HEADER SIGNALING PROTEIN 31-MAY-14 4QIM TITLE STRUCTURE OF THE HUMAN SMOOTHENED RECEPTOR IN COMPLEX WITH ANTA XV COMPND MOL_ID: 1; COMPND 2 MOLECULE: SMOOTHENED HOMOLOG/SOLUBLE CYTOCHROME B562 CHIMERIC COMPND 3 PROTEIN; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: UNP Q99835 RESIDUES 190-433, P0ABE7 RESIDUES 23-128, Q99835 COMPND 6 RESIDUES 441-555; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 9606, 562; SOURCE 4 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: SF9; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PFASTBAC KEYWDS HUMAN SMOOTHENED RECEPTOR, ANTITUMOR AGENT, NOVEL PROTEIN KEYWDS 2 ENGINEERING, GPCR NETWORK, PSI-BIOLOGY, STRUCTURAL GENOMICS, KEYWDS 3 MEMBRANE PROTEIN, GPCR, MEMBRANE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR C.WANG,H.WU,T.EVRON,E.VARDY,G.W.HAN,X.-P.HUANG,S.J.HUFEISEN, AUTHOR 2 T.J.MANGANO,D.J.URBAN,V.KATRITCH,V.CHEREZOV,M.G.CARON,B.L.ROTH, AUTHOR 3 R.C.STEVENS,GPCR NETWORK (GPCR) REVDAT 6 16-OCT-24 4QIM 1 REMARK REVDAT 5 20-SEP-23 4QIM 1 REMARK SEQADV REVDAT 4 22-NOV-17 4QIM 1 REMARK REVDAT 3 02-AUG-17 4QIM 1 SOURCE REMARK REVDAT 2 13-AUG-14 4QIM 1 JRNL REVDAT 1 23-JUL-14 4QIM 0 JRNL AUTH C.WANG,H.WU,T.EVRON,E.VARDY,G.W.HAN,X.P.HUANG,S.J.HUFEISEN, JRNL AUTH 2 T.J.MANGANO,D.J.URBAN,V.KATRITCH,V.CHEREZOV,M.G.CARON, JRNL AUTH 3 B.L.ROTH,R.C.STEVENS JRNL TITL STRUCTURAL BASIS FOR SMOOTHENED RECEPTOR MODULATION AND JRNL TITL 2 CHEMORESISTANCE TO ANTICANCER DRUGS. JRNL REF NAT COMMUN V. 5 4355 2014 JRNL REFN ESSN 2041-1723 JRNL PMID 25008467 JRNL DOI 10.1038/NCOMMS5355 REMARK 2 REMARK 2 RESOLUTION. 2.61 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.64 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 17377 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.263 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 901 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 9 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.77 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.99 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2320 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2275 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2178 REMARK 3 BIN R VALUE (WORKING SET) : 0.2205 REMARK 3 BIN FREE R VALUE : 0.3379 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.12 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 142 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3519 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 23 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 79.08 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 97.89 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.87370 REMARK 3 B22 (A**2) : -11.84470 REMARK 3 B33 (A**2) : 13.71850 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.466 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.640 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3650 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 4980 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1622 ; 4.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 69 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 539 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3650 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 483 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : 2 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4377 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.35 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.57 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|190 - A|553 } REMARK 3 ORIGIN FOR THE GROUP (A): 15.2152 -10.5374 -33.3500 REMARK 3 T TENSOR REMARK 3 T11: -0.1493 T22: 0.1149 REMARK 3 T33: -0.3054 T12: -0.1116 REMARK 3 T13: -0.0333 T23: 0.0823 REMARK 3 L TENSOR REMARK 3 L11: 0.9208 L22: 0.5652 REMARK 3 L33: 4.1131 L12: 0.0139 REMARK 3 L13: 0.2798 L23: -0.5485 REMARK 3 S TENSOR REMARK 3 S11: -0.1378 S12: 0.0705 S13: 0.0047 REMARK 3 S21: -0.1188 S22: 0.0341 S23: -0.0329 REMARK 3 S31: -0.1481 S32: -0.1085 S33: 0.1037 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: { A|1001 - A|1106 } REMARK 3 ORIGIN FOR THE GROUP (A): -14.0532 -7.7742 -84.2355 REMARK 3 T TENSOR REMARK 3 T11: -0.1036 T22: 0.0990 REMARK 3 T33: -0.3589 T12: -0.1613 REMARK 3 T13: 0.0988 T23: -0.0994 REMARK 3 L TENSOR REMARK 3 L11: 1.3363 L22: 8.7400 REMARK 3 L33: 4.0699 L12: 1.5482 REMARK 3 L13: 0.6437 L23: -0.5135 REMARK 3 S TENSOR REMARK 3 S11: -0.0394 S12: -0.0094 S13: -0.0772 REMARK 3 S21: -0.4273 S22: 0.0491 S23: -0.0318 REMARK 3 S31: 0.3597 S32: 0.0143 S33: -0.0097 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4QIM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000086101. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 6 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.033 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17421 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 35.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.72300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: TWO INDEPENDENT SEARCH MODELS OF SMO AND BRIL REMARK 200 DOMAINS FROM PDB ENTRY 4JKV REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.67 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100-115MM NH4CL, 100MM HEPES PH7.2, REMARK 280 36% PEG400, LIPIDIC CUBIC PHASE (LCP), TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.41500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.03500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.92000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.03500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.41500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.92000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS UNKNOWN REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 187 REMARK 465 GLY A 188 REMARK 465 THR A 189 REMARK 465 GLY A 347 REMARK 465 THR A 348 REMARK 465 THR A 349 REMARK 465 TYR A 350 REMARK 465 GLN A 351 REMARK 465 PRO A 352 REMARK 465 GLY A 554 REMARK 465 GLN A 555 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 194 CG CD OE1 OE2 REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 261 CG CD NE CZ NH1 NH2 REMARK 470 SER A 354 OG REMARK 470 LYS A 356 CG CD CE NZ REMARK 470 ASN A 432 OD1 ND2 REMARK 470 GLU A1004 CG CD OE1 OE2 REMARK 470 ASP A1005 CG OD1 OD2 REMARK 470 LYS A1042 CD CE NZ REMARK 470 LYS A1047 CG CD CE NZ REMARK 470 LEU A1048 CG CD1 CD2 REMARK 470 GLU A1049 CG CD OE1 OE2 REMARK 470 ASP A1050 CG OD1 OD2 REMARK 470 LYS A1051 CG CD CE NZ REMARK 470 ASP A1054 CG OD1 OD2 REMARK 470 LYS A1059 CG CD CE NZ REMARK 470 LEU A1106 CG CD1 CD2 REMARK 470 SER A 443 OG REMARK 470 LYS A 444 CG CD CE NZ REMARK 470 GLU A 447 CG CD OE1 OE2 REMARK 470 ARG A 482 CZ NH1 NH2 REMARK 470 THR A 495 OG1 CG2 REMARK 470 GLU A 508 CG CD OE1 OE2 REMARK 470 LYS A 539 CG CD CE NZ REMARK 470 ARG A 546 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 547 CZ NH1 NH2 REMARK 470 LEU A 552 CG CD1 CD2 REMARK 470 THR A 553 OG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 196 30.44 -98.55 REMARK 500 GLU A 208 -112.00 39.81 REMARK 500 ASN A 219 114.07 -25.82 REMARK 500 ASP A 287 112.78 -38.64 REMARK 500 ASN A 309 -5.03 72.76 REMARK 500 ALA A 379 70.01 47.03 REMARK 500 VAL A 404 -61.70 -127.51 REMARK 500 PRO A 513 151.73 -48.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1202 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 433 NE2 REMARK 620 2 HOH A1311 O 85.0 REMARK 620 3 HOH A1312 O 117.7 114.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A8T A 1201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4O9R RELATED DB: PDB REMARK 900 HUMAN SMOOTHENED RECEPTOR STRUCTURE IN COMPLEX WITH CYCLOPAMINE REMARK 900 RELATED ID: GPCR-131 RELATED DB: TARGETTRACK REMARK 900 RELATED ID: 4QIN RELATED DB: PDB DBREF 4QIM A 190 433 UNP Q99835 SMO_HUMAN 190 433 DBREF 4QIM A 1001 1106 UNP P0ABE7 C562_ECOLX 23 128 DBREF 4QIM A 441 555 UNP Q99835 SMO_HUMAN 441 555 SEQADV 4QIM GLY A 187 UNP Q99835 EXPRESSION TAG SEQADV 4QIM GLY A 188 UNP Q99835 EXPRESSION TAG SEQADV 4QIM THR A 189 UNP Q99835 EXPRESSION TAG SEQADV 4QIM TRP A 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION SEQADV 4QIM ILE A 1102 UNP P0ABE7 HIS 124 ENGINEERED MUTATION SEQADV 4QIM LEU A 1106 UNP P0ABE7 ARG 128 ENGINEERED MUTATION SEQRES 1 A 468 GLY GLY THR SER GLY GLN CYS GLU VAL PRO LEU VAL ARG SEQRES 2 A 468 THR ASP ASN PRO LYS SER TRP TYR GLU ASP VAL GLU GLY SEQRES 3 A 468 CYS GLY ILE GLN CYS GLN ASN PRO LEU PHE THR GLU ALA SEQRES 4 A 468 GLU HIS GLN ASP MET HIS SER TYR ILE ALA ALA PHE GLY SEQRES 5 A 468 ALA VAL THR GLY LEU CYS THR LEU PHE THR LEU ALA THR SEQRES 6 A 468 PHE VAL ALA ASP TRP ARG ASN SER ASN ARG TYR PRO ALA SEQRES 7 A 468 VAL ILE LEU PHE TYR VAL ASN ALA CYS PHE PHE VAL GLY SEQRES 8 A 468 SER ILE GLY TRP LEU ALA GLN PHE MET ASP GLY ALA ARG SEQRES 9 A 468 ARG GLU ILE VAL CYS ARG ALA ASP GLY THR MET ARG LEU SEQRES 10 A 468 GLY GLU PRO THR SER ASN GLU THR LEU SER CYS VAL ILE SEQRES 11 A 468 ILE PHE VAL ILE VAL TYR TYR ALA LEU MET ALA GLY VAL SEQRES 12 A 468 VAL TRP PHE VAL VAL LEU THR TYR ALA TRP HIS THR SER SEQRES 13 A 468 PHE LYS ALA LEU GLY THR THR TYR GLN PRO LEU SER GLY SEQRES 14 A 468 LYS THR SER TYR PHE HIS LEU LEU THR TRP SER LEU PRO SEQRES 15 A 468 PHE VAL LEU THR VAL ALA ILE LEU ALA VAL ALA GLN VAL SEQRES 16 A 468 ASP GLY ASP SER VAL SER GLY ILE CYS PHE VAL GLY TYR SEQRES 17 A 468 LYS ASN TYR ARG TYR ARG ALA GLY PHE VAL LEU ALA PRO SEQRES 18 A 468 ILE GLY LEU VAL LEU ILE VAL GLY GLY TYR PHE LEU ILE SEQRES 19 A 468 ARG GLY VAL MET THR LEU PHE SER ILE LYS SER ASN HIS SEQRES 20 A 468 ALA ASP LEU GLU ASP ASN TRP GLU THR LEU ASN ASP ASN SEQRES 21 A 468 LEU LYS VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL SEQRES 22 A 468 LYS ASP ALA LEU THR LYS MET ARG ALA ALA ALA LEU ASP SEQRES 23 A 468 ALA GLN LYS ALA THR PRO PRO LYS LEU GLU ASP LYS SER SEQRES 24 A 468 PRO ASP SER PRO GLU MET LYS ASP PHE ARG HIS GLY PHE SEQRES 25 A 468 ASP ILE LEU VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU SEQRES 26 A 468 ALA ASN GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA SEQRES 27 A 468 GLU GLN LEU LYS THR THR ARG ASN ALA TYR ILE GLN LYS SEQRES 28 A 468 TYR LEU ALA ALA SER LYS ILE ASN GLU THR MET LEU ARG SEQRES 29 A 468 LEU GLY ILE PHE GLY PHE LEU ALA PHE GLY PHE VAL LEU SEQRES 30 A 468 ILE THR PHE SER CYS HIS PHE TYR ASP PHE PHE ASN GLN SEQRES 31 A 468 ALA GLU TRP GLU ARG SER PHE ARG ASP TYR VAL LEU CYS SEQRES 32 A 468 GLN ALA ASN VAL THR ILE GLY LEU PRO THR LYS GLN PRO SEQRES 33 A 468 ILE PRO ASP CYS GLU ILE LYS ASN ARG PRO SER LEU LEU SEQRES 34 A 468 VAL GLU LYS ILE ASN LEU PHE ALA MET PHE GLY THR GLY SEQRES 35 A 468 ILE ALA MET SER THR TRP VAL TRP THR LYS ALA THR LEU SEQRES 36 A 468 LEU ILE TRP ARG ARG THR TRP CYS ARG LEU THR GLY GLN HET A8T A1201 33 HET ZN A1202 1 HETNAM A8T 2-{6-[4-(4-BENZYLPHTHALAZIN-1-YL)PIPERAZIN-1- HETNAM 2 A8T YL]PYRIDIN-3-YL}PROPAN-2-OL HETNAM ZN ZINC ION FORMUL 2 A8T C27 H29 N5 O FORMUL 3 ZN ZN 2+ FORMUL 4 HOH *23(H2 O) HELIX 1 1 ASN A 202 TRP A 206 5 5 HELIX 2 2 THR A 223 ASP A 255 1 33 HELIX 3 3 ASP A 255 ASN A 260 1 6 HELIX 4 4 VAL A 265 ALA A 283 1 19 HELIX 5 5 GLN A 284 MET A 286 5 3 HELIX 6 6 GLY A 288 CYS A 295 1 8 HELIX 7 7 LEU A 312 SER A 342 1 31 HELIX 8 8 PHE A 343 ALA A 345 5 3 HELIX 9 9 LYS A 356 ALA A 379 1 24 HELIX 10 10 ASN A 396 VAL A 404 1 9 HELIX 11 11 VAL A 404 LYS A 1019 1 49 HELIX 12 12 ASN A 1022 ALA A 1043 1 22 HELIX 13 13 PRO A 1045 GLU A 1049 5 5 HELIX 14 14 SER A 1055 GLY A 1082 1 28 HELIX 15 15 VAL A 1084 ILE A 1102 1 19 HELIX 16 16 ILE A 1102 ALA A 442 1 7 HELIX 17 17 ASN A 446 ALA A 492 1 47 HELIX 18 18 SER A 514 THR A 534 1 21 HELIX 19 19 TRP A 535 TRP A 537 5 3 HELIX 20 20 THR A 538 THR A 553 1 16 SHEET 1 A 2 LEU A 197 ARG A 199 0 SHEET 2 A 2 CYS A 213 ILE A 215 -1 O GLY A 214 N VAL A 198 SHEET 1 B 2 VAL A 381 ASP A 384 0 SHEET 2 B 2 ILE A 389 VAL A 392 -1 O PHE A 391 N ASP A 382 SSBOND 1 CYS A 193 CYS A 213 1555 1555 2.03 SSBOND 2 CYS A 217 CYS A 295 1555 1555 2.03 SSBOND 3 CYS A 314 CYS A 390 1555 1555 2.04 SSBOND 4 CYS A 490 CYS A 507 1555 1555 2.05 LINK NE2 HIS A 433 ZN ZN A1202 1555 1555 2.09 LINK ZN ZN A1202 O HOH A1311 1555 1555 2.22 LINK ZN ZN A1202 O HOH A1312 1555 1555 2.23 CISPEP 1 VAL A 195 PRO A 196 0 10.66 CISPEP 2 TYR A 262 PRO A 263 0 5.04 CISPEP 3 GLU A 305 PRO A 306 0 3.76 SITE 1 AC1 14 ASN A 219 LEU A 221 TRP A 281 ASP A 384 SITE 2 AC1 14 VAL A 386 PHE A 391 TYR A 394 LYS A 395 SITE 3 AC1 14 ARG A 400 HIS A 470 ASP A 473 GLN A 477 SITE 4 AC1 14 GLU A 518 ASN A 521 SITE 1 AC2 4 HIS A 433 ASP A1021 HOH A1311 HOH A1312 CRYST1 42.830 79.840 170.070 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.023348 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012525 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005880 0.00000