data_4QLM # _entry.id 4QLM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QLM pdb_00004qlm 10.2210/pdb4qlm/pdb NDB NA3037 ? ? RCSB RCSB086209 ? ? WWPDB D_1000086209 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-08-13 2 'Structure model' 1 1 2014-09-03 3 'Structure model' 1 2 2017-11-22 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp 3 4 'Structure model' chem_comp_atom 4 4 'Structure model' chem_comp_bond 5 4 'Structure model' database_2 6 4 'Structure model' entity 7 4 'Structure model' pdbx_entity_nonpoly 8 4 'Structure model' pdbx_struct_conn_angle 9 4 'Structure model' struct_conn 10 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_chem_comp.name' 3 4 'Structure model' '_database_2.pdbx_DOI' 4 4 'Structure model' '_database_2.pdbx_database_accession' 5 4 'Structure model' '_entity.pdbx_description' 6 4 'Structure model' '_pdbx_entity_nonpoly.name' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 17 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 19 4 'Structure model' '_pdbx_struct_conn_angle.value' 20 4 'Structure model' '_struct_conn.pdbx_dist_value' 21 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 22 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 24 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 25 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 26 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 27 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 33 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 34 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4QLM _pdbx_database_status.recvd_initial_deposition_date 2014-06-12 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4QLN _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ren, A.M.' 1 'Patel, D.J.' 2 # _citation.id primary _citation.title 'c-di-AMP binds the ydaO riboswitch in two pseudo-symmetry-related pockets.' _citation.journal_abbrev Nat.Chem.Biol. _citation.journal_volume 10 _citation.page_first 780 _citation.page_last 786 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1552-4450 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25086509 _citation.pdbx_database_id_DOI 10.1038/nchembio.1606 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ren, A.' 1 ? primary 'Patel, D.J.' 2 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'RNA (108-MER)' 40514.238 1 ? ? ? 'ydao Riboswitch' 2 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 3 non-polymer syn ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 658.412 2 ? ? ? ? 4 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 5 water nat water 18.015 33 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type polyribonucleotide _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GGAUCGCUGAACCCGAAAGGGGCGGGGGACCCAGAAAUGGGGCGAAUCUCUUCCGAAAGGAAGAGUAGGGUUACUCCUUC GACCCGAGCCCGUCAGCUAACCUCGCAAGCGUCCGAAGGAGAAUC ; _entity_poly.pdbx_seq_one_letter_code_can ;GGAUCGCUGAACCCGAAAGGGGCGGGGGACCCAGAAAUGGGGCGAAUCUCUUCCGAAAGGAAGAGUAGGGUUACUCCUUC GACCCGAGCCCGUCAGCUAACCUCGCAAGCGUCCGAAGGAGAAUC ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MAGNESIUM ION' MG 3 ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; 2BA 4 'SULFATE ION' SO4 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 G n 1 2 G n 1 3 A n 1 4 U n 1 5 C n 1 6 G n 1 7 C n 1 8 U n 1 9 G n 1 10 A n 1 11 A n 1 12 C n 1 13 C n 1 14 C n 1 15 G n 1 16 A n 1 17 A n 1 18 A n 1 19 G n 1 20 G n 1 21 G n 1 22 G n 1 23 C n 1 24 G n 1 25 G n 1 26 G n 1 27 G n 1 28 G n 1 29 A n 1 30 C n 1 31 C n 1 32 C n 1 33 A n 1 34 G n 1 35 A n 1 36 A n 1 37 A n 1 38 U n 1 39 G n 1 40 G n 1 41 G n 1 42 G n 1 43 C n 1 44 G n 1 45 A n 1 46 A n 1 47 U n 1 48 C n 1 49 U n 1 50 C n 1 51 U n 1 52 U n 1 53 C n 1 54 C n 1 55 G n 1 56 A n 1 57 A n 1 58 A n 1 59 G n 1 60 G n 1 61 A n 1 62 A n 1 63 G n 1 64 A n 1 65 G n 1 66 U n 1 67 A n 1 68 G n 1 69 G n 1 70 G n 1 71 U n 1 72 U n 1 73 A n 1 74 C n 1 75 U n 1 76 C n 1 77 C n 1 78 U n 1 79 U n 1 80 C n 1 81 G n 1 82 A n 1 83 C n 1 84 C n 1 85 C n 1 86 G n 1 87 A n 1 88 G n 1 89 C n 1 90 C n 1 91 C n 1 92 G n 1 93 U n 1 94 C n 1 95 A n 1 96 G n 1 97 C n 1 98 U n 1 99 A n 1 100 A n 1 101 C n 1 102 C n 1 103 U n 1 104 C n 1 105 G n 1 106 C n 1 107 A n 1 108 A n 1 109 G n 1 110 C n 1 111 G n 1 112 U n 1 113 C n 1 114 C n 1 115 G n 1 116 A n 1 117 A n 1 118 G n 1 119 G n 1 120 A n 1 121 G n 1 122 A n 1 123 A n 1 124 U n 1 125 C n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain MB4 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Thermoanaerobacter tengcongensis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 273068 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name ? _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'in vitro translation' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 2BA non-polymer . ;(2R,3R,3aS,5R,7aR,9R,10R,10aS,12R,14aR)-2,9-bis(6-amino-9H-purin-9-yl)octahydro-2H,7H-difuro[3,2-d:3',2'-j][1,3,7,9,2,8 ]tetraoxadiphosphacyclododecine-3,5,10,12-tetrol 5,12-dioxide ; "bis-(3',5')-cyclic-dimeric-Adenosine-monophosphate" 'C20 H24 N10 O12 P2' 658.412 A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 HOH non-polymer . WATER ? 'H2 O' 18.015 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 G 1 1 ? ? ? A . n A 1 2 G 2 2 ? ? ? A . n A 1 3 A 3 3 3 A A A . n A 1 4 U 4 4 4 U U A . n A 1 5 C 5 5 5 C C A . n A 1 6 G 6 6 6 G G A . n A 1 7 C 7 7 7 C C A . n A 1 8 U 8 8 8 U U A . n A 1 9 G 9 9 9 G G A . n A 1 10 A 10 10 10 A A A . n A 1 11 A 11 11 11 A A A . n A 1 12 C 12 12 12 C C A . n A 1 13 C 13 13 ? ? ? A . n A 1 14 C 14 14 ? ? ? A . n A 1 15 G 15 15 ? ? ? A . n A 1 16 A 16 16 ? ? ? A . n A 1 17 A 17 17 ? ? ? A . n A 1 18 A 18 18 ? ? ? A . n A 1 19 G 19 19 ? ? ? A . n A 1 20 G 20 20 ? ? ? A . n A 1 21 G 21 21 ? ? ? A . n A 1 22 G 22 22 22 G G A . n A 1 23 C 23 23 23 C C A . n A 1 24 G 24 24 24 G G A . n A 1 25 G 25 25 25 G G A . n A 1 26 G 26 26 26 G G A . n A 1 27 G 27 27 27 G G A . n A 1 28 G 28 28 28 G G A . n A 1 29 A 29 29 29 A A A . n A 1 30 C 30 30 30 C C A . n A 1 31 C 31 31 31 C C A . n A 1 32 C 32 32 32 C C A . n A 1 33 A 33 33 33 A A A . n A 1 34 G 34 34 34 G G A . n A 1 35 A 35 35 ? ? ? A . n A 1 36 A 36 36 ? ? ? A . n A 1 37 A 37 37 ? ? ? A . n A 1 38 U 38 38 ? ? ? A . n A 1 39 G 39 39 39 G G A . n A 1 40 G 40 40 40 G G A . n A 1 41 G 41 41 41 G G A . n A 1 42 G 42 42 42 G G A . n A 1 43 C 43 43 43 C C A . n A 1 44 G 44 44 44 G G A . n A 1 45 A 45 45 45 A A A . n A 1 46 A 46 46 46 A A A . n A 1 47 U 47 47 47 U U A . n A 1 48 C 48 48 48 C C A . n A 1 49 U 49 49 49 U U A . n A 1 50 C 50 50 50 C C A . n A 1 51 U 51 51 51 U U A . n A 1 52 U 52 52 52 U U A . n A 1 53 C 53 53 53 C C A . n A 1 54 C 54 54 54 C C A . n A 1 55 G 55 55 55 G G A . n A 1 56 A 56 56 56 A A A . n A 1 57 A 57 57 57 A A A . n A 1 58 A 58 58 58 A A A . n A 1 59 G 59 59 59 G G A . n A 1 60 G 60 60 60 G G A . n A 1 61 A 61 61 61 A A A . n A 1 62 A 62 62 62 A A A . n A 1 63 G 63 63 63 G G A . n A 1 64 A 64 64 64 A A A . n A 1 65 G 65 65 65 G G A . n A 1 66 U 66 66 66 U U A . n A 1 67 A 67 67 67 A A A . n A 1 68 G 68 68 68 G G A . n A 1 69 G 69 69 69 G G A . n A 1 70 G 70 70 70 G G A . n A 1 71 U 71 71 71 U U A . n A 1 72 U 72 72 72 U U A . n A 1 73 A 73 73 73 A A A . n A 1 74 C 74 74 74 C C A . n A 1 75 U 75 75 75 U U A . n A 1 76 C 76 76 76 C C A . n A 1 77 C 77 77 77 C C A . n A 1 78 U 78 78 78 U U A . n A 1 79 U 79 79 79 U U A . n A 1 80 C 80 80 80 C C A . n A 1 81 G 81 81 81 G G A . n A 1 82 A 82 82 82 A A A . n A 1 83 C 83 83 83 C C A . n A 1 84 C 84 84 84 C C A . n A 1 85 C 85 85 85 C C A . n A 1 86 G 86 86 86 G G A . n A 1 87 A 87 87 87 A A A . n A 1 88 G 88 88 88 G G A . n A 1 89 C 89 89 89 C C A . n A 1 90 C 90 90 90 C C A . n A 1 91 C 91 91 91 C C A . n A 1 92 G 92 92 92 G G A . n A 1 93 U 93 93 93 U U A . n A 1 94 C 94 94 94 C C A . n A 1 95 A 95 95 95 A A A . n A 1 96 G 96 96 96 G G A . n A 1 97 C 97 97 97 C C A . n A 1 98 U 98 98 98 U U A . n A 1 99 A 99 99 99 A A A . n A 1 100 A 100 100 100 A A A . n A 1 101 C 101 101 101 C C A . n A 1 102 C 102 102 102 C C A . n A 1 103 U 103 103 103 U U A . n A 1 104 C 104 104 104 C C A . n A 1 105 G 105 105 105 G G A . n A 1 106 C 106 106 106 C C A . n A 1 107 A 107 107 107 A A A . n A 1 108 A 108 108 108 A A A . n A 1 109 G 109 109 109 G G A . n A 1 110 C 110 110 110 C C A . n A 1 111 G 111 111 111 G G A . n A 1 112 U 112 112 112 U U A . n A 1 113 C 113 113 113 C C A . n A 1 114 C 114 114 114 C C A . n A 1 115 G 115 115 115 G G A . n A 1 116 A 116 116 116 A A A . n A 1 117 A 117 117 117 A A A . n A 1 118 G 118 118 118 G G A . n A 1 119 G 119 119 119 G G A . n A 1 120 A 120 120 120 A A A . n A 1 121 G 121 121 121 G G A . n A 1 122 A 122 122 122 A A A . n A 1 123 A 123 123 123 A A A . n A 1 124 U 124 124 ? ? ? A . n A 1 125 C 125 125 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 MG 1 201 1 MG MG A . C 2 MG 1 202 3 MG MG A . D 3 2BA 1 203 2 2BA 2BA A . E 3 2BA 1 204 3 2BA 2BA A . F 4 SO4 1 205 1 SO4 SO4 A . G 4 SO4 1 206 2 SO4 SO4 A . H 5 HOH 1 301 1 HOH HOH A . H 5 HOH 2 302 2 HOH HOH A . H 5 HOH 3 303 3 HOH HOH A . H 5 HOH 4 304 4 HOH HOH A . H 5 HOH 5 305 5 HOH HOH A . H 5 HOH 6 306 6 HOH HOH A . H 5 HOH 7 307 7 HOH HOH A . H 5 HOH 8 308 8 HOH HOH A . H 5 HOH 9 309 9 HOH HOH A . H 5 HOH 10 310 10 HOH HOH A . H 5 HOH 11 311 11 HOH HOH A . H 5 HOH 12 312 12 HOH HOH A . H 5 HOH 13 313 13 HOH HOH A . H 5 HOH 14 314 14 HOH HOH A . H 5 HOH 15 315 15 HOH HOH A . H 5 HOH 16 316 16 HOH HOH A . H 5 HOH 17 317 17 HOH HOH A . H 5 HOH 18 318 18 HOH HOH A . H 5 HOH 19 319 19 HOH HOH A . H 5 HOH 20 320 20 HOH HOH A . H 5 HOH 21 321 21 HOH HOH A . H 5 HOH 22 322 22 HOH HOH A . H 5 HOH 23 323 23 HOH HOH A . H 5 HOH 24 324 24 HOH HOH A . H 5 HOH 25 325 25 HOH HOH A . H 5 HOH 26 326 26 HOH HOH A . H 5 HOH 27 327 27 HOH HOH A . H 5 HOH 28 328 28 HOH HOH A . H 5 HOH 29 329 29 HOH HOH A . H 5 HOH 30 330 30 HOH HOH A . H 5 HOH 31 331 31 HOH HOH A . H 5 HOH 32 332 32 HOH HOH A . H 5 HOH 33 333 33 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 HKL2Map 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 HKL2Map phasing . ? 6 # _cell.entry_id 4QLM _cell.length_a 78.767 _cell.length_b 87.975 _cell.length_c 145.235 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QLM _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4QLM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.11 _exptl_crystal.density_percent_sol 60.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range 8.7-9.2 _exptl_crystal_grow.pdbx_details '0.1 M Na-Bicine, pH 8.7-9.2 and 2.6-3.2 M (NH4)2SO4, VAPOR DIFFUSION, SITTING DROP, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-E' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-E _diffrn_source.pdbx_wavelength 0.9792 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4QLM _reflns.observed_criterion_sigma_I 1.200 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.721 _reflns.number_obs 13840 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4QLM _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12971 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.64 _refine.ls_d_res_high 2.721 _refine.ls_percent_reflns_obs 98.9 _refine.ls_R_factor_obs 0.215 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.213 _refine.ls_R_factor_R_free 0.244 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.870 _refine.ls_number_reflns_R_free 690 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.450 _refine.pdbx_overall_phase_error 32.970 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 0 _refine_hist.pdbx_number_atoms_nucleic_acid 2316 _refine_hist.pdbx_number_atoms_ligand 100 _refine_hist.number_atoms_solvent 33 _refine_hist.number_atoms_total 2449 _refine_hist.d_res_high 2.721 _refine_hist.d_res_low 45.64 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.010 ? ? 2730 'X-RAY DIFFRACTION' ? f_angle_d 1.698 ? ? 4254 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 21.219 ? ? 1324 'X-RAY DIFFRACTION' ? f_chiral_restr 0.057 ? ? 560 'X-RAY DIFFRACTION' ? f_plane_restr 0.007 ? ? 113 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.6919 2.8997 2566 0.3904 96.00 0.4144 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.8997 3.1914 2668 0.2951 100.00 0.3348 . . 142 . . . . 'X-RAY DIFFRACTION' . 3.1914 3.6530 2723 0.2192 100.00 0.2648 . . 128 . . . . 'X-RAY DIFFRACTION' . 3.6530 4.6018 2727 0.1939 100.00 0.2389 . . 136 . . . . 'X-RAY DIFFRACTION' . 4.6018 45.6491 2795 0.1904 99.00 0.2067 . . 148 . . . . # _database_PDB_matrix.entry_id 4QLM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4QLM _struct.title 'ydao riboswitch binding to c-di-AMP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QLM _struct_keywords.pdbx_keywords RNA _struct_keywords.text 'second message molecule, c-di-AMP binding, RNA' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4QLM _struct_ref.pdbx_db_accession 4QLM _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4QLM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 125 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4QLM _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 125 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 125 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'AUTHORS HAVE INDICATED THAT THE BIOLOGICAL UNIT IS UNKNOWN.' # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A G 28 OP2 ? ? ? 1_555 B MG . MG ? ? A G 28 A MG 201 1_555 ? ? ? ? ? ? ? 2.002 ? ? metalc2 metalc ? ? A A 73 "O4'" ? ? ? 1_555 C MG . MG ? ? A A 73 A MG 202 1_555 ? ? ? ? ? ? ? 2.403 ? ? metalc3 metalc ? ? A G 96 OP1 ? ? ? 1_555 B MG . MG ? ? A G 96 A MG 201 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc4 metalc ? ? A C 97 OP2 ? ? ? 1_555 B MG . MG ? ? A C 97 A MG 201 1_555 ? ? ? ? ? ? ? 2.148 ? ? metalc5 metalc ? ? A U 98 O4 ? ? ? 1_555 B MG . MG ? ? A U 98 A MG 201 1_555 ? ? ? ? ? ? ? 2.091 ? ? metalc6 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 201 A HOH 331 1_555 ? ? ? ? ? ? ? 2.068 ? ? metalc7 metalc ? ? B MG . MG ? ? ? 1_555 H HOH . O ? ? A MG 201 A HOH 332 1_555 ? ? ? ? ? ? ? 2.050 ? ? hydrog1 hydrog ? ? A C 5 O2 ? ? ? 1_555 A A 73 N6 ? ? A C 5 A A 73 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog2 hydrog ? ? A C 5 N3 ? ? ? 1_555 A G 111 N1 ? ? A C 5 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A C 5 N4 ? ? ? 1_555 A G 111 O6 ? ? A C 5 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A C 5 O2 ? ? ? 1_555 A G 111 N2 ? ? A C 5 A G 111 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A G 6 N1 ? ? ? 1_555 A C 110 N3 ? ? A G 6 A C 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A G 6 N2 ? ? ? 1_555 A C 110 O2 ? ? A G 6 A C 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A G 6 O6 ? ? ? 1_555 A C 110 N4 ? ? A G 6 A C 110 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A C 7 N3 ? ? ? 1_555 A G 109 N1 ? ? A C 7 A G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A C 7 N4 ? ? ? 1_555 A G 109 O6 ? ? A C 7 A G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A C 7 O2 ? ? ? 1_555 A G 109 N2 ? ? A C 7 A G 109 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A U 8 N3 ? ? ? 1_555 A A 108 N1 ? ? A U 8 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A U 8 O4 ? ? ? 1_555 A A 108 N6 ? ? A U 8 A A 108 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A G 9 N2 ? ? ? 1_555 A A 107 N7 ? ? A G 9 A A 107 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog14 hydrog ? ? A G 9 N3 ? ? ? 1_555 A A 107 N6 ? ? A G 9 A A 107 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog15 hydrog ? ? A A 10 N3 ? ? ? 1_555 A G 105 N2 ? ? A A 10 A G 105 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog16 hydrog ? ? A G 22 N1 ? ? ? 1_555 A C 106 N3 ? ? A G 22 A C 106 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog17 hydrog ? ? A C 23 O2 ? ? ? 1_555 A G 105 N2 ? ? A C 23 A G 105 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog18 hydrog ? ? A G 24 N1 ? ? ? 1_555 A C 104 N3 ? ? A G 24 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A G 24 N2 ? ? ? 1_555 A C 104 O2 ? ? A G 24 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A G 24 O6 ? ? ? 1_555 A C 104 N4 ? ? A G 24 A C 104 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A G 25 N1 ? ? ? 1_555 A U 103 O2 ? ? A G 25 A U 103 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog22 hydrog ? ? A G 25 O6 ? ? ? 1_555 A U 103 N3 ? ? A G 25 A U 103 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog23 hydrog ? ? A G 26 N1 ? ? ? 1_555 A C 102 N3 ? ? A G 26 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A G 26 N2 ? ? ? 1_555 A C 102 O2 ? ? A G 26 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A G 26 O6 ? ? ? 1_555 A C 102 N4 ? ? A G 26 A C 102 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A G 27 N1 ? ? ? 1_555 A C 101 N3 ? ? A G 27 A C 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A G 27 N2 ? ? ? 1_555 A C 101 O2 ? ? A G 27 A C 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A G 27 O6 ? ? ? 1_555 A C 101 N4 ? ? A G 27 A C 101 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A G 28 N2 ? ? ? 1_555 A A 100 N7 ? ? A G 28 A A 100 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog30 hydrog ? ? A G 28 N3 ? ? ? 1_555 A A 100 N6 ? ? A G 28 A A 100 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog31 hydrog ? ? A C 31 N4 ? ? ? 1_555 A C 97 O2 ? ? A C 31 A C 97 1_555 ? ? ? ? ? ? 'C-C MISPAIR' ? ? ? hydrog32 hydrog ? ? A C 32 N3 ? ? ? 1_555 A G 96 N1 ? ? A C 32 A G 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A C 32 N4 ? ? ? 1_555 A G 96 O6 ? ? A C 32 A G 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A C 32 O2 ? ? ? 1_555 A G 96 N2 ? ? A C 32 A G 96 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A G 39 O6 ? ? ? 1_555 A G 92 N2 ? ? A G 39 A G 92 1_555 ? ? ? ? ? ? 'G-G MISPAIR' ? ? ? hydrog36 hydrog ? ? A G 39 N1 ? ? ? 1_555 A C 94 N3 ? ? A G 39 A C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A G 39 N2 ? ? ? 1_555 A C 94 O2 ? ? A G 39 A C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A G 39 O6 ? ? ? 1_555 A C 94 N4 ? ? A G 39 A C 94 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A G 40 N1 ? ? ? 1_555 A C 91 N3 ? ? A G 40 A C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A G 40 N2 ? ? ? 1_555 A C 91 O2 ? ? A G 40 A C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A G 40 O6 ? ? ? 1_555 A C 91 N4 ? ? A G 40 A C 91 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A G 41 N1 ? ? ? 1_555 A C 90 N3 ? ? A G 41 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A G 41 N2 ? ? ? 1_555 A C 90 O2 ? ? A G 41 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A G 41 O6 ? ? ? 1_555 A C 90 N4 ? ? A G 41 A C 90 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A G 42 N1 ? ? ? 1_555 A C 89 N3 ? ? A G 42 A C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A G 42 N2 ? ? ? 1_555 A C 89 O2 ? ? A G 42 A C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A G 42 O6 ? ? ? 1_555 A C 89 N4 ? ? A G 42 A C 89 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A C 43 N3 ? ? ? 1_555 A G 88 N1 ? ? A C 43 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A C 43 N4 ? ? ? 1_555 A G 88 O6 ? ? A C 43 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? A C 43 O2 ? ? ? 1_555 A G 88 N2 ? ? A C 43 A G 88 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? A G 44 N2 ? ? ? 1_555 A A 87 N7 ? ? A G 44 A A 87 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog52 hydrog ? ? A G 44 N3 ? ? ? 1_555 A A 87 N6 ? ? A G 44 A A 87 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog53 hydrog ? ? A A 45 N3 ? ? ? 1_555 A G 68 N2 ? ? A A 45 A G 68 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog54 hydrog ? ? A U 47 N3 ? ? ? 1_555 A U 66 O2 ? ? A U 47 A U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog55 hydrog ? ? A U 47 O4 ? ? ? 1_555 A U 66 N3 ? ? A U 47 A U 66 1_555 ? ? ? ? ? ? TYPE_16_PAIR ? ? ? hydrog56 hydrog ? ? A C 48 N3 ? ? ? 1_555 A G 65 N1 ? ? A C 48 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? A C 48 N4 ? ? ? 1_555 A G 65 O6 ? ? A C 48 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? A C 48 O2 ? ? ? 1_555 A G 65 N2 ? ? A C 48 A G 65 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? A U 49 N3 ? ? ? 1_555 A A 64 N1 ? ? A U 49 A A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? A U 49 O4 ? ? ? 1_555 A A 64 N6 ? ? A U 49 A A 64 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? A C 50 N3 ? ? ? 1_555 A G 63 N1 ? ? A C 50 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? A C 50 N4 ? ? ? 1_555 A G 63 O6 ? ? A C 50 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? A C 50 O2 ? ? ? 1_555 A G 63 N2 ? ? A C 50 A G 63 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? A U 51 N3 ? ? ? 1_555 A A 62 N1 ? ? A U 51 A A 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? A U 51 O4 ? ? ? 1_555 A A 62 N6 ? ? A U 51 A A 62 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? A U 52 N3 ? ? ? 1_555 A A 61 N1 ? ? A U 52 A A 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? A U 52 O4 ? ? ? 1_555 A A 61 N6 ? ? A U 52 A A 61 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? A C 53 O2 ? ? ? 1_555 A G 60 N2 ? ? A C 53 A G 60 1_555 ? ? ? ? ? ? 'C-G PAIR' ? ? ? hydrog69 hydrog ? ? A C 54 N3 ? ? ? 1_555 A G 59 N1 ? ? A C 54 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog70 hydrog ? ? A C 54 N4 ? ? ? 1_555 A G 59 O6 ? ? A C 54 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog71 hydrog ? ? A C 54 O2 ? ? ? 1_555 A G 59 N2 ? ? A C 54 A G 59 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog72 hydrog ? ? A G 55 N2 ? ? ? 1_555 A A 58 N7 ? ? A G 55 A A 58 1_555 ? ? ? ? ? ? 'G-A MISPAIR' ? ? ? hydrog73 hydrog ? ? A A 67 N6 ? ? ? 1_555 A G 86 N3 ? ? A A 67 A G 86 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog74 hydrog ? ? A A 67 N7 ? ? ? 1_555 A G 86 N2 ? ? A A 67 A G 86 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog75 hydrog ? ? A G 68 N1 ? ? ? 1_555 A C 85 N3 ? ? A G 68 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog76 hydrog ? ? A G 68 N2 ? ? ? 1_555 A C 85 O2 ? ? A G 68 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog77 hydrog ? ? A G 68 O6 ? ? ? 1_555 A C 85 N4 ? ? A G 68 A C 85 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog78 hydrog ? ? A G 69 N1 ? ? ? 1_555 A C 84 N3 ? ? A G 69 A C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog79 hydrog ? ? A G 69 N2 ? ? ? 1_555 A C 84 O2 ? ? A G 69 A C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog80 hydrog ? ? A G 69 O6 ? ? ? 1_555 A C 84 N4 ? ? A G 69 A C 84 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog81 hydrog ? ? A G 70 N1 ? ? ? 1_555 A C 83 N3 ? ? A G 70 A C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog82 hydrog ? ? A G 70 N2 ? ? ? 1_555 A C 83 O2 ? ? A G 70 A C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog83 hydrog ? ? A G 70 O6 ? ? ? 1_555 A C 83 N4 ? ? A G 70 A C 83 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog84 hydrog ? ? A U 71 N3 ? ? ? 1_555 A A 82 N1 ? ? A U 71 A A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog85 hydrog ? ? A U 71 O4 ? ? ? 1_555 A A 82 N6 ? ? A U 71 A A 82 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog86 hydrog ? ? A U 72 N3 ? ? ? 1_555 A G 81 O6 ? ? A U 72 A G 81 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog87 hydrog ? ? A U 72 O2 ? ? ? 1_555 A G 81 N1 ? ? A U 72 A G 81 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog88 hydrog ? ? A A 73 N6 ? ? ? 1_555 A U 112 O4 ? ? A A 73 A U 112 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog89 hydrog ? ? A A 73 N7 ? ? ? 1_555 A U 112 N3 ? ? A A 73 A U 112 1_555 ? ? ? ? ? ? HOOGSTEEN ? ? ? hydrog90 hydrog ? ? A C 74 N3 ? ? ? 1_555 A G 121 N1 ? ? A C 74 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog91 hydrog ? ? A C 74 N4 ? ? ? 1_555 A G 121 O6 ? ? A C 74 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog92 hydrog ? ? A C 74 O2 ? ? ? 1_555 A G 121 N2 ? ? A C 74 A G 121 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog93 hydrog ? ? A U 75 N3 ? ? ? 1_555 A A 120 N1 ? ? A U 75 A A 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog94 hydrog ? ? A U 75 O4 ? ? ? 1_555 A A 120 N6 ? ? A U 75 A A 120 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog95 hydrog ? ? A C 76 N3 ? ? ? 1_555 A G 119 N1 ? ? A C 76 A G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog96 hydrog ? ? A C 76 N4 ? ? ? 1_555 A G 119 O6 ? ? A C 76 A G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog97 hydrog ? ? A C 76 O2 ? ? ? 1_555 A G 119 N2 ? ? A C 76 A G 119 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog98 hydrog ? ? A C 77 N3 ? ? ? 1_555 A G 118 N1 ? ? A C 77 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog99 hydrog ? ? A C 77 N4 ? ? ? 1_555 A G 118 O6 ? ? A C 77 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog100 hydrog ? ? A C 77 O2 ? ? ? 1_555 A G 118 N2 ? ? A C 77 A G 118 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog101 hydrog ? ? A U 78 N3 ? ? ? 1_555 A A 117 N1 ? ? A U 78 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog102 hydrog ? ? A U 78 O4 ? ? ? 1_555 A A 117 N6 ? ? A U 78 A A 117 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog103 hydrog ? ? A U 79 N3 ? ? ? 1_555 A A 116 N1 ? ? A U 79 A A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog104 hydrog ? ? A U 79 O4 ? ? ? 1_555 A A 116 N6 ? ? A U 79 A A 116 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog105 hydrog ? ? A C 80 N3 ? ? ? 1_555 A G 115 N1 ? ? A C 80 A G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog106 hydrog ? ? A C 80 N4 ? ? ? 1_555 A G 115 O6 ? ? A C 80 A G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog107 hydrog ? ? A C 80 O2 ? ? ? 1_555 A G 115 N2 ? ? A C 80 A G 115 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog108 hydrog ? ? A C 91 O2 ? ? ? 1_555 A A 95 N6 ? ? A C 91 A A 95 1_555 ? ? ? ? ? ? 'C-A MISPAIR' ? ? ? hydrog109 hydrog ? ? A G 92 N3 ? ? ? 1_555 A C 94 N4 ? ? A G 92 A C 94 1_555 ? ? ? ? ? ? 'G-C PAIR' ? ? ? hydrog110 hydrog ? ? A G 111 N2 ? ? ? 1_555 A U 112 O4 ? ? A G 111 A U 112 1_555 ? ? ? ? ? ? 'G-U MISPAIR' ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OP2 ? A G 28 ? A G 28 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 OP1 ? A G 96 ? A G 96 ? 1_555 95.0 ? 2 OP2 ? A G 28 ? A G 28 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 OP2 ? A C 97 ? A C 97 ? 1_555 153.4 ? 3 OP1 ? A G 96 ? A G 96 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 OP2 ? A C 97 ? A C 97 ? 1_555 71.0 ? 4 OP2 ? A G 28 ? A G 28 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O4 ? A U 98 ? A U 98 ? 1_555 93.5 ? 5 OP1 ? A G 96 ? A G 96 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O4 ? A U 98 ? A U 98 ? 1_555 116.0 ? 6 OP2 ? A C 97 ? A C 97 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O4 ? A U 98 ? A U 98 ? 1_555 112.9 ? 7 OP2 ? A G 28 ? A G 28 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 331 ? 1_555 83.1 ? 8 OP1 ? A G 96 ? A G 96 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 331 ? 1_555 51.1 ? 9 OP2 ? A C 97 ? A C 97 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 331 ? 1_555 103.3 ? 10 O4 ? A U 98 ? A U 98 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 331 ? 1_555 67.4 ? 11 OP2 ? A G 28 ? A G 28 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 332 ? 1_555 91.3 ? 12 OP1 ? A G 96 ? A G 96 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 332 ? 1_555 145.7 ? 13 OP2 ? A C 97 ? A C 97 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 332 ? 1_555 88.8 ? 14 O4 ? A U 98 ? A U 98 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 332 ? 1_555 97.1 ? 15 O ? H HOH . ? A HOH 331 ? 1_555 MG ? B MG . ? A MG 201 ? 1_555 O ? H HOH . ? A HOH 332 ? 1_555 163.1 ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 201 ? 6 'BINDING SITE FOR RESIDUE MG A 201' AC2 Software A MG 202 ? 3 'BINDING SITE FOR RESIDUE MG A 202' AC3 Software A 2BA 203 ? 15 'BINDING SITE FOR RESIDUE 2BA A 203' AC4 Software A 2BA 204 ? 14 'BINDING SITE FOR RESIDUE 2BA A 204' AC5 Software A SO4 205 ? 3 'BINDING SITE FOR RESIDUE SO4 A 205' AC6 Software A SO4 206 ? 2 'BINDING SITE FOR RESIDUE SO4 A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 G A 28 ? G A 28 . ? 1_555 ? 2 AC1 6 G A 96 ? G A 96 . ? 1_555 ? 3 AC1 6 C A 97 ? C A 97 . ? 1_555 ? 4 AC1 6 U A 98 ? U A 98 . ? 1_555 ? 5 AC1 6 HOH H . ? HOH A 331 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH A 332 . ? 1_555 ? 7 AC2 3 U A 72 ? U A 72 . ? 1_555 ? 8 AC2 3 A A 73 ? A A 73 . ? 1_555 ? 9 AC2 3 U A 75 ? U A 75 . ? 1_555 ? 10 AC3 15 G A 6 ? G A 6 . ? 1_555 ? 11 AC3 15 C A 7 ? C A 7 . ? 1_555 ? 12 AC3 15 U A 8 ? U A 8 . ? 1_555 ? 13 AC3 15 G A 9 ? G A 9 . ? 1_555 ? 14 AC3 15 A A 45 ? A A 45 . ? 1_555 ? 15 AC3 15 G A 69 ? G A 69 . ? 1_555 ? 16 AC3 15 G A 70 ? G A 70 . ? 1_555 ? 17 AC3 15 U A 71 ? U A 71 . ? 1_555 ? 18 AC3 15 U A 72 ? U A 72 . ? 1_555 ? 19 AC3 15 C A 84 ? C A 84 . ? 1_555 ? 20 AC3 15 C A 85 ? C A 85 . ? 1_555 ? 21 AC3 15 G A 109 ? G A 109 . ? 1_555 ? 22 AC3 15 C A 110 ? C A 110 . ? 1_555 ? 23 AC3 15 G A 111 ? G A 111 . ? 1_555 ? 24 AC3 15 U A 112 ? U A 112 . ? 1_555 ? 25 AC4 14 A A 10 ? A A 10 . ? 1_555 ? 26 AC4 14 G A 24 ? G A 24 . ? 1_555 ? 27 AC4 14 G A 25 ? G A 25 . ? 1_555 ? 28 AC4 14 G A 26 ? G A 26 . ? 1_555 ? 29 AC4 14 G A 27 ? G A 27 . ? 1_555 ? 30 AC4 14 G A 41 ? G A 41 . ? 1_555 ? 31 AC4 14 G A 42 ? G A 42 . ? 1_555 ? 32 AC4 14 C A 43 ? C A 43 . ? 1_555 ? 33 AC4 14 G A 44 ? G A 44 . ? 1_555 ? 34 AC4 14 C A 90 ? C A 90 . ? 1_555 ? 35 AC4 14 C A 91 ? C A 91 . ? 1_555 ? 36 AC4 14 A A 95 ? A A 95 . ? 1_555 ? 37 AC4 14 C A 104 ? C A 104 . ? 1_555 ? 38 AC4 14 G A 105 ? G A 105 . ? 1_555 ? 39 AC5 3 HOH H . ? HOH A 305 . ? 1_555 ? 40 AC5 3 HOH H . ? HOH A 314 . ? 1_555 ? 41 AC5 3 HOH H . ? HOH A 325 . ? 1_555 ? 42 AC6 2 HOH H . ? HOH A 302 . ? 1_555 ? 43 AC6 2 HOH H . ? HOH A 320 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OP1 A G 96 ? ? O A HOH 331 ? ? 1.79 2 1 OP2 A A 11 ? ? O A HOH 301 ? ? 2.02 3 1 O A HOH 316 ? ? O A HOH 322 ? ? 2.02 4 1 O2 A C 90 ? ? "O2'1" A 2BA 204 ? ? 2.04 5 1 O4 A SO4 206 ? ? O A HOH 302 ? ? 2.08 6 1 O2 A C 84 ? ? "O2'" A 2BA 203 ? ? 2.16 7 1 O2 A C 104 ? ? "O2'" A 2BA 204 ? ? 2.17 8 1 O2 A C 110 ? ? "O2'1" A 2BA 203 ? ? 2.17 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 311 ? ? 1_555 O A HOH 319 ? ? 3_554 2.05 2 1 O A HOH 323 ? ? 1_555 O A HOH 326 ? ? 3_554 2.10 3 1 O A HOH 327 ? ? 1_555 O A HOH 330 ? ? 3_554 2.14 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 N1 A C 12 ? ? C2 A C 12 ? ? O2 A C 12 ? ? 123.63 118.90 4.73 0.60 N 2 1 N3 A C 12 ? ? C2 A C 12 ? ? O2 A C 12 ? ? 116.84 121.90 -5.06 0.70 N 3 1 "O5'" A G 86 ? ? P A G 86 ? ? OP2 A G 86 ? ? 99.88 105.70 -5.82 0.90 N 4 1 C5 A C 94 ? ? C6 A C 94 ? ? N1 A C 94 ? ? 124.05 121.00 3.05 0.50 N 5 1 C2 A C 94 ? ? N1 A C 94 ? ? "C1'" A C 94 ? ? 126.86 118.80 8.06 1.10 N 6 1 C6 A C 114 ? ? N1 A C 114 ? ? C2 A C 114 ? ? 117.19 120.30 -3.11 0.40 N 7 1 N1 A C 114 ? ? C2 A C 114 ? ? O2 A C 114 ? ? 123.01 118.90 4.11 0.60 N 8 1 N3 A C 114 ? ? C2 A C 114 ? ? O2 A C 114 ? ? 117.55 121.90 -4.35 0.70 N # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 6.8744 _pdbx_refine_tls.origin_y 30.0921 _pdbx_refine_tls.origin_z -16.4253 _pdbx_refine_tls.T[1][1] 0.5715 _pdbx_refine_tls.T[2][2] 0.8722 _pdbx_refine_tls.T[3][3] 0.7221 _pdbx_refine_tls.T[1][2] 0.0629 _pdbx_refine_tls.T[1][3] -0.1144 _pdbx_refine_tls.T[2][3] -0.3618 _pdbx_refine_tls.L[1][1] 3.2580 _pdbx_refine_tls.L[2][2] 0.9930 _pdbx_refine_tls.L[3][3] 2.4297 _pdbx_refine_tls.L[1][2] -0.3108 _pdbx_refine_tls.L[1][3] 1.1355 _pdbx_refine_tls.L[2][3] -0.4407 _pdbx_refine_tls.S[1][1] -0.1210 _pdbx_refine_tls.S[1][2] -0.9047 _pdbx_refine_tls.S[1][3] 0.7806 _pdbx_refine_tls.S[2][1] 0.0647 _pdbx_refine_tls.S[2][2] -0.2260 _pdbx_refine_tls.S[2][3] 0.0830 _pdbx_refine_tls.S[3][1] -0.1386 _pdbx_refine_tls.S[3][2] -0.1881 _pdbx_refine_tls.S[3][3] 0.2949 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A G 1 ? A G 1 2 1 Y 1 A G 2 ? A G 2 3 1 Y 1 A C 13 ? A C 13 4 1 Y 1 A C 14 ? A C 14 5 1 Y 1 A G 15 ? A G 15 6 1 Y 1 A A 16 ? A A 16 7 1 Y 1 A A 17 ? A A 17 8 1 Y 1 A A 18 ? A A 18 9 1 Y 1 A G 19 ? A G 19 10 1 Y 1 A G 20 ? A G 20 11 1 Y 1 A G 21 ? A G 21 12 1 Y 1 A A 35 ? A A 35 13 1 Y 1 A A 36 ? A A 36 14 1 Y 1 A A 37 ? A A 37 15 1 Y 1 A U 38 ? A U 38 16 1 Y 1 A U 124 ? A U 124 17 1 Y 1 A C 125 ? A C 125 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal 2BA P P N R 1 2BA O1P O N N 2 2BA O2P O N N 3 2BA "O5'" O N N 4 2BA "C5'" C N N 5 2BA "C4'" C N R 6 2BA "O4'" O N N 7 2BA "C3'" C N S 8 2BA "O3'" O N N 9 2BA "C2'" C N R 10 2BA "O2'" O N N 11 2BA "C1'" C N R 12 2BA N9 N Y N 13 2BA C8 C Y N 14 2BA N7 N Y N 15 2BA C5 C Y N 16 2BA C6 C Y N 17 2BA N6 N N N 18 2BA N1 N Y N 19 2BA C2 C Y N 20 2BA N3 N Y N 21 2BA C4 C Y N 22 2BA P1 P N R 23 2BA O1P1 O N N 24 2BA O2P1 O N N 25 2BA "O5'1" O N N 26 2BA "C5'1" C N N 27 2BA "C4'1" C N R 28 2BA "O4'1" O N N 29 2BA "C3'1" C N S 30 2BA "O3'1" O N N 31 2BA "C2'1" C N R 32 2BA "O2'1" O N N 33 2BA "C1'1" C N R 34 2BA N91 N Y N 35 2BA C81 C Y N 36 2BA N71 N Y N 37 2BA C51 C Y N 38 2BA C61 C Y N 39 2BA N61 N N N 40 2BA N11 N Y N 41 2BA C21 C Y N 42 2BA N31 N Y N 43 2BA C41 C Y N 44 2BA "H5'" H N N 45 2BA "H5'A" H N N 46 2BA "H4'" H N N 47 2BA "H3'" H N N 48 2BA "H2'" H N N 49 2BA "HO2'" H N N 50 2BA "H1'" H N N 51 2BA H8 H N N 52 2BA HN6 H N N 53 2BA HN6A H N N 54 2BA H2 H N N 55 2BA "HC5'" H N N 56 2BA HC5A H N N 57 2BA "HC4'" H N N 58 2BA "HC3'" H N N 59 2BA "HC2'" H N N 60 2BA HO2A H N N 61 2BA "HC1'" H N N 62 2BA HC8 H N N 63 2BA H1N6 H N N 64 2BA H1NA H N N 65 2BA HC2 H N N 66 2BA H2P H N N 67 2BA H2OP H N N 68 A OP3 O N N 69 A P P N N 70 A OP1 O N N 71 A OP2 O N N 72 A "O5'" O N N 73 A "C5'" C N N 74 A "C4'" C N R 75 A "O4'" O N N 76 A "C3'" C N S 77 A "O3'" O N N 78 A "C2'" C N R 79 A "O2'" O N N 80 A "C1'" C N R 81 A N9 N Y N 82 A C8 C Y N 83 A N7 N Y N 84 A C5 C Y N 85 A C6 C Y N 86 A N6 N N N 87 A N1 N Y N 88 A C2 C Y N 89 A N3 N Y N 90 A C4 C Y N 91 A HOP3 H N N 92 A HOP2 H N N 93 A "H5'" H N N 94 A "H5''" H N N 95 A "H4'" H N N 96 A "H3'" H N N 97 A "HO3'" H N N 98 A "H2'" H N N 99 A "HO2'" H N N 100 A "H1'" H N N 101 A H8 H N N 102 A H61 H N N 103 A H62 H N N 104 A H2 H N N 105 C OP3 O N N 106 C P P N N 107 C OP1 O N N 108 C OP2 O N N 109 C "O5'" O N N 110 C "C5'" C N N 111 C "C4'" C N R 112 C "O4'" O N N 113 C "C3'" C N S 114 C "O3'" O N N 115 C "C2'" C N R 116 C "O2'" O N N 117 C "C1'" C N R 118 C N1 N N N 119 C C2 C N N 120 C O2 O N N 121 C N3 N N N 122 C C4 C N N 123 C N4 N N N 124 C C5 C N N 125 C C6 C N N 126 C HOP3 H N N 127 C HOP2 H N N 128 C "H5'" H N N 129 C "H5''" H N N 130 C "H4'" H N N 131 C "H3'" H N N 132 C "HO3'" H N N 133 C "H2'" H N N 134 C "HO2'" H N N 135 C "H1'" H N N 136 C H41 H N N 137 C H42 H N N 138 C H5 H N N 139 C H6 H N N 140 G OP3 O N N 141 G P P N N 142 G OP1 O N N 143 G OP2 O N N 144 G "O5'" O N N 145 G "C5'" C N N 146 G "C4'" C N R 147 G "O4'" O N N 148 G "C3'" C N S 149 G "O3'" O N N 150 G "C2'" C N R 151 G "O2'" O N N 152 G "C1'" C N R 153 G N9 N Y N 154 G C8 C Y N 155 G N7 N Y N 156 G C5 C Y N 157 G C6 C N N 158 G O6 O N N 159 G N1 N N N 160 G C2 C N N 161 G N2 N N N 162 G N3 N N N 163 G C4 C Y N 164 G HOP3 H N N 165 G HOP2 H N N 166 G "H5'" H N N 167 G "H5''" H N N 168 G "H4'" H N N 169 G "H3'" H N N 170 G "HO3'" H N N 171 G "H2'" H N N 172 G "HO2'" H N N 173 G "H1'" H N N 174 G H8 H N N 175 G H1 H N N 176 G H21 H N N 177 G H22 H N N 178 HOH O O N N 179 HOH H1 H N N 180 HOH H2 H N N 181 MG MG MG N N 182 SO4 S S N N 183 SO4 O1 O N N 184 SO4 O2 O N N 185 SO4 O3 O N N 186 SO4 O4 O N N 187 U OP3 O N N 188 U P P N N 189 U OP1 O N N 190 U OP2 O N N 191 U "O5'" O N N 192 U "C5'" C N N 193 U "C4'" C N R 194 U "O4'" O N N 195 U "C3'" C N S 196 U "O3'" O N N 197 U "C2'" C N R 198 U "O2'" O N N 199 U "C1'" C N R 200 U N1 N N N 201 U C2 C N N 202 U O2 O N N 203 U N3 N N N 204 U C4 C N N 205 U O4 O N N 206 U C5 C N N 207 U C6 C N N 208 U HOP3 H N N 209 U HOP2 H N N 210 U "H5'" H N N 211 U "H5''" H N N 212 U "H4'" H N N 213 U "H3'" H N N 214 U "HO3'" H N N 215 U "H2'" H N N 216 U "HO2'" H N N 217 U "H1'" H N N 218 U H3 H N N 219 U H5 H N N 220 U H6 H N N 221 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal 2BA P O1P doub N N 1 2BA P O2P sing N N 2 2BA P "O5'" sing N N 3 2BA P "O3'1" sing N N 4 2BA "O5'" "C5'" sing N N 5 2BA "C5'" "C4'" sing N N 6 2BA "C4'" "O4'" sing N N 7 2BA "C4'" "C3'" sing N N 8 2BA "O4'" "C1'" sing N N 9 2BA "C3'" "O3'" sing N N 10 2BA "C3'" "C2'" sing N N 11 2BA "O3'" P1 sing N N 12 2BA "C2'" "O2'" sing N N 13 2BA "C2'" "C1'" sing N N 14 2BA "C1'" N9 sing N N 15 2BA N9 C8 sing Y N 16 2BA N9 C4 sing Y N 17 2BA C8 N7 doub Y N 18 2BA N7 C5 sing Y N 19 2BA C5 C6 doub Y N 20 2BA C5 C4 sing Y N 21 2BA C6 N6 sing N N 22 2BA C6 N1 sing Y N 23 2BA N1 C2 doub Y N 24 2BA C2 N3 sing Y N 25 2BA N3 C4 doub Y N 26 2BA P1 O1P1 doub N N 27 2BA P1 O2P1 sing N N 28 2BA P1 "O5'1" sing N N 29 2BA "O5'1" "C5'1" sing N N 30 2BA "C5'1" "C4'1" sing N N 31 2BA "C4'1" "O4'1" sing N N 32 2BA "C4'1" "C3'1" sing N N 33 2BA "O4'1" "C1'1" sing N N 34 2BA "C3'1" "O3'1" sing N N 35 2BA "C3'1" "C2'1" sing N N 36 2BA "C2'1" "O2'1" sing N N 37 2BA "C2'1" "C1'1" sing N N 38 2BA "C1'1" N91 sing N N 39 2BA N91 C81 sing Y N 40 2BA N91 C41 sing Y N 41 2BA C81 N71 doub Y N 42 2BA N71 C51 sing Y N 43 2BA C51 C61 doub Y N 44 2BA C51 C41 sing Y N 45 2BA C61 N61 sing N N 46 2BA C61 N11 sing Y N 47 2BA N11 C21 doub Y N 48 2BA C21 N31 sing Y N 49 2BA N31 C41 doub Y N 50 2BA "C5'" "H5'" sing N N 51 2BA "C5'" "H5'A" sing N N 52 2BA "C4'" "H4'" sing N N 53 2BA "C3'" "H3'" sing N N 54 2BA "C2'" "H2'" sing N N 55 2BA "O2'" "HO2'" sing N N 56 2BA "C1'" "H1'" sing N N 57 2BA C8 H8 sing N N 58 2BA N6 HN6 sing N N 59 2BA N6 HN6A sing N N 60 2BA C2 H2 sing N N 61 2BA "C5'1" "HC5'" sing N N 62 2BA "C5'1" HC5A sing N N 63 2BA "C4'1" "HC4'" sing N N 64 2BA "C3'1" "HC3'" sing N N 65 2BA "C2'1" "HC2'" sing N N 66 2BA "O2'1" HO2A sing N N 67 2BA "C1'1" "HC1'" sing N N 68 2BA C81 HC8 sing N N 69 2BA N61 H1N6 sing N N 70 2BA N61 H1NA sing N N 71 2BA C21 HC2 sing N N 72 2BA O2P H2P sing N N 73 2BA O2P1 H2OP sing N N 74 A OP3 P sing N N 75 A OP3 HOP3 sing N N 76 A P OP1 doub N N 77 A P OP2 sing N N 78 A P "O5'" sing N N 79 A OP2 HOP2 sing N N 80 A "O5'" "C5'" sing N N 81 A "C5'" "C4'" sing N N 82 A "C5'" "H5'" sing N N 83 A "C5'" "H5''" sing N N 84 A "C4'" "O4'" sing N N 85 A "C4'" "C3'" sing N N 86 A "C4'" "H4'" sing N N 87 A "O4'" "C1'" sing N N 88 A "C3'" "O3'" sing N N 89 A "C3'" "C2'" sing N N 90 A "C3'" "H3'" sing N N 91 A "O3'" "HO3'" sing N N 92 A "C2'" "O2'" sing N N 93 A "C2'" "C1'" sing N N 94 A "C2'" "H2'" sing N N 95 A "O2'" "HO2'" sing N N 96 A "C1'" N9 sing N N 97 A "C1'" "H1'" sing N N 98 A N9 C8 sing Y N 99 A N9 C4 sing Y N 100 A C8 N7 doub Y N 101 A C8 H8 sing N N 102 A N7 C5 sing Y N 103 A C5 C6 sing Y N 104 A C5 C4 doub Y N 105 A C6 N6 sing N N 106 A C6 N1 doub Y N 107 A N6 H61 sing N N 108 A N6 H62 sing N N 109 A N1 C2 sing Y N 110 A C2 N3 doub Y N 111 A C2 H2 sing N N 112 A N3 C4 sing Y N 113 C OP3 P sing N N 114 C OP3 HOP3 sing N N 115 C P OP1 doub N N 116 C P OP2 sing N N 117 C P "O5'" sing N N 118 C OP2 HOP2 sing N N 119 C "O5'" "C5'" sing N N 120 C "C5'" "C4'" sing N N 121 C "C5'" "H5'" sing N N 122 C "C5'" "H5''" sing N N 123 C "C4'" "O4'" sing N N 124 C "C4'" "C3'" sing N N 125 C "C4'" "H4'" sing N N 126 C "O4'" "C1'" sing N N 127 C "C3'" "O3'" sing N N 128 C "C3'" "C2'" sing N N 129 C "C3'" "H3'" sing N N 130 C "O3'" "HO3'" sing N N 131 C "C2'" "O2'" sing N N 132 C "C2'" "C1'" sing N N 133 C "C2'" "H2'" sing N N 134 C "O2'" "HO2'" sing N N 135 C "C1'" N1 sing N N 136 C "C1'" "H1'" sing N N 137 C N1 C2 sing N N 138 C N1 C6 sing N N 139 C C2 O2 doub N N 140 C C2 N3 sing N N 141 C N3 C4 doub N N 142 C C4 N4 sing N N 143 C C4 C5 sing N N 144 C N4 H41 sing N N 145 C N4 H42 sing N N 146 C C5 C6 doub N N 147 C C5 H5 sing N N 148 C C6 H6 sing N N 149 G OP3 P sing N N 150 G OP3 HOP3 sing N N 151 G P OP1 doub N N 152 G P OP2 sing N N 153 G P "O5'" sing N N 154 G OP2 HOP2 sing N N 155 G "O5'" "C5'" sing N N 156 G "C5'" "C4'" sing N N 157 G "C5'" "H5'" sing N N 158 G "C5'" "H5''" sing N N 159 G "C4'" "O4'" sing N N 160 G "C4'" "C3'" sing N N 161 G "C4'" "H4'" sing N N 162 G "O4'" "C1'" sing N N 163 G "C3'" "O3'" sing N N 164 G "C3'" "C2'" sing N N 165 G "C3'" "H3'" sing N N 166 G "O3'" "HO3'" sing N N 167 G "C2'" "O2'" sing N N 168 G "C2'" "C1'" sing N N 169 G "C2'" "H2'" sing N N 170 G "O2'" "HO2'" sing N N 171 G "C1'" N9 sing N N 172 G "C1'" "H1'" sing N N 173 G N9 C8 sing Y N 174 G N9 C4 sing Y N 175 G C8 N7 doub Y N 176 G C8 H8 sing N N 177 G N7 C5 sing Y N 178 G C5 C6 sing N N 179 G C5 C4 doub Y N 180 G C6 O6 doub N N 181 G C6 N1 sing N N 182 G N1 C2 sing N N 183 G N1 H1 sing N N 184 G C2 N2 sing N N 185 G C2 N3 doub N N 186 G N2 H21 sing N N 187 G N2 H22 sing N N 188 G N3 C4 sing N N 189 HOH O H1 sing N N 190 HOH O H2 sing N N 191 SO4 S O1 doub N N 192 SO4 S O2 doub N N 193 SO4 S O3 sing N N 194 SO4 S O4 sing N N 195 U OP3 P sing N N 196 U OP3 HOP3 sing N N 197 U P OP1 doub N N 198 U P OP2 sing N N 199 U P "O5'" sing N N 200 U OP2 HOP2 sing N N 201 U "O5'" "C5'" sing N N 202 U "C5'" "C4'" sing N N 203 U "C5'" "H5'" sing N N 204 U "C5'" "H5''" sing N N 205 U "C4'" "O4'" sing N N 206 U "C4'" "C3'" sing N N 207 U "C4'" "H4'" sing N N 208 U "O4'" "C1'" sing N N 209 U "C3'" "O3'" sing N N 210 U "C3'" "C2'" sing N N 211 U "C3'" "H3'" sing N N 212 U "O3'" "HO3'" sing N N 213 U "C2'" "O2'" sing N N 214 U "C2'" "C1'" sing N N 215 U "C2'" "H2'" sing N N 216 U "O2'" "HO2'" sing N N 217 U "C1'" N1 sing N N 218 U "C1'" "H1'" sing N N 219 U N1 C2 sing N N 220 U N1 C6 sing N N 221 U C2 O2 doub N N 222 U C2 N3 sing N N 223 U N3 C4 sing N N 224 U N3 H3 sing N N 225 U C4 O4 doub N N 226 U C4 C5 sing N N 227 U C5 C6 doub N N 228 U C5 H5 sing N N 229 U C6 H6 sing N N 230 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4QLM 'double helix' 4QLM 'a-form double helix' 4QLM tetraloop 4QLM 'bulge loop' 4QLM 'mismatched base pair' 4QLM 'internal loop' 4QLM 'triple helix' 4QLM 'three-way junction' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A C 5 1_555 A G 111 1_555 -0.305 -0.102 0.280 -2.720 -5.825 -2.539 1 A_C5:G111_A A 5 ? A 111 ? 19 1 1 A G 6 1_555 A C 110 1_555 0.815 -0.223 0.033 -2.974 -10.034 -1.568 2 A_G6:C110_A A 6 ? A 110 ? 19 1 1 A C 7 1_555 A G 109 1_555 0.510 -0.325 -0.039 -1.391 -9.892 -1.047 3 A_C7:G109_A A 7 ? A 109 ? 19 1 1 A U 8 1_555 A A 108 1_555 -0.046 -0.023 0.077 12.176 3.907 2.035 4 A_U8:A108_A A 8 ? A 108 ? 20 1 1 A G 9 1_555 A A 107 1_555 6.907 -4.103 0.426 25.879 0.106 1.753 5 A_G9:A107_A A 9 ? A 107 ? 11 9 1 A G 22 1_555 A C 106 1_555 0.341 0.074 -0.671 -2.104 24.830 7.773 6 A_G22:C106_A A 22 ? A 106 ? ? 1 1 A C 23 1_555 A G 105 1_555 -0.110 -0.088 -0.472 4.037 8.519 0.236 7 A_C23:G105_A A 23 ? A 105 ? 19 1 1 A G 24 1_555 A C 104 1_555 0.180 0.009 -0.313 -8.633 -11.284 -1.224 8 A_G24:C104_A A 24 ? A 104 ? 19 1 1 A G 25 1_555 A U 103 1_555 -2.053 -0.487 -0.728 -13.970 -9.551 0.070 9 A_G25:U103_A A 25 ? A 103 ? 28 1 1 A G 26 1_555 A C 102 1_555 -0.253 -0.234 -0.170 -3.907 -8.670 2.929 10 A_G26:C102_A A 26 ? A 102 ? 19 1 1 A G 27 1_555 A C 101 1_555 -0.553 -0.222 0.170 -1.676 -7.135 -0.694 11 A_G27:C101_A A 27 ? A 101 ? 19 1 1 A G 28 1_555 A A 100 1_555 6.912 -3.928 -0.440 -1.801 -0.923 -0.752 12 A_G28:A100_A A 28 ? A 100 ? 11 9 1 A C 31 1_555 A C 97 1_555 -3.689 -1.295 0.325 5.793 -12.306 9.393 13 A_C31:C97_A A 31 ? A 97 ? ? ? 1 A C 32 1_555 A G 96 1_555 -0.598 -0.040 -0.651 13.852 -11.156 -0.499 14 A_C32:G96_A A 32 ? A 96 ? 19 1 1 A G 39 1_555 A C 94 1_555 -0.056 -0.170 -0.773 -8.718 -13.268 -1.719 15 A_G39:C94_A A 39 ? A 94 ? 19 1 1 A G 40 1_555 A C 91 1_555 0.126 -0.191 0.064 1.255 6.587 1.007 16 A_G40:C91_A A 40 ? A 91 ? 19 1 1 A G 41 1_555 A C 90 1_555 0.205 -0.052 -0.298 -1.787 -0.865 -0.005 17 A_G41:C90_A A 41 ? A 90 ? 19 1 1 A G 42 1_555 A C 89 1_555 -0.186 -0.250 -0.332 -6.092 0.847 -1.127 18 A_G42:C89_A A 42 ? A 89 ? 19 1 1 A C 43 1_555 A G 88 1_555 0.348 -0.278 -0.224 6.500 3.727 -1.988 19 A_C43:G88_A A 43 ? A 88 ? 19 1 1 A G 44 1_555 A A 87 1_555 6.563 -3.733 0.604 22.474 5.211 0.420 20 A_G44:A87_A A 44 ? A 87 ? 11 9 1 A A 58 1_555 A G 55 1_555 -7.699 -5.167 0.333 -13.148 0.328 -18.025 21 A_A58:G55_A A 58 ? A 55 ? ? 10 1 A G 59 1_555 A C 54 1_555 0.306 -0.054 -0.654 -3.642 5.610 3.495 22 A_G59:C54_A A 59 ? A 54 ? 19 1 1 A G 60 1_555 A C 53 1_555 -0.250 0.412 -0.516 -10.456 -17.805 9.382 23 A_G60:C53_A A 60 ? A 53 ? ? 1 1 A A 61 1_555 A U 52 1_555 0.502 -0.238 0.125 1.121 -15.568 3.560 24 A_A61:U52_A A 61 ? A 52 ? 20 1 1 A A 62 1_555 A U 51 1_555 0.501 -0.155 0.122 -2.765 -11.342 -1.449 25 A_A62:U51_A A 62 ? A 51 ? 20 1 1 A G 63 1_555 A C 50 1_555 0.336 -0.016 -0.162 -8.760 -9.181 1.683 26 A_G63:C50_A A 63 ? A 50 ? 19 1 1 A A 64 1_555 A U 49 1_555 0.937 0.256 0.187 1.397 -7.616 0.760 27 A_A64:U49_A A 64 ? A 49 ? 20 1 1 A G 65 1_555 A C 48 1_555 -0.096 -0.070 -0.121 2.279 -1.575 3.204 28 A_G65:C48_A A 65 ? A 48 ? 19 1 1 A U 66 1_555 A U 47 1_555 2.620 -1.850 -0.023 1.319 -20.122 10.747 29 A_U66:U47_A A 66 ? A 47 ? 16 1 1 A A 67 1_555 A G 86 1_555 -6.971 -4.158 -0.152 -6.367 -6.349 -5.505 30 A_A67:G86_A A 67 ? A 86 ? 11 10 1 A G 68 1_555 A C 85 1_555 -0.223 -0.177 -0.506 -12.147 -5.429 0.950 31 A_G68:C85_A A 68 ? A 85 ? 19 1 1 A G 69 1_555 A C 84 1_555 -0.189 -0.312 -0.129 -15.016 -13.521 -1.155 32 A_G69:C84_A A 69 ? A 84 ? 19 1 1 A G 70 1_555 A C 83 1_555 -0.085 -0.073 -0.064 -6.995 -15.795 1.313 33 A_G70:C83_A A 70 ? A 83 ? 19 1 1 A U 71 1_555 A A 82 1_555 -0.494 0.061 -0.175 1.587 -17.797 3.575 34 A_U71:A82_A A 71 ? A 82 ? 20 1 1 A U 72 1_555 A G 81 1_555 1.916 -0.466 -0.106 4.446 -7.543 0.555 35 A_U72:G81_A A 72 ? A 81 ? 28 1 1 A G 115 1_555 A C 80 1_555 -0.269 -0.294 -0.589 -2.586 -10.572 -4.660 36 A_G115:C80_A A 115 ? A 80 ? 19 1 1 A A 116 1_555 A U 79 1_555 0.164 -0.076 -0.569 -5.487 -13.402 7.247 37 A_A116:U79_A A 116 ? A 79 ? 20 1 1 A A 117 1_555 A U 78 1_555 0.025 -0.068 -0.295 -9.244 -4.970 6.774 38 A_A117:U78_A A 117 ? A 78 ? 20 1 1 A G 118 1_555 A C 77 1_555 -0.090 0.112 -0.009 -0.339 -0.978 2.122 39 A_G118:C77_A A 118 ? A 77 ? 19 1 1 A G 119 1_555 A C 76 1_555 0.110 -0.240 -0.017 -4.607 4.990 -2.639 40 A_G119:C76_A A 119 ? A 76 ? 19 1 1 A A 120 1_555 A U 75 1_555 0.311 -0.099 -0.293 2.612 -10.231 -6.396 41 A_A120:U75_A A 120 ? A 75 ? 20 1 1 A G 121 1_555 A C 74 1_555 -0.189 -0.198 -0.878 -22.548 -18.690 1.576 42 A_G121:C74_A A 121 ? A 74 ? 19 1 1 A A 73 1_555 A U 112 1_555 1.294 -3.716 -1.509 20.961 -6.130 74.044 43 A_A73:U112_A A 73 ? A 112 ? 23 3 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A C 5 1_555 A G 111 1_555 A G 6 1_555 A C 110 1_555 0.784 -2.527 3.159 1.850 4.174 32.419 -5.150 -1.095 2.860 7.430 -3.292 32.731 1 AA_C5G6:C110G111_AA A 5 ? A 111 ? A 6 ? A 110 ? 1 A G 6 1_555 A C 110 1_555 A C 7 1_555 A G 109 1_555 -1.362 -2.437 3.100 -1.789 4.781 22.841 -7.454 2.818 2.639 11.882 4.446 23.397 2 AA_G6C7:G109C110_AA A 6 ? A 110 ? A 7 ? A 109 ? 1 A C 7 1_555 A G 109 1_555 A U 8 1_555 A A 108 1_555 -0.724 -1.776 3.017 -3.789 5.922 25.214 -5.334 0.696 2.617 13.241 8.472 26.161 3 AA_C7U8:A108G109_AA A 7 ? A 109 ? A 8 ? A 108 ? 1 A U 8 1_555 A A 108 1_555 A G 9 1_555 A A 107 1_555 -0.141 -0.350 3.191 -0.194 3.799 56.944 -0.570 0.138 3.164 3.980 0.203 57.060 4 AA_U8G9:A107A108_AA A 8 ? A 108 ? A 9 ? A 107 ? 1 A G 22 1_555 A C 106 1_555 A C 23 1_555 A G 105 1_555 -0.974 -2.149 3.276 -1.144 8.602 20.462 -8.439 2.148 2.247 22.928 3.049 22.208 5 AA_G22C23:G105C106_AA A 22 ? A 106 ? A 23 ? A 105 ? 1 A C 23 1_555 A G 105 1_555 A G 24 1_555 A C 104 1_555 0.134 -2.056 3.793 -1.350 2.190 33.665 -3.945 -0.480 3.648 3.775 2.327 33.761 6 AA_C23G24:C104G105_AA A 23 ? A 105 ? A 24 ? A 104 ? 1 A G 24 1_555 A C 104 1_555 A G 25 1_555 A U 103 1_555 -0.004 -2.053 3.472 -0.848 4.902 21.391 -7.269 -0.313 2.931 12.982 2.245 21.955 7 AA_G24G25:U103C104_AA A 24 ? A 104 ? A 25 ? A 103 ? 1 A G 25 1_555 A U 103 1_555 A G 26 1_555 A C 102 1_555 -0.086 -1.349 3.167 -5.486 1.458 37.682 -2.245 -0.538 3.096 2.242 8.435 38.091 8 AA_G25G26:C102U103_AA A 25 ? A 103 ? A 26 ? A 102 ? 1 A G 26 1_555 A C 102 1_555 A G 27 1_555 A C 101 1_555 0.318 -2.093 3.299 -0.197 -4.537 25.977 -3.301 -0.753 3.603 -9.995 0.434 26.364 9 AA_G26G27:C101C102_AA A 26 ? A 102 ? A 27 ? A 101 ? 1 A G 27 1_555 A C 101 1_555 A G 28 1_555 A A 100 1_555 -0.244 -0.879 3.376 5.900 2.754 64.610 -0.937 0.480 3.310 2.570 -5.505 64.902 10 AA_G27G28:A100C101_AA A 27 ? A 101 ? A 28 ? A 100 ? 1 A C 31 1_555 A C 97 1_555 A C 32 1_555 A G 96 1_555 -0.163 -0.527 3.298 5.068 5.782 39.191 -1.434 0.820 3.148 8.520 -7.468 39.909 11 AA_C31C32:G96C97_AA A 31 ? A 97 ? A 32 ? A 96 ? 1 A G 39 1_555 A C 94 1_555 A G 40 1_555 A C 91 1_555 3.413 -0.946 2.853 -1.898 -2.582 51.097 -0.942 -4.063 2.775 -2.990 2.197 51.191 12 AA_G39G40:C91C94_AA A 39 ? A 94 ? A 40 ? A 91 ? 1 A G 40 1_555 A C 91 1_555 A G 41 1_555 A C 90 1_555 0.672 -2.384 3.469 2.166 2.691 24.788 -6.327 -0.889 3.241 6.229 -5.014 25.023 13 AA_G40G41:C90C91_AA A 40 ? A 91 ? A 41 ? A 90 ? 1 A G 41 1_555 A C 90 1_555 A G 42 1_555 A C 89 1_555 -0.826 -2.503 3.448 -2.060 2.816 25.911 -6.318 1.253 3.217 6.243 4.567 26.141 14 AA_G41G42:C89C90_AA A 41 ? A 90 ? A 42 ? A 89 ? 1 A G 42 1_555 A C 89 1_555 A C 43 1_555 A G 88 1_555 -0.392 -1.574 3.233 -0.229 2.358 33.580 -3.091 0.641 3.121 4.076 0.395 33.662 15 AA_G42C43:G88C89_AA A 42 ? A 89 ? A 43 ? A 88 ? 1 A C 43 1_555 A G 88 1_555 A G 44 1_555 A A 87 1_555 -0.603 -0.796 3.003 -0.941 8.738 43.091 -1.806 0.726 2.810 11.750 1.265 43.936 16 AA_C43G44:A87G88_AA A 43 ? A 88 ? A 44 ? A 87 ? 1 A A 58 1_555 A G 55 1_555 A G 59 1_555 A C 54 1_555 1.229 -1.148 3.367 6.211 1.268 49.167 -1.468 -0.986 3.460 1.517 -7.429 49.549 17 AA_A58G59:C54G55_AA A 58 ? A 55 ? A 59 ? A 54 ? 1 A G 59 1_555 A C 54 1_555 A G 60 1_555 A C 53 1_555 0.638 -1.320 3.759 3.221 9.094 29.448 -4.409 -0.509 3.266 17.313 -6.132 30.955 18 AA_G59G60:C53C54_AA A 59 ? A 54 ? A 60 ? A 53 ? 1 A G 60 1_555 A C 53 1_555 A A 61 1_555 A U 52 1_555 0.225 -1.127 2.928 -1.981 2.603 33.430 -2.326 -0.675 2.817 4.512 3.433 33.586 19 AA_G60A61:U52C53_AA A 60 ? A 53 ? A 61 ? A 52 ? 1 A A 61 1_555 A U 52 1_555 A A 62 1_555 A U 51 1_555 0.501 -2.541 3.249 6.235 6.068 27.539 -6.354 0.286 2.685 12.362 -12.701 28.855 20 AA_A61A62:U51U52_AA A 61 ? A 52 ? A 62 ? A 51 ? 1 A A 62 1_555 A U 51 1_555 A G 63 1_555 A C 50 1_555 -0.023 -1.910 3.366 6.052 3.246 30.281 -4.194 1.206 3.087 6.116 -11.401 31.032 21 AA_A62G63:C50U51_AA A 62 ? A 51 ? A 63 ? A 50 ? 1 A G 63 1_555 A C 50 1_555 A A 64 1_555 A U 49 1_555 0.144 -0.994 3.040 0.182 5.316 35.834 -2.277 -0.209 2.869 8.582 -0.294 36.214 22 AA_G63A64:U49C50_AA A 63 ? A 50 ? A 64 ? A 49 ? 1 A A 64 1_555 A U 49 1_555 A G 65 1_555 A C 48 1_555 0.705 -2.361 3.179 0.928 8.736 17.045 -10.671 -1.737 1.796 27.246 -2.894 19.160 23 AA_A64G65:C48U49_AA A 64 ? A 49 ? A 65 ? A 48 ? 1 A G 65 1_555 A C 48 1_555 A U 66 1_555 A U 47 1_555 0.366 -0.947 3.333 0.538 5.356 47.760 -1.587 -0.407 3.218 6.591 -0.662 48.044 24 AA_G65U66:U47C48_AA A 65 ? A 48 ? A 66 ? A 47 ? 1 A U 66 1_555 A U 47 1_555 A A 67 1_555 A G 86 1_555 1.017 -0.253 3.536 -5.179 5.656 25.344 -2.119 -3.656 3.140 12.529 11.474 26.461 25 AA_U66A67:G86U47_AA A 66 ? A 47 ? A 67 ? A 86 ? 1 A A 67 1_555 A G 86 1_555 A G 68 1_555 A C 85 1_555 0.560 -1.097 3.488 -0.699 7.808 57.700 -1.560 -0.614 3.321 8.050 0.720 58.185 26 AA_A67G68:C85G86_AA A 67 ? A 86 ? A 68 ? A 85 ? 1 A G 68 1_555 A C 85 1_555 A G 69 1_555 A C 84 1_555 0.611 -2.336 3.291 -1.306 7.379 29.621 -5.780 -1.398 2.617 14.150 2.504 30.534 27 AA_G68G69:C84C85_AA A 68 ? A 85 ? A 69 ? A 84 ? 1 A G 69 1_555 A C 84 1_555 A G 70 1_555 A C 83 1_555 -1.258 -2.258 2.945 -3.096 4.335 24.834 -6.219 2.090 2.654 9.933 7.094 25.390 28 AA_G69G70:C83C84_AA A 69 ? A 84 ? A 70 ? A 83 ? 1 A G 70 1_555 A C 83 1_555 A U 71 1_555 A A 82 1_555 -0.227 -1.285 2.907 0.611 6.883 29.916 -3.572 0.531 2.550 13.114 -1.163 30.686 29 AA_G70U71:A82C83_AA A 70 ? A 83 ? A 71 ? A 82 ? 1 A U 71 1_555 A A 82 1_555 A U 72 1_555 A G 81 1_555 0.179 -0.701 3.387 -1.365 3.724 42.560 -1.344 -0.386 3.310 5.118 1.876 42.736 30 AA_U71U72:G81A82_AA A 71 ? A 82 ? A 72 ? A 81 ? 1 A U 72 1_555 A G 81 1_555 A G 115 1_555 A C 80 1_555 -1.886 -1.414 3.275 2.067 13.176 28.345 -4.848 3.849 2.269 25.217 -3.956 31.267 31 AA_U72G115:C80G81_AA A 72 ? A 81 ? A 115 ? A 80 ? 1 A G 115 1_555 A C 80 1_555 A A 116 1_555 A U 79 1_555 0.370 -1.534 3.476 -2.418 7.498 35.038 -3.577 -0.950 3.062 12.263 3.954 35.886 32 AA_G115A116:U79C80_AA A 115 ? A 80 ? A 116 ? A 79 ? 1 A A 116 1_555 A U 79 1_555 A A 117 1_555 A U 78 1_555 -0.767 -1.826 3.158 -6.171 21.650 26.358 -5.772 0.524 1.436 39.544 11.272 34.533 33 AA_A116A117:U78U79_AA A 116 ? A 79 ? A 117 ? A 78 ? 1 A A 117 1_555 A U 78 1_555 A G 118 1_555 A C 77 1_555 -0.207 -2.013 3.057 -3.211 1.336 27.064 -4.575 -0.302 2.961 2.840 6.825 27.283 34 AA_A117G118:C77U78_AA A 117 ? A 78 ? A 118 ? A 77 ? 1 A G 118 1_555 A C 77 1_555 A G 119 1_555 A C 76 1_555 -0.263 -1.740 3.229 0.512 9.815 33.082 -4.328 0.517 2.617 16.782 -0.876 34.472 35 AA_G118G119:C76C77_AA A 118 ? A 77 ? A 119 ? A 76 ? 1 A G 119 1_555 A C 76 1_555 A A 120 1_555 A U 75 1_555 0.332 -1.634 3.097 5.689 7.994 29.791 -4.373 0.345 2.600 15.044 -10.705 31.330 36 AA_G119A120:U75C76_AA A 119 ? A 76 ? A 120 ? A 75 ? 1 A A 120 1_555 A U 75 1_555 A G 121 1_555 A C 74 1_555 0.856 -1.946 3.888 5.163 16.074 29.131 -6.182 -0.579 2.603 29.082 -9.341 33.578 37 AA_A120G121:C74U75_AA A 120 ? A 75 ? A 121 ? A 74 ? # _atom_sites.entry_id 4QLM _atom_sites.fract_transf_matrix[1][1] 0.012696 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011367 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006885 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_