HEADER OXIDOREDUCTASE 11-JUN-14 4QL7 TITLE CRYSTAL STRUCTURE OF C-TERMINUS TRUNCATED ALKYLHYDROPEROXIDE REDUCTASE TITLE 2 SUBUNIT C (AHPC1-172) FROM E. COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALKYLHYDROPEROXIDE REDUCTASE SUBUNIT C; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 FRAGMENT: C-TERMINUS TRUNCATED FORM, UNP RESIDES 1-172; COMPND 5 SYNONYM: ALKYL HYDROPEROXIDE REDUCTASE, C22 SUBUNIT, PEROXIREDOXIN; COMPND 6 EC: 1.8.1.-, 1.11.1.15; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 STRAIN: BL21 DE3; SOURCE 5 GENE: AHPC; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET9-D1(+)-HIS6 KEYWDS OXIDOREDUCTASE, PEROXIREDOXIN, AHPC EXPDTA X-RAY DIFFRACTION AUTHOR N.KAMARIAH,G.GRUBER,F.EISENHABER,B.EISENHABER REVDAT 3 08-NOV-23 4QL7 1 REMARK REVDAT 2 24-AUG-22 4QL7 1 JRNL REVDAT 1 24-SEP-14 4QL7 0 JRNL AUTH P.V.DIP,N.KAMARIAH,W.NARTEY,C.BEUSHAUSEN,V.A.KOSTYUCHENKO, JRNL AUTH 2 T.S.NG,S.M.LOK,W.G.SAW,F.EISENHABER,B.EISENHABER,G.GRUBER JRNL TITL KEY ROLES OF THE ESCHERICHIA COLI AHPC C-TERMINUS IN JRNL TITL 2 ASSEMBLY AND CATALYSIS OF ALKYLHYDROPEROXIDE REDUCTASE, AN JRNL TITL 3 ENZYME ESSENTIAL FOR THE ALLEVIATION OF OXIDATIVE STRESS. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1837 1932 2014 JRNL REFN ISSN 0006-3002 JRNL PMID 25193562 JRNL DOI 10.1016/J.BBABIO.2014.08.007 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH P.V.DIP,N.KAMARIAH,M.S.S.MANIMEKALAI,W.NARTEY, REMARK 1 AUTH 2 A.M.BALAKRISHNA,F.EISENHABER,B.EISENHABER,G.GRUBER REMARK 1 TITL THE UPS AND DOWNS IN AHPF: STRUCTURE, MECHANISM AND ENSEMBLE REMARK 1 TITL 2 FORMATION OF THE ALKYLHYDROPEROXIDE REDUCTASE SUBUNITS AHPC REMARK 1 TITL 3 AND AHPF FROM ESCHERICHIA COLI REMARK 1 REF TO BE PUBLISHED REMARK 1 REFN REMARK 2 REMARK 2 RESOLUTION. 3.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 15934 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.274 REMARK 3 R VALUE (WORKING SET) : 0.273 REMARK 3 FREE R VALUE : 0.290 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 797 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.85 REMARK 3 REFLECTION IN BIN (WORKING SET) : 981 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 86.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.3710 REMARK 3 BIN FREE R VALUE SET COUNT : 54 REMARK 3 BIN FREE R VALUE : 0.3550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6563 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.32000 REMARK 3 B22 (A**2) : -0.32000 REMARK 3 B33 (A**2) : 1.05000 REMARK 3 B12 (A**2) : -0.32000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.738 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.514 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 82.851 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.814 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.791 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6719 ; 0.004 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6238 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9103 ; 0.747 ; 1.935 REMARK 3 BOND ANGLES OTHERS (DEGREES): 14383 ; 0.646 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 827 ; 4.337 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 326 ;32.093 ;24.601 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1113 ;14.832 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;11.088 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 997 ; 0.047 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7635 ; 0.002 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1557 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B C D E REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 160 4 REMARK 3 1 B 1 B 160 4 REMARK 3 1 C 1 C 160 4 REMARK 3 1 D 1 D 160 4 REMARK 3 1 E 1 E 160 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 2469 ; 0.720 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 B (A): 2469 ; 0.620 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 C (A): 2469 ; 0.640 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 D (A): 2469 ; 0.730 ; 0.500 REMARK 3 MEDIUM POSITIONAL 1 E (A): 2469 ; 0.790 ; 0.500 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 5 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 166 REMARK 3 ORIGIN FOR THE GROUP (A): 57.8367 -78.7582 10.4368 REMARK 3 T TENSOR REMARK 3 T11: 0.4098 T22: 0.2909 REMARK 3 T33: 0.5268 T12: -0.0642 REMARK 3 T13: 0.1295 T23: -0.0999 REMARK 3 L TENSOR REMARK 3 L11: 5.4763 L22: 2.4328 REMARK 3 L33: 6.3653 L12: 0.5961 REMARK 3 L13: -2.1508 L23: -0.5160 REMARK 3 S TENSOR REMARK 3 S11: -0.8339 S12: 0.1723 S13: -0.6877 REMARK 3 S21: -0.7123 S22: 0.2902 S23: -0.5773 REMARK 3 S31: 0.7959 S32: 0.6069 S33: 0.5436 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 166 REMARK 3 ORIGIN FOR THE GROUP (A): 41.7427 -74.6189 -9.9181 REMARK 3 T TENSOR REMARK 3 T11: 0.6335 T22: 0.5631 REMARK 3 T33: 0.2708 T12: -0.3979 REMARK 3 T13: 0.0101 T23: -0.1853 REMARK 3 L TENSOR REMARK 3 L11: 3.3753 L22: 6.7625 REMARK 3 L33: 2.0450 L12: 0.9323 REMARK 3 L13: 0.6986 L23: -2.1385 REMARK 3 S TENSOR REMARK 3 S11: -0.1087 S12: 0.5020 S13: -0.3324 REMARK 3 S21: -0.6038 S22: -0.0469 S23: -0.1478 REMARK 3 S31: 0.3128 S32: 0.2886 S33: 0.1555 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 170 REMARK 3 ORIGIN FOR THE GROUP (A): 40.1352 -39.7761 -17.1086 REMARK 3 T TENSOR REMARK 3 T11: 0.5936 T22: 0.5250 REMARK 3 T33: 0.3579 T12: -0.4443 REMARK 3 T13: 0.0638 T23: -0.0210 REMARK 3 L TENSOR REMARK 3 L11: 2.4659 L22: 5.7367 REMARK 3 L33: 2.4554 L12: -0.5051 REMARK 3 L13: 0.2635 L23: -0.9266 REMARK 3 S TENSOR REMARK 3 S11: 0.2431 S12: 0.3293 S13: 0.3968 REMARK 3 S21: -0.5622 S22: -0.1351 S23: 0.3684 REMARK 3 S31: 0.0658 S32: -0.1949 S33: -0.1080 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 165 REMARK 3 ORIGIN FOR THE GROUP (A): 16.1485 -31.3986 -12.7840 REMARK 3 T TENSOR REMARK 3 T11: 0.7652 T22: 0.7158 REMARK 3 T33: 0.5885 T12: -0.4352 REMARK 3 T13: -0.0199 T23: 0.2106 REMARK 3 L TENSOR REMARK 3 L11: 3.7145 L22: 4.6235 REMARK 3 L33: 2.4891 L12: 0.2641 REMARK 3 L13: 0.0480 L23: 1.6459 REMARK 3 S TENSOR REMARK 3 S11: 0.0315 S12: 0.4271 S13: -0.2636 REMARK 3 S21: -0.8210 S22: 0.2991 S23: 0.1484 REMARK 3 S31: -0.4378 S32: -0.6682 S33: -0.3306 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 1 E 165 REMARK 3 ORIGIN FOR THE GROUP (A): 16.9894 -10.6326 14.8581 REMARK 3 T TENSOR REMARK 3 T11: 0.9375 T22: 0.7187 REMARK 3 T33: 0.6938 T12: -0.0958 REMARK 3 T13: 0.2765 T23: 0.2345 REMARK 3 L TENSOR REMARK 3 L11: 2.7461 L22: 2.6754 REMARK 3 L33: 3.1235 L12: 0.2095 REMARK 3 L13: 0.4661 L23: 2.1147 REMARK 3 S TENSOR REMARK 3 S11: 0.3399 S12: -0.0486 S13: 0.5003 REMARK 3 S21: -0.2453 S22: -0.2273 S23: 0.0869 REMARK 3 S31: -1.1190 S32: -0.5044 S33: -0.1126 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4QL7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 19-JUN-14. REMARK 100 THE DEPOSITION ID IS D_1000086194. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-FEB-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM 3.3.20 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 16581 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.50500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4O5R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.08 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULFATE, 100MM MES, PH REMARK 280 6.5, 10MM COBALT CHLORIDE, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.42333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 96.84667 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 96.84667 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 48.42333 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DECAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DECAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 19860 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 68810 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -173.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 48.42333 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PRO A 167 REMARK 465 ALA A 168 REMARK 465 LYS A 169 REMARK 465 TRP A 170 REMARK 465 LYS A 171 REMARK 465 GLU A 172 REMARK 465 PRO B 167 REMARK 465 ALA B 168 REMARK 465 LYS B 169 REMARK 465 TRP B 170 REMARK 465 LYS B 171 REMARK 465 GLU B 172 REMARK 465 LYS C 171 REMARK 465 GLU C 172 REMARK 465 CYS D 166 REMARK 465 PRO D 167 REMARK 465 ALA D 168 REMARK 465 LYS D 169 REMARK 465 TRP D 170 REMARK 465 LYS D 171 REMARK 465 GLU D 172 REMARK 465 CYS E 166 REMARK 465 PRO E 167 REMARK 465 ALA E 168 REMARK 465 LYS E 169 REMARK 465 TRP E 170 REMARK 465 LYS E 171 REMARK 465 GLU E 172 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 3 37.58 -94.18 REMARK 500 LYS A 12 76.68 -155.52 REMARK 500 ASN A 18 72.88 62.88 REMARK 500 ARG A 32 166.65 67.97 REMARK 500 CYS A 47 129.63 -38.43 REMARK 500 PRO A 48 32.61 -87.89 REMARK 500 THR A 49 -172.51 -69.90 REMARK 500 GLU A 50 -64.51 66.49 REMARK 500 ASP B 109 76.40 47.76 REMARK 500 ASN B 110 40.12 -153.61 REMARK 500 GLU B 164 -21.49 73.26 REMARK 500 VAL B 165 -155.02 59.53 REMARK 500 LYS C 12 87.41 -152.97 REMARK 500 PRO C 40 -77.76 -40.89 REMARK 500 ASN C 110 45.82 -144.12 REMARK 500 VAL C 165 174.24 66.39 REMARK 500 SER D 2 86.68 41.12 REMARK 500 PHE D 43 19.16 56.36 REMARK 500 HIS D 57 -9.94 69.94 REMARK 500 ASN E 5 62.82 65.36 REMARK 500 ASN E 18 67.34 28.15 REMARK 500 PRO E 48 49.73 -78.83 REMARK 500 GLU E 87 -176.30 68.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 CYS C 166 PRO C 167 142.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4QL9 RELATED DB: PDB DBREF 4QL7 A 1 172 UNP C6EK89 C6EK89_ECOBD 1 172 DBREF 4QL7 B 1 172 UNP C6EK89 C6EK89_ECOBD 1 172 DBREF 4QL7 C 1 172 UNP C6EK89 C6EK89_ECOBD 1 172 DBREF 4QL7 D 1 172 UNP C6EK89 C6EK89_ECOBD 1 172 DBREF 4QL7 E 1 172 UNP C6EK89 C6EK89_ECOBD 1 172 SEQRES 1 A 172 MET SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN SEQRES 2 A 172 GLN ALA PHE LYS ASN GLY GLU PHE ILE GLU ILE THR GLU SEQRES 3 A 172 LYS ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR SEQRES 4 A 172 PRO ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY SEQRES 5 A 172 ASP VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY SEQRES 6 A 172 VAL ASP VAL TYR ALA VAL SER THR ASP THR HIS PHE THR SEQRES 7 A 172 HIS LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS SEQRES 8 A 172 ILE LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU SEQRES 9 A 172 THR ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU SEQRES 10 A 172 ALA ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE SEQRES 11 A 172 ILE GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG SEQRES 12 A 172 ASP ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN SEQRES 13 A 172 TYR VAL ALA SER HIS PRO GLY GLU VAL CYS PRO ALA LYS SEQRES 14 A 172 TRP LYS GLU SEQRES 1 B 172 MET SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN SEQRES 2 B 172 GLN ALA PHE LYS ASN GLY GLU PHE ILE GLU ILE THR GLU SEQRES 3 B 172 LYS ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR SEQRES 4 B 172 PRO ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY SEQRES 5 B 172 ASP VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY SEQRES 6 B 172 VAL ASP VAL TYR ALA VAL SER THR ASP THR HIS PHE THR SEQRES 7 B 172 HIS LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS SEQRES 8 B 172 ILE LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU SEQRES 9 B 172 THR ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU SEQRES 10 B 172 ALA ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE SEQRES 11 B 172 ILE GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG SEQRES 12 B 172 ASP ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN SEQRES 13 B 172 TYR VAL ALA SER HIS PRO GLY GLU VAL CYS PRO ALA LYS SEQRES 14 B 172 TRP LYS GLU SEQRES 1 C 172 MET SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN SEQRES 2 C 172 GLN ALA PHE LYS ASN GLY GLU PHE ILE GLU ILE THR GLU SEQRES 3 C 172 LYS ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR SEQRES 4 C 172 PRO ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY SEQRES 5 C 172 ASP VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY SEQRES 6 C 172 VAL ASP VAL TYR ALA VAL SER THR ASP THR HIS PHE THR SEQRES 7 C 172 HIS LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS SEQRES 8 C 172 ILE LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU SEQRES 9 C 172 THR ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU SEQRES 10 C 172 ALA ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE SEQRES 11 C 172 ILE GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG SEQRES 12 C 172 ASP ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN SEQRES 13 C 172 TYR VAL ALA SER HIS PRO GLY GLU VAL CYS PRO ALA LYS SEQRES 14 C 172 TRP LYS GLU SEQRES 1 D 172 MET SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN SEQRES 2 D 172 GLN ALA PHE LYS ASN GLY GLU PHE ILE GLU ILE THR GLU SEQRES 3 D 172 LYS ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR SEQRES 4 D 172 PRO ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY SEQRES 5 D 172 ASP VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY SEQRES 6 D 172 VAL ASP VAL TYR ALA VAL SER THR ASP THR HIS PHE THR SEQRES 7 D 172 HIS LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS SEQRES 8 D 172 ILE LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU SEQRES 9 D 172 THR ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU SEQRES 10 D 172 ALA ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE SEQRES 11 D 172 ILE GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG SEQRES 12 D 172 ASP ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN SEQRES 13 D 172 TYR VAL ALA SER HIS PRO GLY GLU VAL CYS PRO ALA LYS SEQRES 14 D 172 TRP LYS GLU SEQRES 1 E 172 MET SER LEU ILE ASN THR LYS ILE LYS PRO PHE LYS ASN SEQRES 2 E 172 GLN ALA PHE LYS ASN GLY GLU PHE ILE GLU ILE THR GLU SEQRES 3 E 172 LYS ASP THR GLU GLY ARG TRP SER VAL PHE PHE PHE TYR SEQRES 4 E 172 PRO ALA ASP PHE THR PHE VAL CYS PRO THR GLU LEU GLY SEQRES 5 E 172 ASP VAL ALA ASP HIS TYR GLU GLU LEU GLN LYS LEU GLY SEQRES 6 E 172 VAL ASP VAL TYR ALA VAL SER THR ASP THR HIS PHE THR SEQRES 7 E 172 HIS LYS ALA TRP HIS SER SER SER GLU THR ILE ALA LYS SEQRES 8 E 172 ILE LYS TYR ALA MET ILE GLY ASP PRO THR GLY ALA LEU SEQRES 9 E 172 THR ARG ASN PHE ASP ASN MET ARG GLU ASP GLU GLY LEU SEQRES 10 E 172 ALA ASP ARG ALA THR PHE VAL VAL ASP PRO GLN GLY ILE SEQRES 11 E 172 ILE GLN ALA ILE GLU VAL THR ALA GLU GLY ILE GLY ARG SEQRES 12 E 172 ASP ALA SER ASP LEU LEU ARG LYS ILE LYS ALA ALA GLN SEQRES 13 E 172 TYR VAL ALA SER HIS PRO GLY GLU VAL CYS PRO ALA LYS SEQRES 14 E 172 TRP LYS GLU HELIX 1 1 LYS A 27 GLU A 30 5 4 HELIX 2 2 GLU A 50 GLY A 65 1 16 HELIX 3 3 THR A 75 SER A 85 1 11 HELIX 4 4 GLY A 102 PHE A 108 1 7 HELIX 5 5 ASP A 144 HIS A 161 1 18 HELIX 6 6 PRO B 48 HIS B 57 1 10 HELIX 7 7 HIS B 57 LEU B 64 1 8 HELIX 8 8 THR B 75 SER B 86 1 12 HELIX 9 9 SER B 86 LYS B 91 1 6 HELIX 10 10 GLY B 102 PHE B 108 1 7 HELIX 11 11 ASP B 144 HIS B 161 1 18 HELIX 12 12 PRO C 48 HIS C 57 1 10 HELIX 13 13 HIS C 57 LEU C 64 1 8 HELIX 14 14 THR C 75 SER C 86 1 12 HELIX 15 15 THR C 88 ILE C 92 5 5 HELIX 16 16 GLY C 102 PHE C 108 1 7 HELIX 17 17 ASP C 144 HIS C 161 1 18 HELIX 18 18 HIS D 57 GLY D 65 1 9 HELIX 19 19 THR D 75 SER D 86 1 12 HELIX 20 20 THR D 88 ILE D 92 5 5 HELIX 21 21 GLY D 102 PHE D 108 1 7 HELIX 22 22 ASP D 144 HIS D 161 1 18 HELIX 23 23 GLU E 26 GLU E 30 1 5 HELIX 24 24 PRO E 48 GLY E 65 1 18 HELIX 25 25 THR E 75 SER E 86 1 12 HELIX 26 26 GLU E 87 ILE E 92 5 6 HELIX 27 27 GLY E 102 PHE E 108 1 7 HELIX 28 28 ASP E 144 HIS E 161 1 18 SHEET 1 A 9 PHE A 21 THR A 25 0 SHEET 2 A 9 LYS A 12 PHE A 16 -1 N ALA A 15 O ILE A 22 SHEET 3 A 9 ALA A 95 GLY A 98 -1 O MET A 96 N PHE A 16 SHEET 4 A 9 VAL A 66 SER A 72 1 N ALA A 70 O ILE A 97 SHEET 5 A 9 TRP A 33 PHE A 38 1 N PHE A 37 O TYR A 69 SHEET 6 A 9 ARG A 120 VAL A 125 -1 O ALA A 121 N PHE A 38 SHEET 7 A 9 ILE A 131 THR A 137 -1 O GLN A 132 N VAL A 124 SHEET 8 A 9 ILE B 131 THR B 137 -1 O ILE B 134 N VAL A 136 SHEET 9 A 9 ALA B 121 VAL B 125 -1 N THR B 122 O GLU B 135 SHEET 1 B 2 MET A 111 ARG A 112 0 SHEET 2 B 2 LEU A 117 ALA A 118 -1 O LEU A 117 N ARG A 112 SHEET 1 C 5 PHE B 21 THR B 25 0 SHEET 2 C 5 LYS B 12 PHE B 16 -1 N ASN B 13 O ILE B 24 SHEET 3 C 5 ALA B 95 GLY B 98 -1 O GLY B 98 N GLN B 14 SHEET 4 C 5 VAL B 66 SER B 72 1 N ALA B 70 O ILE B 97 SHEET 5 C 5 TRP B 33 PHE B 38 1 N PHE B 37 O TYR B 69 SHEET 1 D 2 MET B 111 ARG B 112 0 SHEET 2 D 2 LEU B 117 ALA B 118 -1 O LEU B 117 N ARG B 112 SHEET 1 E14 PHE C 21 THR C 25 0 SHEET 2 E14 LYS C 12 PHE C 16 -1 N ALA C 15 O ILE C 22 SHEET 3 E14 ALA C 95 GLY C 98 -1 O GLY C 98 N GLN C 14 SHEET 4 E14 VAL C 66 SER C 72 1 N ALA C 70 O ILE C 97 SHEET 5 E14 TRP C 33 PHE C 38 1 N PHE C 37 O TYR C 69 SHEET 6 E14 ARG C 120 VAL C 125 -1 O VAL C 125 N SER C 34 SHEET 7 E14 ILE C 131 THR C 137 -1 O GLU C 135 N THR C 122 SHEET 8 E14 ILE D 131 THR D 137 -1 O VAL D 136 N ILE C 134 SHEET 9 E14 ARG D 120 VAL D 125 -1 N ARG D 120 O THR D 137 SHEET 10 E14 TRP D 33 PHE D 38 -1 N SER D 34 O VAL D 125 SHEET 11 E14 VAL D 66 SER D 72 1 O ASP D 67 N TRP D 33 SHEET 12 E14 ALA D 95 GLY D 98 1 O ILE D 97 N ALA D 70 SHEET 13 E14 LYS D 12 LYS D 17 -1 N GLN D 14 O GLY D 98 SHEET 14 E14 GLU D 20 THR D 25 -1 O ILE D 24 N ASN D 13 SHEET 1 F 2 MET C 111 ARG C 112 0 SHEET 2 F 2 LEU C 117 ALA C 118 -1 O LEU C 117 N ARG C 112 SHEET 1 G 2 MET D 111 ARG D 112 0 SHEET 2 G 2 LEU D 117 ALA D 118 -1 O LEU D 117 N ARG D 112 SHEET 1 H 7 GLU E 20 THR E 25 0 SHEET 2 H 7 LYS E 12 LYS E 17 -1 N ALA E 15 O ILE E 22 SHEET 3 H 7 ALA E 95 GLY E 98 -1 O GLY E 98 N GLN E 14 SHEET 4 H 7 VAL E 66 SER E 72 1 N ALA E 70 O ILE E 97 SHEET 5 H 7 TRP E 33 PHE E 38 1 N TRP E 33 O ASP E 67 SHEET 6 H 7 ARG E 120 VAL E 125 -1 O ALA E 121 N PHE E 38 SHEET 7 H 7 ILE E 131 THR E 137 -1 O THR E 137 N ARG E 120 SHEET 1 I 2 MET E 111 ARG E 112 0 SHEET 2 I 2 LEU E 117 ALA E 118 -1 O LEU E 117 N ARG E 112 SSBOND 1 CYS A 47 CYS B 166 1555 1555 2.03 SSBOND 2 CYS A 166 CYS B 47 1555 1555 2.03 SSBOND 3 CYS C 166 CYS D 47 1555 1555 2.03 CRYST1 137.129 137.129 145.270 90.00 90.00 120.00 P 31 2 1 30 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007292 0.004210 0.000000 0.00000 SCALE2 0.000000 0.008421 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006884 0.00000