HEADER SIGNALING PROTEIN 31-MAY-14 4QIM
TITLE STRUCTURE OF THE HUMAN SMOOTHENED RECEPTOR IN COMPLEX WITH ANTA XV
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SMOOTHENED HOMOLOG/SOLUBLE CYTOCHROME B562 CHIMERIC
COMPND 3 PROTEIN;
COMPND 4 CHAIN: A;
COMPND 5 FRAGMENT: UNP Q99835 RESIDUES 190-433, P0ABE7 RESIDUES 23-128, Q99835
COMPND 6 RESIDUES 441-555;
COMPND 7 ENGINEERED: YES;
COMPND 8 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS, ESCHERICHIA COLI;
SOURCE 3 ORGANISM_TAXID: 9606, 562;
SOURCE 4 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 5 EXPRESSION_SYSTEM_TAXID: 7108;
SOURCE 6 EXPRESSION_SYSTEM_STRAIN: SF9;
SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PFASTBAC
KEYWDS HUMAN SMOOTHENED RECEPTOR, ANTITUMOR AGENT, NOVEL PROTEIN
KEYWDS 2 ENGINEERING, GPCR NETWORK, PSI-BIOLOGY, STRUCTURAL GENOMICS,
KEYWDS 3 MEMBRANE PROTEIN, GPCR, MEMBRANE, SIGNALING PROTEIN
EXPDTA X-RAY DIFFRACTION
AUTHOR C.WANG,H.WU,T.EVRON,E.VARDY,G.W.HAN,X.-P.HUANG,S.J.HUFEISEN,
AUTHOR 2 T.J.MANGANO,D.J.URBAN,V.KATRITCH,V.CHEREZOV,M.G.CARON,B.L.ROTH,
AUTHOR 3 R.C.STEVENS,GPCR NETWORK (GPCR)
REVDAT 6 16-OCT-24 4QIM 1 REMARK
REVDAT 5 20-SEP-23 4QIM 1 REMARK SEQADV
REVDAT 4 22-NOV-17 4QIM 1 REMARK
REVDAT 3 02-AUG-17 4QIM 1 SOURCE REMARK
REVDAT 2 13-AUG-14 4QIM 1 JRNL
REVDAT 1 23-JUL-14 4QIM 0
JRNL AUTH C.WANG,H.WU,T.EVRON,E.VARDY,G.W.HAN,X.P.HUANG,S.J.HUFEISEN,
JRNL AUTH 2 T.J.MANGANO,D.J.URBAN,V.KATRITCH,V.CHEREZOV,M.G.CARON,
JRNL AUTH 3 B.L.ROTH,R.C.STEVENS
JRNL TITL STRUCTURAL BASIS FOR SMOOTHENED RECEPTOR MODULATION AND
JRNL TITL 2 CHEMORESISTANCE TO ANTICANCER DRUGS.
JRNL REF NAT COMMUN V. 5 4355 2014
JRNL REFN ESSN 2041-1723
JRNL PMID 25008467
JRNL DOI 10.1038/NCOMMS5355
REMARK 2
REMARK 2 RESOLUTION. 2.61 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.10.0
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.64
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0
REMARK 3 NUMBER OF REFLECTIONS : 17377
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.226
REMARK 3 R VALUE (WORKING SET) : 0.223
REMARK 3 FREE R VALUE : 0.263
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190
REMARK 3 FREE R VALUE TEST SET COUNT : 901
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 9
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.61
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.77
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.99
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2320
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2275
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2178
REMARK 3 BIN R VALUE (WORKING SET) : 0.2205
REMARK 3 BIN FREE R VALUE : 0.3379
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 6.12
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 142
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 3519
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 34
REMARK 3 SOLVENT ATOMS : 23
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 79.08
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 97.89
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -1.87370
REMARK 3 B22 (A**2) : -11.84470
REMARK 3 B33 (A**2) : 13.71850
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.466
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.640
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.934
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 3650 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 4980 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 1622 ; 4.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 69 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 539 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 3650 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 483 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : 2 ; 1.000 ; HARMONIC
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 4377 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 0.97
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.35
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.57
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 2
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|190 - A|553 }
REMARK 3 ORIGIN FOR THE GROUP (A): 15.2152 -10.5374 -33.3500
REMARK 3 T TENSOR
REMARK 3 T11: -0.1493 T22: 0.1149
REMARK 3 T33: -0.3054 T12: -0.1116
REMARK 3 T13: -0.0333 T23: 0.0823
REMARK 3 L TENSOR
REMARK 3 L11: 0.9208 L22: 0.5652
REMARK 3 L33: 4.1131 L12: 0.0139
REMARK 3 L13: 0.2798 L23: -0.5485
REMARK 3 S TENSOR
REMARK 3 S11: -0.1378 S12: 0.0705 S13: 0.0047
REMARK 3 S21: -0.1188 S22: 0.0341 S23: -0.0329
REMARK 3 S31: -0.1481 S32: -0.1085 S33: 0.1037
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { A|1001 - A|1106 }
REMARK 3 ORIGIN FOR THE GROUP (A): -14.0532 -7.7742 -84.2355
REMARK 3 T TENSOR
REMARK 3 T11: -0.1036 T22: 0.0990
REMARK 3 T33: -0.3589 T12: -0.1613
REMARK 3 T13: 0.0988 T23: -0.0994
REMARK 3 L TENSOR
REMARK 3 L11: 1.3363 L22: 8.7400
REMARK 3 L33: 4.0699 L12: 1.5482
REMARK 3 L13: 0.6437 L23: -0.5135
REMARK 3 S TENSOR
REMARK 3 S11: -0.0394 S12: -0.0094 S13: -0.0772
REMARK 3 S21: -0.4273 S22: 0.0491 S23: -0.0318
REMARK 3 S31: 0.3597 S32: 0.0143 S33: -0.0097
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4QIM COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUN-14.
REMARK 100 THE DEPOSITION ID IS D_1000086101.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : MAY-13
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 7.2
REMARK 200 NUMBER OF CRYSTALS USED : 6
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 23-ID-D
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 1.033
REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL
REMARK 200 OPTICS : MIRRORS
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000
REMARK 200 DATA SCALING SOFTWARE : HKL-2000
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17421
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4
REMARK 200 DATA REDUNDANCY : 7.700
REMARK 200 R MERGE (I) : 0.09100
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 35.0000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69
REMARK 200 COMPLETENESS FOR SHELL (%) : 80.6
REMARK 200 DATA REDUNDANCY IN SHELL : 6.30
REMARK 200 R MERGE FOR SHELL (I) : 0.72300
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: TWO INDEPENDENT SEARCH MODELS OF SMO AND BRIL
REMARK 200 DOMAINS FROM PDB ENTRY 4JKV
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 55.67
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 100-115MM NH4CL, 100MM HEPES PH7.2,
REMARK 280 36% PEG400, LIPIDIC CUBIC PHASE (LCP), TEMPERATURE 293K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 21.41500
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.03500
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.92000
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 85.03500
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 21.41500
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.92000
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 300 REMARK: AUTHORS STATE THAT THE BIOLOGICAL UNIT IS UNKNOWN
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 GLY A 187
REMARK 465 GLY A 188
REMARK 465 THR A 189
REMARK 465 GLY A 347
REMARK 465 THR A 348
REMARK 465 THR A 349
REMARK 465 TYR A 350
REMARK 465 GLN A 351
REMARK 465 PRO A 352
REMARK 465 GLY A 554
REMARK 465 GLN A 555
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 GLU A 194 CG CD OE1 OE2
REMARK 470 ARG A 257 CG CD NE CZ NH1 NH2
REMARK 470 ARG A 261 CG CD NE CZ NH1 NH2
REMARK 470 SER A 354 OG
REMARK 470 LYS A 356 CG CD CE NZ
REMARK 470 ASN A 432 OD1 ND2
REMARK 470 GLU A1004 CG CD OE1 OE2
REMARK 470 ASP A1005 CG OD1 OD2
REMARK 470 LYS A1042 CD CE NZ
REMARK 470 LYS A1047 CG CD CE NZ
REMARK 470 LEU A1048 CG CD1 CD2
REMARK 470 GLU A1049 CG CD OE1 OE2
REMARK 470 ASP A1050 CG OD1 OD2
REMARK 470 LYS A1051 CG CD CE NZ
REMARK 470 ASP A1054 CG OD1 OD2
REMARK 470 LYS A1059 CG CD CE NZ
REMARK 470 LEU A1106 CG CD1 CD2
REMARK 470 SER A 443 OG
REMARK 470 LYS A 444 CG CD CE NZ
REMARK 470 GLU A 447 CG CD OE1 OE2
REMARK 470 ARG A 482 CZ NH1 NH2
REMARK 470 THR A 495 OG1 CG2
REMARK 470 GLU A 508 CG CD OE1 OE2
REMARK 470 LYS A 539 CG CD CE NZ
REMARK 470 ARG A 546 CG CD NE CZ NH1 NH2
REMARK 470 ARG A 547 CZ NH1 NH2
REMARK 470 LEU A 552 CG CD1 CD2
REMARK 470 THR A 553 OG1 CG2
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 PRO A 196 30.44 -98.55
REMARK 500 GLU A 208 -112.00 39.81
REMARK 500 ASN A 219 114.07 -25.82
REMARK 500 ASP A 287 112.78 -38.64
REMARK 500 ASN A 309 -5.03 72.76
REMARK 500 ALA A 379 70.01 47.03
REMARK 500 VAL A 404 -61.70 -127.51
REMARK 500 PRO A 513 151.73 -48.46
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 ZN A1202 ZN
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 HIS A 433 NE2
REMARK 620 2 HOH A1311 O 85.0
REMARK 620 3 HOH A1312 O 117.7 114.6
REMARK 620 N 1 2
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE A8T A 1201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1202
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 4O9R RELATED DB: PDB
REMARK 900 HUMAN SMOOTHENED RECEPTOR STRUCTURE IN COMPLEX WITH CYCLOPAMINE
REMARK 900 RELATED ID: GPCR-131 RELATED DB: TARGETTRACK
REMARK 900 RELATED ID: 4QIN RELATED DB: PDB
DBREF 4QIM A 190 433 UNP Q99835 SMO_HUMAN 190 433
DBREF 4QIM A 1001 1106 UNP P0ABE7 C562_ECOLX 23 128
DBREF 4QIM A 441 555 UNP Q99835 SMO_HUMAN 441 555
SEQADV 4QIM GLY A 187 UNP Q99835 EXPRESSION TAG
SEQADV 4QIM GLY A 188 UNP Q99835 EXPRESSION TAG
SEQADV 4QIM THR A 189 UNP Q99835 EXPRESSION TAG
SEQADV 4QIM TRP A 1007 UNP P0ABE7 MET 29 ENGINEERED MUTATION
SEQADV 4QIM ILE A 1102 UNP P0ABE7 HIS 124 ENGINEERED MUTATION
SEQADV 4QIM LEU A 1106 UNP P0ABE7 ARG 128 ENGINEERED MUTATION
SEQRES 1 A 468 GLY GLY THR SER GLY GLN CYS GLU VAL PRO LEU VAL ARG
SEQRES 2 A 468 THR ASP ASN PRO LYS SER TRP TYR GLU ASP VAL GLU GLY
SEQRES 3 A 468 CYS GLY ILE GLN CYS GLN ASN PRO LEU PHE THR GLU ALA
SEQRES 4 A 468 GLU HIS GLN ASP MET HIS SER TYR ILE ALA ALA PHE GLY
SEQRES 5 A 468 ALA VAL THR GLY LEU CYS THR LEU PHE THR LEU ALA THR
SEQRES 6 A 468 PHE VAL ALA ASP TRP ARG ASN SER ASN ARG TYR PRO ALA
SEQRES 7 A 468 VAL ILE LEU PHE TYR VAL ASN ALA CYS PHE PHE VAL GLY
SEQRES 8 A 468 SER ILE GLY TRP LEU ALA GLN PHE MET ASP GLY ALA ARG
SEQRES 9 A 468 ARG GLU ILE VAL CYS ARG ALA ASP GLY THR MET ARG LEU
SEQRES 10 A 468 GLY GLU PRO THR SER ASN GLU THR LEU SER CYS VAL ILE
SEQRES 11 A 468 ILE PHE VAL ILE VAL TYR TYR ALA LEU MET ALA GLY VAL
SEQRES 12 A 468 VAL TRP PHE VAL VAL LEU THR TYR ALA TRP HIS THR SER
SEQRES 13 A 468 PHE LYS ALA LEU GLY THR THR TYR GLN PRO LEU SER GLY
SEQRES 14 A 468 LYS THR SER TYR PHE HIS LEU LEU THR TRP SER LEU PRO
SEQRES 15 A 468 PHE VAL LEU THR VAL ALA ILE LEU ALA VAL ALA GLN VAL
SEQRES 16 A 468 ASP GLY ASP SER VAL SER GLY ILE CYS PHE VAL GLY TYR
SEQRES 17 A 468 LYS ASN TYR ARG TYR ARG ALA GLY PHE VAL LEU ALA PRO
SEQRES 18 A 468 ILE GLY LEU VAL LEU ILE VAL GLY GLY TYR PHE LEU ILE
SEQRES 19 A 468 ARG GLY VAL MET THR LEU PHE SER ILE LYS SER ASN HIS
SEQRES 20 A 468 ALA ASP LEU GLU ASP ASN TRP GLU THR LEU ASN ASP ASN
SEQRES 21 A 468 LEU LYS VAL ILE GLU LYS ALA ASP ASN ALA ALA GLN VAL
SEQRES 22 A 468 LYS ASP ALA LEU THR LYS MET ARG ALA ALA ALA LEU ASP
SEQRES 23 A 468 ALA GLN LYS ALA THR PRO PRO LYS LEU GLU ASP LYS SER
SEQRES 24 A 468 PRO ASP SER PRO GLU MET LYS ASP PHE ARG HIS GLY PHE
SEQRES 25 A 468 ASP ILE LEU VAL GLY GLN ILE ASP ASP ALA LEU LYS LEU
SEQRES 26 A 468 ALA ASN GLU GLY LYS VAL LYS GLU ALA GLN ALA ALA ALA
SEQRES 27 A 468 GLU GLN LEU LYS THR THR ARG ASN ALA TYR ILE GLN LYS
SEQRES 28 A 468 TYR LEU ALA ALA SER LYS ILE ASN GLU THR MET LEU ARG
SEQRES 29 A 468 LEU GLY ILE PHE GLY PHE LEU ALA PHE GLY PHE VAL LEU
SEQRES 30 A 468 ILE THR PHE SER CYS HIS PHE TYR ASP PHE PHE ASN GLN
SEQRES 31 A 468 ALA GLU TRP GLU ARG SER PHE ARG ASP TYR VAL LEU CYS
SEQRES 32 A 468 GLN ALA ASN VAL THR ILE GLY LEU PRO THR LYS GLN PRO
SEQRES 33 A 468 ILE PRO ASP CYS GLU ILE LYS ASN ARG PRO SER LEU LEU
SEQRES 34 A 468 VAL GLU LYS ILE ASN LEU PHE ALA MET PHE GLY THR GLY
SEQRES 35 A 468 ILE ALA MET SER THR TRP VAL TRP THR LYS ALA THR LEU
SEQRES 36 A 468 LEU ILE TRP ARG ARG THR TRP CYS ARG LEU THR GLY GLN
HET A8T A1201 33
HET ZN A1202 1
HETNAM A8T 2-{6-[4-(4-BENZYLPHTHALAZIN-1-YL)PIPERAZIN-1-
HETNAM 2 A8T YL]PYRIDIN-3-YL}PROPAN-2-OL
HETNAM ZN ZINC ION
FORMUL 2 A8T C27 H29 N5 O
FORMUL 3 ZN ZN 2+
FORMUL 4 HOH *23(H2 O)
HELIX 1 1 ASN A 202 TRP A 206 5 5
HELIX 2 2 THR A 223 ASP A 255 1 33
HELIX 3 3 ASP A 255 ASN A 260 1 6
HELIX 4 4 VAL A 265 ALA A 283 1 19
HELIX 5 5 GLN A 284 MET A 286 5 3
HELIX 6 6 GLY A 288 CYS A 295 1 8
HELIX 7 7 LEU A 312 SER A 342 1 31
HELIX 8 8 PHE A 343 ALA A 345 5 3
HELIX 9 9 LYS A 356 ALA A 379 1 24
HELIX 10 10 ASN A 396 VAL A 404 1 9
HELIX 11 11 VAL A 404 LYS A 1019 1 49
HELIX 12 12 ASN A 1022 ALA A 1043 1 22
HELIX 13 13 PRO A 1045 GLU A 1049 5 5
HELIX 14 14 SER A 1055 GLY A 1082 1 28
HELIX 15 15 VAL A 1084 ILE A 1102 1 19
HELIX 16 16 ILE A 1102 ALA A 442 1 7
HELIX 17 17 ASN A 446 ALA A 492 1 47
HELIX 18 18 SER A 514 THR A 534 1 21
HELIX 19 19 TRP A 535 TRP A 537 5 3
HELIX 20 20 THR A 538 THR A 553 1 16
SHEET 1 A 2 LEU A 197 ARG A 199 0
SHEET 2 A 2 CYS A 213 ILE A 215 -1 O GLY A 214 N VAL A 198
SHEET 1 B 2 VAL A 381 ASP A 384 0
SHEET 2 B 2 ILE A 389 VAL A 392 -1 O PHE A 391 N ASP A 382
SSBOND 1 CYS A 193 CYS A 213 1555 1555 2.03
SSBOND 2 CYS A 217 CYS A 295 1555 1555 2.03
SSBOND 3 CYS A 314 CYS A 390 1555 1555 2.04
SSBOND 4 CYS A 490 CYS A 507 1555 1555 2.05
LINK NE2 HIS A 433 ZN ZN A1202 1555 1555 2.09
LINK ZN ZN A1202 O HOH A1311 1555 1555 2.22
LINK ZN ZN A1202 O HOH A1312 1555 1555 2.23
CISPEP 1 VAL A 195 PRO A 196 0 10.66
CISPEP 2 TYR A 262 PRO A 263 0 5.04
CISPEP 3 GLU A 305 PRO A 306 0 3.76
SITE 1 AC1 14 ASN A 219 LEU A 221 TRP A 281 ASP A 384
SITE 2 AC1 14 VAL A 386 PHE A 391 TYR A 394 LYS A 395
SITE 3 AC1 14 ARG A 400 HIS A 470 ASP A 473 GLN A 477
SITE 4 AC1 14 GLU A 518 ASN A 521
SITE 1 AC2 4 HIS A 433 ASP A1021 HOH A1311 HOH A1312
CRYST1 42.830 79.840 170.070 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.023348 0.000000 0.000000 0.00000
SCALE2 0.000000 0.012525 0.000000 0.00000
SCALE3 0.000000 0.000000 0.005880 0.00000