS A . n A 1 23 PRO 23 18 18 PRO PRO A . n A 1 24 LYS 24 19 19 LYS LYS A . n A 1 25 GLY 25 20 20 GLY GLY A . n A 1 26 ARG 26 21 21 ARG ARG A . n A 1 27 ASP 27 22 22 ASP ASP A . n A 1 28 ALA 28 23 23 ALA ALA A . n A 1 29 ARG 29 24 24 ARG ARG A . n A 1 30 TYR 30 25 25 TYR TYR A . n A 1 31 CYS 31 26 26 CYS CYS A . n A 1 32 GLU 32 27 27 GLU GLU A . n A 1 33 SER 33 28 28 SER SER A . n A 1 34 MET 34 29 29 MET MET A . n A 1 35 MET 35 30 30 MET MET A . n A 1 36 ARG 36 31 31 ARG ARG A . n A 1 37 ARG 37 32 32 ARG ARG A . n A 1 38 ARG 38 33 33 ARG ARG A . n A 1 39 GLY 39 34 34 GLY GLY A . n A 1 40 LEU 40 35 35 LEU LEU A . n A 1 41 THR 41 36 36 THR THR A . n A 1 42 SER 42 37 37 SER SER A . n A 1 43 PRO 43 38 38 PRO PRO A . n A 1 44 CYS 44 39 39 CYS CYS A . n A 1 45 LYS 45 40 40 LYS LYS A . n A 1 46 GLU 46 41 41 GLU GLU A . n A 1 47 VAL 47 42 42 VAL VAL A . n A 1 48 ASN 48 43 43 ASN ASN A . n A 1 49 THR 49 44 44 THR THR A . n A 1 50 PHE 50 45 45 PHE PHE A . n A 1 51 ILE 51 46 46 ILE ILE A . n A 1 52 HIS 52 47 47 HIS HIS A . n A 1 53 GLY 53 48 48 GLY GLY A . n A 1 54 ASN 54 49 49 ASN ASN A . n A 1 55 LYS 55 50 50 LYS LYS A . n A 1 56 GLY 56 51 51 GLY GLY A . n A 1 57 SER 57 52 52 SER SER A . n A 1 58 ILE 58 53 53 ILE ILE A . n A 1 59 LYS 59 54 54 LYS LYS A . n A 1 60 ALA 60 55 55 ALA ALA A . n A 1 61 ILE 61 56 56 ILE ILE A . n A 1 62 CYS 62 57 57 CYS CYS A . n A 1 63 GLY 63 58 58 GLY GLY A . n A 1 64 ALA 64 59 59 ALA ALA A . n A 1 65 ASN 65 60 60 ASN ASN A . n A 1 66 GLY 66 61 61 GLY GLY A . n A 1 67 SER 67 62 62 SER SER A . n A 1 68 PRO 68 63 63 PRO PRO A . n A 1 69 TYR 69 64 64 TYR TYR A . n A 1 70 GLY 70 65 ? ? ? A . n A 1 71 GLU 71 66 ? ? ? A . n A 1 72 ASN 72 67 67 ASN ASN A . n A 1 73 LEU 73 68 68 LEU LEU A . n A 1 74 ARG 74 69 69 ARG ARG A . n A 1 75 ILE 75 70 70 ILE ILE A . n A 1 76 SER 76 71 71 SER SER A . n A 1 77 GLN 77 72 72 GLN GLN A . n A 1 78 SER 78 73 73 SER SER A . n A 1 79 PRO 79 74 74 PRO PRO A . n A 1 80 PHE 80 75 75 PHE PHE A . n A 1 81 GLN 81 76 76 GLN GLN A . n A 1 82 ILE 82 77 77 ILE ILE A . n A 1 83 THR 83 78 78 THR THR A . n A 1 84 THR 84 79 79 THR THR A . n A 1 85 CYS 85 80 80 CYS CYS A . n A 1 86 LYS 86 81 81 LYS LYS A . n A 1 87 HIS 87 82 82 HIS HIS A . n A 1 88 THR 88 83 83 THR THR A . n A 1 89 GLY 89 84 84 GLY GLY A . n A 1 90 GLY 90 85 85 GLY GLY A . n A 1 91 SER 91 86 86 SER SER A . n A 1 92 PRO 92 87 87 PRO PRO A . n A 1 93 ARG 93 88 88 ARG ARG A . n A 1 94 PRO 94 89 89 PRO PRO A . n A 1 95 PRO 95 90 90 PRO PRO A . n A 1 96 CYS 96 91 91 CYS CYS A . n A 1 97 ARG 97 92 92 ARG ARG A . n A 1 98 TYR 98 93 93 TYR TYR A . n A 1 99 ARG 99 94 94 ARG ARG A . n A 1 100 ALA 100 95 95 ALA ALA A . n A 1 101 SER 101 96 96 SER SER A . n A 1 102 ALA 102 97 97 ALA ALA A . n A 1 103 GLY 103 98 98 GLY GLY A . n A 1 104 PHE 104 99 99 PHE PHE A . n A 1 105 ARG 105 100 100 ARG ARG A . n A 1 106 HIS 106 101 101 HIS HIS A . n A 1 107 VAL 107 102 102 VAL VAL A . n A 1 108 VAL 108 103 103 VAL VAL A . n A 1 109 ILE 109 104 104 ILE ILE A . n A 1 110 ALA 110 105 105 ALA ALA A . n A 1 111 CYS 111 106 106 CYS CYS A . n A 1 112 GLU 112 107 107 GLU GLU A . n A 1 113 ASN 113 108 108 ASN ASN A . n A 1 114 GLY 114 109 109 GLY GLY A . n A 1 115 LEU 115 110 110 LEU LEU A . n A 1 116 PRO 116 111 111 PRO PRO A . n A 1 117 VAL 117 112 112 VAL VAL A . n A 1 118 HIS 118 113 113 HIS HIS A . n A 1 119 PHE 119 114 114 PHE PHE A . n A 1 120 ASP 120 115 115 ASP ASP A . n A 1 121 GLU 121 116 116 GLU GLU A . n A 1 122 SER 122 117 117 SER SER A . n A 1 123 PHE 123 118 118 PHE PHE A . n A 1 124 ILE 124 119 ? ? ? A . n A 1 125 SER 125 120 ? ? ? A . n A 1 126 LEU 126 121 ? ? ? A . n B 1 1 GLY 1 -4 ? ? ? B . n B 1 2 SER 2 -3 ? ? ? B . n B 1 3 HIS 3 -2 ? ? ? B . n B 1 4 MET 4 -1 ? ? ? B . n B 1 5 ALA 5 0 ? ? ? B . n B 1 6 GLN 6 1 ? ? ? B . n B 1 7 ASP 7 2 ? ? ? B . n B 1 8 ASP 8 3 3 ASP ASP B . n B 1 9 PRO 9 4 4 PRO PRO B . n B 1 10 ARG 10 5 5 ARG ARG B . n B 1 11 TYR 11 6 6 TYR TYR B . n B 1 12 THR 12 7 7 THR THR B . n B 1 13 LYS 13 8 8 LYS LYS B . n B 1 14 PHE 14 9 9 PHE PHE B . n B 1 15 LEU 15 10 10 LEU LEU B . n B 1 16 THR 16 11 11 THR THR B . n B 1 17 GLN 17 12 12 GLN GLN B . n B 1 18 HIS 18 13 13 HIS HIS B . n B 1 19 TYR 19 14 14 TYR TYR B . n B 1 20 ASP 20 15 15 ASP ASP B . n B 1 21 ALA 21 16 16 ALA ALA B . n B 1 22 LYS 22 17 17 LYS LYS B . n B 1 23 PRO 23 18 ? ? ? B . n B 1 24 LYS 24 19 ? ? ? B . n B 1 25 GLY 25 20 ? ? ? B . n B 1 26 ARG 26 21 21 ARG ARG B . n B 1 27 ASP 27 22 22 ASP ASP B . n B 1 28 ALA 28 23 23 ALA ALA B . n B 1 29 ARG 29 24 24 ARG ARG B . n B 1 30 TYR 30 25 25 TYR TYR B . n B 1 31 CYS 31 26 26 CYS CYS B . n B 1 32 GLU 32 27 27 GLU GLU B . n B 1 33 SER 33 28 28 SER SER B . n B 1 34 MET 34 29 29 MET MET B . n B 1 35 MET 35 30 30 MET MET B . n B 1 36 ARG 36 31 31 ARG ARG B . n B 1 37 ARG 37 32 32 ARG ARG B . n B 1 38 ARG 38 33 33 ARG ARG B . n B 1 39 GLY 39 34 34 GLY GLY B . n B 1 40 LEU 40 35 35 LEU LEU B . n B 1 41 THR 41 36 36 THR THR B . n B 1 42 SER 42 37 37 SER SER B . n B 1 43 PRO 43 38 38 PRO PRO B . n B 1 44 CYS 44 39 39 CYS CYS B . n B 1 45 LYS 45 40 40 LYS LYS B . n B 1 46 GLU 46 41 41 GLU GLU B . n B 1 47 VAL 47 42 42 VAL VAL B . n B 1 48 ASN 48 43 43 ASN ASN B . n B 1 49 THR 49 44 44 THR THR B . n B 1 50 PHE 50 45 45 PHE PHE B . n B 1 51 ILE 51 46 46 ILE ILE B . n B 1 52 HIS 52 47 47 HIS HIS B . n B 1 53 GLY 53 48 48 GLY GLY B . n B 1 54 ASN 54 49 49 ASN ASN B . n B 1 55 LYS 55 50 50 LYS LYS B . n B 1 56 GLY 56 51 51 GLY GLY B . n B 1 57 SER 57 52 52 SER SER B . n B 1 58 ILE 58 53 53 ILE ILE B . n B 1 59 LYS 59 54 54 LYS LYS B . n B 1 60 ALA 60 55 55 ALA ALA B . n B 1 61 ILE 61 56 56 ILE ILE B . n B 1 62 CYS 62 57 57 CYS CYS B . n B 1 63 GLY 63 58 58 GLY GLY B . n B 1 64 ALA 64 59 59 ALA ALA B . n B 1 65 ASN 65 60 60 ASN ASN B . n B 1 66 GLY 66 61 61 GLY GLY B . n B 1 67 SER 67 62 62 SER SER B . n B 1 68 PRO 68 63 63 PRO PRO B . n B 1 69 TYR 69 64 64 TYR TYR B . n B 1 70 GLY 70 65 65 GLY GLY B . n B 1 71 GLU 71 66 66 GLU GLU B . n B 1 72 ASN 72 67 67 ASN ASN B . n B 1 73 LEU 73 68 68 LEU LEU B . n B 1 74 ARG 74 69 69 ARG ARG B . n B 1 75 ILE 75 70 70 ILE ILE B . n B 1 76 SER 76 71 71 SER SER B . n B 1 77 GLN 77 72 72 GLN GLN B . n B 1 78 SER 78 73 73 SER SER B . n B 1 79 PRO 79 74 74 PRO PRO B . n B 1 80 PHE 80 75 75 PHE PHE B . n B 1 81 GLN 81 76 76 GLN GLN B . n B 1 82 ILE 82 77 77 ILE ILE B . n B 1 83 THR 83 78 78 THR THR B . n B 1 84 THR 84 79 79 THR THR B . n B 1 85 CYS 85 80 80 CYS CYS B . n B 1 86 LYS 86 81 81 LYS LYS B . n B 1 87 HIS 87 82 82 HIS HIS B . n B 1 88 THR 88 83 83 THR THR B . n B 1 89 GLY 89 84 84 GLY GLY B . n B 1 90 GLY 90 85 85 GLY GLY B . n B 1 91 SER 91 86 86 SER SER B . n B 1 92 PRO 92 87 87 PRO PRO B . n B 1 93 ARG 93 88 88 ARG ARG B . n B 1 94 PRO 94 89 89 PRO PRO B . n B 1 95 PRO 95 90 90 PRO PRO B . n B 1 96 CYS 96 91 91 CYS CYS B . n B 1 97 ARG 97 92 92 ARG ARG B . n B 1 98 TYR 98 93 93 TYR TYR B . n B 1 99 ARG 99 94 94 ARG ARG B . n B 1 100 ALA 100 95 95 ALA ALA B . n B 1 101 SER 101 96 96 SER SER B . n B 1 102 ALA 102 97 97 ALA ALA B . n B 1 103 GLY 103 98 98 GLY GLY B . n B 1 104 PHE 104 99 99 PHE PHE B . n B 1 105 ARG 105 100 100 ARG ARG B . n B 1 106 HIS 106 101 101 HIS HIS B . n B 1 107 VAL 107 102 102 VAL VAL B . n B 1 108 VAL 108 103 103 VAL VAL B . n B 1 109 ILE 109 104 104 ILE ILE B . n B 1 110 ALA 110 105 105 ALA ALA B . n B 1 111 CYS 111 106 106 CYS CYS B . n B 1 112 GLU 112 107 107 GLU GLU B . n B 1 113 ASN 113 108 108 ASN ASN B . n B 1 114 GLY 114 109 109 GLY GLY B . n B 1 115 LEU 115 110 110 LEU LEU B . n B 1 116 PRO 116 111 111 PRO PRO B . n B 1 117 VAL 117 112 112 VAL VAL B . n B 1 118 HIS 118 113 113 HIS HIS B . n B 1 119 PHE 119 114 114 PHE PHE B . n B 1 120 ASP 120 115 115 ASP ASP B . n B 1 121 GLU 121 116 116 GLU GLU B . n B 1 122 SER 122 117 117 SER SER B . n B 1 123 PHE 123 118 118 PHE PHE B . n B 1 124 ILE 124 119 ? ? ? B . n B 1 125 SER 125 120 ? ? ? B . n B 1 126 LEU 126 121 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 3 ZN 1 201 1 ZN ZN A . E 4 ACY 1 202 1 ACY ACY A . F 3 ZN 1 201 2 ZN ZN B . G 4 ACY 1 202 2 ACY ACY B . H 5 HOH 1 301 32 HOH HOH A . H 5 HOH 2 302 3 HOH HOH A . H 5 HOH 3 303 78 HOH HOH A . H 5 HOH 4 304 65 HOH HOH A . H 5 HOH 5 305 67 HOH HOH A . H 5 HOH 6 306 55 HOH HOH A . H 5 HOH 7 307 68 HOH HOH A . H 5 HOH 8 308 73 HOH HOH A . H 5 HOH 9 309 54 HOH HOH A . H 5 HOH 10 310 24 HOH HOH A . H 5 HOH 11 311 17 HOH HOH A . H 5 HOH 12 312 14 HOH HOH A . H 5 HOH 13 313 4 HOH HOH A . H 5 HOH 14 314 16 HOH HOH A . H 5 HOH 15 315 126 HOH HOH A . H 5 HOH 16 316 31 HOH HOH A . H 5 HOH 17 317 106 HOH HOH A . H 5 HOH 18 318 15 HOH HOH A . H 5 HOH 19 319 1 HOH HOH A . H 5 HOH 20 320 25 HOH HOH A . H 5 HOH 21 321 13 HOH HOH A . H 5 HOH 22 322 10 HOH HOH A . H 5 HOH 23 323 28 HOH HOH A . H 5 HOH 24 324 36 HOH HOH A . H 5 HOH 25 325 115 HOH HOH A . H 5 HOH 26 326 9 HOH HOH A . H 5 HOH 27 327 19 HOH HOH A . H 5 HOH 28 328 76 HOH HOH A . H 5 HOH 29 329 38 HOH HOH A . H 5 HOH 30 330 39 HOH HOH A . H 5 HOH 31 331 69 HOH HOH A . H 5 HOH 32 332 101 HOH HOH A . H 5 HOH 33 333 81 HOH HOH A . H 5 HOH 34 334 82 HOH HOH A . H 5 HOH 35 335 30 HOH HOH A . H 5 HOH 36 336 72 HOH HOH A . H 5 HOH 37 337 79 HOH HOH A . H 5 HOH 38 338 80 HOH HOH A . I 5 HOH 1 301 34 HOH HOH B . I 5 HOH 2 302 57 HOH HOH B . I 5 HOH 3 303 60 HOH HOH B . I 5 HOH 4 304 123 HOH HOH B . I 5 HOH 5 305 33 HOH HOH B . I 5 HOH 6 306 122 HOH HOH B . I 5 HOH 7 307 23 HOH HOH B . I 5 HOH 8 308 61 HOH HOH B . I 5 HOH 9 309 18 HOH HOH B . I 5 HOH 10 310 40 HOH HOH B . I 5 HOH 11 311 89 HOH HOH B . I 5 HOH 12 312 92 HOH HOH B . I 5 HOH 13 313 108 HOH HOH B . I 5 HOH 14 314 86 HOH HOH B . I 5 HOH 15 315 8 HOH HOH B . I 5 HOH 16 316 70 HOH HOH B . I 5 HOH 17 317 127 HOH HOH B . I 5 HOH 18 318 91 HOH HOH B . I 5 HOH 19 319 74 HOH HOH B . I 5 HOH 20 320 5 HOH HOH B . I 5 HOH 21 321 110 HOH HOH B . I 5 HOH 22 322 107 HOH HOH B . I 5 HOH 23 323 112 HOH HOH B . I 5 HOH 24 324 90 HOH HOH B . I 5 HOH 25 325 87 HOH HOH B . I 5 HOH 26 326 114 HOH HOH B . I 5 HOH 27 327 71 HOH HOH B . I 5 HOH 28 328 83 HOH HOH B . I 5 HOH 29 329 93 HOH HOH B . I 5 HOH 30 330 85 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2160 ? 1 MORE -75 ? 1 'SSA (A^2)' 12420 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE2 ? A GLU 46 ? A GLU 41 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 OE1 ? A GLU 46 ? A GLU 41 ? 1_555 53.2 ? 2 OE2 ? A GLU 46 ? A GLU 41 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 87 ? A HIS 82 ? 1_555 126.4 ? 3 OE1 ? A GLU 46 ? A GLU 41 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 ND1 ? A HIS 87 ? A HIS 82 ? 1_555 103.5 ? 4 OE1 ? B GLU 46 ? B GLU 41 ? 1_555 ZN ? F ZN . ? B ZN 201 ? 1_555 OE2 ? B GLU 46 ? B GLU 41 ? 1_555 54.0 ? 5 OE1 ? B GLU 46 ? B GLU 41 ? 1_555 ZN ? F ZN . ? B ZN 201 ? 1_555 ND1 ? B HIS 87 ? B HIS 82 ? 1_555 113.2 ? 6 OE2 ? B GLU 46 ? B GLU 41 ? 1_555 ZN ? F ZN . ? B ZN 201 ? 1_555 ND1 ? B HIS 87 ? B HIS 82 ? 1_555 90.9 ? 7 OE1 ? B GLU 46 ? B GLU 41 ? 1_555 ZN ? F ZN . ? B ZN 201 ? 1_555 OXT ? G ACY . ? B ACY 202 ? 1_555 100.2 ? 8 OE2 ? B GLU 46 ? B GLU 41 ? 1_555 ZN ? F ZN . ? B ZN 201 ? 1_555 OXT ? G ACY . ? B ACY 202 ? 1_555 153.5 ? 9 ND1 ? B HIS 87 ? B HIS 82 ? 1_555 ZN ? F ZN . ? B ZN 201 ? 1_555 OXT ? G ACY . ? B ACY 202 ? 1_555 95.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-08-27 2 'Structure model' 2 0 2020-07-29 3 'Structure model' 3 0 2020-10-14 4 'Structure model' 3 1 2023-11-08 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 2 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Atomic model' 3 2 'Structure model' 'Data collection' 4 2 'Structure model' 'Database references' 5 2 'Structure model' 'Derived calculations' 6 2 'Structure model' 'Non-polymer description' 7 2 'Structure model' 'Structure summary' 8 3 'Structure model' Advisory 9 3 'Structure model' 'Atomic model' 10 3 'Structure model' 'Data collection' 11 3 'Structure model' 'Derived calculations' 12 3 'Structure model' 'Non-polymer description' 13 3 'Structure model' 'Source and taxonomy' 14 3 'Structure model' 'Structure summary' 15 4 'Structure model' 'Data collection' 16 4 'Structure model' 'Database references' 17 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' atom_site 2 2 'Structure model' chem_comp 3 2 'Structure model' entity 4 2 'Structure model' pdbx_branch_scheme 5 2 'Structure model' pdbx_chem_comp_identifier 6 2 'Structure model' pdbx_entity_branch 7 2 'Structure model' pdbx_entity_branch_descriptor 8 2 'Structure model' pdbx_entity_branch_link 9 2 'Structure model' pdbx_entity_branch_list 10 2 'Structure model' pdbx_entity_nonpoly 11 2 'Structure model' pdbx_nonpoly_scheme 12 2 'Structure model' pdbx_struct_assembly_gen 13 2 'Structure model' pdbx_struct_conn_angle 14 2 'Structure model' pdbx_validate_close_contact 15 2 'Structure model' struct_asym 16 2 'Structure model' struct_conn 17 2 'Structure model' struct_conn_type 18 2 'Structure model' struct_ref_seq_dif 19 2 'Structure model' struct_site 20 2 'Structure model' struct_site_gen 21 3 'Structure model' atom_site 22 3 'Structure model' chem_comp 23 3 'Structure model' entity 24 3 'Structure model' entity_src_gen 25 3 'Structure model' pdbx_branch_scheme 26 3 'Structure model' pdbx_chem_comp_identifier 27 3 'Structure model' pdbx_entity_branch_descriptor 28 3 'Structure model' pdbx_entity_branch_link 29 3 'Structure model' pdbx_entity_branch_list 30 3 'Structure model' pdbx_nonpoly_scheme 31 3 'Structure model' pdbx_struct_conn_angle 32 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 33 3 'Structure model' pdbx_validate_close_contact 34 3 'Structure model' struct_conn 35 4 'Structure model' chem_comp_atom 36 4 'Structure model' chem_comp_bond 37 4 'Structure model' database_2 38 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_atom_site.B_iso_or_equiv' 2 2 'Structure model' '_atom_site.Cartn_x' 3 2 'Structure model' '_atom_site.Cartn_y' 4 2 'Structure model' '_atom_site.Cartn_z' 5 2 'Structure model' '_atom_site.auth_asym_id' 6 2 'Structure model' '_atom_site.auth_atom_id' 7 2 'Structure model' '_atom_site.auth_comp_id' 8 2 'Structure model' '_atom_site.auth_seq_id' 9 2 'Structure model' '_atom_site.label_asym_id' 10 2 'Structure model' '_atom_site.label_atom_id' 11 2 'Structure model' '_atom_site.label_comp_id' 12 2 'Structure model' '_atom_site.label_entity_id' 13 2 'Structure model' '_atom_site.type_symbol' 14 2 'Structure model' '_chem_comp.formula' 15 2 'Structure model' '_chem_comp.formula_weight' 16 2 'Structure model' '_chem_comp.id' 17 2 'Structure model' '_chem_comp.mon_nstd_flag' 18 2 'Structure model' '_chem_comp.name' 19 2 'Structure model' '_chem_comp.type' 20 2 'Structure model' '_entity.formula_weight' 21 2 'Structure model' '_entity.pdbx_description' 22 2 'Structure model' '_entity.pdbx_number_of_molecules' 23 2 'Structure model' '_entity.src_method' 24 2 'Structure model' '_entity.type' 25 2 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 26 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 27 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 28 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 29 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 30 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 31 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 32 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 33 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 34 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 35 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 36 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 37 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 38 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 39 2 'Structure model' '_pdbx_struct_conn_angle.value' 40 2 'Structure model' '_struct_ref_seq_dif.details' 41 3 'Structure model' '_atom_site.B_iso_or_equiv' 42 3 'Structure model' '_atom_site.Cartn_x' 43 3 'Structure model' '_atom_site.Cartn_y' 44 3 'Structure model' '_atom_site.Cartn_z' 45 3 'Structure model' '_atom_site.auth_atom_id' 46 3 'Structure model' '_atom_site.auth_comp_id' 47 3 'Structure model' '_atom_site.auth_seq_id' 48 3 'Structure model' '_atom_site.label_atom_id' 49 3 'Structure model' '_atom_site.label_comp_id' 50 3 'Structure model' '_atom_site.type_symbol' 51 3 'Structure model' '_chem_comp.formula' 52 3 'Structure model' '_chem_comp.formula_weight' 53 3 'Structure model' '_chem_comp.id' 54 3 'Structure model' '_chem_comp.mon_nstd_flag' 55 3 'Structure model' '_chem_comp.name' 56 3 'Structure model' '_chem_comp.pdbx_synonyms' 57 3 'Structure model' '_chem_comp.type' 58 3 'Structure model' '_entity.formula_weight' 59 3 'Structure model' '_entity.pdbx_description' 60 3 'Structure model' '_entity_src_gen.gene_src_common_name' 61 3 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 62 3 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 63 3 'Structure model' '_entity_src_gen.pdbx_seq_type' 64 3 'Structure model' '_pdbx_branch_scheme.mon_id' 65 3 'Structure model' '_pdbx_branch_scheme.pdb_mon_id' 66 3 'Structure model' '_pdbx_chem_comp_identifier.comp_id' 67 3 'Structure model' '_pdbx_chem_comp_identifier.identifier' 68 3 'Structure model' '_pdbx_chem_comp_identifier.program' 69 3 'Structure model' '_pdbx_chem_comp_identifier.type' 70 3 'Structure model' '_pdbx_entity_branch_descriptor.descriptor' 71 3 'Structure model' '_pdbx_entity_branch_link.atom_id_1' 72 3 'Structure model' '_pdbx_entity_branch_link.atom_id_2' 73 3 'Structure model' '_pdbx_entity_branch_link.comp_id_1' 74 3 'Structure model' '_pdbx_entity_branch_link.comp_id_2' 75 3 'Structure model' '_pdbx_entity_branch_link.entity_branch_list_num_1' 76 3 'Structure model' '_pdbx_entity_branch_link.entity_branch_list_num_2' 77 3 'Structure model' '_pdbx_entity_branch_link.leaving_atom_id_1' 78 3 'Structure model' '_pdbx_entity_branch_link.leaving_atom_id_2' 79 3 'Structure model' '_pdbx_entity_branch_list.comp_id' 80 3 'Structure model' '_pdbx_nonpoly_scheme.auth_seq_num' 81 3 'Structure model' '_pdbx_nonpoly_scheme.pdb_seq_num' 82 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 83 3 'Structure model' '_struct_conn.pdbx_dist_value' 84 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 85 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 86 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 87 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 88 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 89 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 90 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 91 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 92 4 'Structure model' '_database_2.pdbx_DOI' 93 4 'Structure model' '_database_2.pdbx_database_accession' # _software.name PHENIX _software.classification refinement _software.version '(phenix.refine: 1.7.1_743)' _software.citation_id ? _software.pdbx_ordinal 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ZN A ZN 201 ? ? OXT A ACY 202 ? ? 1.63 2 1 NH2 A ARG 5 ? ? OE1 A GLU 107 ? ? 2.02 3 1 NZ A LYS 19 ? ? O A HOH 301 ? ? 2.18 4 1 O4 C IDS 2 ? ? O5 C SGN 3 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 21 ? ? -141.72 23.25 2 1 PRO A 87 ? ? -84.18 44.71 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 SER _pdbx_validate_peptide_omega.auth_asym_id_1 B _pdbx_validate_peptide_omega.auth_seq_id_1 117 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 PHE _pdbx_validate_peptide_omega.auth_asym_id_2 B _pdbx_validate_peptide_omega.auth_seq_id_2 118 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega 148.16 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 17 ? CD ? A LYS 22 CD 2 1 Y 1 A LYS 17 ? CE ? A LYS 22 CE 3 1 Y 1 A LYS 17 ? NZ ? A LYS 22 NZ 4 1 Y 1 A ASN 67 ? CG ? A ASN 72 CG 5 1 Y 1 A ASN 67 ? OD1 ? A ASN 72 OD1 6 1 Y 1 A ASN 67 ? ND2 ? A ASN 72 ND2 7 1 Y 1 A ARG 88 ? CG ? A ARG 93 CG 8 1 Y 1 A ARG 88 ? CD ? A ARG 93 CD 9 1 Y 1 A ARG 88 ? NE ? A ARG 93 NE 10 1 Y 1 A ARG 88 ? CZ ? A ARG 93 CZ 11 1 Y 1 A ARG 88 ? NH1 ? A ARG 93 NH1 12 1 Y 1 A ARG 88 ? NH2 ? A ARG 93 NH2 13 1 Y 1 B LYS 17 ? CG ? B LYS 22 CG 14 1 Y 1 B LYS 17 ? CD ? B LYS 22 CD 15 1 Y 1 B LYS 17 ? CE ? B LYS 22 CE 16 1 Y 1 B LYS 17 ? NZ ? B LYS 22 NZ 17 1 Y 1 B ARG 32 ? CD ? B ARG 37 CD 18 1 Y 1 B ARG 32 ? NE ? B ARG 37 NE 19 1 Y 1 B ARG 32 ? CZ ? B ARG 37 CZ 20 1 Y 1 B ARG 32 ? NH1 ? B ARG 37 NH1 21 1 Y 1 B ARG 32 ? NH2 ? B ARG 37 NH2 22 1 Y 1 B GLN 72 ? CD ? B GLN 77 CD 23 1 Y 1 B GLN 72 ? OE1 ? B GLN 77 OE1 24 1 Y 1 B GLN 72 ? NE2 ? B GLN 77 NE2 25 1 Y 1 B GLU 107 ? CD ? B GLU 112 CD 26 1 Y 1 B GLU 107 ? OE1 ? B GLU 112 OE1 27 1 Y 1 B GLU 107 ? OE2 ? B GLU 112 OE2 28 1 Y 1 B ASN 108 ? CG ? B ASN 113 CG 29 1 Y 1 B ASN 108 ? OD1 ? B ASN 113 OD1 30 1 Y 1 B ASN 108 ? ND2 ? B ASN 113 ND2 31 1 N 1 C IDS 6 ? O4 ? C IDS 6 O4 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -4 ? A GLY 1 2 1 Y 1 A SER -3 ? A SER 2 3 1 Y 1 A HIS -2 ? A HIS 3 4 1 Y 1 A MET -1 ? A MET 4 5 1 Y 1 A ALA 0 ? A ALA 5 6 1 Y 1 A GLN 1 ? A GLN 6 7 1 Y 1 A ASP 2 ? A ASP 7 8 1 Y 1 A GLY 65 ? A GLY 70 9 1 Y 1 A GLU 66 ? A GLU 71 10 1 Y 1 A ILE 119 ? A ILE 124 11 1 Y 1 A SER 120 ? A SER 125 12 1 Y 1 A LEU 121 ? A LEU 126 13 1 Y 1 B GLY -4 ? B GLY 1 14 1 Y 1 B SER -3 ? B SER 2 15 1 Y 1 B HIS -2 ? B HIS 3 16 1 Y 1 B MET -1 ? B MET 4 17 1 Y 1 B ALA 0 ? B ALA 5 18 1 Y 1 B GLN 1 ? B GLN 6 19 1 Y 1 B ASP 2 ? B ASP 7 20 1 Y 1 B PRO 18 ? B PRO 23 21 1 Y 1 B LYS 19 ? B LYS 24 22 1 Y 1 B GLY 20 ? B GLY 25 23 1 Y 1 B ILE 119 ? B ILE 124 24 1 Y 1 B SER 120 ? B SER 125 25 1 Y 1 B LEU 121 ? B LEU 126 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACY C C N N 1 ACY O O N N 2 ACY OXT O N N 3 ACY CH3 C N N 4 ACY HXT H N N 5 ACY H1 H N N 6 ACY H2 H N N 7 ACY H3 H N N 8 ALA N N N N 9 ALA CA C N S 10 ALA C C N N 11 ALA O O N N 12 ALA CB C N N 13 ALA OXT O N N 14 ALA H H N N 15 ALA H2 H N N 16 ALA HA H N N 17 ALA HB1 H N N 18 ALA HB2 H N N 19 ALA HB3 H N N 20 ALA HXT H N N 21 ARG N N N N 22 ARG CA C N S 23 ARG C C N N 24 ARG O O N N 25 ARG CB C N N 26 ARG CG C N N 27 ARG CD C N N 28 ARG NE N N N 29 ARG CZ C N N 30 ARG NH1 N N N 31 ARG NH2 N N N 32 ARG OXT O N N 33 ARG H H N N 34 ARG H2 H N N 35 ARG HA H N N 36 ARG HB2 H N N 37 ARG HB3 H N N 38 ARG HG2 H N N 39 ARG HG3 H N N 40 ARG HD2 H N N 41 ARG HD3 H N N 42 ARG HE H N N 43 ARG HH11 H N N 44 ARG HH12 H N N 45 ARG HH21 H N N 46 ARG HH22 H N N 47 ARG HXT H N N 48 ASN N N N N 49 ASN CA C N S 50 ASN C C N N 51 ASN O O N N 52 ASN CB C N N 53 ASN CG C N N 54 ASN OD1 O N N 55 ASN ND2 N N N 56 ASN OXT O N N 57 ASN H H N N 58 ASN H2 H N N 59 ASN HA H N N 60 ASN HB2 H N N 61 ASN HB3 H N N 62 ASN HD21 H N N 63 ASN HD22 H N N 64 ASN HXT H N N 65 ASP N N N N 66 ASP CA C N S 67 ASP C C N N 68 ASP O O N N 69 ASP CB C N N 70 ASP CG C N N 71 ASP OD1 O N N 72 ASP OD2 O N N 73 ASP OXT O N N 74 ASP H H N N 75 ASP H2 H N N 76 ASP HA H N N 77 ASP HB2 H N N 78 ASP HB3 H N N 79 ASP HD2 H N N 80 ASP HXT H N N 81 CYS N N N N 82 CYS CA C N R 83 CYS C C N N 84 CYS O O N N 85 CYS CB C N N 86 CYS SG S N N 87 CYS OXT O N N 88 CYS H H N N 89 CYS H2 H N N 90 CYS HA H N N 91 CYS HB2 H N N 92 CYS HB3 H N N 93 CYS HG H N N 94 CYS HXT H N N 95 GLN N N N N 96 GLN CA C N S 97 GLN C C N N 98 GLN O O N N 99 GLN CB C N N 100 GLN CG C N N 101 GLN CD C N N 102 GLN OE1 O N N 103 GLN NE2 N N N 104 GLN OXT O N N 105 GLN H H N N 106 GLN H2 H N N 107 GLN HA H N N 108 GLN HB2 H N N 109 GLN HB3 H N N 110 GLN HG2 H N N 111 GLN HG3 H N N 112 GLN HE21 H N N 113 GLN HE22 H N N 114 GLN HXT H N N 115 GLU N N N N 116 GLU CA C N S 117 GLU C C N N 118 GLU O O N N 119 GLU CB C N N 120 GLU CG C N N 121 GLU CD C N N 122 GLU OE1 O N N 123 GLU OE2 O N N 124 GLU OXT O N N 125 GLU H H N N 126 GLU H2 H N N 127 GLU HA H N N 128 GLU HB2 H N N 129 GLU HB3 H N N 130 GLU HG2 H N N 131 GLU HG3 H N N 132 GLU HE2 H N N 133 GLU HXT H N N 134 GLY N N N N 135 GLY CA C N N 136 GLY C C N N 137 GLY O O N N 138 GLY OXT O N N 139 GLY H H N N 140 GLY H2 H N N 141 GLY HA2 H N N 142 GLY HA3 H N N 143 GLY HXT H N N 144 HIS N N N N 145 HIS CA C N S 146 HIS C C N N 147 HIS O O N N 148 HIS CB C N N 149 HIS CG C Y N 150 HIS ND1 N Y N 151 HIS CD2 C Y N 152 HIS CE1 C Y N 153 HIS NE2 N Y N 154 HIS OXT O N N 155 HIS H H N N 156 HIS H2 H N N 157 HIS HA H N N 158 HIS HB2 H N N 159 HIS HB3 H N N 160 HIS HD1 H N N 161 HIS HD2 H N N 162 HIS HE1 H N N 163 HIS HE2 H N N 164 HIS HXT H N N 165 HOH O O N N 166 HOH H1 H N N 167 HOH H2 H N N 168 IDS C1 C N R 169 IDS C2 C N R 170 IDS C3 C N S 171 IDS C4 C N S 172 IDS C5 C N R 173 IDS C6 C N N 174 IDS O1 O N N 175 IDS O2 O N N 176 IDS O3 O N N 177 IDS O4 O N N 178 IDS O5 O N N 179 IDS O6A O N N 180 IDS O6B O N N 181 IDS S S N N 182 IDS O1S O N N 183 IDS O2S O N N 184 IDS O3S O N N 185 IDS H1 H N N 186 IDS H2 H N N 187 IDS H3 H N N 188 IDS H4 H N N 189 IDS H5 H N N 190 IDS HO1 H N N 191 IDS HO3 H N N 192 IDS HO4 H N N 193 IDS HO6B H N N 194 IDS HOS3 H N N 195 ILE N N N N 196 ILE CA C N S 197 ILE C C N N 198 ILE O O N N 199 ILE CB C N S 200 ILE CG1 C N N 201 ILE CG2 C N N 202 ILE CD1 C N N 203 ILE OXT O N N 204 ILE H H N N 205 ILE H2 H N N 206 ILE HA H N N 207 ILE HB H N N 208 ILE HG12 H N N 209 ILE HG13 H N N 210 ILE HG21 H N N 211 ILE HG22 H N N 212 ILE HG23 H N N 213 ILE HD11 H N N 214 ILE HD12 H N N 215 ILE HD13 H N N 216 ILE HXT H N N 217 LEU N N N N 218 LEU CA C N S 219 LEU C C N N 220 LEU O O N N 221 LEU CB C N N 222 LEU CG C N N 223 LEU CD1 C N N 224 LEU CD2 C N N 225 LEU OXT O N N 226 LEU H H N N 227 LEU H2 H N N 228 LEU HA H N N 229 LEU HB2 H N N 230 LEU HB3 H N N 231 LEU HG H N N 232 LEU HD11 H N N 233 LEU HD12 H N N 234 LEU HD13 H N N 235 LEU HD21 H N N 236 LEU HD22 H N N 237 LEU HD23 H N N 238 LEU HXT H N N 239 LYS N N N N 240 LYS CA C N S 241 LYS C C N N 242 LYS O O N N 243 LYS CB C N N 244 LYS CG C N N 245 LYS CD C N N 246 LYS CE C N N 247 LYS NZ N N N 248 LYS OXT O N N 249 LYS H H N N 250 LYS H2 H N N 251 LYS HA H N N 252 LYS HB2 H N N 253 LYS HB3 H N N 254 LYS HG2 H N N 255 LYS HG3 H N N 256 LYS HD2 H N N 257 LYS HD3 H N N 258 LYS HE2 H N N 259 LYS HE3 H N N 260 LYS HZ1 H N N 261 LYS HZ2 H N N 262 LYS HZ3 H N N 263 LYS HXT H N N 264 MET N N N N 265 MET CA C N S 266 MET C C N N 267 MET O O N N 268 MET CB C N N 269 MET CG C N N 270 MET SD S N N 271 MET CE C N N 272 MET OXT O N N 273 MET H H N N 274 MET H2 H N N 275 MET HA H N N 276 MET HB2 H N N 277 MET HB3 H N N 278 MET HG2 H N N 279 MET HG3 H N N 280 MET HE1 H N N 281 MET HE2 H N N 282 MET HE3 H N N 283 MET HXT H N N 284 PHE N N N N 285 PHE CA C N S 286 PHE C C N N 287 PHE O O N N 288 PHE CB C N N 289 PHE CG C Y N 290 PHE CD1 C Y N 291 PHE CD2 C Y N 292 PHE CE1 C Y N 293 PHE CE2 C Y N 294 PHE CZ C Y N 295 PHE OXT O N N 296 PHE H H N N 297 PHE H2 H N N 298 PHE HA H N N 299 PHE HB2 H N N 300 PHE HB3 H N N 301 PHE HD1 H N N 302 PHE HD2 H N N 303 PHE HE1 H N N 304 PHE HE2 H N N 305 PHE HZ H N N 306 PHE HXT H N N 307 PRO N N N N 308 PRO CA C N S 309 PRO C C N N 310 PRO O O N N 311 PRO CB C N N 312 PRO CG C N N 313 PRO CD C N N 314 PRO OXT O N N 315 PRO H H N N 316 PRO HA H N N 317 PRO HB2 H N N 318 PRO HB3 H N N 319 PRO HG2 H N N 320 PRO HG3 H N N 321 PRO HD2 H N N 322 PRO HD3 H N N 323 PRO HXT H N N 324 SER N N N N 325 SER CA C N S 326 SER C C N N 327 SER O O N N 328 SER CB C N N 329 SER OG O N N 330 SER OXT O N N 331 SER H H N N 332 SER H2 H N N 333 SER HA H N N 334 SER HB2 H N N 335 SER HB3 H N N 336 SER HG H N N 337 SER HXT H N N 338 SGN C1 C N S 339 SGN C2 C N R 340 SGN C3 C N R 341 SGN C4 C N S 342 SGN C5 C N R 343 SGN C6 C N N 344 SGN N2 N N N 345 SGN O1 O N N 346 SGN O3 O N N 347 SGN O4 O N N 348 SGN O5 O N N 349 SGN O6 O N N 350 SGN S1 S N N 351 SGN O1S O N N 352 SGN O2S O N N 353 SGN O3S O N N 354 SGN S2 S N N 355 SGN O4S O N N 356 SGN O5S O N N 357 SGN O6S O N N 358 SGN H1 H N N 359 SGN H2 H N N 360 SGN H3 H N N 361 SGN H4 H N N 362 SGN H5 H N N 363 SGN H61 H N N 364 SGN H62 H N N 365 SGN HN21 H N N 366 SGN HO1 H N N 367 SGN HO3 H N N 368 SGN HO4 H N N 369 SGN HOS3 H N N 370 SGN HOS6 H N N 371 THR N N N N 372 THR CA C N S 373 THR C C N N 374 THR O O N N 375 THR CB C N R 376 THR OG1 O N N 377 THR CG2 C N N 378 THR OXT O N N 379 THR H H N N 380 THR H2 H N N 381 THR HA H N N 382 THR HB H N N 383 THR HG1 H N N 384 THR HG21 H N N 385 THR HG22 H N N 386 THR HG23 H N N 387 THR HXT H N N 388 TYR N N N N 389 TYR CA C N S 390 TYR C C N N 391 TYR O O N N 392 TYR CB C N N 393 TYR CG C Y N 394 TYR CD1 C Y N 395 TYR CD2 C Y N 396 TYR CE1 C Y N 397 TYR CE2 C Y N 398 TYR CZ C Y N 399 TYR OH O N N 400 TYR OXT O N N 401 TYR H H N N 402 TYR H2 H N N 403 TYR HA H N N 404 TYR HB2 H N N 405 TYR HB3 H N N 406 TYR HD1 H N N 407 TYR HD2 H N N 408 TYR HE1 H N N 409 TYR HE2 H N N 410 TYR HH H N N 411 TYR HXT H N N 412 VAL N N N N 413 VAL CA C N S 414 VAL C C N N 415 VAL O O N N 416 VAL CB C N N 417 VAL CG1 C N N 418 VAL CG2 C N N 419 VAL OXT O N N 420 VAL H H N N 421 VAL H2 H N N 422 VAL HA H N N 423 VAL HB H N N 424 VAL HG11 H N N 425 VAL HG12 H N N 426 VAL HG13 H N N 427 VAL HG21 H N N 428 VAL HG22 H N N 429 VAL HG23 H N N 430 VAL HXT H N N 431 ZN ZN ZN N N 432 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACY C O doub N N 1 ACY C OXT sing N N 2 ACY C CH3 sing N N 3 ACY OXT HXT sing N N 4 ACY CH3 H1 sing N N 5 ACY CH3 H2 sing N N 6 ACY CH3 H3 sing N N 7 ALA N CA sing N N 8 ALA N H sing N N 9 ALA N H2 sing N N 10 ALA CA C sing N N 11 ALA CA CB sing N N 12 ALA CA HA sing N N 13 ALA C O doub N N 14 ALA C OXT sing N N 15 ALA CB HB1 sing N N 16 ALA CB HB2 sing N N 17 ALA CB HB3 sing N N 18 ALA OXT HXT sing N N 19 ARG N CA sing N N 20 ARG N H sing N N 21 ARG N H2 sing N N 22 ARG CA C sing N N 23 ARG CA CB sing N N 24 ARG CA HA sing N N 25 ARG C O doub N N 26 ARG C OXT sing N N 27 ARG CB CG sing N N 28 ARG CB HB2 sing N N 29 ARG CB HB3 sing N N 30 ARG CG CD sing N N 31 ARG CG HG2 sing N N 32 ARG CG HG3 sing N N 33 ARG CD NE sing N N 34 ARG CD HD2 sing N N 35 ARG CD HD3 sing N N 36 ARG NE CZ sing N N 37 ARG NE HE sing N N 38 ARG CZ NH1 sing N N 39 ARG CZ NH2 doub N N 40 ARG NH1 HH11 sing N N 41 ARG NH1 HH12 sing N N 42 ARG NH2 HH21 sing N N 43 ARG NH2 HH22 sing N N 44 ARG OXT HXT sing N N 45 ASN N CA sing N N 46 ASN N H sing N N 47 ASN N H2 sing N N 48 ASN CA C sing N N 49 ASN CA CB sing N N 50 ASN CA HA sing N N 51 ASN C O doub N N 52 ASN C OXT sing N N 53 ASN CB CG sing N N 54 ASN CB HB2 sing N N 55 ASN CB HB3 sing N N 56 ASN CG OD1 doub N N 57 ASN CG ND2 sing N N 58 ASN ND2 HD21 sing N N 59 ASN ND2 HD22 sing N N 60 ASN OXT HXT sing N N 61 ASP N CA sing N N 62 ASP N H sing N N 63 ASP N H2 sing N N 64 ASP CA C sing N N 65 ASP CA CB sing N N 66 ASP CA HA sing N N 67 ASP C O doub N N 68 ASP C OXT sing N N 69 ASP CB CG sing N N 70 ASP CB HB2 sing N N 71 ASP CB HB3 sing N N 72 ASP CG OD1 doub N N 73 ASP CG OD2 sing N N 74 ASP OD2 HD2 sing N N 75 ASP OXT HXT sing N N 76 CYS N CA sing N N 77 CYS N H sing N N 78 CYS N H2 sing N N 79 CYS CA C sing N N 80 CYS CA CB sing N N 81 CYS CA HA sing N N 82 CYS C O doub N N 83 CYS C OXT sing N N 84 CYS CB SG sing N N 85 CYS CB HB2 sing N N 86 CYS CB HB3 sing N N 87 CYS SG HG sing N N 88 CYS OXT HXT sing N N 89 GLN N CA sing N N 90 GLN N H sing N N 91 GLN N H2 sing N N 92 GLN CA C sing N N 93 GLN CA CB sing N N 94 GLN CA HA sing N N 95 GLN C O doub N N 96 GLN C OXT sing N N 97 GLN CB CG sing N N 98 GLN CB HB2 sing N N 99 GLN CB HB3 sing N N 100 GLN CG CD sing N N 101 GLN CG HG2 sing N N 102 GLN CG HG3 sing N N 103 GLN CD OE1 doub N N 104 GLN CD NE2 sing N N 105 GLN NE2 HE21 sing N N 106 GLN NE2 HE22 sing N N 107 GLN OXT HXT sing N N 108 GLU N CA sing N N 109 GLU N H sing N N 110 GLU N H2 sing N N 111 GLU CA C sing N N 112 GLU CA CB sing N N 113 GLU CA HA sing N N 114 GLU C O doub N N 115 GLU C OXT sing N N 116 GLU CB CG sing N N 117 GLU CB HB2 sing N N 118 GLU CB HB3 sing N N 119 GLU CG CD sing N N 120 GLU CG HG2 sing N N 121 GLU CG HG3 sing N N 122 GLU CD OE1 doub N N 123 GLU CD OE2 sing N N 124 GLU OE2 HE2 sing N N 125 GLU OXT HXT sing N N 126 GLY N CA sing N N 127 GLY N H sing N N 128 GLY N H2 sing N N 129 GLY CA C sing N N 130 GLY CA HA2 sing N N 131 GLY CA HA3 sing N N 132 GLY C O doub N N 133 GLY C OXT sing N N 134 GLY OXT HXT sing N N 135 HIS N CA sing N N 136 HIS N H sing N N 137 HIS N H2 sing N N 138 HIS CA C sing N N 139 HIS CA CB sing N N 140 HIS CA HA sing N N 141 HIS C O doub N N 142 HIS C OXT sing N N 143 HIS CB CG sing N N 144 HIS CB HB2 sing N N 145 HIS CB HB3 sing N N 146 HIS CG ND1 sing Y N 147 HIS CG CD2 doub Y N 148 HIS ND1 CE1 doub Y N 149 HIS ND1 HD1 sing N N 150 HIS CD2 NE2 sing Y N 151 HIS CD2 HD2 sing N N 152 HIS CE1 NE2 sing Y N 153 HIS CE1 HE1 sing N N 154 HIS NE2 HE2 sing N N 155 HIS OXT HXT sing N N 156 HOH O H1 sing N N 157 HOH O H2 sing N N 158 IDS C1 C2 sing N N 159 IDS C1 O1 sing N N 160 IDS C1 O5 sing N N 161 IDS C1 H1 sing N N 162 IDS C2 C3 sing N N 163 IDS C2 O2 sing N N 164 IDS C2 H2 sing N N 165 IDS C3 C4 sing N N 166 IDS C3 O3 sing N N 167 IDS C3 H3 sing N N 168 IDS C4 C5 sing N N 169 IDS C4 O4 sing N N 170 IDS C4 H4 sing N N 171 IDS C5 C6 sing N N 172 IDS C5 O5 sing N N 173 IDS C5 H5 sing N N 174 IDS C6 O6A doub N N 175 IDS C6 O6B sing N N 176 IDS O1 HO1 sing N N 177 IDS O2 S sing N N 178 IDS O3 HO3 sing N N 179 IDS O4 HO4 sing N N 180 IDS O6B HO6B sing N N 181 IDS S O1S doub N N 182 IDS S O2S doub N N 183 IDS S O3S sing N N 184 IDS O3S HOS3 sing N N 185 ILE N CA sing N N 186 ILE N H sing N N 187 ILE N H2 sing N N 188 ILE CA C sing N N 189 ILE CA CB sing N N 190 ILE CA HA sing N N 191 ILE C O doub N N 192 ILE C OXT sing N N 193 ILE CB CG1 sing N N 194 ILE CB CG2 sing N N 195 ILE CB HB sing N N 196 ILE CG1 CD1 sing N N 197 ILE CG1 HG12 sing N N 198 ILE CG1 HG13 sing N N 199 ILE CG2 HG21 sing N N 200 ILE CG2 HG22 sing N N 201 ILE CG2 HG23 sing N N 202 ILE CD1 HD11 sing N N 203 ILE CD1 HD12 sing N N 204 ILE CD1 HD13 sing N N 205 ILE OXT HXT sing N N 206 LEU N CA sing N N 207 LEU N H sing N N 208 LEU N H2 sing N N 209 LEU CA C sing N N 210 LEU CA CB sing N N 211 LEU CA HA sing N N 212 LEU C O doub N N 213 LEU C OXT sing N N 214 LEU CB CG sing N N 215 LEU CB HB2 sing N N 216 LEU CB HB3 sing N N 217 LEU CG CD1 sing N N 218 LEU CG CD2 sing N N 219 LEU CG HG sing N N 220 LEU CD1 HD11 sing N N 221 LEU CD1 HD12 sing N N 222 LEU CD1 HD13 sing N N 223 LEU CD2 HD21 sing N N 224 LEU CD2 HD22 sing N N 225 LEU CD2 HD23 sing N N 226 LEU OXT HXT sing N N 227 LYS N CA sing N N 228 LYS N H sing N N 229 LYS N H2 sing N N 230 LYS CA C sing N N 231 LYS CA CB sing N N 232 LYS CA HA sing N N 233 LYS C O doub N N 234 LYS C OXT sing N N 235 LYS CB CG sing N N 236 LYS CB HB2 sing N N 237 LYS CB HB3 sing N N 238 LYS CG CD sing N N 239 LYS CG HG2 sing N N 240 LYS CG HG3 sing N N 241 LYS CD CE sing N N 242 LYS CD HD2 sing N N 243 LYS CD HD3 sing N N 244 LYS CE NZ sing N N 245 LYS CE HE2 sing N N 246 LYS CE HE3 sing N N 247 LYS NZ HZ1 sing N N 248 LYS NZ HZ2 sing N N 249 LYS NZ HZ3 sing N N 250 LYS OXT HXT sing N N 251 MET N CA sing N N 252 MET N H sing N N 253 MET N H2 sing N N 254 MET CA C sing N N 255 MET CA CB sing N N 256 MET CA HA sing N N 257 MET C O doub N N 258 MET C OXT sing N N 259 MET CB CG sing N N 260 MET CB HB2 sing N N 261 MET CB HB3 sing N N 262 MET CG SD sing N N 263 MET CG HG2 sing N N 264 MET CG HG3 sing N N 265 MET SD CE sing N N 266 MET CE HE1 sing N N 267 MET CE HE2 sing N N 268 MET CE HE3 sing N N 269 MET OXT HXT sing N N 270 PHE N CA sing N N 271 PHE N H sing N N 272 PHE N H2 sing N N 273 PHE CA C sing N N 274 PHE CA CB sing N N 275 PHE CA HA sing N N 276 PHE C O doub N N 277 PHE C OXT sing N N 278 PHE CB CG sing N N 279 PHE CB HB2 sing N N 280 PHE CB HB3 sing N N 281 PHE CG CD1 doub Y N 282 PHE CG CD2 sing Y N 283 PHE CD1 CE1 sing Y N 284 PHE CD1 HD1 sing N N 285 PHE CD2 CE2 doub Y N 286 PHE CD2 HD2 sing N N 287 PHE CE1 CZ doub Y N 288 PHE CE1 HE1 sing N N 289 PHE CE2 CZ sing Y N 290 PHE CE2 HE2 sing N N 291 PHE CZ HZ sing N N 292 PHE OXT HXT sing N N 293 PRO N CA sing N N 294 PRO N CD sing N N 295 PRO N H sing N N 296 PRO CA C sing N N 297 PRO CA CB sing N N 298 PRO CA HA sing N N 299 PRO C O doub N N 300 PRO C OXT sing N N 301 PRO CB CG sing N N 302 PRO CB HB2 sing N N 303 PRO CB HB3 sing N N 304 PRO CG CD sing N N 305 PRO CG HG2 sing N N 306 PRO CG HG3 sing N N 307 PRO CD HD2 sing N N 308 PRO CD HD3 sing N N 309 PRO OXT HXT sing N N 310 SER N CA sing N N 311 SER N H sing N N 312 SER N H2 sing N N 313 SER CA C sing N N 314 SER CA CB sing N N 315 SER CA HA sing N N 316 SER C O doub N N 317 SER C OXT sing N N 318 SER CB OG sing N N 319 SER CB HB2 sing N N 320 SER CB HB3 sing N N 321 SER OG HG sing N N 322 SER OXT HXT sing N N 323 SGN C1 C2 sing N N 324 SGN C1 O1 sing N N 325 SGN C1 O5 sing N N 326 SGN C1 H1 sing N N 327 SGN C2 C3 sing N N 328 SGN C2 N2 sing N N 329 SGN C2 H2 sing N N 330 SGN C3 C4 sing N N 331 SGN C3 O3 sing N N 332 SGN C3 H3 sing N N 333 SGN C4 C5 sing N N 334 SGN C4 O4 sing N N 335 SGN C4 H4 sing N N 336 SGN C5 C6 sing N N 337 SGN C5 O5 sing N N 338 SGN C5 H5 sing N N 339 SGN C6 O6 sing N N 340 SGN C6 H61 sing N N 341 SGN C6 H62 sing N N 342 SGN N2 S1 sing N N 343 SGN N2 HN21 sing N N 344 SGN O1 HO1 sing N N 345 SGN O3 HO3 sing N N 346 SGN O4 HO4 sing N N 347 SGN O6 S2 sing N N 348 SGN S1 O1S doub N N 349 SGN S1 O2S doub N N 350 SGN S1 O3S sing N N 351 SGN O3S HOS3 sing N N 352 SGN S2 O4S doub N N 353 SGN S2 O5S doub N N 354 SGN S2 O6S sing N N 355 SGN O6S HOS6 sing N N 356 THR N CA sing N N 357 THR N H sing N N 358 THR N H2 sing N N 359 THR CA C sing N N 360 THR CA CB sing N N 361 THR CA HA sing N N 362 THR C O doub N N 363 THR C OXT sing N N 364 THR CB OG1 sing N N 365 THR CB CG2 sing N N 366 THR CB HB sing N N 367 THR OG1 HG1 sing N N 368 THR CG2 HG21 sing N N 369 THR CG2 HG22 sing N N 370 THR CG2 HG23 sing N N 371 THR OXT HXT sing N N 372 TYR N CA sing N N 373 TYR N H sing N N 374 TYR N H2 sing N N 375 TYR CA C sing N N 376 TYR CA CB sing N N 377 TYR CA HA sing N N 378 TYR C O doub N N 379 TYR C OXT sing N N 380 TYR CB CG sing N N 381 TYR CB HB2 sing N N 382 TYR CB HB3 sing N N 383 TYR CG CD1 doub Y N 384 TYR CG CD2 sing Y N 385 TYR CD1 CE1 sing Y N 386 TYR CD1 HD1 sing N N 387 TYR CD2 CE2 doub Y N 388 TYR CD2 HD2 sing N N 389 TYR CE1 CZ doub Y N 390 TYR CE1 HE1 sing N N 391 TYR CE2 CZ sing Y N 392 TYR CE2 HE2 sing N N 393 TYR CZ OH sing N N 394 TYR OH HH sing N N 395 TYR OXT HXT sing N N 396 VAL N CA sing N N 397 VAL N H sing N N 398 VAL N H2 sing N N 399 VAL CA C sing N N 400 VAL CA CB sing N N 401 VAL CA HA sing N N 402 VAL C O doub N N 403 VAL C OXT sing N N 404 VAL CB CG1 sing N N 405 VAL CB CG2 sing N N 406 VAL CB HB sing N N 407 VAL CG1 HG11 sing N N 408 VAL CG1 HG12 sing N N 409 VAL CG1 HG13 sing N N 410 VAL CG2 HG21 sing N N 411 VAL CG2 HG22 sing N N 412 VAL CG2 HG23 sing N N 413 VAL OXT HXT sing N N 414 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero C 2 SGN 1 C SGN 1 D HEP 3 n C 2 IDS 2 C IDS 2 D HEP 3 n C 2 SGN 3 C SGN 3 D HEP 2 n C 2 IDS 4 C IDS 4 D HEP 2 n C 2 SGN 5 C SGN 5 D HEP 1 n C 2 IDS 6 C IDS 6 D HEP 1 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier IDS 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-IdopA2SO3 SGN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 'DGlcpNS[6S]a' SGN 'COMMON NAME' GMML 1.0 N-sulfo-6-sulfo-a-D-glucopyranose SGN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNSO36SO3 # _pdbx_entity_branch.entity_id 2 _pdbx_entity_branch.type oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'WURCS=2.0/2,6,5/[a2122h-1a_1-5_2*NSO/3=O/3=O_6*OSO/3=O/3=O][a2121A-1a_1-5_2*OSO/3=O/3=O]/1-2-1-2-1-2/a4-b1_b4-c1_c4-d1_d4-e1_e4-f1' WURCS PDB2Glycan 1.1.0 2 2 ;[][a-D-GlcpNSO36SO3]{[(4+1)][a-L-IdopA2SO3]{[(4+1)][a-D-GlcpNSO36SO3]{[(4+1)][a-L-IdopA2SO3]{[(4+1)][a-D-GlcpNSO36SO3]{[(4+1)][a-L-4-deoxy-IdopA2SO3]{}}}}}} ; LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 IDS C1 O1 1 SGN O4 HO4 sing ? 2 2 3 SGN C1 O1 2 IDS O4 HO4 sing ? 3 2 4 IDS C1 O1 3 SGN O4 HO4 sing ? 4 2 5 SGN C1 O1 4 IDS O4 HO4 sing ? 5 2 6 IDS C1 O1 5 SGN O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 SGN 1 n 2 IDS 2 n 2 SGN 3 n 2 IDS 4 n 2 SGN 5 n 2 IDS 6 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'ZINC ION' ZN 4 'ACETIC ACID' ACY 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2BWK _pdbx_initial_refinement_model.details ? #