data_4QKH # _entry.id 4QKH # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.329 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4QKH RCSB RCSB086168 WWPDB D_1000086168 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4QKG . unspecified PDB 4QKI . unspecified PDB 4QKJ . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4QKH _pdbx_database_status.recvd_initial_deposition_date 2014-06-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Skalova, T.' 1 ? 'Blaha, J.' 2 ? 'Harlos, K.' 3 ? 'Duskova, J.' 4 ? 'Koval, T.' 5 ? 'Stransky, J.' 6 ? 'Hasek, J.' 7 ? 'Vanek, O.' 8 ? 'Dohnalek, J.' 9 ? # _citation.id primary _citation.title 'Four crystal structures of human LLT1, a ligand of human NKR-P1, in varied glycosylation and oligomerization states' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 71 _citation.page_first 578 _citation.page_last 591 _citation.year 2015 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25760607 _citation.pdbx_database_id_DOI 10.1107/S1399004714027928 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Skalova, T.' 1 ? primary 'Blaha, J.' 2 ? primary 'Harlos, K.' 3 ? primary 'Duskova, J.' 4 ? primary 'Koval, T.' 5 ? primary 'Stransky, J.' 6 ? primary 'Hasek, J.' 7 ? primary 'Vanek, O.' 8 ? primary 'Dohnalek, J.' 9 ? # _cell.entry_id 4QKH _cell.length_a 50.870 _cell.length_b 57.820 _cell.length_c 82.250 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QKH _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'C-type lectin domain family 2 member D' 15692.363 2 ? H176C 'extracellular part, UNP residues 72-191' ? 2 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 4 ? ? ? ? 3 water nat water 18.015 214 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Lectin-like NK cell receptor, Lectin-like transcript 1, LLT-1, Osteoclast inhibitory lectin' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;ITGQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWING TEWTRQFPILGAGECAYLNDKGASSARCYTERKWICSKSDIHVGTKHHHHHHHHG ; _entity_poly.pdbx_seq_one_letter_code_can ;ITGQAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWING TEWTRQFPILGAGECAYLNDKGASSARCYTERKWICSKSDIHVGTKHHHHHHHHG ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ILE n 1 2 THR n 1 3 GLY n 1 4 GLN n 1 5 ALA n 1 6 ALA n 1 7 CYS n 1 8 PRO n 1 9 GLU n 1 10 SER n 1 11 TRP n 1 12 ILE n 1 13 GLY n 1 14 PHE n 1 15 GLN n 1 16 ARG n 1 17 LYS n 1 18 CYS n 1 19 PHE n 1 20 TYR n 1 21 PHE n 1 22 SER n 1 23 ASP n 1 24 ASP n 1 25 THR n 1 26 LYS n 1 27 ASN n 1 28 TRP n 1 29 THR n 1 30 SER n 1 31 SER n 1 32 GLN n 1 33 ARG n 1 34 PHE n 1 35 CYS n 1 36 ASP n 1 37 SER n 1 38 GLN n 1 39 ASP n 1 40 ALA n 1 41 ASP n 1 42 LEU n 1 43 ALA n 1 44 GLN n 1 45 VAL n 1 46 GLU n 1 47 SER n 1 48 PHE n 1 49 GLN n 1 50 GLU n 1 51 LEU n 1 52 ASN n 1 53 PHE n 1 54 LEU n 1 55 LEU n 1 56 ARG n 1 57 TYR n 1 58 LYS n 1 59 GLY n 1 60 PRO n 1 61 SER n 1 62 ASP n 1 63 HIS n 1 64 TRP n 1 65 ILE n 1 66 GLY n 1 67 LEU n 1 68 SER n 1 69 ARG n 1 70 GLU n 1 71 GLN n 1 72 GLY n 1 73 GLN n 1 74 PRO n 1 75 TRP n 1 76 LYS n 1 77 TRP n 1 78 ILE n 1 79 ASN n 1 80 GLY n 1 81 THR n 1 82 GLU n 1 83 TRP n 1 84 THR n 1 85 ARG n 1 86 GLN n 1 87 PHE n 1 88 PRO n 1 89 ILE n 1 90 LEU n 1 91 GLY n 1 92 ALA n 1 93 GLY n 1 94 GLU n 1 95 CYS n 1 96 ALA n 1 97 TYR n 1 98 LEU n 1 99 ASN n 1 100 ASP n 1 101 LYS n 1 102 GLY n 1 103 ALA n 1 104 SER n 1 105 SER n 1 106 ALA n 1 107 ARG n 1 108 CYS n 1 109 TYR n 1 110 THR n 1 111 GLU n 1 112 ARG n 1 113 LYS n 1 114 TRP n 1 115 ILE n 1 116 CYS n 1 117 SER n 1 118 LYS n 1 119 SER n 1 120 ASP n 1 121 ILE n 1 122 HIS n 1 123 VAL n 1 124 GLY n 1 125 THR n 1 126 LYS n 1 127 HIS n 1 128 HIS n 1 129 HIS n 1 130 HIS n 1 131 HIS n 1 132 HIS n 1 133 HIS n 1 134 HIS n 1 135 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'CLAX, CLEC2B, CLEC2D, LLT1, OCIL' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'protein secreted into medium' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name human _entity_src_gen.pdbx_host_org_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 9606 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line 'HEK293S GnTI-' _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pTT28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code CLC2D_HUMAN _struct_ref.pdbx_db_accession Q9UHP7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QAACPESWIGFQRKCFYFSDDTKNWTSSQRFCDSQDADLAQVESFQELNFLLRYKGPSDHWIGLSREQGQPWKWINGTEW TRQFPILGAGECAYLNDKGASSARHYTERKWICSKSDIHV ; _struct_ref.pdbx_align_begin 72 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4QKH A 4 ? 123 ? Q9UHP7 72 ? 191 ? 72 191 2 1 4QKH B 4 ? 123 ? Q9UHP7 72 ? 191 ? 72 191 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QKH ILE A 1 ? UNP Q9UHP7 ? ? 'expression tag' 69 1 1 4QKH THR A 2 ? UNP Q9UHP7 ? ? 'expression tag' 70 2 1 4QKH GLY A 3 ? UNP Q9UHP7 ? ? 'expression tag' 71 3 1 4QKH CYS A 108 ? UNP Q9UHP7 HIS 176 'engineered mutation' 176 4 1 4QKH GLY A 124 ? UNP Q9UHP7 ? ? 'expression tag' 192 5 1 4QKH THR A 125 ? UNP Q9UHP7 ? ? 'expression tag' 193 6 1 4QKH LYS A 126 ? UNP Q9UHP7 ? ? 'expression tag' 194 7 1 4QKH HIS A 127 ? UNP Q9UHP7 ? ? 'expression tag' 195 8 1 4QKH HIS A 128 ? UNP Q9UHP7 ? ? 'expression tag' 196 9 1 4QKH HIS A 129 ? UNP Q9UHP7 ? ? 'expression tag' 197 10 1 4QKH HIS A 130 ? UNP Q9UHP7 ? ? 'expression tag' 198 11 1 4QKH HIS A 131 ? UNP Q9UHP7 ? ? 'expression tag' 199 12 1 4QKH HIS A 132 ? UNP Q9UHP7 ? ? 'expression tag' 200 13 1 4QKH HIS A 133 ? UNP Q9UHP7 ? ? 'expression tag' 201 14 1 4QKH HIS A 134 ? UNP Q9UHP7 ? ? 'expression tag' 202 15 1 4QKH GLY A 135 ? UNP Q9UHP7 ? ? 'expression tag' 203 16 2 4QKH ILE B 1 ? UNP Q9UHP7 ? ? 'expression tag' 69 17 2 4QKH THR B 2 ? UNP Q9UHP7 ? ? 'expression tag' 70 18 2 4QKH GLY B 3 ? UNP Q9UHP7 ? ? 'expression tag' 71 19 2 4QKH CYS B 108 ? UNP Q9UHP7 HIS 176 'engineered mutation' 176 20 2 4QKH GLY B 124 ? UNP Q9UHP7 ? ? 'expression tag' 192 21 2 4QKH THR B 125 ? UNP Q9UHP7 ? ? 'expression tag' 193 22 2 4QKH LYS B 126 ? UNP Q9UHP7 ? ? 'expression tag' 194 23 2 4QKH HIS B 127 ? UNP Q9UHP7 ? ? 'expression tag' 195 24 2 4QKH HIS B 128 ? UNP Q9UHP7 ? ? 'expression tag' 196 25 2 4QKH HIS B 129 ? UNP Q9UHP7 ? ? 'expression tag' 197 26 2 4QKH HIS B 130 ? UNP Q9UHP7 ? ? 'expression tag' 198 27 2 4QKH HIS B 131 ? UNP Q9UHP7 ? ? 'expression tag' 199 28 2 4QKH HIS B 132 ? UNP Q9UHP7 ? ? 'expression tag' 200 29 2 4QKH HIS B 133 ? UNP Q9UHP7 ? ? 'expression tag' 201 30 2 4QKH HIS B 134 ? UNP Q9UHP7 ? ? 'expression tag' 202 31 2 4QKH GLY B 135 ? UNP Q9UHP7 ? ? 'expression tag' 203 32 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ? 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4QKH _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.93 _exptl_crystal.density_percent_sol 36.17 _exptl_crystal.description 'THE ENTRY CONTAINS FRIEDEL PAIRS IN F_PLUS/MINUS COLUMNS.' _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '30%(w/v) polyethylene glycol 6000, 0.1M HEPES, pH 7.0 , VAPOR DIFFUSION, SITTING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 2M' _diffrn_detector.pdbx_collection_date 2012-06-30 _diffrn_detector.details 'Kirkpatrick Baez mirror pair' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9200 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I04-1' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I04-1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9200 # _reflns.entry_id 4QKH _reflns.observed_criterion_sigma_I -3.7 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 47.3 _reflns.d_resolution_high 1.8 _reflns.number_obs 21104 _reflns.number_all 21104 _reflns.percent_possible_obs 91.8 _reflns.pdbx_Rmerge_I_obs 0.093 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.3 _reflns.B_iso_Wilson_estimate 20.7 _reflns.pdbx_redundancy 8.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.80 _reflns_shell.d_res_low 1.84 _reflns_shell.percent_possible_all 81.0 _reflns_shell.Rmerge_I_obs 0.462 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.0 _reflns_shell.pdbx_redundancy 5.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1087 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4QKH _refine.ls_number_reflns_obs 21045 _refine.ls_number_reflns_all 21045 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 47.30 _refine.ls_d_res_high 1.80 _refine.ls_percent_reflns_obs 90.91 _refine.ls_R_factor_obs 0.18041 _refine.ls_R_factor_all 0.18041 _refine.ls_R_factor_R_work 0.17499 _refine.ls_R_factor_R_free 0.24992 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 1104 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 27.584 _refine.aniso_B[1][1] -0.39 _refine.aniso_B[2][2] 1.14 _refine.aniso_B[3][3] -0.75 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method 'throughout (except for the last cycle)' _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS, SF FILE CONTAINS FRIEDEL PAIRS UNDER I/F_MINUS AND I/F_PLUS COLUMNS.' _refine.pdbx_starting_model 3HUP _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'CCP4 STEREOCHEMISTRY LIBRARY, VERSION 6.4.0' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R 0.148 _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.065 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.024 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1987 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 56 _refine_hist.number_atoms_solvent 214 _refine_hist.number_atoms_total 2257 _refine_hist.d_res_high 1.80 _refine_hist.d_res_low 47.30 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.016 0.020 ? 2160 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.003 0.020 ? 1889 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.702 1.934 ? 2941 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.933 3.006 ? 4333 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 7.259 5.000 ? 258 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 36.550 23.860 ? 114 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 15.024 15.000 ? 342 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15.813 15.000 ? 15 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.107 0.200 ? 291 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.008 0.020 ? 2479 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 556 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 2.425 2.495 ? 990 ? 'X-RAY DIFFRACTION' r_mcbond_other 2.424 2.491 ? 989 ? 'X-RAY DIFFRACTION' r_mcangle_it 3.560 3.729 ? 1238 ? 'X-RAY DIFFRACTION' r_mcangle_other 3.560 3.732 ? 1239 ? 'X-RAY DIFFRACTION' r_scbond_it 2.750 2.910 ? 1170 ? 'X-RAY DIFFRACTION' r_scbond_other 2.749 2.912 ? 1171 ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other 4.280 4.263 ? 1696 ? 'X-RAY DIFFRACTION' r_long_range_B_refined 6.546 21.934 ? 2639 ? 'X-RAY DIFFRACTION' r_long_range_B_other 6.340 21.579 ? 2554 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.800 _refine_ls_shell.d_res_low 1.847 _refine_ls_shell.number_reflns_R_work 1336 _refine_ls_shell.R_factor_R_work 0.219 _refine_ls_shell.percent_reflns_obs 80.29 _refine_ls_shell.R_factor_R_free 0.310 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 79 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1336 _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4QKH _struct.title 'Dimeric form of human LLT1, a ligand for NKR-P1' _struct.pdbx_descriptor 'C-type lectin domain family 2 member D' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QKH _struct_keywords.pdbx_keywords 'IMMUNE SYSTEM' _struct_keywords.text ;C-type lectin like fold, ligand for human receptor NKR-P1, glycosylation; deglycosylated after the first GlcNac unit, anchored in membrane on cell surface, IMMUNE SYSTEM ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? H N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 27 ? GLN A 38 ? ASN A 95 GLN A 106 1 ? 12 HELX_P HELX_P2 2 SER A 47 ? GLY A 59 ? SER A 115 GLY A 127 1 ? 13 HELX_P HELX_P3 3 ASN B 27 ? GLN B 38 ? ASN B 95 GLN B 106 1 ? 12 HELX_P HELX_P4 4 SER B 47 ? GLY B 59 ? SER B 115 GLY B 127 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 18 SG ? ? A CYS 75 A CYS 86 1_555 ? ? ? ? ? ? ? 2.074 ? ? disulf2 disulf ? ? A CYS 35 SG ? ? ? 1_555 A CYS 116 SG ? ? A CYS 103 A CYS 184 1_555 ? ? ? ? ? ? ? 2.144 ? ? disulf3 disulf ? ? A CYS 95 SG ? ? ? 1_555 A CYS 108 SG ? ? A CYS 163 A CYS 176 1_555 ? ? ? ? ? ? ? 2.002 ? ? disulf4 disulf ? ? B CYS 7 SG ? ? ? 1_555 B CYS 18 SG ? ? B CYS 75 B CYS 86 1_555 ? ? ? ? ? ? ? 2.071 ? ? disulf5 disulf ? ? B CYS 35 SG ? ? ? 1_555 B CYS 116 SG ? ? B CYS 103 B CYS 184 1_555 ? ? ? ? ? ? ? 2.072 ? ? disulf6 disulf ? ? B CYS 95 SG ? ? ? 1_555 B CYS 108 SG ? ? B CYS 163 B CYS 176 1_555 ? ? ? ? ? ? ? 2.037 ? ? covale1 covale one ? A ASN 27 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 95 A NAG 301 1_555 ? ? ? ? ? ? ? 1.449 ? N-Glycosylation covale2 covale one ? A ASN 79 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 147 A NAG 302 1_555 ? ? ? ? ? ? ? 1.461 ? N-Glycosylation covale3 covale one ? B ASN 27 ND2 ? ? ? 1_555 E NAG . C1 ? ? B ASN 95 B NAG 301 1_555 ? ? ? ? ? ? ? 1.464 ? N-Glycosylation covale4 covale one ? B ASN 79 ND2 ? ? ? 1_555 F NAG . C1 ? ? B ASN 147 B NAG 302 1_555 ? ? ? ? ? ? ? 1.451 ? N-Glycosylation # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? C ? 2 ? D ? 3 ? E ? 3 ? F ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel D 2 3 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel F 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 17 ? PHE A 21 ? LYS A 85 PHE A 89 A 2 ILE A 12 ? PHE A 14 ? ILE A 80 PHE A 82 A 3 ILE B 12 ? PHE B 14 ? ILE B 80 PHE B 82 A 4 LYS B 17 ? PHE B 21 ? LYS B 85 PHE B 89 A 5 LYS B 113 ? SER B 119 ? LYS B 181 SER B 187 A 6 ASP B 41 ? LEU B 42 ? ASP B 109 LEU B 110 B 1 LYS A 17 ? PHE A 21 ? LYS A 85 PHE A 89 B 2 LYS A 113 ? SER A 119 ? LYS A 181 SER A 187 B 3 HIS A 63 ? SER A 68 ? HIS A 131 SER A 136 B 4 CYS A 95 ? LEU A 98 ? CYS A 163 LEU A 166 B 5 ALA A 103 ? ALA A 106 ? ALA A 171 ALA A 174 C 1 ASP A 41 ? LEU A 42 ? ASP A 109 LEU A 110 C 2 LYS A 113 ? SER A 119 ? LYS A 181 SER A 187 D 1 HIS B 63 ? SER B 68 ? HIS B 131 SER B 136 D 2 GLY B 102 ? ALA B 106 ? GLY B 170 ALA B 174 D 3 CYS B 95 ? ASN B 99 ? CYS B 163 ASN B 167 E 1 LYS B 113 ? SER B 119 ? LYS B 181 SER B 187 E 2 HIS B 63 ? SER B 68 ? HIS B 131 SER B 136 E 3 LYS B 76 ? TRP B 77 ? LYS B 144 TRP B 145 F 1 HIS B 63 ? SER B 68 ? HIS B 131 SER B 136 F 2 CYS B 95 ? ASN B 99 ? CYS B 163 ASN B 167 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O PHE A 19 ? O PHE A 87 N ILE A 12 ? N ILE A 80 A 2 3 N GLY A 13 ? N GLY A 81 O GLY B 13 ? O GLY B 81 A 3 4 N ILE B 12 ? N ILE B 80 O PHE B 19 ? O PHE B 87 A 4 5 N CYS B 18 ? N CYS B 86 O LYS B 118 ? O LYS B 186 A 5 6 O SER B 117 ? O SER B 185 N ASP B 41 ? N ASP B 109 B 1 2 N CYS A 18 ? N CYS A 86 O LYS A 118 ? O LYS A 186 B 2 3 O LYS A 113 ? O LYS A 181 N TRP A 64 ? N TRP A 132 B 3 4 N HIS A 63 ? N HIS A 131 O LEU A 98 ? O LEU A 166 B 4 5 N TYR A 97 ? N TYR A 165 O SER A 104 ? O SER A 172 C 1 2 N ASP A 41 ? N ASP A 109 O SER A 117 ? O SER A 185 D 2 3 O GLY B 102 ? O GLY B 170 N ASN B 99 ? N ASN B 167 E 1 2 O LYS B 113 ? O LYS B 181 N TRP B 64 ? N TRP B 132 E 2 3 N SER B 68 ? N SER B 136 O LYS B 76 ? O LYS B 144 F 1 2 N HIS B 63 ? N HIS B 131 O LEU B 98 ? O LEU B 166 # _database_PDB_matrix.entry_id 4QKH _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4QKH _atom_sites.fract_transf_matrix[1][1] 0.019658 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017295 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012158 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ILE 1 69 ? ? ? A . n A 1 2 THR 2 70 70 THR THR A . n A 1 3 GLY 3 71 71 GLY GLY A . n A 1 4 GLN 4 72 72 GLN GLN A . n A 1 5 ALA 5 73 73 ALA ALA A . n A 1 6 ALA 6 74 74 ALA ALA A . n A 1 7 CYS 7 75 75 CYS CYS A . n A 1 8 PRO 8 76 76 PRO PRO A . n A 1 9 GLU 9 77 77 GLU GLU A . n A 1 10 SER 10 78 78 SER SER A . n A 1 11 TRP 11 79 79 TRP TRP A . n A 1 12 ILE 12 80 80 ILE ILE A . n A 1 13 GLY 13 81 81 GLY GLY A . n A 1 14 PHE 14 82 82 PHE PHE A . n A 1 15 GLN 15 83 83 GLN GLN A . n A 1 16 ARG 16 84 84 ARG ARG A . n A 1 17 LYS 17 85 85 LYS LYS A . n A 1 18 CYS 18 86 86 CYS CYS A . n A 1 19 PHE 19 87 87 PHE PHE A . n A 1 20 TYR 20 88 88 TYR TYR A . n A 1 21 PHE 21 89 89 PHE PHE A . n A 1 22 SER 22 90 90 SER SER A . n A 1 23 ASP 23 91 91 ASP ASP A . n A 1 24 ASP 24 92 92 ASP ASP A . n A 1 25 THR 25 93 93 THR THR A . n A 1 26 LYS 26 94 94 LYS LYS A . n A 1 27 ASN 27 95 95 ASN ASN A . n A 1 28 TRP 28 96 96 TRP TRP A . n A 1 29 THR 29 97 97 THR THR A . n A 1 30 SER 30 98 98 SER SER A . n A 1 31 SER 31 99 99 SER SER A . n A 1 32 GLN 32 100 100 GLN GLN A . n A 1 33 ARG 33 101 101 ARG ARG A . n A 1 34 PHE 34 102 102 PHE PHE A . n A 1 35 CYS 35 103 103 CYS CYS A . n A 1 36 ASP 36 104 104 ASP ASP A . n A 1 37 SER 37 105 105 SER SER A . n A 1 38 GLN 38 106 106 GLN GLN A . n A 1 39 ASP 39 107 107 ASP ASP A . n A 1 40 ALA 40 108 108 ALA ALA A . n A 1 41 ASP 41 109 109 ASP ASP A . n A 1 42 LEU 42 110 110 LEU LEU A . n A 1 43 ALA 43 111 111 ALA ALA A . n A 1 44 GLN 44 112 112 GLN GLN A . n A 1 45 VAL 45 113 113 VAL VAL A . n A 1 46 GLU 46 114 114 GLU GLU A . n A 1 47 SER 47 115 115 SER SER A . n A 1 48 PHE 48 116 116 PHE PHE A . n A 1 49 GLN 49 117 117 GLN GLN A . n A 1 50 GLU 50 118 118 GLU GLU A . n A 1 51 LEU 51 119 119 LEU LEU A . n A 1 52 ASN 52 120 120 ASN ASN A . n A 1 53 PHE 53 121 121 PHE PHE A . n A 1 54 LEU 54 122 122 LEU LEU A . n A 1 55 LEU 55 123 123 LEU LEU A . n A 1 56 ARG 56 124 124 ARG ARG A . n A 1 57 TYR 57 125 125 TYR TYR A . n A 1 58 LYS 58 126 126 LYS LYS A . n A 1 59 GLY 59 127 127 GLY GLY A . n A 1 60 PRO 60 128 128 PRO PRO A . n A 1 61 SER 61 129 129 SER SER A . n A 1 62 ASP 62 130 130 ASP ASP A . n A 1 63 HIS 63 131 131 HIS HIS A . n A 1 64 TRP 64 132 132 TRP TRP A . n A 1 65 ILE 65 133 133 ILE ILE A . n A 1 66 GLY 66 134 134 GLY GLY A . n A 1 67 LEU 67 135 135 LEU LEU A . n A 1 68 SER 68 136 136 SER SER A . n A 1 69 ARG 69 137 137 ARG ARG A . n A 1 70 GLU 70 138 138 GLU GLU A . n A 1 71 GLN 71 139 139 GLN GLN A . n A 1 72 GLY 72 140 140 GLY GLY A . n A 1 73 GLN 73 141 141 GLN GLN A . n A 1 74 PRO 74 142 142 PRO PRO A . n A 1 75 TRP 75 143 143 TRP TRP A . n A 1 76 LYS 76 144 144 LYS LYS A . n A 1 77 TRP 77 145 145 TRP TRP A . n A 1 78 ILE 78 146 146 ILE ILE A . n A 1 79 ASN 79 147 147 ASN ASN A . n A 1 80 GLY 80 148 148 GLY GLY A . n A 1 81 THR 81 149 149 THR THR A . n A 1 82 GLU 82 150 150 GLU GLU A . n A 1 83 TRP 83 151 151 TRP TRP A . n A 1 84 THR 84 152 152 THR THR A . n A 1 85 ARG 85 153 153 ARG ARG A . n A 1 86 GLN 86 154 154 GLN GLN A . n A 1 87 PHE 87 155 155 PHE PHE A . n A 1 88 PRO 88 156 156 PRO PRO A . n A 1 89 ILE 89 157 157 ILE ILE A . n A 1 90 LEU 90 158 158 LEU LEU A . n A 1 91 GLY 91 159 159 GLY GLY A . n A 1 92 ALA 92 160 160 ALA ALA A . n A 1 93 GLY 93 161 161 GLY GLY A . n A 1 94 GLU 94 162 162 GLU GLU A . n A 1 95 CYS 95 163 163 CYS CYS A . n A 1 96 ALA 96 164 164 ALA ALA A . n A 1 97 TYR 97 165 165 TYR TYR A . n A 1 98 LEU 98 166 166 LEU LEU A . n A 1 99 ASN 99 167 167 ASN ASN A . n A 1 100 ASP 100 168 168 ASP ASP A . n A 1 101 LYS 101 169 169 LYS LYS A . n A 1 102 GLY 102 170 170 GLY GLY A . n A 1 103 ALA 103 171 171 ALA ALA A . n A 1 104 SER 104 172 172 SER SER A . n A 1 105 SER 105 173 173 SER SER A . n A 1 106 ALA 106 174 174 ALA ALA A . n A 1 107 ARG 107 175 175 ARG ARG A . n A 1 108 CYS 108 176 176 CYS CYS A . n A 1 109 TYR 109 177 177 TYR TYR A . n A 1 110 THR 110 178 178 THR THR A . n A 1 111 GLU 111 179 179 GLU GLU A . n A 1 112 ARG 112 180 180 ARG ARG A . n A 1 113 LYS 113 181 181 LYS LYS A . n A 1 114 TRP 114 182 182 TRP TRP A . n A 1 115 ILE 115 183 183 ILE ILE A . n A 1 116 CYS 116 184 184 CYS CYS A . n A 1 117 SER 117 185 185 SER SER A . n A 1 118 LYS 118 186 186 LYS LYS A . n A 1 119 SER 119 187 187 SER SER A . n A 1 120 ASP 120 188 188 ASP ASP A . n A 1 121 ILE 121 189 189 ILE ILE A . n A 1 122 HIS 122 190 190 HIS HIS A . n A 1 123 VAL 123 191 191 VAL VAL A . n A 1 124 GLY 124 192 192 GLY GLY A . n A 1 125 THR 125 193 ? ? ? A . n A 1 126 LYS 126 194 ? ? ? A . n A 1 127 HIS 127 195 ? ? ? A . n A 1 128 HIS 128 196 ? ? ? A . n A 1 129 HIS 129 197 ? ? ? A . n A 1 130 HIS 130 198 ? ? ? A . n A 1 131 HIS 131 199 ? ? ? A . n A 1 132 HIS 132 200 ? ? ? A . n A 1 133 HIS 133 201 ? ? ? A . n A 1 134 HIS 134 202 ? ? ? A . n A 1 135 GLY 135 203 ? ? ? A . n B 1 1 ILE 1 69 ? ? ? B . n B 1 2 THR 2 70 ? ? ? B . n B 1 3 GLY 3 71 ? ? ? B . n B 1 4 GLN 4 72 72 GLN GLN B . n B 1 5 ALA 5 73 73 ALA ALA B . n B 1 6 ALA 6 74 74 ALA ALA B . n B 1 7 CYS 7 75 75 CYS CYS B . n B 1 8 PRO 8 76 76 PRO PRO B . n B 1 9 GLU 9 77 77 GLU GLU B . n B 1 10 SER 10 78 78 SER SER B . n B 1 11 TRP 11 79 79 TRP TRP B . n B 1 12 ILE 12 80 80 ILE ILE B . n B 1 13 GLY 13 81 81 GLY GLY B . n B 1 14 PHE 14 82 82 PHE PHE B . n B 1 15 GLN 15 83 83 GLN GLN B . n B 1 16 ARG 16 84 84 ARG ARG B . n B 1 17 LYS 17 85 85 LYS LYS B . n B 1 18 CYS 18 86 86 CYS CYS B . n B 1 19 PHE 19 87 87 PHE PHE B . n B 1 20 TYR 20 88 88 TYR TYR B . n B 1 21 PHE 21 89 89 PHE PHE B . n B 1 22 SER 22 90 90 SER SER B . n B 1 23 ASP 23 91 91 ASP ASP B . n B 1 24 ASP 24 92 92 ASP ASP B . n B 1 25 THR 25 93 93 THR THR B . n B 1 26 LYS 26 94 94 LYS LYS B . n B 1 27 ASN 27 95 95 ASN ASN B . n B 1 28 TRP 28 96 96 TRP TRP B . n B 1 29 THR 29 97 97 THR THR B . n B 1 30 SER 30 98 98 SER SER B . n B 1 31 SER 31 99 99 SER SER B . n B 1 32 GLN 32 100 100 GLN GLN B . n B 1 33 ARG 33 101 101 ARG ARG B . n B 1 34 PHE 34 102 102 PHE PHE B . n B 1 35 CYS 35 103 103 CYS CYS B . n B 1 36 ASP 36 104 104 ASP ASP B . n B 1 37 SER 37 105 105 SER SER B . n B 1 38 GLN 38 106 106 GLN GLN B . n B 1 39 ASP 39 107 107 ASP ASP B . n B 1 40 ALA 40 108 108 ALA ALA B . n B 1 41 ASP 41 109 109 ASP ASP B . n B 1 42 LEU 42 110 110 LEU LEU B . n B 1 43 ALA 43 111 111 ALA ALA B . n B 1 44 GLN 44 112 112 GLN GLN B . n B 1 45 VAL 45 113 113 VAL VAL B . n B 1 46 GLU 46 114 114 GLU GLU B . n B 1 47 SER 47 115 115 SER SER B . n B 1 48 PHE 48 116 116 PHE PHE B . n B 1 49 GLN 49 117 117 GLN GLN B . n B 1 50 GLU 50 118 118 GLU GLU B . n B 1 51 LEU 51 119 119 LEU LEU B . n B 1 52 ASN 52 120 120 ASN ASN B . n B 1 53 PHE 53 121 121 PHE PHE B . n B 1 54 LEU 54 122 122 LEU LEU B . n B 1 55 LEU 55 123 123 LEU LEU B . n B 1 56 ARG 56 124 124 ARG ARG B . n B 1 57 TYR 57 125 125 TYR TYR B . n B 1 58 LYS 58 126 126 LYS LYS B . n B 1 59 GLY 59 127 127 GLY GLY B . n B 1 60 PRO 60 128 128 PRO PRO B . n B 1 61 SER 61 129 129 SER SER B . n B 1 62 ASP 62 130 130 ASP ASP B . n B 1 63 HIS 63 131 131 HIS HIS B . n B 1 64 TRP 64 132 132 TRP TRP B . n B 1 65 ILE 65 133 133 ILE ILE B . n B 1 66 GLY 66 134 134 GLY GLY B . n B 1 67 LEU 67 135 135 LEU LEU B . n B 1 68 SER 68 136 136 SER SER B . n B 1 69 ARG 69 137 137 ARG ARG B . n B 1 70 GLU 70 138 138 GLU GLU B . n B 1 71 GLN 71 139 139 GLN GLN B . n B 1 72 GLY 72 140 140 GLY GLY B . n B 1 73 GLN 73 141 141 GLN GLN B . n B 1 74 PRO 74 142 142 PRO PRO B . n B 1 75 TRP 75 143 143 TRP TRP B . n B 1 76 LYS 76 144 144 LYS LYS B . n B 1 77 TRP 77 145 145 TRP TRP B . n B 1 78 ILE 78 146 146 ILE ILE B . n B 1 79 ASN 79 147 147 ASN ASN B . n B 1 80 GLY 80 148 148 GLY GLY B . n B 1 81 THR 81 149 149 THR THR B . n B 1 82 GLU 82 150 150 GLU GLU B . n B 1 83 TRP 83 151 151 TRP TRP B . n B 1 84 THR 84 152 152 THR THR B . n B 1 85 ARG 85 153 153 ARG ARG B . n B 1 86 GLN 86 154 154 GLN GLN B . n B 1 87 PHE 87 155 155 PHE PHE B . n B 1 88 PRO 88 156 156 PRO PRO B . n B 1 89 ILE 89 157 157 ILE ILE B . n B 1 90 LEU 90 158 158 LEU LEU B . n B 1 91 GLY 91 159 159 GLY GLY B . n B 1 92 ALA 92 160 160 ALA ALA B . n B 1 93 GLY 93 161 161 GLY GLY B . n B 1 94 GLU 94 162 162 GLU GLU B . n B 1 95 CYS 95 163 163 CYS CYS B . n B 1 96 ALA 96 164 164 ALA ALA B . n B 1 97 TYR 97 165 165 TYR TYR B . n B 1 98 LEU 98 166 166 LEU LEU B . n B 1 99 ASN 99 167 167 ASN ASN B . n B 1 100 ASP 100 168 168 ASP ASP B . n B 1 101 LYS 101 169 169 LYS LYS B . n B 1 102 GLY 102 170 170 GLY GLY B . n B 1 103 ALA 103 171 171 ALA ALA B . n B 1 104 SER 104 172 172 SER SER B . n B 1 105 SER 105 173 173 SER SER B . n B 1 106 ALA 106 174 174 ALA ALA B . n B 1 107 ARG 107 175 175 ARG ARG B . n B 1 108 CYS 108 176 176 CYS CYS B . n B 1 109 TYR 109 177 177 TYR TYR B . n B 1 110 THR 110 178 178 THR THR B . n B 1 111 GLU 111 179 179 GLU GLU B . n B 1 112 ARG 112 180 180 ARG ARG B . n B 1 113 LYS 113 181 181 LYS LYS B . n B 1 114 TRP 114 182 182 TRP TRP B . n B 1 115 ILE 115 183 183 ILE ILE B . n B 1 116 CYS 116 184 184 CYS CYS B . n B 1 117 SER 117 185 185 SER SER B . n B 1 118 LYS 118 186 186 LYS LYS B . n B 1 119 SER 119 187 187 SER SER B . n B 1 120 ASP 120 188 188 ASP ASP B . n B 1 121 ILE 121 189 189 ILE ILE B . n B 1 122 HIS 122 190 190 HIS HIS B . n B 1 123 VAL 123 191 191 VAL VAL B . n B 1 124 GLY 124 192 192 GLY GLY B . n B 1 125 THR 125 193 ? ? ? B . n B 1 126 LYS 126 194 ? ? ? B . n B 1 127 HIS 127 195 ? ? ? B . n B 1 128 HIS 128 196 ? ? ? B . n B 1 129 HIS 129 197 ? ? ? B . n B 1 130 HIS 130 198 ? ? ? B . n B 1 131 HIS 131 199 ? ? ? B . n B 1 132 HIS 132 200 ? ? ? B . n B 1 133 HIS 133 201 ? ? ? B . n B 1 134 HIS 134 202 ? ? ? B . n B 1 135 GLY 135 203 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 NAG 1 301 511 NAG NAG A . D 2 NAG 1 302 512 NAG NAG A . E 2 NAG 1 301 511 NAG NAG B . F 2 NAG 1 302 512 NAG NAG B . G 3 HOH 1 401 1 HOH HOH A . G 3 HOH 2 402 3 HOH HOH A . G 3 HOH 3 403 4 HOH HOH A . G 3 HOH 4 404 5 HOH HOH A . G 3 HOH 5 405 6 HOH HOH A . G 3 HOH 6 406 7 HOH HOH A . G 3 HOH 7 407 10 HOH HOH A . G 3 HOH 8 408 12 HOH HOH A . G 3 HOH 9 409 14 HOH HOH A . G 3 HOH 10 410 17 HOH HOH A . G 3 HOH 11 411 19 HOH HOH A . G 3 HOH 12 412 24 HOH HOH A . G 3 HOH 13 413 27 HOH HOH A . G 3 HOH 14 414 28 HOH HOH A . G 3 HOH 15 415 29 HOH HOH A . G 3 HOH 16 416 30 HOH HOH A . G 3 HOH 17 417 32 HOH HOH A . G 3 HOH 18 418 33 HOH HOH A . G 3 HOH 19 419 36 HOH HOH A . G 3 HOH 20 420 38 HOH HOH A . G 3 HOH 21 421 40 HOH HOH A . G 3 HOH 22 422 41 HOH HOH A . G 3 HOH 23 423 44 HOH HOH A . G 3 HOH 24 424 46 HOH HOH A . G 3 HOH 25 425 47 HOH HOH A . G 3 HOH 26 426 48 HOH HOH A . G 3 HOH 27 427 51 HOH HOH A . G 3 HOH 28 428 52 HOH HOH A . G 3 HOH 29 429 53 HOH HOH A . G 3 HOH 30 430 55 HOH HOH A . G 3 HOH 31 431 58 HOH HOH A . G 3 HOH 32 432 59 HOH HOH A . G 3 HOH 33 433 60 HOH HOH A . G 3 HOH 34 434 62 HOH HOH A . G 3 HOH 35 435 64 HOH HOH A . G 3 HOH 36 436 66 HOH HOH A . G 3 HOH 37 437 68 HOH HOH A . G 3 HOH 38 438 69 HOH HOH A . G 3 HOH 39 439 72 HOH HOH A . G 3 HOH 40 440 75 HOH HOH A . G 3 HOH 41 441 79 HOH HOH A . G 3 HOH 42 442 80 HOH HOH A . G 3 HOH 43 443 84 HOH HOH A . G 3 HOH 44 444 90 HOH HOH A . G 3 HOH 45 445 91 HOH HOH A . G 3 HOH 46 446 93 HOH HOH A . G 3 HOH 47 447 94 HOH HOH A . G 3 HOH 48 448 95 HOH HOH A . G 3 HOH 49 449 97 HOH HOH A . G 3 HOH 50 450 101 HOH HOH A . G 3 HOH 51 451 102 HOH HOH A . G 3 HOH 52 452 103 HOH HOH A . G 3 HOH 53 453 104 HOH HOH A . G 3 HOH 54 454 105 HOH HOH A . G 3 HOH 55 455 110 HOH HOH A . G 3 HOH 56 456 112 HOH HOH A . G 3 HOH 57 457 115 HOH HOH A . G 3 HOH 58 458 116 HOH HOH A . G 3 HOH 59 459 117 HOH HOH A . G 3 HOH 60 460 121 HOH HOH A . G 3 HOH 61 461 124 HOH HOH A . G 3 HOH 62 462 125 HOH HOH A . G 3 HOH 63 463 129 HOH HOH A . G 3 HOH 64 464 130 HOH HOH A . G 3 HOH 65 465 131 HOH HOH A . G 3 HOH 66 466 132 HOH HOH A . G 3 HOH 67 467 133 HOH HOH A . G 3 HOH 68 468 136 HOH HOH A . G 3 HOH 69 469 139 HOH HOH A . G 3 HOH 70 470 140 HOH HOH A . G 3 HOH 71 471 142 HOH HOH A . G 3 HOH 72 472 145 HOH HOH A . G 3 HOH 73 473 148 HOH HOH A . G 3 HOH 74 474 149 HOH HOH A . G 3 HOH 75 475 155 HOH HOH A . G 3 HOH 76 476 156 HOH HOH A . G 3 HOH 77 477 157 HOH HOH A . G 3 HOH 78 478 160 HOH HOH A . G 3 HOH 79 479 166 HOH HOH A . G 3 HOH 80 480 167 HOH HOH A . G 3 HOH 81 481 169 HOH HOH A . G 3 HOH 82 482 170 HOH HOH A . G 3 HOH 83 483 173 HOH HOH A . G 3 HOH 84 484 177 HOH HOH A . G 3 HOH 85 485 178 HOH HOH A . G 3 HOH 86 486 179 HOH HOH A . G 3 HOH 87 487 180 HOH HOH A . G 3 HOH 88 488 182 HOH HOH A . G 3 HOH 89 489 184 HOH HOH A . G 3 HOH 90 490 187 HOH HOH A . G 3 HOH 91 491 188 HOH HOH A . G 3 HOH 92 492 189 HOH HOH A . G 3 HOH 93 493 191 HOH HOH A . G 3 HOH 94 494 192 HOH HOH A . G 3 HOH 95 495 194 HOH HOH A . G 3 HOH 96 496 195 HOH HOH A . G 3 HOH 97 497 197 HOH HOH A . G 3 HOH 98 498 198 HOH HOH A . G 3 HOH 99 499 202 HOH HOH A . G 3 HOH 100 500 204 HOH HOH A . G 3 HOH 101 501 206 HOH HOH A . G 3 HOH 102 502 211 HOH HOH A . H 3 HOH 1 401 2 HOH HOH B . H 3 HOH 2 402 8 HOH HOH B . H 3 HOH 3 403 9 HOH HOH B . H 3 HOH 4 404 11 HOH HOH B . H 3 HOH 5 405 13 HOH HOH B . H 3 HOH 6 406 15 HOH HOH B . H 3 HOH 7 407 16 HOH HOH B . H 3 HOH 8 408 18 HOH HOH B . H 3 HOH 9 409 20 HOH HOH B . H 3 HOH 10 410 21 HOH HOH B . H 3 HOH 11 411 22 HOH HOH B . H 3 HOH 12 412 23 HOH HOH B . H 3 HOH 13 413 25 HOH HOH B . H 3 HOH 14 414 26 HOH HOH B . H 3 HOH 15 415 31 HOH HOH B . H 3 HOH 16 416 34 HOH HOH B . H 3 HOH 17 417 35 HOH HOH B . H 3 HOH 18 418 37 HOH HOH B . H 3 HOH 19 419 39 HOH HOH B . H 3 HOH 20 420 42 HOH HOH B . H 3 HOH 21 421 43 HOH HOH B . H 3 HOH 22 422 45 HOH HOH B . H 3 HOH 23 423 49 HOH HOH B . H 3 HOH 24 424 50 HOH HOH B . H 3 HOH 25 425 54 HOH HOH B . H 3 HOH 26 426 56 HOH HOH B . H 3 HOH 27 427 57 HOH HOH B . H 3 HOH 28 428 61 HOH HOH B . H 3 HOH 29 429 63 HOH HOH B . H 3 HOH 30 430 65 HOH HOH B . H 3 HOH 31 431 67 HOH HOH B . H 3 HOH 32 432 70 HOH HOH B . H 3 HOH 33 433 71 HOH HOH B . H 3 HOH 34 434 73 HOH HOH B . H 3 HOH 35 435 74 HOH HOH B . H 3 HOH 36 436 76 HOH HOH B . H 3 HOH 37 437 77 HOH HOH B . H 3 HOH 38 438 78 HOH HOH B . H 3 HOH 39 439 81 HOH HOH B . H 3 HOH 40 440 82 HOH HOH B . H 3 HOH 41 441 83 HOH HOH B . H 3 HOH 42 442 85 HOH HOH B . H 3 HOH 43 443 86 HOH HOH B . H 3 HOH 44 444 87 HOH HOH B . H 3 HOH 45 445 88 HOH HOH B . H 3 HOH 46 446 89 HOH HOH B . H 3 HOH 47 447 92 HOH HOH B . H 3 HOH 48 448 96 HOH HOH B . H 3 HOH 49 449 98 HOH HOH B . H 3 HOH 50 450 99 HOH HOH B . H 3 HOH 51 451 100 HOH HOH B . H 3 HOH 52 452 106 HOH HOH B . H 3 HOH 53 453 107 HOH HOH B . H 3 HOH 54 454 108 HOH HOH B . H 3 HOH 55 455 109 HOH HOH B . H 3 HOH 56 456 111 HOH HOH B . H 3 HOH 57 457 113 HOH HOH B . H 3 HOH 58 458 114 HOH HOH B . H 3 HOH 59 459 118 HOH HOH B . H 3 HOH 60 460 119 HOH HOH B . H 3 HOH 61 461 120 HOH HOH B . H 3 HOH 62 462 122 HOH HOH B . H 3 HOH 63 463 123 HOH HOH B . H 3 HOH 64 464 126 HOH HOH B . H 3 HOH 65 465 127 HOH HOH B . H 3 HOH 66 466 128 HOH HOH B . H 3 HOH 67 467 134 HOH HOH B . H 3 HOH 68 468 135 HOH HOH B . H 3 HOH 69 469 137 HOH HOH B . H 3 HOH 70 470 138 HOH HOH B . H 3 HOH 71 471 141 HOH HOH B . H 3 HOH 72 472 143 HOH HOH B . H 3 HOH 73 473 144 HOH HOH B . H 3 HOH 74 474 146 HOH HOH B . H 3 HOH 75 475 147 HOH HOH B . H 3 HOH 76 476 150 HOH HOH B . H 3 HOH 77 477 151 HOH HOH B . H 3 HOH 78 478 152 HOH HOH B . H 3 HOH 79 479 153 HOH HOH B . H 3 HOH 80 480 154 HOH HOH B . H 3 HOH 81 481 158 HOH HOH B . H 3 HOH 82 482 159 HOH HOH B . H 3 HOH 83 483 161 HOH HOH B . H 3 HOH 84 484 162 HOH HOH B . H 3 HOH 85 485 163 HOH HOH B . H 3 HOH 86 486 164 HOH HOH B . H 3 HOH 87 487 165 HOH HOH B . H 3 HOH 88 488 168 HOH HOH B . H 3 HOH 89 489 171 HOH HOH B . H 3 HOH 90 490 172 HOH HOH B . H 3 HOH 91 491 174 HOH HOH B . H 3 HOH 92 492 175 HOH HOH B . H 3 HOH 93 493 176 HOH HOH B . H 3 HOH 94 494 181 HOH HOH B . H 3 HOH 95 495 183 HOH HOH B . H 3 HOH 96 496 185 HOH HOH B . H 3 HOH 97 497 186 HOH HOH B . H 3 HOH 98 498 190 HOH HOH B . H 3 HOH 99 499 193 HOH HOH B . H 3 HOH 100 500 196 HOH HOH B . H 3 HOH 101 501 199 HOH HOH B . H 3 HOH 102 502 200 HOH HOH B . H 3 HOH 103 503 201 HOH HOH B . H 3 HOH 104 504 203 HOH HOH B . H 3 HOH 105 505 205 HOH HOH B . H 3 HOH 106 506 207 HOH HOH B . H 3 HOH 107 507 208 HOH HOH B . H 3 HOH 108 508 209 HOH HOH B . H 3 HOH 109 509 210 HOH HOH B . H 3 HOH 110 510 212 HOH HOH B . H 3 HOH 111 511 213 HOH HOH B . H 3 HOH 112 512 214 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 27 A ASN 95 ? ASN 'GLYCOSYLATION SITE' 2 B ASN 79 B ASN 147 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 79 A ASN 147 ? ASN 'GLYCOSYLATION SITE' 4 B ASN 27 B ASN 95 ? ASN 'GLYCOSYLATION SITE' # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 software_defined_assembly PISA monomeric 1 3 software_defined_assembly PISA monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H 2 1 A,C,D,G 3 1 B,E,F,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-03-11 2 'Structure model' 1 1 2016-01-27 3 'Structure model' 1 2 2018-06-13 4 'Structure model' 1 3 2018-06-20 5 'Structure model' 1 4 2020-07-29 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Data collection' 5 4 'Structure model' 'Database references' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' 'Database references' 8 5 'Structure model' 'Derived calculations' 9 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' entity_src_gen 2 4 'Structure model' citation_author 3 5 'Structure model' chem_comp 4 5 'Structure model' entity 5 5 'Structure model' pdbx_chem_comp_identifier 6 5 'Structure model' pdbx_entity_nonpoly 7 5 'Structure model' struct_conn 8 5 'Structure model' struct_ref_seq_dif 9 5 'Structure model' struct_site 10 5 'Structure model' struct_site_gen # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 2 3 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 3 4 'Structure model' '_citation_author.name' 4 5 'Structure model' '_chem_comp.name' 5 5 'Structure model' '_chem_comp.type' 6 5 'Structure model' '_entity.pdbx_description' 7 5 'Structure model' '_pdbx_entity_nonpoly.name' 8 5 'Structure model' '_struct_conn.pdbx_dist_value' 9 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 10 5 'Structure model' '_struct_conn.pdbx_role' 11 5 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 12 5 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 13 5 'Structure model' '_struct_conn.ptnr1_label_asym_id' 14 5 'Structure model' '_struct_conn.ptnr1_label_seq_id' 15 5 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 16 5 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 17 5 'Structure model' '_struct_conn.ptnr2_label_asym_id' 18 5 'Structure model' '_struct_ref_seq_dif.details' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BALBES phasing . ? 1 REFMAC refinement 5.7.0032 ? 2 MOSFLM 'data reduction' . ? 3 Aimless 'data scaling' . ? 4 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 124 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 124 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 124 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 117.20 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.10 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 GLN A 139 ? ? -59.73 93.45 2 1 ASN A 167 ? ? -94.37 -152.60 3 1 GLN B 83 ? ? 54.02 -122.18 4 1 LYS B 181 ? ? -58.79 172.67 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ILE 69 ? A ILE 1 2 1 Y 1 A THR 193 ? A THR 125 3 1 Y 1 A LYS 194 ? A LYS 126 4 1 Y 1 A HIS 195 ? A HIS 127 5 1 Y 1 A HIS 196 ? A HIS 128 6 1 Y 1 A HIS 197 ? A HIS 129 7 1 Y 1 A HIS 198 ? A HIS 130 8 1 Y 1 A HIS 199 ? A HIS 131 9 1 Y 1 A HIS 200 ? A HIS 132 10 1 Y 1 A HIS 201 ? A HIS 133 11 1 Y 1 A HIS 202 ? A HIS 134 12 1 Y 1 A GLY 203 ? A GLY 135 13 1 Y 1 B ILE 69 ? B ILE 1 14 1 Y 1 B THR 70 ? B THR 2 15 1 Y 1 B GLY 71 ? B GLY 3 16 1 Y 1 B THR 193 ? B THR 125 17 1 Y 1 B LYS 194 ? B LYS 126 18 1 Y 1 B HIS 195 ? B HIS 127 19 1 Y 1 B HIS 196 ? B HIS 128 20 1 Y 1 B HIS 197 ? B HIS 129 21 1 Y 1 B HIS 198 ? B HIS 130 22 1 Y 1 B HIS 199 ? B HIS 131 23 1 Y 1 B HIS 200 ? B HIS 132 24 1 Y 1 B HIS 201 ? B HIS 133 25 1 Y 1 B HIS 202 ? B HIS 134 26 1 Y 1 B GLY 203 ? B GLY 135 # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 3 water HOH #