HEADER HYDROLASE 28-MAY-14 4QHI TITLE CRYSTAL STRUCTURE OF METHANOCALDOCOCCUS JANNASCHII SELECASE MUTANT TITLE 2 R36W COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN MJ1213; COMPND 3 CHAIN: A, B, C, D; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_TAXID: 243232; SOURCE 4 STRAIN: ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440; SOURCE 5 GENE: MJ1213; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS MINIGLUZINCIN, PROTEOLYTIC ENZYME, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.LOPEZ-PELEGRIN,N.CERDA-COSTA,A.CINTAS-PEDROLA,F.HERRANZ-TRILLO, AUTHOR 2 P.BERNADO,J.R.PEINADO,J.L.AROLAS,F.X.GOMIS-RUTH REVDAT 4 03-APR-24 4QHI 1 REMARK REVDAT 3 20-MAR-24 4QHI 1 REMARK SEQADV LINK REVDAT 2 22-OCT-14 4QHI 1 JRNL REVDAT 1 16-JUL-14 4QHI 0 JRNL AUTH M.LOPEZ-PELEGRIN,N.CERDA-COSTA,A.CINTAS-PEDROLA, JRNL AUTH 2 F.HERRANZ-TRILLO,P.BERNADO,J.R.PEINADO,J.L.AROLAS, JRNL AUTH 3 F.X.GOMIS-RUTH JRNL TITL MULTIPLE STABLE CONFORMATIONS ACCOUNT FOR REVERSIBLE JRNL TITL 2 CONCENTRATION-DEPENDENT OLIGOMERIZATION AND AUTOINHIBITION JRNL TITL 3 OF A METAMORPHIC METALLOPEPTIDASE JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 53 10624 2014 JRNL REFN ISSN 1433-7851 JRNL PMID 25159620 JRNL DOI 10.1002/ANIE.201405727 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.5 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 25107 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.222 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.940 REMARK 3 FREE R VALUE TEST SET COUNT : 739 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 13 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.44 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2811 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2672 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2728 REMARK 3 BIN R VALUE (WORKING SET) : 0.2220 REMARK 3 BIN FREE R VALUE : 0.2470 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 2.95 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 739 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3618 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 29 REMARK 3 SOLVENT ATOMS : 149 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 48.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 61.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.54230 REMARK 3 B22 (A**2) : 10.56520 REMARK 3 B33 (A**2) : -9.02290 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -2.86870 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.401 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.316 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.927 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3702 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4973 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1821 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 107 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 486 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3702 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 5 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 506 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4285 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.11 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.67 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 3.51 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|2 - A|109 A|201 - A|201 } REMARK 3 ORIGIN FOR THE GROUP (A): 7.3712 46.8209 38.7578 REMARK 3 T TENSOR REMARK 3 T11: -0.1660 T22: -0.0813 REMARK 3 T33: 0.0157 T12: 0.0134 REMARK 3 T13: -0.0483 T23: 0.0192 REMARK 3 L TENSOR REMARK 3 L11: 1.4145 L22: 4.1623 REMARK 3 L33: 2.4987 L12: 0.2558 REMARK 3 L13: -0.1356 L23: 1.2211 REMARK 3 S TENSOR REMARK 3 S11: 0.1442 S12: -0.0910 S13: 0.0607 REMARK 3 S21: -0.1244 S22: -0.0775 S23: 0.0505 REMARK 3 S31: -0.1658 S32: -0.0498 S33: -0.0667 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { B|1 - B|109 B|201 - B|201 } REMARK 3 ORIGIN FOR THE GROUP (A): 20.6705 26.1538 34.4996 REMARK 3 T TENSOR REMARK 3 T11: -0.1418 T22: -0.0968 REMARK 3 T33: 0.0579 T12: -0.0139 REMARK 3 T13: 0.0060 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 2.6478 L22: 4.9654 REMARK 3 L33: 2.4691 L12: -0.6487 REMARK 3 L13: 0.6927 L23: 1.0468 REMARK 3 S TENSOR REMARK 3 S11: -0.0154 S12: 0.0280 S13: 0.0962 REMARK 3 S21: -0.1158 S22: -0.0094 S23: -0.4931 REMARK 3 S31: 0.1291 S32: 0.0784 S33: 0.0248 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: { C|4 - C|109 C|201 - C|201 } REMARK 3 ORIGIN FOR THE GROUP (A): 10.5821 15.9173 78.1832 REMARK 3 T TENSOR REMARK 3 T11: 0.3605 T22: 0.0827 REMARK 3 T33: -0.0056 T12: 0.1850 REMARK 3 T13: 0.1738 T23: 0.0317 REMARK 3 L TENSOR REMARK 3 L11: 1.5718 L22: 4.7996 REMARK 3 L33: 9.1865 L12: 0.3549 REMARK 3 L13: -0.4901 L23: -0.6438 REMARK 3 S TENSOR REMARK 3 S11: 0.0035 S12: 0.3547 S13: -0.0523 REMARK 3 S21: -0.3371 S22: -0.1737 S23: -0.2101 REMARK 3 S31: 1.1167 S32: 0.5877 S33: 0.1702 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: { D|3 - D|109 D|201 - D|201 } REMARK 3 ORIGIN FOR THE GROUP (A): -0.6235 36.1698 69.0874 REMARK 3 T TENSOR REMARK 3 T11: 0.0611 T22: 0.0637 REMARK 3 T33: 0.0390 T12: -0.0377 REMARK 3 T13: 0.0970 T23: -0.0263 REMARK 3 L TENSOR REMARK 3 L11: 2.6972 L22: 5.3598 REMARK 3 L33: 12.7244 L12: 1.2901 REMARK 3 L13: -1.2195 L23: -5.2258 REMARK 3 S TENSOR REMARK 3 S11: -0.0385 S12: -0.1339 S13: 0.0490 REMARK 3 S21: 0.1575 S22: -0.0064 S23: 0.3866 REMARK 3 S31: -0.0473 S32: 0.0441 S33: 0.0449 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QHI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 04-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000086061. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : SI(311) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25107 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 42.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.10100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 42.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.10100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 15.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: DIMERIC SELECASE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.73 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS-HCL, 0.15M NACL (OBTAINED REMARK 280 AFTER STORAGE AT 277K FOR ONE MONTH), PH 7.5, EVAPORATION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.54500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3340 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2640 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11750 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -53.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 110 REMARK 465 LYS B 110 REMARK 465 MET C 1 REMARK 465 LYS C 2 REMARK 465 ASP C 3 REMARK 465 LYS C 110 REMARK 465 MET D 1 REMARK 465 LYS D 2 REMARK 465 LYS D 110 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 3 -58.02 76.99 REMARK 500 LYS A 35 -119.19 56.61 REMARK 500 ASP B 22 -58.68 -25.22 REMARK 500 LYS B 35 66.11 -113.95 REMARK 500 TRP B 36 49.47 72.08 REMARK 500 TRP C 36 14.48 57.03 REMARK 500 ASN D 26 59.38 -95.43 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 69 NE2 REMARK 620 2 HIS A 73 NE2 114.4 REMARK 620 3 HIS A 80 NE2 107.0 102.0 REMARK 620 4 GOL A 202 O2 115.2 112.6 103.9 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 69 NE2 REMARK 620 2 HIS B 73 NE2 106.3 REMARK 620 3 HIS B 80 NE2 116.9 103.5 REMARK 620 4 HIS B 107 NE2 110.0 116.2 104.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 69 NE2 REMARK 620 2 HIS C 73 NE2 113.4 REMARK 620 3 HIS C 80 NE2 103.8 92.1 REMARK 620 4 GOL C 202 O2 120.7 111.7 111.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 69 NE2 REMARK 620 2 HIS D 73 NE2 103.1 REMARK 620 3 HIS D 80 NE2 118.2 102.8 REMARK 620 4 HIS D 107 NE2 114.6 106.3 110.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JIU RELATED DB: PDB REMARK 900 PYROCOCCUS ABYSSI ABYLYSIN REMARK 900 RELATED ID: 4JIX RELATED DB: PDB REMARK 900 METHANOCALDOCOCCUS JANNASCHII JANNALYSIN REMARK 900 RELATED ID: 4QHF RELATED DB: PDB REMARK 900 METHANOCALDOCOCCUS JANNASCHII MONOMERIC SELECASE REMARK 900 RELATED ID: 4QHG RELATED DB: PDB REMARK 900 METHANOCALDOCOCCUS JANNASCHII DIMERIC SELECASE REMARK 900 RELATED ID: 4QHH RELATED DB: PDB REMARK 900 METHANOCALDOCOCCUS JANNASCHII TETRAMERIC SELECASE REMARK 900 RELATED ID: 4QHJ RELATED DB: PDB REMARK 900 METHANOCALDOCOCCUS JANNASCHII SELECASE MUTANT I100F+H107F DBREF 4QHI A 1 110 UNP Q58610 Y1213_METJA 1 110 DBREF 4QHI B 1 110 UNP Q58610 Y1213_METJA 1 110 DBREF 4QHI C 1 110 UNP Q58610 Y1213_METJA 1 110 DBREF 4QHI D 1 110 UNP Q58610 Y1213_METJA 1 110 SEQADV 4QHI TRP A 36 UNP Q58610 ARG 36 ENGINEERED MUTATION SEQADV 4QHI TRP B 36 UNP Q58610 ARG 36 ENGINEERED MUTATION SEQADV 4QHI TRP C 36 UNP Q58610 ARG 36 ENGINEERED MUTATION SEQADV 4QHI TRP D 36 UNP Q58610 ARG 36 ENGINEERED MUTATION SEQRES 1 A 110 MET LYS ASP ARG LYS ILE LEU ASN GLU ILE LEU SER ASN SEQRES 2 A 110 THR ILE ASN GLU LEU ASN LEU ASN ASP LYS LYS ALA ASN SEQRES 3 A 110 ILE LYS ILE LYS ILE LYS PRO LEU LYS TRP LYS ILE ALA SEQRES 4 A 110 SER ILE SER LEU THR ASN LYS THR ILE TYR ILE ASN LYS SEQRES 5 A 110 ASN ILE LEU PRO TYR LEU SER ASP GLU GLU ILE ARG PHE SEQRES 6 A 110 ILE LEU ALA HIS GLU LEU LEU HIS LEU LYS TYR GLY LYS SEQRES 7 A 110 TYR HIS ILE ASN GLU PHE GLU GLU GLU LEU LEU PHE LEU SEQRES 8 A 110 PHE PRO ASN LYS GLU ALA ILE LEU ILE ASN LEU ILE ASN SEQRES 9 A 110 LYS LEU HIS GLN LYS LYS SEQRES 1 B 110 MET LYS ASP ARG LYS ILE LEU ASN GLU ILE LEU SER ASN SEQRES 2 B 110 THR ILE ASN GLU LEU ASN LEU ASN ASP LYS LYS ALA ASN SEQRES 3 B 110 ILE LYS ILE LYS ILE LYS PRO LEU LYS TRP LYS ILE ALA SEQRES 4 B 110 SER ILE SER LEU THR ASN LYS THR ILE TYR ILE ASN LYS SEQRES 5 B 110 ASN ILE LEU PRO TYR LEU SER ASP GLU GLU ILE ARG PHE SEQRES 6 B 110 ILE LEU ALA HIS GLU LEU LEU HIS LEU LYS TYR GLY LYS SEQRES 7 B 110 TYR HIS ILE ASN GLU PHE GLU GLU GLU LEU LEU PHE LEU SEQRES 8 B 110 PHE PRO ASN LYS GLU ALA ILE LEU ILE ASN LEU ILE ASN SEQRES 9 B 110 LYS LEU HIS GLN LYS LYS SEQRES 1 C 110 MET LYS ASP ARG LYS ILE LEU ASN GLU ILE LEU SER ASN SEQRES 2 C 110 THR ILE ASN GLU LEU ASN LEU ASN ASP LYS LYS ALA ASN SEQRES 3 C 110 ILE LYS ILE LYS ILE LYS PRO LEU LYS TRP LYS ILE ALA SEQRES 4 C 110 SER ILE SER LEU THR ASN LYS THR ILE TYR ILE ASN LYS SEQRES 5 C 110 ASN ILE LEU PRO TYR LEU SER ASP GLU GLU ILE ARG PHE SEQRES 6 C 110 ILE LEU ALA HIS GLU LEU LEU HIS LEU LYS TYR GLY LYS SEQRES 7 C 110 TYR HIS ILE ASN GLU PHE GLU GLU GLU LEU LEU PHE LEU SEQRES 8 C 110 PHE PRO ASN LYS GLU ALA ILE LEU ILE ASN LEU ILE ASN SEQRES 9 C 110 LYS LEU HIS GLN LYS LYS SEQRES 1 D 110 MET LYS ASP ARG LYS ILE LEU ASN GLU ILE LEU SER ASN SEQRES 2 D 110 THR ILE ASN GLU LEU ASN LEU ASN ASP LYS LYS ALA ASN SEQRES 3 D 110 ILE LYS ILE LYS ILE LYS PRO LEU LYS TRP LYS ILE ALA SEQRES 4 D 110 SER ILE SER LEU THR ASN LYS THR ILE TYR ILE ASN LYS SEQRES 5 D 110 ASN ILE LEU PRO TYR LEU SER ASP GLU GLU ILE ARG PHE SEQRES 6 D 110 ILE LEU ALA HIS GLU LEU LEU HIS LEU LYS TYR GLY LYS SEQRES 7 D 110 TYR HIS ILE ASN GLU PHE GLU GLU GLU LEU LEU PHE LEU SEQRES 8 D 110 PHE PRO ASN LYS GLU ALA ILE LEU ILE ASN LEU ILE ASN SEQRES 9 D 110 LYS LEU HIS GLN LYS LYS HET ZN A 201 1 HET GOL A 202 6 HET CL A 203 1 HET ZN B 201 1 HET GOL B 202 6 HET GOL B 203 6 HET ZN C 201 1 HET GOL C 202 6 HET ZN D 201 1 HETNAM ZN ZINC ION HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 5 ZN 4(ZN 2+) FORMUL 6 GOL 4(C3 H8 O3) FORMUL 7 CL CL 1- FORMUL 14 HOH *149(H2 O) HELIX 1 1 ASP A 3 LEU A 18 1 16 HELIX 2 2 ILE A 54 LEU A 58 5 5 HELIX 3 3 SER A 59 GLY A 77 1 19 HELIX 4 4 ILE A 81 PHE A 92 1 12 HELIX 5 5 ASN A 94 LYS A 109 1 16 HELIX 6 6 ASP B 3 LEU B 18 1 16 HELIX 7 7 ILE B 54 LEU B 58 5 5 HELIX 8 8 SER B 59 GLY B 77 1 19 HELIX 9 9 ILE B 81 PHE B 92 1 12 HELIX 10 10 PRO B 93 GLU B 96 5 4 HELIX 11 11 ILE B 98 LYS B 105 1 8 HELIX 12 12 LYS C 5 ASN C 19 1 15 HELIX 13 13 LEU C 20 LYS C 24 5 5 HELIX 14 14 ILE C 54 LEU C 58 5 5 HELIX 15 15 SER C 59 GLY C 77 1 19 HELIX 16 16 ILE C 81 PHE C 92 1 12 HELIX 17 17 ASN C 94 LYS C 109 1 16 HELIX 18 18 ARG D 4 LEU D 18 1 15 HELIX 19 19 ASN D 21 ASN D 26 1 6 HELIX 20 20 ILE D 54 LEU D 58 5 5 HELIX 21 21 SER D 59 GLY D 77 1 19 HELIX 22 22 ILE D 81 PHE D 92 1 12 HELIX 23 23 PRO D 93 GLU D 96 5 4 HELIX 24 24 ILE D 98 LYS D 105 1 8 SHEET 1 A 3 LYS A 28 LYS A 32 0 SHEET 2 A 3 THR A 47 ASN A 51 1 O ILE A 48 N LYS A 30 SHEET 3 A 3 ALA A 39 SER A 42 -1 N SER A 40 O TYR A 49 SHEET 1 B 3 LYS B 28 LYS B 32 0 SHEET 2 B 3 THR B 47 ASN B 51 1 O ILE B 48 N LYS B 28 SHEET 3 B 3 ALA B 39 SER B 42 -1 N SER B 42 O THR B 47 SHEET 1 C 3 LYS C 28 LYS C 32 0 SHEET 2 C 3 THR C 47 ASN C 51 1 O ILE C 48 N LYS C 30 SHEET 3 C 3 ALA C 39 SER C 42 -1 N SER C 40 O TYR C 49 SHEET 1 D 3 LYS D 28 LYS D 32 0 SHEET 2 D 3 THR D 47 ASN D 51 1 O ILE D 48 N LYS D 28 SHEET 3 D 3 ALA D 39 ILE D 41 -1 N SER D 40 O TYR D 49 LINK NE2 HIS A 69 ZN ZN A 201 1555 1555 2.03 LINK NE2 HIS A 73 ZN ZN A 201 1555 1555 1.91 LINK NE2 HIS A 80 ZN ZN A 201 1555 1555 2.04 LINK ZN ZN A 201 O2 GOL A 202 1555 1555 2.01 LINK NE2 HIS B 69 ZN ZN B 201 1555 1555 1.98 LINK NE2 HIS B 73 ZN ZN B 201 1555 1555 2.03 LINK NE2 HIS B 80 ZN ZN B 201 1555 1555 1.92 LINK NE2 HIS B 107 ZN ZN B 201 1555 1555 1.96 LINK NE2 HIS C 69 ZN ZN C 201 1555 1555 1.93 LINK NE2 HIS C 73 ZN ZN C 201 1555 1555 2.01 LINK NE2 HIS C 80 ZN ZN C 201 1555 1555 2.25 LINK ZN ZN C 201 O2 GOL C 202 1555 1555 2.44 LINK NE2 HIS D 69 ZN ZN D 201 1555 1555 1.99 LINK NE2 HIS D 73 ZN ZN D 201 1555 1555 2.09 LINK NE2 HIS D 80 ZN ZN D 201 1555 1555 1.90 LINK NE2 HIS D 107 ZN ZN D 201 1555 1555 1.92 SITE 1 AC1 4 HIS A 69 HIS A 73 HIS A 80 GOL A 202 SITE 1 AC2 9 ALA A 39 ILE A 41 HIS A 69 GLU A 70 SITE 2 AC2 9 HIS A 73 HIS A 80 ZN A 201 HOH A 323 SITE 3 AC2 9 PRO B 56 SITE 1 AC3 1 LYS A 32 SITE 1 AC4 4 HIS B 69 HIS B 73 HIS B 80 HIS B 107 SITE 1 AC5 4 LYS B 78 TYR B 79 HIS B 80 GLU C 83 SITE 1 AC6 3 GLU B 86 GLU B 87 PHE B 90 SITE 1 AC7 4 HIS C 69 HIS C 73 HIS C 80 GOL C 202 SITE 1 AC8 8 ALA C 39 ILE C 41 HIS C 69 GLU C 70 SITE 2 AC8 8 HIS C 73 ZN C 201 PRO D 56 TYR D 57 SITE 1 AC9 4 HIS D 69 HIS D 73 HIS D 80 HIS D 107 CRYST1 37.690 101.090 76.470 90.00 99.83 90.00 P 1 21 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026532 0.000000 0.004597 0.00000 SCALE2 0.000000 0.009892 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013272 0.00000