data_4QL5 # _entry.id 4QL5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QL5 pdb_00004ql5 10.2210/pdb4ql5/pdb RCSB RCSB086192 ? ? WWPDB D_1000086192 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-02 2 'Structure model' 1 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_struct_conn_angle 5 2 'Structure model' struct_conn 6 2 'Structure model' struct_ref_seq_dif 7 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.value' 20 2 'Structure model' '_struct_conn.pdbx_dist_value' 21 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 22 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 23 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 24 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 25 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 26 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 27 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 28 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 29 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 30 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 31 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 32 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 33 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 34 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 35 2 'Structure model' '_struct_ref_seq_dif.details' 36 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 37 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 38 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4QL5 _pdbx_database_status.recvd_initial_deposition_date 2014-06-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id CSGID-IDP06286 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Stogios, P.J.' 1 'Wawrzak, Z.' 2 'Onopriyenko, O.' 3 'Savchenko, A.' 4 'Anderson, W.F.' 5 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _citation.id primary _citation.title 'Crystal structure of translation initiation factor IF-1 from Streptococcus pneumoniae TIGR4' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Stogios, P.J.' 1 ? primary 'Wawrzak, Z.' 2 ? primary 'Onopriyenko, O.' 3 ? primary 'Savchenko, A.' 4 ? primary 'Anderson, W.F.' 5 ? primary 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Translation initiation factor IF-1' 8271.574 2 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 4 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 5 water nat water 18.015 97 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code GMAKDDVIEVEGKVVDTMPNAMFTVELENGHQILATVSGKIRKNYIRILAGDRVTVEMSPYDLTRGRITYRFK _entity_poly.pdbx_seq_one_letter_code_can GMAKDDVIEVEGKVVDTMPNAMFTVELENGHQILATVSGKIRKNYIRILAGDRVTVEMSPYDLTRGRITYRFK _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier CSGID-IDP06286 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 GLYCEROL GOL 4 'ACETATE ION' ACT 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MET n 1 3 ALA n 1 4 LYS n 1 5 ASP n 1 6 ASP n 1 7 VAL n 1 8 ILE n 1 9 GLU n 1 10 VAL n 1 11 GLU n 1 12 GLY n 1 13 LYS n 1 14 VAL n 1 15 VAL n 1 16 ASP n 1 17 THR n 1 18 MET n 1 19 PRO n 1 20 ASN n 1 21 ALA n 1 22 MET n 1 23 PHE n 1 24 THR n 1 25 VAL n 1 26 GLU n 1 27 LEU n 1 28 GLU n 1 29 ASN n 1 30 GLY n 1 31 HIS n 1 32 GLN n 1 33 ILE n 1 34 LEU n 1 35 ALA n 1 36 THR n 1 37 VAL n 1 38 SER n 1 39 GLY n 1 40 LYS n 1 41 ILE n 1 42 ARG n 1 43 LYS n 1 44 ASN n 1 45 TYR n 1 46 ILE n 1 47 ARG n 1 48 ILE n 1 49 LEU n 1 50 ALA n 1 51 GLY n 1 52 ASP n 1 53 ARG n 1 54 VAL n 1 55 THR n 1 56 VAL n 1 57 GLU n 1 58 MET n 1 59 SER n 1 60 PRO n 1 61 TYR n 1 62 ASP n 1 63 LEU n 1 64 THR n 1 65 ARG n 1 66 GLY n 1 67 ARG n 1 68 ILE n 1 69 THR n 1 70 TYR n 1 71 ARG n 1 72 PHE n 1 73 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'infA, S1_IF1, SP_0232' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain TIGR4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus pneumoniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 170187 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG53 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MET 2 1 ? ? ? A . n A 1 3 ALA 3 2 ? ? ? A . n A 1 4 LYS 4 3 ? ? ? A . n A 1 5 ASP 5 4 ? ? ? A . n A 1 6 ASP 6 5 5 ASP ASP A . n A 1 7 VAL 7 6 6 VAL VAL A . n A 1 8 ILE 8 7 7 ILE ILE A . n A 1 9 GLU 9 8 8 GLU GLU A . n A 1 10 VAL 10 9 9 VAL VAL A . n A 1 11 GLU 11 10 10 GLU GLU A . n A 1 12 GLY 12 11 11 GLY GLY A . n A 1 13 LYS 13 12 12 LYS LYS A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 VAL 15 14 14 VAL VAL A . n A 1 16 ASP 16 15 15 ASP ASP A . n A 1 17 THR 17 16 16 THR THR A . n A 1 18 MET 18 17 17 MET MET A . n A 1 19 PRO 19 18 18 PRO PRO A . n A 1 20 ASN 20 19 19 ASN ASN A . n A 1 21 ALA 21 20 20 ALA ALA A . n A 1 22 MET 22 21 21 MET MET A . n A 1 23 PHE 23 22 22 PHE PHE A . n A 1 24 THR 24 23 23 THR THR A . n A 1 25 VAL 25 24 24 VAL VAL A . n A 1 26 GLU 26 25 25 GLU GLU A . n A 1 27 LEU 27 26 26 LEU LEU A . n A 1 28 GLU 28 27 27 GLU GLU A . n A 1 29 ASN 29 28 28 ASN ASN A . n A 1 30 GLY 30 29 29 GLY GLY A . n A 1 31 HIS 31 30 30 HIS HIS A . n A 1 32 GLN 32 31 31 GLN GLN A . n A 1 33 ILE 33 32 32 ILE ILE A . n A 1 34 LEU 34 33 33 LEU LEU A . n A 1 35 ALA 35 34 34 ALA ALA A . n A 1 36 THR 36 35 35 THR THR A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 SER 38 37 37 SER SER A . n A 1 39 GLY 39 38 38 GLY GLY A . n A 1 40 LYS 40 39 39 LYS LYS A . n A 1 41 ILE 41 40 40 ILE ILE A . n A 1 42 ARG 42 41 41 ARG ARG A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 ASN 44 43 43 ASN ASN A . n A 1 45 TYR 45 44 44 TYR TYR A . n A 1 46 ILE 46 45 45 ILE ILE A . n A 1 47 ARG 47 46 46 ARG ARG A . n A 1 48 ILE 48 47 47 ILE ILE A . n A 1 49 LEU 49 48 48 LEU LEU A . n A 1 50 ALA 50 49 49 ALA ALA A . n A 1 51 GLY 51 50 50 GLY GLY A . n A 1 52 ASP 52 51 51 ASP ASP A . n A 1 53 ARG 53 52 52 ARG ARG A . n A 1 54 VAL 54 53 53 VAL VAL A . n A 1 55 THR 55 54 54 THR THR A . n A 1 56 VAL 56 55 55 VAL VAL A . n A 1 57 GLU 57 56 56 GLU GLU A . n A 1 58 MET 58 57 57 MET MET A . n A 1 59 SER 59 58 58 SER SER A . n A 1 60 PRO 60 59 59 PRO PRO A . n A 1 61 TYR 61 60 60 TYR TYR A . n A 1 62 ASP 62 61 61 ASP ASP A . n A 1 63 LEU 63 62 62 LEU LEU A . n A 1 64 THR 64 63 63 THR THR A . n A 1 65 ARG 65 64 64 ARG ARG A . n A 1 66 GLY 66 65 65 GLY GLY A . n A 1 67 ARG 67 66 66 ARG ARG A . n A 1 68 ILE 68 67 67 ILE ILE A . n A 1 69 THR 69 68 68 THR THR A . n A 1 70 TYR 70 69 69 TYR TYR A . n A 1 71 ARG 71 70 70 ARG ARG A . n A 1 72 PHE 72 71 71 PHE PHE A . n A 1 73 LYS 73 72 72 LYS LYS A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MET 2 1 ? ? ? B . n B 1 3 ALA 3 2 ? ? ? B . n B 1 4 LYS 4 3 ? ? ? B . n B 1 5 ASP 5 4 ? ? ? B . n B 1 6 ASP 6 5 ? ? ? B . n B 1 7 VAL 7 6 ? ? ? B . n B 1 8 ILE 8 7 7 ILE ILE B . n B 1 9 GLU 9 8 8 GLU GLU B . n B 1 10 VAL 10 9 9 VAL VAL B . n B 1 11 GLU 11 10 10 GLU GLU B . n B 1 12 GLY 12 11 11 GLY GLY B . n B 1 13 LYS 13 12 12 LYS LYS B . n B 1 14 VAL 14 13 13 VAL VAL B . n B 1 15 VAL 15 14 14 VAL VAL B . n B 1 16 ASP 16 15 15 ASP ASP B . n B 1 17 THR 17 16 16 THR THR B . n B 1 18 MET 18 17 17 MET MET B . n B 1 19 PRO 19 18 18 PRO PRO B . n B 1 20 ASN 20 19 19 ASN ASN B . n B 1 21 ALA 21 20 20 ALA ALA B . n B 1 22 MET 22 21 21 MET MET B . n B 1 23 PHE 23 22 22 PHE PHE B . n B 1 24 THR 24 23 23 THR THR B . n B 1 25 VAL 25 24 24 VAL VAL B . n B 1 26 GLU 26 25 25 GLU GLU B . n B 1 27 LEU 27 26 26 LEU LEU B . n B 1 28 GLU 28 27 27 GLU GLU B . n B 1 29 ASN 29 28 28 ASN ASN B . n B 1 30 GLY 30 29 29 GLY GLY B . n B 1 31 HIS 31 30 30 HIS HIS B . n B 1 32 GLN 32 31 31 GLN GLN B . n B 1 33 ILE 33 32 32 ILE ILE B . n B 1 34 LEU 34 33 33 LEU LEU B . n B 1 35 ALA 35 34 34 ALA ALA B . n B 1 36 THR 36 35 35 THR THR B . n B 1 37 VAL 37 36 36 VAL VAL B . n B 1 38 SER 38 37 37 SER SER B . n B 1 39 GLY 39 38 38 GLY GLY B . n B 1 40 LYS 40 39 39 LYS LYS B . n B 1 41 ILE 41 40 40 ILE ILE B . n B 1 42 ARG 42 41 41 ARG ARG B . n B 1 43 LYS 43 42 42 LYS LYS B . n B 1 44 ASN 44 43 43 ASN ASN B . n B 1 45 TYR 45 44 44 TYR TYR B . n B 1 46 ILE 46 45 45 ILE ILE B . n B 1 47 ARG 47 46 46 ARG ARG B . n B 1 48 ILE 48 47 47 ILE ILE B . n B 1 49 LEU 49 48 48 LEU LEU B . n B 1 50 ALA 50 49 49 ALA ALA B . n B 1 51 GLY 51 50 50 GLY GLY B . n B 1 52 ASP 52 51 51 ASP ASP B . n B 1 53 ARG 53 52 52 ARG ARG B . n B 1 54 VAL 54 53 53 VAL VAL B . n B 1 55 THR 55 54 54 THR THR B . n B 1 56 VAL 56 55 55 VAL VAL B . n B 1 57 GLU 57 56 56 GLU GLU B . n B 1 58 MET 58 57 57 MET MET B . n B 1 59 SER 59 58 58 SER SER B . n B 1 60 PRO 60 59 59 PRO PRO B . n B 1 61 TYR 61 60 60 TYR TYR B . n B 1 62 ASP 62 61 61 ASP ASP B . n B 1 63 LEU 63 62 62 LEU LEU B . n B 1 64 THR 64 63 63 THR THR B . n B 1 65 ARG 65 64 64 ARG ARG B . n B 1 66 GLY 66 65 65 GLY GLY B . n B 1 67 ARG 67 66 66 ARG ARG B . n B 1 68 ILE 68 67 67 ILE ILE B . n B 1 69 THR 69 68 68 THR THR B . n B 1 70 TYR 70 69 69 TYR TYR B . n B 1 71 ARG 71 70 70 ARG ARG B . n B 1 72 PHE 72 71 71 PHE PHE B . n B 1 73 LYS 73 72 72 LYS LYS B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 ZN 1 101 4 ZN ZN A . D 2 ZN 1 101 3 ZN ZN B . E 3 GOL 1 102 1 GOL GOL B . F 4 ACT 1 103 2 ACT ACT B . G 5 HOH 1 201 1 HOH HOH A . G 5 HOH 2 202 2 HOH HOH A . G 5 HOH 3 203 3 HOH HOH A . G 5 HOH 4 204 5 HOH HOH A . G 5 HOH 5 205 6 HOH HOH A . G 5 HOH 6 206 9 HOH HOH A . G 5 HOH 7 207 14 HOH HOH A . G 5 HOH 8 208 18 HOH HOH A . G 5 HOH 9 209 24 HOH HOH A . G 5 HOH 10 210 25 HOH HOH A . G 5 HOH 11 211 26 HOH HOH A . G 5 HOH 12 212 27 HOH HOH A . G 5 HOH 13 213 30 HOH HOH A . G 5 HOH 14 214 33 HOH HOH A . G 5 HOH 15 215 35 HOH HOH A . G 5 HOH 16 216 36 HOH HOH A . G 5 HOH 17 217 40 HOH HOH A . G 5 HOH 18 218 43 HOH HOH A . G 5 HOH 19 219 49 HOH HOH A . G 5 HOH 20 220 50 HOH HOH A . G 5 HOH 21 221 53 HOH HOH A . G 5 HOH 22 222 55 HOH HOH A . G 5 HOH 23 223 64 HOH HOH A . G 5 HOH 24 224 66 HOH HOH A . G 5 HOH 25 225 67 HOH HOH A . G 5 HOH 26 226 68 HOH HOH A . G 5 HOH 27 227 73 HOH HOH A . G 5 HOH 28 228 87 HOH HOH A . G 5 HOH 29 229 88 HOH HOH A . G 5 HOH 30 230 99 HOH HOH A . G 5 HOH 31 231 100 HOH HOH A . G 5 HOH 32 232 104 HOH HOH A . G 5 HOH 33 233 106 HOH HOH A . G 5 HOH 34 234 109 HOH HOH A . G 5 HOH 35 235 112 HOH HOH A . G 5 HOH 36 236 120 HOH HOH A . G 5 HOH 37 237 121 HOH HOH A . H 5 HOH 1 201 4 HOH HOH B . H 5 HOH 2 202 7 HOH HOH B . H 5 HOH 3 203 8 HOH HOH B . H 5 HOH 4 204 11 HOH HOH B . H 5 HOH 5 205 12 HOH HOH B . H 5 HOH 6 206 13 HOH HOH B . H 5 HOH 7 207 15 HOH HOH B . H 5 HOH 8 208 16 HOH HOH B . H 5 HOH 9 209 19 HOH HOH B . H 5 HOH 10 210 21 HOH HOH B . H 5 HOH 11 211 22 HOH HOH B . H 5 HOH 12 212 23 HOH HOH B . H 5 HOH 13 213 28 HOH HOH B . H 5 HOH 14 214 29 HOH HOH B . H 5 HOH 15 215 31 HOH HOH B . H 5 HOH 16 216 32 HOH HOH B . H 5 HOH 17 217 34 HOH HOH B . H 5 HOH 18 218 37 HOH HOH B . H 5 HOH 19 219 38 HOH HOH B . H 5 HOH 20 220 39 HOH HOH B . H 5 HOH 21 221 41 HOH HOH B . H 5 HOH 22 222 42 HOH HOH B . H 5 HOH 23 223 44 HOH HOH B . H 5 HOH 24 224 46 HOH HOH B . H 5 HOH 25 225 48 HOH HOH B . H 5 HOH 26 226 51 HOH HOH B . H 5 HOH 27 227 52 HOH HOH B . H 5 HOH 28 228 56 HOH HOH B . H 5 HOH 29 229 58 HOH HOH B . H 5 HOH 30 230 59 HOH HOH B . H 5 HOH 31 231 60 HOH HOH B . H 5 HOH 32 232 61 HOH HOH B . H 5 HOH 33 233 62 HOH HOH B . H 5 HOH 34 234 72 HOH HOH B . H 5 HOH 35 235 74 HOH HOH B . H 5 HOH 36 236 75 HOH HOH B . H 5 HOH 37 237 76 HOH HOH B . H 5 HOH 38 238 77 HOH HOH B . H 5 HOH 39 239 78 HOH HOH B . H 5 HOH 40 240 81 HOH HOH B . H 5 HOH 41 241 82 HOH HOH B . H 5 HOH 42 242 84 HOH HOH B . H 5 HOH 43 243 90 HOH HOH B . H 5 HOH 44 244 91 HOH HOH B . H 5 HOH 45 245 92 HOH HOH B . H 5 HOH 46 246 93 HOH HOH B . H 5 HOH 47 247 95 HOH HOH B . H 5 HOH 48 248 96 HOH HOH B . H 5 HOH 49 249 103 HOH HOH B . H 5 HOH 50 250 107 HOH HOH B . H 5 HOH 51 251 108 HOH HOH B . H 5 HOH 52 252 115 HOH HOH B . H 5 HOH 53 253 116 HOH HOH B . H 5 HOH 54 254 117 HOH HOH B . H 5 HOH 55 255 122 HOH HOH B . H 5 HOH 56 256 123 HOH HOH B . H 5 HOH 57 257 124 HOH HOH B . H 5 HOH 58 258 125 HOH HOH B . H 5 HOH 59 259 126 HOH HOH B . H 5 HOH 60 260 127 HOH HOH B . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 PHENIX 'model building' '(phenix.autsol)' ? 2 PHENIX refinement '(phenix.refine: 1.9_1692)' ? 3 XDS 'data reduction' . ? 4 Aimless 'data scaling' . ? 5 PHENIX phasing . ? 6 # _cell.entry_id 4QL5 _cell.length_a 83.636 _cell.length_b 83.636 _cell.length_c 50.575 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QL5 _symmetry.space_group_name_H-M 'P 41 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 92 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4QL5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.67 _exptl_crystal.density_percent_sol 53.99 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details ;20% polyethylene glycol (PEG) 3350 (w/v), 0.05 M zinc acetate dihydrate, cryoprotectant paratone oil, pH 7, VAPOR DIFFUSION, SITTING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2014-06-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator GRAPHITE _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.12720 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.12720 # _reflns.entry_id 4QL5 _reflns.observed_criterion_sigma_I -2 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 19.323 _reflns.d_resolution_high 2.02 _reflns.number_obs 12161 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.054 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.4 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.1 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.02 _reflns_shell.d_res_low 2.22 _reflns_shell.percent_possible_all 99.6 _reflns_shell.Rmerge_I_obs 0.478 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.4 _reflns_shell.pdbx_redundancy 7.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2827 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4QL5 _refine.ls_number_reflns_obs ? _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.323 _refine.ls_d_res_high 2.025 _refine.ls_percent_reflns_obs 99.84 _refine.ls_R_factor_obs 0.1895 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1885 _refine.ls_R_factor_R_free 0.2091 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.81 _refine.ls_number_reflns_R_free 1071 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.25 _refine.pdbx_overall_phase_error 22.39 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1071 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 97 _refine_hist.number_atoms_total 1180 _refine_hist.d_res_high 2.025 _refine_hist.d_res_low 19.323 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 1120 ? 'X-RAY DIFFRACTION' f_angle_d 1.110 ? ? 1508 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.128 ? ? 440 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.032 ? ? 174 ? 'X-RAY DIFFRACTION' f_plane_restr 0.005 ? ? 192 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.0247 2.1167 2609 0.2840 99.00 0.2956 . . 149 . . . . 'X-RAY DIFFRACTION' . 2.1167 2.2282 2665 0.2574 100.00 0.2558 . . 124 . . . . 'X-RAY DIFFRACTION' . 2.2282 2.3676 2643 0.2346 100.00 0.2842 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.3676 2.5500 2656 0.2450 100.00 0.2836 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.5500 2.8059 2666 0.2427 100.00 0.2774 . . 127 . . . . 'X-RAY DIFFRACTION' . 2.8059 3.2103 2649 0.2044 100.00 0.1962 . . 143 . . . . 'X-RAY DIFFRACTION' . 3.2103 4.0386 2656 0.1764 100.00 0.2157 . . 121 . . . . 'X-RAY DIFFRACTION' . 4.0386 19.3236 2652 0.1411 100.00 0.1578 . . 139 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4QL5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4QL5 _struct.title 'Crystal structure of translation initiation factor IF-1 from Streptococcus pneumoniae TIGR4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QL5 _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text ;translation initiation factor, PROTEIN BIOSYNTHESIS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND INFECTIOUS DISEASES, CSGID, CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, STRUCTURAL GENOMICS, BETA BARREL, OB FOLD, TRANSLATION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code IF1_STRPN _struct_ref.pdbx_db_accession P65121 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MAKDDVIEVEGKVVDTMPNAMFTVELENGHQILATVSGKIRKNYIRILAGDRVTVEMSPYDLTRGRITYRFK _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4QL5 A 2 ? 73 ? P65121 1 ? 72 ? 1 72 2 1 4QL5 B 2 ? 73 ? P65121 1 ? 72 ? 1 72 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QL5 GLY A 1 ? UNP P65121 ? ? 'expression tag' 0 1 2 4QL5 GLY B 1 ? UNP P65121 ? ? 'expression tag' 0 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4110 ? 1 MORE -158 ? 1 'SSA (A^2)' 16300 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_666 -y+1,-x+1,-z+3/2 0.0000000000 -1.0000000000 0.0000000000 83.6360000000 -1.0000000000 0.0000000000 0.0000000000 83.6360000000 0.0000000000 0.0000000000 -1.0000000000 75.8625000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 38 ? LYS A 43 ? SER A 37 LYS A 42 1 ? 6 HELX_P HELX_P2 2 SER B 38 ? ASN B 44 ? SER B 37 ASN B 43 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A GLU 9 OE1 ? ? ? 1_555 D ZN . ZN ? ? A GLU 8 B ZN 101 1_555 ? ? ? ? ? ? ? 2.033 ? ? metalc2 metalc ? ? A GLU 11 OE2 ? ? ? 1_555 C ZN . ZN ? ? A GLU 10 A ZN 101 1_555 ? ? ? ? ? ? ? 1.939 ? ? metalc3 metalc ? ? A GLU 11 OE1 ? ? ? 1_555 C ZN . ZN ? ? A GLU 10 A ZN 101 1_555 ? ? ? ? ? ? ? 2.562 ? ? metalc4 metalc ? ? C ZN . ZN ? ? ? 1_555 G HOH . O ? ? A ZN 101 A HOH 220 1_555 ? ? ? ? ? ? ? 2.163 ? ? metalc5 metalc ? ? C ZN . ZN ? ? ? 1_555 B HIS 31 NE2 ? ? A ZN 101 B HIS 30 1_555 ? ? ? ? ? ? ? 2.016 ? ? metalc6 metalc ? ? B GLU 26 OE2 ? ? ? 1_555 D ZN . ZN ? ? B GLU 25 B ZN 101 1_555 ? ? ? ? ? ? ? 2.006 ? ? metalc7 metalc ? ? B GLY 30 O ? ? ? 1_555 D ZN . ZN ? ? B GLY 29 B ZN 101 1_555 ? ? ? ? ? ? ? 2.029 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OE1 ? A GLU 9 ? A GLU 8 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 OE2 ? B GLU 26 ? B GLU 25 ? 1_555 114.3 ? 2 OE1 ? A GLU 9 ? A GLU 8 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? B GLY 30 ? B GLY 29 ? 1_555 104.5 ? 3 OE2 ? B GLU 26 ? B GLU 25 ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? B GLY 30 ? B GLY 29 ? 1_555 96.1 ? 4 OE2 ? A GLU 11 ? A GLU 10 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 OE1 ? A GLU 11 ? A GLU 10 ? 1_555 56.4 ? 5 OE2 ? A GLU 11 ? A GLU 10 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 220 ? 1_555 109.8 ? 6 OE1 ? A GLU 11 ? A GLU 10 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 220 ? 1_555 87.6 ? 7 OE2 ? A GLU 11 ? A GLU 10 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 NE2 ? B HIS 31 ? B HIS 30 ? 1_555 102.3 ? 8 OE1 ? A GLU 11 ? A GLU 10 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 NE2 ? B HIS 31 ? B HIS 30 ? 1_555 158.6 ? 9 O ? G HOH . ? A HOH 220 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 NE2 ? B HIS 31 ? B HIS 30 ? 1_555 103.5 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 8 ? THR A 17 ? ILE A 7 THR A 16 A 2 PHE A 23 ? LEU A 27 ? PHE A 22 LEU A 26 A 3 GLN A 32 ? VAL A 37 ? GLN A 31 VAL A 36 A 4 ARG A 65 ? ARG A 71 ? ARG A 64 ARG A 70 A 5 ARG A 53 ? MET A 58 ? ARG A 52 MET A 57 A 6 ILE A 8 ? THR A 17 ? ILE A 7 THR A 16 B 1 GLU B 9 ? MET B 18 ? GLU B 8 MET B 17 B 2 MET B 22 ? LEU B 27 ? MET B 21 LEU B 26 B 3 GLN B 32 ? VAL B 37 ? GLN B 31 VAL B 36 B 4 ARG B 65 ? ARG B 71 ? ARG B 64 ARG B 70 B 5 ARG B 53 ? MET B 58 ? ARG B 52 MET B 57 B 6 GLU B 9 ? MET B 18 ? GLU B 8 MET B 17 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 15 ? N VAL A 14 O THR A 24 ? O THR A 23 A 2 3 N PHE A 23 ? N PHE A 22 O ALA A 35 ? O ALA A 34 A 3 4 N THR A 36 ? N THR A 35 O ILE A 68 ? O ILE A 67 A 4 5 O ARG A 67 ? O ARG A 66 N GLU A 57 ? N GLU A 56 A 5 6 O VAL A 56 ? O VAL A 55 N VAL A 10 ? N VAL A 9 B 1 2 N VAL B 15 ? N VAL B 14 O THR B 24 ? O THR B 23 B 2 3 N PHE B 23 ? N PHE B 22 O ALA B 35 ? O ALA B 34 B 3 4 N THR B 36 ? N THR B 35 O ILE B 68 ? O ILE B 67 B 4 5 O ARG B 67 ? O ARG B 66 N GLU B 57 ? N GLU B 56 B 5 6 O VAL B 54 ? O VAL B 53 N GLY B 12 ? N GLY B 11 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A ZN 101 ? 4 'BINDING SITE FOR RESIDUE ZN A 101' AC2 Software B ZN 101 ? 4 'BINDING SITE FOR RESIDUE ZN B 101' AC3 Software B GOL 102 ? 2 'BINDING SITE FOR RESIDUE GOL B 102' AC4 Software B ACT 103 ? 4 'BINDING SITE FOR RESIDUE ACT B 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 GLU A 11 ? GLU A 10 . ? 1_555 ? 2 AC1 4 GLU A 28 ? GLU A 27 . ? 8_666 ? 3 AC1 4 HOH G . ? HOH A 220 . ? 1_555 ? 4 AC1 4 HIS B 31 ? HIS B 30 . ? 1_555 ? 5 AC2 4 GLU A 9 ? GLU A 8 . ? 1_555 ? 6 AC2 4 HIS A 31 ? HIS A 30 . ? 8_666 ? 7 AC2 4 GLU B 26 ? GLU B 25 . ? 1_555 ? 8 AC2 4 GLY B 30 ? GLY B 29 . ? 1_555 ? 9 AC3 2 ASP B 16 ? ASP B 15 . ? 1_555 ? 10 AC3 2 HOH H . ? HOH B 246 . ? 1_555 ? 11 AC4 4 GLU A 26 ? GLU A 25 . ? 8_666 ? 12 AC4 4 ASP B 62 ? ASP B 61 . ? 1_555 ? 13 AC4 4 THR B 64 ? THR B 63 . ? 1_555 ? 14 AC4 4 ARG B 65 ? ARG B 64 . ? 1_555 ? # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CA _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 52 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 A _pdbx_validate_rmsd_angle.auth_atom_id_2 C _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 52 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 O _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 52 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 134.33 _pdbx_validate_rmsd_angle.angle_target_value 120.10 _pdbx_validate_rmsd_angle.angle_deviation 14.23 _pdbx_validate_rmsd_angle.angle_standard_deviation 2.10 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 17 ? ? -116.03 -163.31 2 1 PRO A 18 ? ? -58.02 -102.81 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 228 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id G _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 48.5328 37.2833 32.5459 0.7221 0.4408 0.5385 0.0336 -0.0063 0.0555 6.8632 5.4503 2.6391 -5.8577 -0.5067 -0.6484 -0.2640 0.3912 1.8898 1.7758 0.0677 -1.2845 -1.2437 -0.7733 0.1320 'X-RAY DIFFRACTION' 2 ? refined 43.7592 26.7815 27.0601 0.5556 0.4980 0.3958 -0.1381 -0.0476 0.0997 0.5063 1.4310 5.5056 -0.7752 0.8693 -0.3107 0.2809 -0.0449 -0.1144 -0.4357 0.3199 0.3983 0.4900 -0.8653 -0.6236 'X-RAY DIFFRACTION' 3 ? refined 44.7020 31.9941 28.7475 0.4606 0.6150 0.3669 0.0251 -0.0924 0.0337 4.0550 8.8664 5.9936 -0.5816 -0.4735 1.5393 -0.3959 -0.7181 0.5739 -0.2093 0.6461 0.5188 -0.0107 -0.5574 -0.2161 'X-RAY DIFFRACTION' 4 ? refined 61.3376 42.4841 22.5075 0.3804 0.2811 0.3716 0.0127 0.0556 0.0307 3.0509 2.8808 8.1775 1.4262 3.1908 -0.6586 0.5134 0.0301 0.5207 -0.0999 -0.6268 0.2746 -0.1888 -0.1168 0.0769 'X-RAY DIFFRACTION' 5 ? refined 66.1738 43.7227 21.0946 0.3022 0.2366 0.2879 -0.0199 -0.0338 0.0254 9.0086 6.9365 4.9064 2.2237 -2.2417 -1.1484 0.2449 -0.0059 0.4885 -0.1593 -0.1198 -0.3092 -0.2507 0.3297 -0.0925 'X-RAY DIFFRACTION' 6 ? refined 67.7389 37.4649 22.3665 0.2655 0.4332 0.3306 -0.0023 0.0008 0.0834 4.2835 9.4096 3.1377 -2.4628 -0.4246 -0.9765 -0.3402 -0.1404 0.1001 0.2767 -0.0834 -0.3652 -0.0789 0.8449 0.4790 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '(chain A and resid 5:10)' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '(chain A and resid 11:59)' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '(chain A and resid 60:72)' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '(chain B and resid 8:17)' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '(chain B and resid 18:55)' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '(chain B and resid 56:72)' # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A MET 1 ? A MET 2 3 1 Y 1 A ALA 2 ? A ALA 3 4 1 Y 1 A LYS 3 ? A LYS 4 5 1 Y 1 A ASP 4 ? A ASP 5 6 1 Y 1 B GLY 0 ? B GLY 1 7 1 Y 1 B MET 1 ? B MET 2 8 1 Y 1 B ALA 2 ? B ALA 3 9 1 Y 1 B LYS 3 ? B LYS 4 10 1 Y 1 B ASP 4 ? B ASP 5 11 1 Y 1 B ASP 5 ? B ASP 6 12 1 Y 1 B VAL 6 ? B VAL 7 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 GLN N N N N 81 GLN CA C N S 82 GLN C C N N 83 GLN O O N N 84 GLN CB C N N 85 GLN CG C N N 86 GLN CD C N N 87 GLN OE1 O N N 88 GLN NE2 N N N 89 GLN OXT O N N 90 GLN H H N N 91 GLN H2 H N N 92 GLN HA H N N 93 GLN HB2 H N N 94 GLN HB3 H N N 95 GLN HG2 H N N 96 GLN HG3 H N N 97 GLN HE21 H N N 98 GLN HE22 H N N 99 GLN HXT H N N 100 GLU N N N N 101 GLU CA C N S 102 GLU C C N N 103 GLU O O N N 104 GLU CB C N N 105 GLU CG C N N 106 GLU CD C N N 107 GLU OE1 O N N 108 GLU OE2 O N N 109 GLU OXT O N N 110 GLU H H N N 111 GLU H2 H N N 112 GLU HA H N N 113 GLU HB2 H N N 114 GLU HB3 H N N 115 GLU HG2 H N N 116 GLU HG3 H N N 117 GLU HE2 H N N 118 GLU HXT H N N 119 GLY N N N N 120 GLY CA C N N 121 GLY C C N N 122 GLY O O N N 123 GLY OXT O N N 124 GLY H H N N 125 GLY H2 H N N 126 GLY HA2 H N N 127 GLY HA3 H N N 128 GLY HXT H N N 129 GOL C1 C N N 130 GOL O1 O N N 131 GOL C2 C N N 132 GOL O2 O N N 133 GOL C3 C N N 134 GOL O3 O N N 135 GOL H11 H N N 136 GOL H12 H N N 137 GOL HO1 H N N 138 GOL H2 H N N 139 GOL HO2 H N N 140 GOL H31 H N N 141 GOL H32 H N N 142 GOL HO3 H N N 143 HIS N N N N 144 HIS CA C N S 145 HIS C C N N 146 HIS O O N N 147 HIS CB C N N 148 HIS CG C Y N 149 HIS ND1 N Y N 150 HIS CD2 C Y N 151 HIS CE1 C Y N 152 HIS NE2 N Y N 153 HIS OXT O N N 154 HIS H H N N 155 HIS H2 H N N 156 HIS HA H N N 157 HIS HB2 H N N 158 HIS HB3 H N N 159 HIS HD1 H N N 160 HIS HD2 H N N 161 HIS HE1 H N N 162 HIS HE2 H N N 163 HIS HXT H N N 164 HOH O O N N 165 HOH H1 H N N 166 HOH H2 H N N 167 ILE N N N N 168 ILE CA C N S 169 ILE C C N N 170 ILE O O N N 171 ILE CB C N S 172 ILE CG1 C N N 173 ILE CG2 C N N 174 ILE CD1 C N N 175 ILE OXT O N N 176 ILE H H N N 177 ILE H2 H N N 178 ILE HA H N N 179 ILE HB H N N 180 ILE HG12 H N N 181 ILE HG13 H N N 182 ILE HG21 H N N 183 ILE HG22 H N N 184 ILE HG23 H N N 185 ILE HD11 H N N 186 ILE HD12 H N N 187 ILE HD13 H N N 188 ILE HXT H N N 189 LEU N N N N 190 LEU CA C N S 191 LEU C C N N 192 LEU O O N N 193 LEU CB C N N 194 LEU CG C N N 195 LEU CD1 C N N 196 LEU CD2 C N N 197 LEU OXT O N N 198 LEU H H N N 199 LEU H2 H N N 200 LEU HA H N N 201 LEU HB2 H N N 202 LEU HB3 H N N 203 LEU HG H N N 204 LEU HD11 H N N 205 LEU HD12 H N N 206 LEU HD13 H N N 207 LEU HD21 H N N 208 LEU HD22 H N N 209 LEU HD23 H N N 210 LEU HXT H N N 211 LYS N N N N 212 LYS CA C N S 213 LYS C C N N 214 LYS O O N N 215 LYS CB C N N 216 LYS CG C N N 217 LYS CD C N N 218 LYS CE C N N 219 LYS NZ N N N 220 LYS OXT O N N 221 LYS H H N N 222 LYS H2 H N N 223 LYS HA H N N 224 LYS HB2 H N N 225 LYS HB3 H N N 226 LYS HG2 H N N 227 LYS HG3 H N N 228 LYS HD2 H N N 229 LYS HD3 H N N 230 LYS HE2 H N N 231 LYS HE3 H N N 232 LYS HZ1 H N N 233 LYS HZ2 H N N 234 LYS HZ3 H N N 235 LYS HXT H N N 236 MET N N N N 237 MET CA C N S 238 MET C C N N 239 MET O O N N 240 MET CB C N N 241 MET CG C N N 242 MET SD S N N 243 MET CE C N N 244 MET OXT O N N 245 MET H H N N 246 MET H2 H N N 247 MET HA H N N 248 MET HB2 H N N 249 MET HB3 H N N 250 MET HG2 H N N 251 MET HG3 H N N 252 MET HE1 H N N 253 MET HE2 H N N 254 MET HE3 H N N 255 MET HXT H N N 256 PHE N N N N 257 PHE CA C N S 258 PHE C C N N 259 PHE O O N N 260 PHE CB C N N 261 PHE CG C Y N 262 PHE CD1 C Y N 263 PHE CD2 C Y N 264 PHE CE1 C Y N 265 PHE CE2 C Y N 266 PHE CZ C Y N 267 PHE OXT O N N 268 PHE H H N N 269 PHE H2 H N N 270 PHE HA H N N 271 PHE HB2 H N N 272 PHE HB3 H N N 273 PHE HD1 H N N 274 PHE HD2 H N N 275 PHE HE1 H N N 276 PHE HE2 H N N 277 PHE HZ H N N 278 PHE HXT H N N 279 PRO N N N N 280 PRO CA C N S 281 PRO C C N N 282 PRO O O N N 283 PRO CB C N N 284 PRO CG C N N 285 PRO CD C N N 286 PRO OXT O N N 287 PRO H H N N 288 PRO HA H N N 289 PRO HB2 H N N 290 PRO HB3 H N N 291 PRO HG2 H N N 292 PRO HG3 H N N 293 PRO HD2 H N N 294 PRO HD3 H N N 295 PRO HXT H N N 296 SER N N N N 297 SER CA C N S 298 SER C C N N 299 SER O O N N 300 SER CB C N N 301 SER OG O N N 302 SER OXT O N N 303 SER H H N N 304 SER H2 H N N 305 SER HA H N N 306 SER HB2 H N N 307 SER HB3 H N N 308 SER HG H N N 309 SER HXT H N N 310 THR N N N N 311 THR CA C N S 312 THR C C N N 313 THR O O N N 314 THR CB C N R 315 THR OG1 O N N 316 THR CG2 C N N 317 THR OXT O N N 318 THR H H N N 319 THR H2 H N N 320 THR HA H N N 321 THR HB H N N 322 THR HG1 H N N 323 THR HG21 H N N 324 THR HG22 H N N 325 THR HG23 H N N 326 THR HXT H N N 327 TYR N N N N 328 TYR CA C N S 329 TYR C C N N 330 TYR O O N N 331 TYR CB C N N 332 TYR CG C Y N 333 TYR CD1 C Y N 334 TYR CD2 C Y N 335 TYR CE1 C Y N 336 TYR CE2 C Y N 337 TYR CZ C Y N 338 TYR OH O N N 339 TYR OXT O N N 340 TYR H H N N 341 TYR H2 H N N 342 TYR HA H N N 343 TYR HB2 H N N 344 TYR HB3 H N N 345 TYR HD1 H N N 346 TYR HD2 H N N 347 TYR HE1 H N N 348 TYR HE2 H N N 349 TYR HH H N N 350 TYR HXT H N N 351 VAL N N N N 352 VAL CA C N S 353 VAL C C N N 354 VAL O O N N 355 VAL CB C N N 356 VAL CG1 C N N 357 VAL CG2 C N N 358 VAL OXT O N N 359 VAL H H N N 360 VAL H2 H N N 361 VAL HA H N N 362 VAL HB H N N 363 VAL HG11 H N N 364 VAL HG12 H N N 365 VAL HG13 H N N 366 VAL HG21 H N N 367 VAL HG22 H N N 368 VAL HG23 H N N 369 VAL HXT H N N 370 ZN ZN ZN N N 371 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 GLN N CA sing N N 76 GLN N H sing N N 77 GLN N H2 sing N N 78 GLN CA C sing N N 79 GLN CA CB sing N N 80 GLN CA HA sing N N 81 GLN C O doub N N 82 GLN C OXT sing N N 83 GLN CB CG sing N N 84 GLN CB HB2 sing N N 85 GLN CB HB3 sing N N 86 GLN CG CD sing N N 87 GLN CG HG2 sing N N 88 GLN CG HG3 sing N N 89 GLN CD OE1 doub N N 90 GLN CD NE2 sing N N 91 GLN NE2 HE21 sing N N 92 GLN NE2 HE22 sing N N 93 GLN OXT HXT sing N N 94 GLU N CA sing N N 95 GLU N H sing N N 96 GLU N H2 sing N N 97 GLU CA C sing N N 98 GLU CA CB sing N N 99 GLU CA HA sing N N 100 GLU C O doub N N 101 GLU C OXT sing N N 102 GLU CB CG sing N N 103 GLU CB HB2 sing N N 104 GLU CB HB3 sing N N 105 GLU CG CD sing N N 106 GLU CG HG2 sing N N 107 GLU CG HG3 sing N N 108 GLU CD OE1 doub N N 109 GLU CD OE2 sing N N 110 GLU OE2 HE2 sing N N 111 GLU OXT HXT sing N N 112 GLY N CA sing N N 113 GLY N H sing N N 114 GLY N H2 sing N N 115 GLY CA C sing N N 116 GLY CA HA2 sing N N 117 GLY CA HA3 sing N N 118 GLY C O doub N N 119 GLY C OXT sing N N 120 GLY OXT HXT sing N N 121 GOL C1 O1 sing N N 122 GOL C1 C2 sing N N 123 GOL C1 H11 sing N N 124 GOL C1 H12 sing N N 125 GOL O1 HO1 sing N N 126 GOL C2 O2 sing N N 127 GOL C2 C3 sing N N 128 GOL C2 H2 sing N N 129 GOL O2 HO2 sing N N 130 GOL C3 O3 sing N N 131 GOL C3 H31 sing N N 132 GOL C3 H32 sing N N 133 GOL O3 HO3 sing N N 134 HIS N CA sing N N 135 HIS N H sing N N 136 HIS N H2 sing N N 137 HIS CA C sing N N 138 HIS CA CB sing N N 139 HIS CA HA sing N N 140 HIS C O doub N N 141 HIS C OXT sing N N 142 HIS CB CG sing N N 143 HIS CB HB2 sing N N 144 HIS CB HB3 sing N N 145 HIS CG ND1 sing Y N 146 HIS CG CD2 doub Y N 147 HIS ND1 CE1 doub Y N 148 HIS ND1 HD1 sing N N 149 HIS CD2 NE2 sing Y N 150 HIS CD2 HD2 sing N N 151 HIS CE1 NE2 sing Y N 152 HIS CE1 HE1 sing N N 153 HIS NE2 HE2 sing N N 154 HIS OXT HXT sing N N 155 HOH O H1 sing N N 156 HOH O H2 sing N N 157 ILE N CA sing N N 158 ILE N H sing N N 159 ILE N H2 sing N N 160 ILE CA C sing N N 161 ILE CA CB sing N N 162 ILE CA HA sing N N 163 ILE C O doub N N 164 ILE C OXT sing N N 165 ILE CB CG1 sing N N 166 ILE CB CG2 sing N N 167 ILE CB HB sing N N 168 ILE CG1 CD1 sing N N 169 ILE CG1 HG12 sing N N 170 ILE CG1 HG13 sing N N 171 ILE CG2 HG21 sing N N 172 ILE CG2 HG22 sing N N 173 ILE CG2 HG23 sing N N 174 ILE CD1 HD11 sing N N 175 ILE CD1 HD12 sing N N 176 ILE CD1 HD13 sing N N 177 ILE OXT HXT sing N N 178 LEU N CA sing N N 179 LEU N H sing N N 180 LEU N H2 sing N N 181 LEU CA C sing N N 182 LEU CA CB sing N N 183 LEU CA HA sing N N 184 LEU C O doub N N 185 LEU C OXT sing N N 186 LEU CB CG sing N N 187 LEU CB HB2 sing N N 188 LEU CB HB3 sing N N 189 LEU CG CD1 sing N N 190 LEU CG CD2 sing N N 191 LEU CG HG sing N N 192 LEU CD1 HD11 sing N N 193 LEU CD1 HD12 sing N N 194 LEU CD1 HD13 sing N N 195 LEU CD2 HD21 sing N N 196 LEU CD2 HD22 sing N N 197 LEU CD2 HD23 sing N N 198 LEU OXT HXT sing N N 199 LYS N CA sing N N 200 LYS N H sing N N 201 LYS N H2 sing N N 202 LYS CA C sing N N 203 LYS CA CB sing N N 204 LYS CA HA sing N N 205 LYS C O doub N N 206 LYS C OXT sing N N 207 LYS CB CG sing N N 208 LYS CB HB2 sing N N 209 LYS CB HB3 sing N N 210 LYS CG CD sing N N 211 LYS CG HG2 sing N N 212 LYS CG HG3 sing N N 213 LYS CD CE sing N N 214 LYS CD HD2 sing N N 215 LYS CD HD3 sing N N 216 LYS CE NZ sing N N 217 LYS CE HE2 sing N N 218 LYS CE HE3 sing N N 219 LYS NZ HZ1 sing N N 220 LYS NZ HZ2 sing N N 221 LYS NZ HZ3 sing N N 222 LYS OXT HXT sing N N 223 MET N CA sing N N 224 MET N H sing N N 225 MET N H2 sing N N 226 MET CA C sing N N 227 MET CA CB sing N N 228 MET CA HA sing N N 229 MET C O doub N N 230 MET C OXT sing N N 231 MET CB CG sing N N 232 MET CB HB2 sing N N 233 MET CB HB3 sing N N 234 MET CG SD sing N N 235 MET CG HG2 sing N N 236 MET CG HG3 sing N N 237 MET SD CE sing N N 238 MET CE HE1 sing N N 239 MET CE HE2 sing N N 240 MET CE HE3 sing N N 241 MET OXT HXT sing N N 242 PHE N CA sing N N 243 PHE N H sing N N 244 PHE N H2 sing N N 245 PHE CA C sing N N 246 PHE CA CB sing N N 247 PHE CA HA sing N N 248 PHE C O doub N N 249 PHE C OXT sing N N 250 PHE CB CG sing N N 251 PHE CB HB2 sing N N 252 PHE CB HB3 sing N N 253 PHE CG CD1 doub Y N 254 PHE CG CD2 sing Y N 255 PHE CD1 CE1 sing Y N 256 PHE CD1 HD1 sing N N 257 PHE CD2 CE2 doub Y N 258 PHE CD2 HD2 sing N N 259 PHE CE1 CZ doub Y N 260 PHE CE1 HE1 sing N N 261 PHE CE2 CZ sing Y N 262 PHE CE2 HE2 sing N N 263 PHE CZ HZ sing N N 264 PHE OXT HXT sing N N 265 PRO N CA sing N N 266 PRO N CD sing N N 267 PRO N H sing N N 268 PRO CA C sing N N 269 PRO CA CB sing N N 270 PRO CA HA sing N N 271 PRO C O doub N N 272 PRO C OXT sing N N 273 PRO CB CG sing N N 274 PRO CB HB2 sing N N 275 PRO CB HB3 sing N N 276 PRO CG CD sing N N 277 PRO CG HG2 sing N N 278 PRO CG HG3 sing N N 279 PRO CD HD2 sing N N 280 PRO CD HD3 sing N N 281 PRO OXT HXT sing N N 282 SER N CA sing N N 283 SER N H sing N N 284 SER N H2 sing N N 285 SER CA C sing N N 286 SER CA CB sing N N 287 SER CA HA sing N N 288 SER C O doub N N 289 SER C OXT sing N N 290 SER CB OG sing N N 291 SER CB HB2 sing N N 292 SER CB HB3 sing N N 293 SER OG HG sing N N 294 SER OXT HXT sing N N 295 THR N CA sing N N 296 THR N H sing N N 297 THR N H2 sing N N 298 THR CA C sing N N 299 THR CA CB sing N N 300 THR CA HA sing N N 301 THR C O doub N N 302 THR C OXT sing N N 303 THR CB OG1 sing N N 304 THR CB CG2 sing N N 305 THR CB HB sing N N 306 THR OG1 HG1 sing N N 307 THR CG2 HG21 sing N N 308 THR CG2 HG22 sing N N 309 THR CG2 HG23 sing N N 310 THR OXT HXT sing N N 311 TYR N CA sing N N 312 TYR N H sing N N 313 TYR N H2 sing N N 314 TYR CA C sing N N 315 TYR CA CB sing N N 316 TYR CA HA sing N N 317 TYR C O doub N N 318 TYR C OXT sing N N 319 TYR CB CG sing N N 320 TYR CB HB2 sing N N 321 TYR CB HB3 sing N N 322 TYR CG CD1 doub Y N 323 TYR CG CD2 sing Y N 324 TYR CD1 CE1 sing Y N 325 TYR CD1 HD1 sing N N 326 TYR CD2 CE2 doub Y N 327 TYR CD2 HD2 sing N N 328 TYR CE1 CZ doub Y N 329 TYR CE1 HE1 sing N N 330 TYR CE2 CZ sing Y N 331 TYR CE2 HE2 sing N N 332 TYR CZ OH sing N N 333 TYR OH HH sing N N 334 TYR OXT HXT sing N N 335 VAL N CA sing N N 336 VAL N H sing N N 337 VAL N H2 sing N N 338 VAL CA C sing N N 339 VAL CA CB sing N N 340 VAL CA HA sing N N 341 VAL C O doub N N 342 VAL C OXT sing N N 343 VAL CB CG1 sing N N 344 VAL CB CG2 sing N N 345 VAL CB HB sing N N 346 VAL CG1 HG11 sing N N 347 VAL CG1 HG12 sing N N 348 VAL CG1 HG13 sing N N 349 VAL CG2 HG21 sing N N 350 VAL CG2 HG22 sing N N 351 VAL CG2 HG23 sing N N 352 VAL OXT HXT sing N N 353 # _atom_sites.entry_id 4QL5 _atom_sites.fract_transf_matrix[1][1] 0.011957 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011957 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.019773 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S ZN # loop_