data_4QK4 # _entry.id 4QK4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QK4 pdb_00004qk4 10.2210/pdb4qk4/pdb RCSB RCSB086155 ? ? WWPDB D_1000086155 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-30 2 'Structure model' 1 1 2015-02-04 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2018-03-07 5 'Structure model' 1 4 2023-02-01 6 'Structure model' 1 5 2023-09-20 7 'Structure model' 1 6 2024-03-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Refinement description' 8 7 'Structure model' 'Source and taxonomy' 9 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' diffrn_source 3 5 'Structure model' database_2 4 5 'Structure model' struct_ref_seq_dif 5 5 'Structure model' struct_site 6 6 'Structure model' chem_comp_atom 7 6 'Structure model' chem_comp_bond 8 6 'Structure model' pdbx_initial_refinement_model 9 7 'Structure model' entity 10 7 'Structure model' pdbx_entity_src_syn # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.name' 3 4 'Structure model' '_diffrn_source.source' 4 5 'Structure model' '_database_2.pdbx_DOI' 5 5 'Structure model' '_database_2.pdbx_database_accession' 6 5 'Structure model' '_struct_ref_seq_dif.details' 7 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 8 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 9 5 'Structure model' '_struct_site.pdbx_auth_seq_id' 10 7 'Structure model' '_entity.details' # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4QK4 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-06-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type TargetTrack JCSG-429246 . unspecified TargetTrack JCSG-429245 . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joint Center for Structural Genomics (JCSG)' 1 'Partnership for Stem Cell Biology (STEMCELL)' 2 # _citation.id primary _citation.title 'The signaling phospholipid PIP3 creates a new interaction surface on the nuclear receptor SF-1.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 111 _citation.page_first 15054 _citation.page_last 15059 _citation.year 2014 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25288771 _citation.pdbx_database_id_DOI 10.1073/pnas.1416740111 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Blind, R.D.' 1 ? primary 'Sablin, E.P.' 2 ? primary 'Kuchenbecker, K.M.' 3 ? primary 'Chiu, H.J.' 4 ? primary 'Deacon, A.M.' 5 ? primary 'Das, D.' 6 ? primary 'Fletterick, R.J.' 7 ? primary 'Ingraham, H.A.' 8 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Steroidogenic factor 1' 27903.406 1 ? 'C247S, C412S' 'UNP residues 218-461' ? 2 polymer syn 'Peroxisome proliferator-activated receptor gamma coactivator 1-alpha' 1523.854 1 ? ? 'UNP residues 139-152' ? 3 non-polymer syn ;(2S)-3-{[(R)-hydroxy{[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dihexadecanoate ; 970.992 1 ? ? ? 'SMILES string: CCCCCCCCCCCCCCCC(=O)OCC(CO[P](O)(=O)OC1C(O)C(O)C (O[P](O)(O)=O)C(O[P](O)(O)=O)C1O)OC(=O)CCCCCCCCCCCCCCC' 4 non-polymer syn 1,2-ETHANEDIOL 62.068 5 ? ? ? ? 5 water nat water 18.015 55 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 ;SF-1, STF-1, Adrenal 4-binding protein, Fushi tarazu factor homolog 1, Nuclear receptor subfamily 5 group A member 1, Steroid hormone receptor Ad4BP ; 2 'PGC-1-alpha, PPAR-gamma coactivator 1-alpha, PPARGC-1-alpha, Ligand effect modulator 6' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSGGPNVPELILQLLQLEPDEDQVRARILGSLQEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMT LLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIIL FSLDLKFLNNHILVKDAQEKANAALLDYTLCHYPHSGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEML QAKQT ; ;GSGGPNVPELILQLLQLEPDEDQVRARILGSLQEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMT LLQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIIL FSLDLKFLNNHILVKDAQEKANAALLDYTLCHYPHSGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEML QAKQT ; A JCSG-429246 2 'polypeptide(L)' no no EEPSLLKKLLLAPA EEPSLLKKLLLAPA B JCSG-429245 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 ;(2S)-3-{[(R)-hydroxy{[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dihexadecanoate ; PIK 4 1,2-ETHANEDIOL EDO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 GLY n 1 4 GLY n 1 5 PRO n 1 6 ASN n 1 7 VAL n 1 8 PRO n 1 9 GLU n 1 10 LEU n 1 11 ILE n 1 12 LEU n 1 13 GLN n 1 14 LEU n 1 15 LEU n 1 16 GLN n 1 17 LEU n 1 18 GLU n 1 19 PRO n 1 20 ASP n 1 21 GLU n 1 22 ASP n 1 23 GLN n 1 24 VAL n 1 25 ARG n 1 26 ALA n 1 27 ARG n 1 28 ILE n 1 29 LEU n 1 30 GLY n 1 31 SER n 1 32 LEU n 1 33 GLN n 1 34 GLU n 1 35 PRO n 1 36 THR n 1 37 LYS n 1 38 SER n 1 39 ARG n 1 40 PRO n 1 41 ASP n 1 42 GLN n 1 43 PRO n 1 44 ALA n 1 45 ALA n 1 46 PHE n 1 47 GLY n 1 48 LEU n 1 49 LEU n 1 50 CYS n 1 51 ARG n 1 52 MET n 1 53 ALA n 1 54 ASP n 1 55 GLN n 1 56 THR n 1 57 PHE n 1 58 ILE n 1 59 SER n 1 60 ILE n 1 61 VAL n 1 62 ASP n 1 63 TRP n 1 64 ALA n 1 65 ARG n 1 66 ARG n 1 67 CYS n 1 68 MET n 1 69 VAL n 1 70 PHE n 1 71 LYS n 1 72 GLU n 1 73 LEU n 1 74 GLU n 1 75 VAL n 1 76 ALA n 1 77 ASP n 1 78 GLN n 1 79 MET n 1 80 THR n 1 81 LEU n 1 82 LEU n 1 83 GLN n 1 84 ASN n 1 85 CYS n 1 86 TRP n 1 87 SER n 1 88 GLU n 1 89 LEU n 1 90 LEU n 1 91 VAL n 1 92 PHE n 1 93 ASP n 1 94 HIS n 1 95 ILE n 1 96 TYR n 1 97 ARG n 1 98 GLN n 1 99 VAL n 1 100 GLN n 1 101 HIS n 1 102 GLY n 1 103 LYS n 1 104 GLU n 1 105 GLY n 1 106 SER n 1 107 ILE n 1 108 LEU n 1 109 LEU n 1 110 VAL n 1 111 THR n 1 112 GLY n 1 113 GLN n 1 114 GLU n 1 115 VAL n 1 116 GLU n 1 117 LEU n 1 118 THR n 1 119 THR n 1 120 VAL n 1 121 ALA n 1 122 THR n 1 123 GLN n 1 124 ALA n 1 125 GLY n 1 126 SER n 1 127 LEU n 1 128 LEU n 1 129 HIS n 1 130 SER n 1 131 LEU n 1 132 VAL n 1 133 LEU n 1 134 ARG n 1 135 ALA n 1 136 GLN n 1 137 GLU n 1 138 LEU n 1 139 VAL n 1 140 LEU n 1 141 GLN n 1 142 LEU n 1 143 LEU n 1 144 ALA n 1 145 LEU n 1 146 GLN n 1 147 LEU n 1 148 ASP n 1 149 ARG n 1 150 GLN n 1 151 GLU n 1 152 PHE n 1 153 VAL n 1 154 CYS n 1 155 LEU n 1 156 LYS n 1 157 PHE n 1 158 ILE n 1 159 ILE n 1 160 LEU n 1 161 PHE n 1 162 SER n 1 163 LEU n 1 164 ASP n 1 165 LEU n 1 166 LYS n 1 167 PHE n 1 168 LEU n 1 169 ASN n 1 170 ASN n 1 171 HIS n 1 172 ILE n 1 173 LEU n 1 174 VAL n 1 175 LYS n 1 176 ASP n 1 177 ALA n 1 178 GLN n 1 179 GLU n 1 180 LYS n 1 181 ALA n 1 182 ASN n 1 183 ALA n 1 184 ALA n 1 185 LEU n 1 186 LEU n 1 187 ASP n 1 188 TYR n 1 189 THR n 1 190 LEU n 1 191 CYS n 1 192 HIS n 1 193 TYR n 1 194 PRO n 1 195 HIS n 1 196 SER n 1 197 GLY n 1 198 ASP n 1 199 LYS n 1 200 PHE n 1 201 GLN n 1 202 GLN n 1 203 LEU n 1 204 LEU n 1 205 LEU n 1 206 CYS n 1 207 LEU n 1 208 VAL n 1 209 GLU n 1 210 VAL n 1 211 ARG n 1 212 ALA n 1 213 LEU n 1 214 SER n 1 215 MET n 1 216 GLN n 1 217 ALA n 1 218 LYS n 1 219 GLU n 1 220 TYR n 1 221 LEU n 1 222 TYR n 1 223 HIS n 1 224 LYS n 1 225 HIS n 1 226 LEU n 1 227 GLY n 1 228 ASN n 1 229 GLU n 1 230 MET n 1 231 PRO n 1 232 ARG n 1 233 ASN n 1 234 ASN n 1 235 LEU n 1 236 LEU n 1 237 ILE n 1 238 GLU n 1 239 MET n 1 240 LEU n 1 241 GLN n 1 242 ALA n 1 243 LYS n 1 244 GLN n 1 245 THR n 2 1 GLU n 2 2 GLU n 2 3 PRO n 2 4 SER n 2 5 LEU n 2 6 LEU n 2 7 LYS n 2 8 LYS n 2 9 LEU n 2 10 LEU n 2 11 LEU n 2 12 ALA n 2 13 PRO n 2 14 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'AD4BP, FTZF1, NR5A1, RC2003B, SF1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pBH4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details ;PGC-1ALPHA (PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA CO-ACTIVATOR-1ALPHA) PEPTIDE CONTAINING RESIDUES 139-EEPSLLKKLLLAPA-152 ; # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PIK non-polymer . ;(2S)-3-{[(R)-hydroxy{[(1R,2R,3S,4R,5R,6S)-2,3,6-trihydroxy-4,5-bis(phosphonooxy)cyclohexyl]oxy}phosphoryl]oxy}propane-1,2-diyl dihexadecanoate ; 'PI(4,5)P2 dipalmitoyl (16:0,16:0)' 'C41 H81 O19 P3' 970.992 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 SER 2 218 218 SER SER A . n A 1 3 GLY 3 219 219 GLY GLY A . n A 1 4 GLY 4 220 220 GLY GLY A . n A 1 5 PRO 5 221 221 PRO PRO A . n A 1 6 ASN 6 222 222 ASN ASN A . n A 1 7 VAL 7 223 223 VAL VAL A . n A 1 8 PRO 8 224 224 PRO PRO A . n A 1 9 GLU 9 225 225 GLU GLU A . n A 1 10 LEU 10 226 226 LEU LEU A . n A 1 11 ILE 11 227 227 ILE ILE A . n A 1 12 LEU 12 228 228 LEU LEU A . n A 1 13 GLN 13 229 229 GLN GLN A . n A 1 14 LEU 14 230 230 LEU LEU A . n A 1 15 LEU 15 231 231 LEU LEU A . n A 1 16 GLN 16 232 232 GLN GLN A . n A 1 17 LEU 17 233 233 LEU LEU A . n A 1 18 GLU 18 234 234 GLU GLU A . n A 1 19 PRO 19 235 235 PRO PRO A . n A 1 20 ASP 20 236 236 ASP ASP A . n A 1 21 GLU 21 237 237 GLU GLU A . n A 1 22 ASP 22 238 238 ASP ASP A . n A 1 23 GLN 23 239 239 GLN GLN A . n A 1 24 VAL 24 240 240 VAL VAL A . n A 1 25 ARG 25 241 241 ARG ARG A . n A 1 26 ALA 26 242 242 ALA ALA A . n A 1 27 ARG 27 243 243 ARG ARG A . n A 1 28 ILE 28 244 244 ILE ILE A . n A 1 29 LEU 29 245 245 LEU LEU A . n A 1 30 GLY 30 246 246 GLY GLY A . n A 1 31 SER 31 247 247 SER SER A . n A 1 32 LEU 32 248 248 LEU LEU A . n A 1 33 GLN 33 249 249 GLN GLN A . n A 1 34 GLU 34 250 250 GLU GLU A . n A 1 35 PRO 35 251 251 PRO PRO A . n A 1 36 THR 36 252 252 THR THR A . n A 1 37 LYS 37 253 253 LYS LYS A . n A 1 38 SER 38 254 254 SER SER A . n A 1 39 ARG 39 255 255 ARG ARG A . n A 1 40 PRO 40 256 256 PRO PRO A . n A 1 41 ASP 41 257 257 ASP ASP A . n A 1 42 GLN 42 258 258 GLN GLN A . n A 1 43 PRO 43 259 259 PRO PRO A . n A 1 44 ALA 44 260 260 ALA ALA A . n A 1 45 ALA 45 261 261 ALA ALA A . n A 1 46 PHE 46 262 262 PHE PHE A . n A 1 47 GLY 47 263 263 GLY GLY A . n A 1 48 LEU 48 264 264 LEU LEU A . n A 1 49 LEU 49 265 265 LEU LEU A . n A 1 50 CYS 50 266 266 CYS CYS A . n A 1 51 ARG 51 267 267 ARG ARG A . n A 1 52 MET 52 268 268 MET MET A . n A 1 53 ALA 53 269 269 ALA ALA A . n A 1 54 ASP 54 270 270 ASP ASP A . n A 1 55 GLN 55 271 271 GLN GLN A . n A 1 56 THR 56 272 272 THR THR A . n A 1 57 PHE 57 273 273 PHE PHE A . n A 1 58 ILE 58 274 274 ILE ILE A . n A 1 59 SER 59 275 275 SER SER A . n A 1 60 ILE 60 276 276 ILE ILE A . n A 1 61 VAL 61 277 277 VAL VAL A . n A 1 62 ASP 62 278 278 ASP ASP A . n A 1 63 TRP 63 279 279 TRP TRP A . n A 1 64 ALA 64 280 280 ALA ALA A . n A 1 65 ARG 65 281 281 ARG ARG A . n A 1 66 ARG 66 282 282 ARG ARG A . n A 1 67 CYS 67 283 283 CYS CYS A . n A 1 68 MET 68 284 284 MET MET A . n A 1 69 VAL 69 285 285 VAL VAL A . n A 1 70 PHE 70 286 286 PHE PHE A . n A 1 71 LYS 71 287 287 LYS LYS A . n A 1 72 GLU 72 288 288 GLU GLU A . n A 1 73 LEU 73 289 289 LEU LEU A . n A 1 74 GLU 74 290 290 GLU GLU A . n A 1 75 VAL 75 291 291 VAL VAL A . n A 1 76 ALA 76 292 292 ALA ALA A . n A 1 77 ASP 77 293 293 ASP ASP A . n A 1 78 GLN 78 294 294 GLN GLN A . n A 1 79 MET 79 295 295 MET MET A . n A 1 80 THR 80 296 296 THR THR A . n A 1 81 LEU 81 297 297 LEU LEU A . n A 1 82 LEU 82 298 298 LEU LEU A . n A 1 83 GLN 83 299 299 GLN GLN A . n A 1 84 ASN 84 300 300 ASN ASN A . n A 1 85 CYS 85 301 301 CYS CYS A . n A 1 86 TRP 86 302 302 TRP TRP A . n A 1 87 SER 87 303 303 SER SER A . n A 1 88 GLU 88 304 304 GLU GLU A . n A 1 89 LEU 89 305 305 LEU LEU A . n A 1 90 LEU 90 306 306 LEU LEU A . n A 1 91 VAL 91 307 307 VAL VAL A . n A 1 92 PHE 92 308 308 PHE PHE A . n A 1 93 ASP 93 309 309 ASP ASP A . n A 1 94 HIS 94 310 310 HIS HIS A . n A 1 95 ILE 95 311 311 ILE ILE A . n A 1 96 TYR 96 312 312 TYR TYR A . n A 1 97 ARG 97 313 313 ARG ARG A . n A 1 98 GLN 98 314 314 GLN GLN A . n A 1 99 VAL 99 315 315 VAL VAL A . n A 1 100 GLN 100 316 316 GLN GLN A . n A 1 101 HIS 101 317 317 HIS HIS A . n A 1 102 GLY 102 318 318 GLY GLY A . n A 1 103 LYS 103 319 319 LYS LYS A . n A 1 104 GLU 104 320 320 GLU GLU A . n A 1 105 GLY 105 321 321 GLY GLY A . n A 1 106 SER 106 322 322 SER SER A . n A 1 107 ILE 107 323 323 ILE ILE A . n A 1 108 LEU 108 324 324 LEU LEU A . n A 1 109 LEU 109 325 325 LEU LEU A . n A 1 110 VAL 110 326 326 VAL VAL A . n A 1 111 THR 111 327 327 THR THR A . n A 1 112 GLY 112 328 328 GLY GLY A . n A 1 113 GLN 113 329 329 GLN GLN A . n A 1 114 GLU 114 330 330 GLU GLU A . n A 1 115 VAL 115 331 331 VAL VAL A . n A 1 116 GLU 116 332 332 GLU GLU A . n A 1 117 LEU 117 333 333 LEU LEU A . n A 1 118 THR 118 334 334 THR THR A . n A 1 119 THR 119 335 335 THR THR A . n A 1 120 VAL 120 336 336 VAL VAL A . n A 1 121 ALA 121 337 337 ALA ALA A . n A 1 122 THR 122 338 338 THR THR A . n A 1 123 GLN 123 339 339 GLN GLN A . n A 1 124 ALA 124 340 340 ALA ALA A . n A 1 125 GLY 125 341 341 GLY GLY A . n A 1 126 SER 126 342 342 SER SER A . n A 1 127 LEU 127 343 343 LEU LEU A . n A 1 128 LEU 128 344 344 LEU LEU A . n A 1 129 HIS 129 345 345 HIS HIS A . n A 1 130 SER 130 346 346 SER SER A . n A 1 131 LEU 131 347 347 LEU LEU A . n A 1 132 VAL 132 348 348 VAL VAL A . n A 1 133 LEU 133 349 349 LEU LEU A . n A 1 134 ARG 134 350 350 ARG ARG A . n A 1 135 ALA 135 351 351 ALA ALA A . n A 1 136 GLN 136 352 352 GLN GLN A . n A 1 137 GLU 137 353 353 GLU GLU A . n A 1 138 LEU 138 354 354 LEU LEU A . n A 1 139 VAL 139 355 355 VAL VAL A . n A 1 140 LEU 140 356 356 LEU LEU A . n A 1 141 GLN 141 357 357 GLN GLN A . n A 1 142 LEU 142 358 358 LEU LEU A . n A 1 143 LEU 143 359 359 LEU LEU A . n A 1 144 ALA 144 360 360 ALA ALA A . n A 1 145 LEU 145 361 361 LEU LEU A . n A 1 146 GLN 146 362 362 GLN GLN A . n A 1 147 LEU 147 363 363 LEU LEU A . n A 1 148 ASP 148 364 364 ASP ASP A . n A 1 149 ARG 149 365 365 ARG ARG A . n A 1 150 GLN 150 366 366 GLN GLN A . n A 1 151 GLU 151 367 367 GLU GLU A . n A 1 152 PHE 152 368 368 PHE PHE A . n A 1 153 VAL 153 369 369 VAL VAL A . n A 1 154 CYS 154 370 370 CYS CYS A . n A 1 155 LEU 155 371 371 LEU LEU A . n A 1 156 LYS 156 372 372 LYS LYS A . n A 1 157 PHE 157 373 373 PHE PHE A . n A 1 158 ILE 158 374 374 ILE ILE A . n A 1 159 ILE 159 375 375 ILE ILE A . n A 1 160 LEU 160 376 376 LEU LEU A . n A 1 161 PHE 161 377 377 PHE PHE A . n A 1 162 SER 162 378 378 SER SER A . n A 1 163 LEU 163 379 379 LEU LEU A . n A 1 164 ASP 164 380 380 ASP ASP A . n A 1 165 LEU 165 381 381 LEU LEU A . n A 1 166 LYS 166 382 382 LYS LYS A . n A 1 167 PHE 167 383 383 PHE PHE A . n A 1 168 LEU 168 384 384 LEU LEU A . n A 1 169 ASN 169 385 385 ASN ASN A . n A 1 170 ASN 170 386 386 ASN ASN A . n A 1 171 HIS 171 387 387 HIS HIS A . n A 1 172 ILE 172 388 388 ILE ILE A . n A 1 173 LEU 173 389 389 LEU LEU A . n A 1 174 VAL 174 390 390 VAL VAL A . n A 1 175 LYS 175 391 391 LYS LYS A . n A 1 176 ASP 176 392 392 ASP ASP A . n A 1 177 ALA 177 393 393 ALA ALA A . n A 1 178 GLN 178 394 394 GLN GLN A . n A 1 179 GLU 179 395 395 GLU GLU A . n A 1 180 LYS 180 396 396 LYS LYS A . n A 1 181 ALA 181 397 397 ALA ALA A . n A 1 182 ASN 182 398 398 ASN ASN A . n A 1 183 ALA 183 399 399 ALA ALA A . n A 1 184 ALA 184 400 400 ALA ALA A . n A 1 185 LEU 185 401 401 LEU LEU A . n A 1 186 LEU 186 402 402 LEU LEU A . n A 1 187 ASP 187 403 403 ASP ASP A . n A 1 188 TYR 188 404 404 TYR TYR A . n A 1 189 THR 189 405 405 THR THR A . n A 1 190 LEU 190 406 406 LEU LEU A . n A 1 191 CYS 191 407 407 CYS CYS A . n A 1 192 HIS 192 408 408 HIS HIS A . n A 1 193 TYR 193 409 409 TYR TYR A . n A 1 194 PRO 194 410 410 PRO PRO A . n A 1 195 HIS 195 411 411 HIS HIS A . n A 1 196 SER 196 412 412 SER SER A . n A 1 197 GLY 197 413 413 GLY GLY A . n A 1 198 ASP 198 414 414 ASP ASP A . n A 1 199 LYS 199 415 415 LYS LYS A . n A 1 200 PHE 200 416 416 PHE PHE A . n A 1 201 GLN 201 417 417 GLN GLN A . n A 1 202 GLN 202 418 418 GLN GLN A . n A 1 203 LEU 203 419 419 LEU LEU A . n A 1 204 LEU 204 420 420 LEU LEU A . n A 1 205 LEU 205 421 421 LEU LEU A . n A 1 206 CYS 206 422 422 CYS CYS A . n A 1 207 LEU 207 423 423 LEU LEU A . n A 1 208 VAL 208 424 424 VAL VAL A . n A 1 209 GLU 209 425 425 GLU GLU A . n A 1 210 VAL 210 426 426 VAL VAL A . n A 1 211 ARG 211 427 427 ARG ARG A . n A 1 212 ALA 212 428 428 ALA ALA A . n A 1 213 LEU 213 429 429 LEU LEU A . n A 1 214 SER 214 430 430 SER SER A . n A 1 215 MET 215 431 431 MET MET A . n A 1 216 GLN 216 432 432 GLN GLN A . n A 1 217 ALA 217 433 433 ALA ALA A . n A 1 218 LYS 218 434 434 LYS LYS A . n A 1 219 GLU 219 435 435 GLU GLU A . n A 1 220 TYR 220 436 436 TYR TYR A . n A 1 221 LEU 221 437 437 LEU LEU A . n A 1 222 TYR 222 438 438 TYR TYR A . n A 1 223 HIS 223 439 439 HIS HIS A . n A 1 224 LYS 224 440 440 LYS LYS A . n A 1 225 HIS 225 441 441 HIS HIS A . n A 1 226 LEU 226 442 442 LEU LEU A . n A 1 227 GLY 227 443 443 GLY GLY A . n A 1 228 ASN 228 444 444 ASN ASN A . n A 1 229 GLU 229 445 445 GLU GLU A . n A 1 230 MET 230 446 446 MET MET A . n A 1 231 PRO 231 447 447 PRO PRO A . n A 1 232 ARG 232 448 448 ARG ARG A . n A 1 233 ASN 233 449 449 ASN ASN A . n A 1 234 ASN 234 450 450 ASN ASN A . n A 1 235 LEU 235 451 451 LEU LEU A . n A 1 236 LEU 236 452 452 LEU LEU A . n A 1 237 ILE 237 453 453 ILE ILE A . n A 1 238 GLU 238 454 454 GLU GLU A . n A 1 239 MET 239 455 455 MET MET A . n A 1 240 LEU 240 456 456 LEU LEU A . n A 1 241 GLN 241 457 457 GLN GLN A . n A 1 242 ALA 242 458 458 ALA ALA A . n A 1 243 LYS 243 459 459 LYS LYS A . n A 1 244 GLN 244 460 460 GLN GLN A . n A 1 245 THR 245 461 461 THR THR A . n B 2 1 GLU 1 139 ? ? ? B . n B 2 2 GLU 2 140 ? ? ? B . n B 2 3 PRO 3 141 141 PRO PRO B . n B 2 4 SER 4 142 142 SER SER B . n B 2 5 LEU 5 143 143 LEU LEU B . n B 2 6 LEU 6 144 144 LEU LEU B . n B 2 7 LYS 7 145 145 LYS LYS B . n B 2 8 LYS 8 146 146 LYS LYS B . n B 2 9 LEU 9 147 147 LEU LEU B . n B 2 10 LEU 10 148 148 LEU LEU B . n B 2 11 LEU 11 149 149 LEU LEU B . n B 2 12 ALA 12 150 150 ALA ALA B . n B 2 13 PRO 13 151 151 PRO PRO B . n B 2 14 ALA 14 152 152 ALA ALA B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PIK 1 501 1 PIK PIJ A . D 4 EDO 1 502 501 EDO EDO A . E 4 EDO 1 503 502 EDO EDO A . F 4 EDO 1 504 503 EDO EDO A . G 4 EDO 1 505 504 EDO EDO A . H 4 EDO 1 506 505 EDO EDO A . I 5 HOH 1 601 506 HOH HOH A . I 5 HOH 2 602 507 HOH HOH A . I 5 HOH 3 603 508 HOH HOH A . I 5 HOH 4 604 509 HOH HOH A . I 5 HOH 5 605 510 HOH HOH A . I 5 HOH 6 606 511 HOH HOH A . I 5 HOH 7 607 512 HOH HOH A . I 5 HOH 8 608 513 HOH HOH A . I 5 HOH 9 609 514 HOH HOH A . I 5 HOH 10 610 515 HOH HOH A . I 5 HOH 11 611 516 HOH HOH A . I 5 HOH 12 612 517 HOH HOH A . I 5 HOH 13 613 518 HOH HOH A . I 5 HOH 14 614 519 HOH HOH A . I 5 HOH 15 615 520 HOH HOH A . I 5 HOH 16 616 521 HOH HOH A . I 5 HOH 17 617 522 HOH HOH A . I 5 HOH 18 618 523 HOH HOH A . I 5 HOH 19 619 524 HOH HOH A . I 5 HOH 20 620 525 HOH HOH A . I 5 HOH 21 621 526 HOH HOH A . I 5 HOH 22 622 527 HOH HOH A . I 5 HOH 23 623 528 HOH HOH A . I 5 HOH 24 624 529 HOH HOH A . I 5 HOH 25 625 530 HOH HOH A . I 5 HOH 26 626 531 HOH HOH A . I 5 HOH 27 627 532 HOH HOH A . I 5 HOH 28 628 533 HOH HOH A . I 5 HOH 29 629 534 HOH HOH A . I 5 HOH 30 630 535 HOH HOH A . I 5 HOH 31 631 536 HOH HOH A . I 5 HOH 32 632 537 HOH HOH A . I 5 HOH 33 633 538 HOH HOH A . I 5 HOH 34 634 539 HOH HOH A . I 5 HOH 35 635 540 HOH HOH A . I 5 HOH 36 636 541 HOH HOH A . I 5 HOH 37 637 542 HOH HOH A . I 5 HOH 38 638 543 HOH HOH A . I 5 HOH 39 639 544 HOH HOH A . I 5 HOH 40 640 545 HOH HOH A . I 5 HOH 41 641 546 HOH HOH A . I 5 HOH 42 642 547 HOH HOH A . I 5 HOH 43 643 548 HOH HOH A . I 5 HOH 44 644 549 HOH HOH A . I 5 HOH 45 645 550 HOH HOH A . I 5 HOH 46 646 551 HOH HOH A . I 5 HOH 47 647 552 HOH HOH A . I 5 HOH 48 648 553 HOH HOH A . I 5 HOH 49 649 554 HOH HOH A . I 5 HOH 50 650 555 HOH HOH A . I 5 HOH 51 651 556 HOH HOH A . I 5 HOH 52 652 557 HOH HOH A . I 5 HOH 53 653 558 HOH HOH A . I 5 HOH 54 654 559 HOH HOH A . I 5 HOH 55 655 560 HOH HOH A . # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 PHASER 2.3.0 ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 5 PHENIX 1.8.2 ? package 'P.D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 6 XDS . ? ? ? ? 'data reduction' ? ? ? # _cell.entry_id 4QK4 _cell.length_a 75.000 _cell.length_b 75.000 _cell.length_c 138.630 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QK4 _symmetry.Int_Tables_number 92 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4QK4 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.31 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 62.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.pdbx_details ;SF-1, 6% PEG 8000, 0.2M MGOAC, 20% ETHYLENE GLYCOL, 0.067MM PIP2, 0.80MM 14-MER EEPSLLKKLLLAPA, NANODROP, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.pH ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details MIRROR _diffrn_detector.type 'MARMOSAIC 325 mm CCD' _diffrn_detector.pdbx_collection_date 2013-09-16 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.type 'RIGAKU MICROMAX-002+' _diffrn_source.pdbx_wavelength 1.5418 _diffrn_source.pdbx_wavelength_list ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 2.81 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 23.720 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4QK4 _reflns.B_iso_Wilson_estimate 90.290 _reflns.percent_possible_obs 99.400 _reflns.pdbx_Rsym_value ? _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all ? _reflns.d_resolution_low 29.119 _reflns.pdbx_redundancy ? _reflns.number_obs 10167 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1,2 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.810 2.910 9279 ? 1825 0.656 2.8 ? ? ? ? ? 99.800 1 1,2 2.910 3.030 9715 ? 1906 0.456 3.9 ? ? ? ? ? 99.700 2 1,2 3.030 3.160 8816 ? 1726 0.281 6.3 ? ? ? ? ? 99.700 3 1,2 3.160 3.330 9608 ? 1877 0.165 10.2 ? ? ? ? ? 99.700 4 1,2 3.330 3.540 9422 ? 1842 0.103 15.4 ? ? ? ? ? 99.500 5 1,2 3.540 3.810 9258 ? 1830 0.065 23.3 ? ? ? ? ? 99.400 6 1,2 3.810 4.190 9123 ? 1813 0.045 32.2 ? ? ? ? ? 99.600 7 1,2 4.190 4.790 9363 ? 1835 0.034 40.4 ? ? ? ? ? 99.600 8 1,2 4.790 6.000 9504 ? 1824 0.029 45.7 ? ? ? ? ? 99.500 9 1,2 6.000 ? 9829 ? 1869 0.019 56.4 ? ? ? ? ? 97.300 10 1,2 # _refine.ls_percent_reflns_R_free 4.9900 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_R_Free_selection_details ? _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4QK4 _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.4300 _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values ML _refine.aniso_B[3][3] ? _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.2017 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model 'PDB entry 1YOW' _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.solvent_model_param_ksol ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 506 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 2.000 _refine.ls_percent_reflns_obs 99.5700 _refine.ls_R_factor_R_work 0.1997 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.8100 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min 31.060 _refine.occupancy_min 0.320 _refine.B_iso_mean 73.8761 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] ? _refine.B_iso_max 180.410 _refine.ls_d_res_low 29.119 _refine.pdbx_overall_phase_error 28.1400 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.2408 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 10138 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ;1. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 2. 1,2-ETHANEDIOL (EDO) FROM THE CRYSTALLIZATION SOLUTION HAS BEEN MODELED IN THE SOLVENT STRUCTURE. 3. PIP2 WAS CO-CRYSTALLIZED WITH THE SF-1 PROTEIN AND PGC-1ALPHA PEPTIDE. ; _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1,2 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2041 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 83 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 2179 _refine_hist.d_res_high 2.8100 _refine_hist.d_res_low 29.119 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 2183 0.002 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2947 0.540 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 344 0.036 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 366 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 895 19.460 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.8101 3.0924 4 100.0000 2345 . 0.2715 0.3931 . 123 . 2468 . . 'X-RAY DIFFRACTION' 3.0924 3.5387 4 100.0000 2366 . 0.2353 0.3157 . 125 . 2491 . . 'X-RAY DIFFRACTION' 3.5387 4.4542 4 100.0000 2397 . 0.1974 0.2431 . 126 . 2523 . . 'X-RAY DIFFRACTION' 4.4542 24.7671 4 99.0000 2524 . 0.1793 0.1969 . 132 . 2656 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4QK4 _struct.title 'Crystal structure of human nuclear receptor sf-1 (nr5a1) bound to pip2 at 2.8 a resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'TRANSCRIPTION FACTOR/HORMONE' _struct_keywords.text ;NUCLEAR HORMONE RECEPTOR, NR5A1, SF-1 LIGAND BINDING DOMAIN, REGULATORY LIGANDS, TRANSCRIPTION, TRANSCRIPTION REGULATION, STRUCTURAL GENOMICS, JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI-BIOLOGY, PARTNERSHIP FOR STEM CELL BIOLOGY, PIP3, PIP2, NUCLEUS, NUCLEAR PHOSPHATIDYLINOSITOL PHOSPHATES, TRANSCRIPTION FACTOR-HORMONE complex, STEMCELL ; _struct_keywords.entry_id 4QK4 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 4 ? G N N 4 ? H N N 4 ? I N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP STF1_HUMAN Q13285 1 ;SGGPNVPELILQLLQLEPDEDQVRARILGCLQEPTKSRPDQPAAFGLLCRMADQTFISIVDWARRCMVFKELEVADQMTL LQNCWSELLVFDHIYRQVQHGKEGSILLVTGQEVELTTVATQAGSLLHSLVLRAQELVLQLLALQLDRQEFVCLKFIILF SLDLKFLNNHILVKDAQEKANAALLDYTLCHYPHCGDKFQQLLLCLVEVRALSMQAKEYLYHKHLGNEMPRNNLLIEMLQ AKQT ; 218 ? 2 UNP PRGC1_HUMAN Q9UBK2 2 EEPSLLKKLLLAPA 139 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4QK4 A 2 ? 245 ? Q13285 218 ? 461 ? 218 461 2 2 4QK4 B 1 ? 14 ? Q9UBK2 139 ? 152 ? 139 152 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QK4 GLY A 1 ? UNP Q13285 ? ? 'expression tag' 0 1 1 4QK4 SER A 31 ? UNP Q13285 CYS 247 'engineered mutation' 247 2 1 4QK4 SER A 196 ? UNP Q13285 CYS 412 'engineered mutation' 412 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1030 ? 1 MORE -9 ? 1 'SSA (A^2)' 13260 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 8 ? LEU A 17 ? PRO A 224 LEU A 233 1 ? 10 HELX_P HELX_P2 2 ASP A 20 ? GLU A 34 ? ASP A 236 GLU A 250 1 ? 15 HELX_P HELX_P3 3 PRO A 43 ? ARG A 66 ? PRO A 259 ARG A 282 1 ? 24 HELX_P HELX_P4 4 VAL A 69 ? LEU A 73 ? VAL A 285 LEU A 289 5 ? 5 HELX_P HELX_P5 5 GLU A 74 ? HIS A 101 ? GLU A 290 HIS A 317 1 ? 28 HELX_P HELX_P6 6 LEU A 117 ? ALA A 124 ? LEU A 333 ALA A 340 1 ? 8 HELX_P HELX_P7 7 GLY A 125 ? LEU A 145 ? GLY A 341 LEU A 361 1 ? 21 HELX_P HELX_P8 8 ASP A 148 ? PHE A 161 ? ASP A 364 PHE A 377 1 ? 14 HELX_P HELX_P9 9 ASP A 164 ? LEU A 168 ? ASP A 380 LEU A 384 5 ? 5 HELX_P HELX_P10 10 ASN A 170 ? TYR A 193 ? ASN A 386 TYR A 409 1 ? 24 HELX_P HELX_P11 11 ASP A 198 ? GLY A 227 ? ASP A 414 GLY A 443 1 ? 30 HELX_P HELX_P12 12 ASN A 234 ? GLN A 241 ? ASN A 450 GLN A 457 1 ? 8 HELX_P HELX_P13 13 SER B 4 ? LEU B 11 ? SER B 142 LEU B 149 1 ? 8 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 106 ? LEU A 108 ? SER A 322 LEU A 324 A 2 GLU A 114 ? GLU A 116 ? GLU A 330 GLU A 332 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 107 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 323 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 115 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 331 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PIK 501 ? 16 'BINDING SITE FOR RESIDUE PIK A 501' AC2 Software A EDO 502 ? 3 'BINDING SITE FOR RESIDUE EDO A 502' AC3 Software A EDO 503 ? 3 'BINDING SITE FOR RESIDUE EDO A 503' AC4 Software A EDO 504 ? 2 'BINDING SITE FOR RESIDUE EDO A 504' AC5 Software A EDO 505 ? 2 'BINDING SITE FOR RESIDUE EDO A 505' AC6 Software A EDO 506 ? 4 'BINDING SITE FOR RESIDUE EDO A 506' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 PHE A 46 ? PHE A 262 . ? 1_555 ? 2 AC1 16 LEU A 49 ? LEU A 265 . ? 1_555 ? 3 AC1 16 CYS A 50 ? CYS A 266 . ? 1_555 ? 4 AC1 16 SER A 87 ? SER A 303 . ? 1_555 ? 5 AC1 16 LEU A 90 ? LEU A 306 . ? 1_555 ? 6 AC1 16 VAL A 91 ? VAL A 307 . ? 1_555 ? 7 AC1 16 ALA A 124 ? ALA A 340 . ? 1_555 ? 8 AC1 16 GLY A 125 ? GLY A 341 . ? 1_555 ? 9 AC1 16 LEU A 128 ? LEU A 344 . ? 1_555 ? 10 AC1 16 LEU A 131 ? LEU A 347 . ? 1_555 ? 11 AC1 16 LEU A 213 ? LEU A 429 . ? 1_555 ? 12 AC1 16 TYR A 220 ? TYR A 436 . ? 1_555 ? 13 AC1 16 HIS A 223 ? HIS A 439 . ? 1_555 ? 14 AC1 16 LYS A 224 ? LYS A 440 . ? 1_555 ? 15 AC1 16 HOH I . ? HOH A 651 . ? 1_555 ? 16 AC1 16 HOH I . ? HOH A 652 . ? 1_555 ? 17 AC2 3 SER A 59 ? SER A 275 . ? 1_555 ? 18 AC2 3 ASP A 93 ? ASP A 309 . ? 1_555 ? 19 AC2 3 ARG A 97 ? ARG A 313 . ? 1_555 ? 20 AC3 3 GLN A 98 ? GLN A 314 . ? 1_555 ? 21 AC3 3 GLY A 102 ? GLY A 318 . ? 1_555 ? 22 AC3 3 GLN A 136 ? GLN A 352 . ? 1_555 ? 23 AC4 2 LEU A 240 ? LEU A 456 . ? 1_555 ? 24 AC4 2 LEU A 240 ? LEU A 456 . ? 7_465 ? 25 AC5 2 GLN A 141 ? GLN A 357 . ? 1_555 ? 26 AC5 2 CYS A 206 ? CYS A 422 . ? 1_555 ? 27 AC6 4 VAL A 208 ? VAL A 424 . ? 1_555 ? 28 AC6 4 GLU A 209 ? GLU A 425 . ? 1_555 ? 29 AC6 4 ALA A 212 ? ALA A 428 . ? 1_555 ? 30 AC6 4 HOH I . ? HOH A 647 . ? 1_555 ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id VAL _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 285 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi 63.70 _pdbx_validate_torsion.psi -49.00 # loop_ _pdbx_SG_project.project_name _pdbx_SG_project.full_name_of_center _pdbx_SG_project.initial_of_center _pdbx_SG_project.id PSI:Biology 'Joint Center for Structural Genomics' JCSG 1 PSI:Biology 'Partnership for Stem Cell Biology' STEMCELL 2 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -19.8699 28.1049 -3.6273 0.5194 0.4160 0.4029 -0.1629 -0.0340 -0.0857 2.8304 3.1370 2.2074 -1.3020 0.2451 -1.2509 0.0652 -0.0261 -0.0283 0.2173 -0.3101 0.2261 0.0231 0.3523 -0.0104 'X-RAY DIFFRACTION' 2 ? refined -36.0886 18.8358 -8.7622 1.0920 0.9516 1.4315 -0.5508 -0.2387 -0.1787 5.2050 3.6018 6.9410 3.1626 1.6640 -2.0748 0.0379 0.2767 -0.2808 0.5511 -0.5179 0.0484 -0.4142 0.3473 0.0987 'X-RAY DIFFRACTION' 3 ? refined -23.7436 44.2590 -11.6308 0.3680 0.7210 0.3239 -0.0094 -0.0111 0.1063 5.7634 6.8955 5.9489 2.7543 -2.8731 1.2340 -0.1292 0.2509 -0.1139 0.9628 0.9020 0.9970 0.2173 -0.8343 -1.1967 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 218 A 461 'chain A and (resseq 218:461)' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 141 B 152 'chain B and (resseq 141:152)' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 501 A 501 'chain A and (resseq 501:501)' ? ? ? ? ? # _phasing.method MR # _pdbx_entry_details.compound_details ? _pdbx_entry_details.sequence_details ;SF-1 (UNIPROT Q13285, NR5A1_HUMAN, STF1_HUMAN) LIGAND BINDING DOMAIN (LBD) WAS EXPRESSED WITH AN N-TERMINAL PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY AMINO ACID RESIDUES 218-461 OF THE TARGET SEQUENCE. RESIDUES C247 AND C412 IN THIS SF-1 CONSTRUCT WERE MUTATED TO S247 AND S412. PEPTIDE CORRESPONDING TO THE PGC-1ALPHA (PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA CO-ACTIVATOR-1ALPHA) RESIDUES 139-EEPSLLKKLLLAPA-152 (UNIPROT Q9UBK2, PRGC1_HUMAN)WAS CO-CRYSTALLIZED WITH THE SF-1 LBD. ; _pdbx_entry_details.entry_id 4QK4 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 B GLU 139 ? B GLU 1 3 1 Y 1 B GLU 140 ? B GLU 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 PHE N N N N 260 PHE CA C N S 261 PHE C C N N 262 PHE O O N N 263 PHE CB C N N 264 PHE CG C Y N 265 PHE CD1 C Y N 266 PHE CD2 C Y N 267 PHE CE1 C Y N 268 PHE CE2 C Y N 269 PHE CZ C Y N 270 PHE OXT O N N 271 PHE H H N N 272 PHE H2 H N N 273 PHE HA H N N 274 PHE HB2 H N N 275 PHE HB3 H N N 276 PHE HD1 H N N 277 PHE HD2 H N N 278 PHE HE1 H N N 279 PHE HE2 H N N 280 PHE HZ H N N 281 PHE HXT H N N 282 PIK P1 P N N 283 PIK O11 O N N 284 PIK O12 O N N 285 PIK O13 O N N 286 PIK CBG C N N 287 PIK CBF C N N 288 PIK CBE C N N 289 PIK CBD C N N 290 PIK CBC C N N 291 PIK CBB C N N 292 PIK CBA C N N 293 PIK CB9 C N N 294 PIK CB8 C N N 295 PIK CB7 C N N 296 PIK CB6 C N N 297 PIK CB5 C N N 298 PIK CB4 C N N 299 PIK CB3 C N N 300 PIK CB2 C N N 301 PIK CB1 C N N 302 PIK OB2 O N N 303 PIK OB1 O N N 304 PIK C8 C N S 305 PIK C7 C N N 306 PIK C1 C N R 307 PIK C2 C N R 308 PIK C3 C N S 309 PIK C4 C N R 310 PIK C5 C N R 311 PIK C6 C N S 312 PIK O1 O N N 313 PIK O2 O N N 314 PIK O3 O N N 315 PIK O4 O N N 316 PIK O5 O N N 317 PIK O6 O N N 318 PIK P4 P N N 319 PIK O41 O N N 320 PIK O42 O N N 321 PIK O43 O N N 322 PIK P5 P N N 323 PIK O51 O N N 324 PIK O52 O N N 325 PIK O53 O N N 326 PIK C9 C N N 327 PIK OA1 O N N 328 PIK CA1 C N N 329 PIK OA2 O N N 330 PIK CA2 C N N 331 PIK CA3 C N N 332 PIK CA4 C N N 333 PIK CA5 C N N 334 PIK CA6 C N N 335 PIK CA7 C N N 336 PIK CA8 C N N 337 PIK CA9 C N N 338 PIK CAA C N N 339 PIK CAB C N N 340 PIK CAC C N N 341 PIK CAD C N N 342 PIK CAE C N N 343 PIK CAF C N N 344 PIK CAG C N N 345 PIK H1 H N N 346 PIK H2 H N N 347 PIK H3 H N N 348 PIK H4 H N N 349 PIK H5 H N N 350 PIK H6 H N N 351 PIK H7 H N N 352 PIK H8 H N N 353 PIK H9 H N N 354 PIK H10 H N N 355 PIK H11 H N N 356 PIK H12 H N N 357 PIK H13 H N N 358 PIK H14 H N N 359 PIK H15 H N N 360 PIK H16 H N N 361 PIK H17 H N N 362 PIK H18 H N N 363 PIK H19 H N N 364 PIK H20 H N N 365 PIK H21 H N N 366 PIK H22 H N N 367 PIK H23 H N N 368 PIK H24 H N N 369 PIK H25 H N N 370 PIK H26 H N N 371 PIK H27 H N N 372 PIK H28 H N N 373 PIK H29 H N N 374 PIK H30 H N N 375 PIK H31 H N N 376 PIK H32 H N N 377 PIK H33 H N N 378 PIK H34 H N N 379 PIK H35 H N N 380 PIK H36 H N N 381 PIK H37 H N N 382 PIK H38 H N N 383 PIK H39 H N N 384 PIK H40 H N N 385 PIK H41 H N N 386 PIK H42 H N N 387 PIK H43 H N N 388 PIK H44 H N N 389 PIK H45 H N N 390 PIK H46 H N N 391 PIK H47 H N N 392 PIK H48 H N N 393 PIK H49 H N N 394 PIK H50 H N N 395 PIK H51 H N N 396 PIK H52 H N N 397 PIK H53 H N N 398 PIK H54 H N N 399 PIK H55 H N N 400 PIK H56 H N N 401 PIK H57 H N N 402 PIK H58 H N N 403 PIK H59 H N N 404 PIK H60 H N N 405 PIK H61 H N N 406 PIK H62 H N N 407 PIK H63 H N N 408 PIK H64 H N N 409 PIK H65 H N N 410 PIK H66 H N N 411 PIK H67 H N N 412 PIK H68 H N N 413 PIK H69 H N N 414 PIK H70 H N N 415 PIK H71 H N N 416 PIK H72 H N N 417 PIK H73 H N N 418 PIK H74 H N N 419 PIK H75 H N N 420 PIK H76 H N N 421 PIK H77 H N N 422 PIK H78 H N N 423 PIK H79 H N N 424 PIK H80 H N N 425 PIK H81 H N N 426 PRO N N N N 427 PRO CA C N S 428 PRO C C N N 429 PRO O O N N 430 PRO CB C N N 431 PRO CG C N N 432 PRO CD C N N 433 PRO OXT O N N 434 PRO H H N N 435 PRO HA H N N 436 PRO HB2 H N N 437 PRO HB3 H N N 438 PRO HG2 H N N 439 PRO HG3 H N N 440 PRO HD2 H N N 441 PRO HD3 H N N 442 PRO HXT H N N 443 SER N N N N 444 SER CA C N S 445 SER C C N N 446 SER O O N N 447 SER CB C N N 448 SER OG O N N 449 SER OXT O N N 450 SER H H N N 451 SER H2 H N N 452 SER HA H N N 453 SER HB2 H N N 454 SER HB3 H N N 455 SER HG H N N 456 SER HXT H N N 457 THR N N N N 458 THR CA C N S 459 THR C C N N 460 THR O O N N 461 THR CB C N R 462 THR OG1 O N N 463 THR CG2 C N N 464 THR OXT O N N 465 THR H H N N 466 THR H2 H N N 467 THR HA H N N 468 THR HB H N N 469 THR HG1 H N N 470 THR HG21 H N N 471 THR HG22 H N N 472 THR HG23 H N N 473 THR HXT H N N 474 TRP N N N N 475 TRP CA C N S 476 TRP C C N N 477 TRP O O N N 478 TRP CB C N N 479 TRP CG C Y N 480 TRP CD1 C Y N 481 TRP CD2 C Y N 482 TRP NE1 N Y N 483 TRP CE2 C Y N 484 TRP CE3 C Y N 485 TRP CZ2 C Y N 486 TRP CZ3 C Y N 487 TRP CH2 C Y N 488 TRP OXT O N N 489 TRP H H N N 490 TRP H2 H N N 491 TRP HA H N N 492 TRP HB2 H N N 493 TRP HB3 H N N 494 TRP HD1 H N N 495 TRP HE1 H N N 496 TRP HE3 H N N 497 TRP HZ2 H N N 498 TRP HZ3 H N N 499 TRP HH2 H N N 500 TRP HXT H N N 501 TYR N N N N 502 TYR CA C N S 503 TYR C C N N 504 TYR O O N N 505 TYR CB C N N 506 TYR CG C Y N 507 TYR CD1 C Y N 508 TYR CD2 C Y N 509 TYR CE1 C Y N 510 TYR CE2 C Y N 511 TYR CZ C Y N 512 TYR OH O N N 513 TYR OXT O N N 514 TYR H H N N 515 TYR H2 H N N 516 TYR HA H N N 517 TYR HB2 H N N 518 TYR HB3 H N N 519 TYR HD1 H N N 520 TYR HD2 H N N 521 TYR HE1 H N N 522 TYR HE2 H N N 523 TYR HH H N N 524 TYR HXT H N N 525 VAL N N N N 526 VAL CA C N S 527 VAL C C N N 528 VAL O O N N 529 VAL CB C N N 530 VAL CG1 C N N 531 VAL CG2 C N N 532 VAL OXT O N N 533 VAL H H N N 534 VAL H2 H N N 535 VAL HA H N N 536 VAL HB H N N 537 VAL HG11 H N N 538 VAL HG12 H N N 539 VAL HG13 H N N 540 VAL HG21 H N N 541 VAL HG22 H N N 542 VAL HG23 H N N 543 VAL HXT H N N 544 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 PHE N CA sing N N 246 PHE N H sing N N 247 PHE N H2 sing N N 248 PHE CA C sing N N 249 PHE CA CB sing N N 250 PHE CA HA sing N N 251 PHE C O doub N N 252 PHE C OXT sing N N 253 PHE CB CG sing N N 254 PHE CB HB2 sing N N 255 PHE CB HB3 sing N N 256 PHE CG CD1 doub Y N 257 PHE CG CD2 sing Y N 258 PHE CD1 CE1 sing Y N 259 PHE CD1 HD1 sing N N 260 PHE CD2 CE2 doub Y N 261 PHE CD2 HD2 sing N N 262 PHE CE1 CZ doub Y N 263 PHE CE1 HE1 sing N N 264 PHE CE2 CZ sing Y N 265 PHE CE2 HE2 sing N N 266 PHE CZ HZ sing N N 267 PHE OXT HXT sing N N 268 PIK CA2 CA3 sing N N 269 PIK CA2 CA1 sing N N 270 PIK OA1 CA1 sing N N 271 PIK OA1 C9 sing N N 272 PIK CA3 CA4 sing N N 273 PIK O3 C3 sing N N 274 PIK OB2 CB1 doub N N 275 PIK CA1 OA2 doub N N 276 PIK O41 P4 doub N N 277 PIK C9 C8 sing N N 278 PIK OB1 CB1 sing N N 279 PIK OB1 C8 sing N N 280 PIK CB1 CB2 sing N N 281 PIK CA4 CA5 sing N N 282 PIK CA5 CA6 sing N N 283 PIK C3 C2 sing N N 284 PIK C3 C4 sing N N 285 PIK C8 C7 sing N N 286 PIK P4 O42 sing N N 287 PIK P4 O4 sing N N 288 PIK P4 O43 sing N N 289 PIK O2 C2 sing N N 290 PIK C2 C1 sing N N 291 PIK CB3 CB2 sing N N 292 PIK CB3 CB4 sing N N 293 PIK O4 C4 sing N N 294 PIK C7 O13 sing N N 295 PIK O13 P1 sing N N 296 PIK C4 C5 sing N N 297 PIK CA6 CA7 sing N N 298 PIK CB5 CB4 sing N N 299 PIK CB5 CB6 sing N N 300 PIK CA7 CA8 sing N N 301 PIK C1 O1 sing N N 302 PIK C1 C6 sing N N 303 PIK O11 P1 doub N N 304 PIK O1 P1 sing N N 305 PIK P1 O12 sing N N 306 PIK CB6 CB7 sing N N 307 PIK C5 C6 sing N N 308 PIK C5 O5 sing N N 309 PIK CA9 CA8 sing N N 310 PIK CA9 CAA sing N N 311 PIK C6 O6 sing N N 312 PIK O5 P5 sing N N 313 PIK CB7 CB8 sing N N 314 PIK CAB CAA sing N N 315 PIK CAB CAC sing N N 316 PIK O53 P5 doub N N 317 PIK P5 O52 sing N N 318 PIK P5 O51 sing N N 319 PIK CB8 CB9 sing N N 320 PIK CAC CAD sing N N 321 PIK CAD CAE sing N N 322 PIK CB9 CBA sing N N 323 PIK CBC CBB sing N N 324 PIK CBC CBD sing N N 325 PIK CBB CBA sing N N 326 PIK CBD CBE sing N N 327 PIK CAE CAF sing N N 328 PIK CBE CBF sing N N 329 PIK CAF CAG sing N N 330 PIK CBF CBG sing N N 331 PIK O12 H1 sing N N 332 PIK CBG H2 sing N N 333 PIK CBG H3 sing N N 334 PIK CBG H4 sing N N 335 PIK CBF H5 sing N N 336 PIK CBF H6 sing N N 337 PIK CBE H7 sing N N 338 PIK CBE H8 sing N N 339 PIK CBD H9 sing N N 340 PIK CBD H10 sing N N 341 PIK CBC H11 sing N N 342 PIK CBC H12 sing N N 343 PIK CBB H13 sing N N 344 PIK CBB H14 sing N N 345 PIK CBA H15 sing N N 346 PIK CBA H16 sing N N 347 PIK CB9 H17 sing N N 348 PIK CB9 H18 sing N N 349 PIK CB8 H19 sing N N 350 PIK CB8 H20 sing N N 351 PIK CB7 H21 sing N N 352 PIK CB7 H22 sing N N 353 PIK CB6 H23 sing N N 354 PIK CB6 H24 sing N N 355 PIK CB5 H25 sing N N 356 PIK CB5 H26 sing N N 357 PIK CB4 H27 sing N N 358 PIK CB4 H28 sing N N 359 PIK CB3 H29 sing N N 360 PIK CB3 H30 sing N N 361 PIK CB2 H31 sing N N 362 PIK CB2 H32 sing N N 363 PIK C8 H33 sing N N 364 PIK C7 H34 sing N N 365 PIK C7 H35 sing N N 366 PIK C1 H36 sing N N 367 PIK C2 H37 sing N N 368 PIK C3 H38 sing N N 369 PIK C4 H39 sing N N 370 PIK C5 H40 sing N N 371 PIK C6 H41 sing N N 372 PIK O2 H42 sing N N 373 PIK O3 H43 sing N N 374 PIK O6 H44 sing N N 375 PIK O42 H45 sing N N 376 PIK O43 H46 sing N N 377 PIK O51 H47 sing N N 378 PIK O52 H48 sing N N 379 PIK C9 H49 sing N N 380 PIK C9 H50 sing N N 381 PIK CA2 H51 sing N N 382 PIK CA2 H52 sing N N 383 PIK CA3 H53 sing N N 384 PIK CA3 H54 sing N N 385 PIK CA4 H55 sing N N 386 PIK CA4 H56 sing N N 387 PIK CA5 H57 sing N N 388 PIK CA5 H58 sing N N 389 PIK CA6 H59 sing N N 390 PIK CA6 H60 sing N N 391 PIK CA7 H61 sing N N 392 PIK CA7 H62 sing N N 393 PIK CA8 H63 sing N N 394 PIK CA8 H64 sing N N 395 PIK CA9 H65 sing N N 396 PIK CA9 H66 sing N N 397 PIK CAA H67 sing N N 398 PIK CAA H68 sing N N 399 PIK CAB H69 sing N N 400 PIK CAB H70 sing N N 401 PIK CAC H71 sing N N 402 PIK CAC H72 sing N N 403 PIK CAD H73 sing N N 404 PIK CAD H74 sing N N 405 PIK CAE H75 sing N N 406 PIK CAE H76 sing N N 407 PIK CAF H77 sing N N 408 PIK CAF H78 sing N N 409 PIK CAG H79 sing N N 410 PIK CAG H80 sing N N 411 PIK CAG H81 sing N N 412 PRO N CA sing N N 413 PRO N CD sing N N 414 PRO N H sing N N 415 PRO CA C sing N N 416 PRO CA CB sing N N 417 PRO CA HA sing N N 418 PRO C O doub N N 419 PRO C OXT sing N N 420 PRO CB CG sing N N 421 PRO CB HB2 sing N N 422 PRO CB HB3 sing N N 423 PRO CG CD sing N N 424 PRO CG HG2 sing N N 425 PRO CG HG3 sing N N 426 PRO CD HD2 sing N N 427 PRO CD HD3 sing N N 428 PRO OXT HXT sing N N 429 SER N CA sing N N 430 SER N H sing N N 431 SER N H2 sing N N 432 SER CA C sing N N 433 SER CA CB sing N N 434 SER CA HA sing N N 435 SER C O doub N N 436 SER C OXT sing N N 437 SER CB OG sing N N 438 SER CB HB2 sing N N 439 SER CB HB3 sing N N 440 SER OG HG sing N N 441 SER OXT HXT sing N N 442 THR N CA sing N N 443 THR N H sing N N 444 THR N H2 sing N N 445 THR CA C sing N N 446 THR CA CB sing N N 447 THR CA HA sing N N 448 THR C O doub N N 449 THR C OXT sing N N 450 THR CB OG1 sing N N 451 THR CB CG2 sing N N 452 THR CB HB sing N N 453 THR OG1 HG1 sing N N 454 THR CG2 HG21 sing N N 455 THR CG2 HG22 sing N N 456 THR CG2 HG23 sing N N 457 THR OXT HXT sing N N 458 TRP N CA sing N N 459 TRP N H sing N N 460 TRP N H2 sing N N 461 TRP CA C sing N N 462 TRP CA CB sing N N 463 TRP CA HA sing N N 464 TRP C O doub N N 465 TRP C OXT sing N N 466 TRP CB CG sing N N 467 TRP CB HB2 sing N N 468 TRP CB HB3 sing N N 469 TRP CG CD1 doub Y N 470 TRP CG CD2 sing Y N 471 TRP CD1 NE1 sing Y N 472 TRP CD1 HD1 sing N N 473 TRP CD2 CE2 doub Y N 474 TRP CD2 CE3 sing Y N 475 TRP NE1 CE2 sing Y N 476 TRP NE1 HE1 sing N N 477 TRP CE2 CZ2 sing Y N 478 TRP CE3 CZ3 doub Y N 479 TRP CE3 HE3 sing N N 480 TRP CZ2 CH2 doub Y N 481 TRP CZ2 HZ2 sing N N 482 TRP CZ3 CH2 sing Y N 483 TRP CZ3 HZ3 sing N N 484 TRP CH2 HH2 sing N N 485 TRP OXT HXT sing N N 486 TYR N CA sing N N 487 TYR N H sing N N 488 TYR N H2 sing N N 489 TYR CA C sing N N 490 TYR CA CB sing N N 491 TYR CA HA sing N N 492 TYR C O doub N N 493 TYR C OXT sing N N 494 TYR CB CG sing N N 495 TYR CB HB2 sing N N 496 TYR CB HB3 sing N N 497 TYR CG CD1 doub Y N 498 TYR CG CD2 sing Y N 499 TYR CD1 CE1 sing Y N 500 TYR CD1 HD1 sing N N 501 TYR CD2 CE2 doub Y N 502 TYR CD2 HD2 sing N N 503 TYR CE1 CZ doub Y N 504 TYR CE1 HE1 sing N N 505 TYR CE2 CZ sing Y N 506 TYR CE2 HE2 sing N N 507 TYR CZ OH sing N N 508 TYR OH HH sing N N 509 TYR OXT HXT sing N N 510 VAL N CA sing N N 511 VAL N H sing N N 512 VAL N H2 sing N N 513 VAL CA C sing N N 514 VAL CA CB sing N N 515 VAL CA HA sing N N 516 VAL C O doub N N 517 VAL C OXT sing N N 518 VAL CB CG1 sing N N 519 VAL CB CG2 sing N N 520 VAL CB HB sing N N 521 VAL CG1 HG11 sing N N 522 VAL CG1 HG12 sing N N 523 VAL CG1 HG13 sing N N 524 VAL CG2 HG21 sing N N 525 VAL CG2 HG22 sing N N 526 VAL CG2 HG23 sing N N 527 VAL OXT HXT sing N N 528 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1YOW _pdbx_initial_refinement_model.details 'PDB entry 1YOW' # _atom_sites.entry_id 4QK4 _atom_sites.fract_transf_matrix[1][1] 0.013333 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013333 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.007213 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_