data_4QPO # _entry.id 4QPO # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4QPO pdb_00004qpo 10.2210/pdb4qpo/pdb RCSB RCSB086355 ? ? WWPDB D_1000086355 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-03 2 'Structure model' 1 1 2014-10-22 3 'Structure model' 1 2 2014-12-17 4 'Structure model' 1 3 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.entry_id 4QPO _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-06-24 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Peng, Y.' 1 'Lu, J.' 2 'Wong, J.' 3 'Edwards, R.A.' 4 'Frost, L.S.' 5 'Glover, J.N.M.' 6 # _citation.id primary _citation.title 'Mechanistic Basis of Plasmid-Specific DNA Binding of the F Plasmid Regulatory Protein, TraM.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 426 _citation.page_first 3783 _citation.page_last 3795 _citation.year 2014 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25284757 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2014.09.018 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Peng, Y.' 1 ? primary 'Lu, J.' 2 ? primary 'Wong, J.J.' 3 ? primary 'Edwards, R.A.' 4 ? primary 'Frost, L.S.' 5 ? primary 'Mark Glover, J.N.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Relaxosome protein TraM' 6017.867 4 ? ? ? ? 2 non-polymer syn 'PHOSPHATE ION' 94.971 4 ? ? ? ? 3 water nat water 18.015 24 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code AKVNLYISNDAYEKINAIIEKRRQEGAREKDVSFSATASMLLELGLRVHEAQM _entity_poly.pdbx_seq_one_letter_code_can AKVNLYISNDAYEKINAIIEKRRQEGAREKDVSFSATASMLLELGLRVHEAQM _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'PHOSPHATE ION' PO4 3 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LYS n 1 3 VAL n 1 4 ASN n 1 5 LEU n 1 6 TYR n 1 7 ILE n 1 8 SER n 1 9 ASN n 1 10 ASP n 1 11 ALA n 1 12 TYR n 1 13 GLU n 1 14 LYS n 1 15 ILE n 1 16 ASN n 1 17 ALA n 1 18 ILE n 1 19 ILE n 1 20 GLU n 1 21 LYS n 1 22 ARG n 1 23 ARG n 1 24 GLN n 1 25 GLU n 1 26 GLY n 1 27 ALA n 1 28 ARG n 1 29 GLU n 1 30 LYS n 1 31 ASP n 1 32 VAL n 1 33 SER n 1 34 PHE n 1 35 SER n 1 36 ALA n 1 37 THR n 1 38 ALA n 1 39 SER n 1 40 MET n 1 41 LEU n 1 42 LEU n 1 43 GLU n 1 44 LEU n 1 45 GLY n 1 46 LEU n 1 47 ARG n 1 48 VAL n 1 49 HIS n 1 50 GLU n 1 51 ALA n 1 52 GLN n 1 53 MET n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'traM, ECOK12F071' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 2 2 ALA ALA A . n A 1 2 LYS 2 3 3 LYS LYS A . n A 1 3 VAL 3 4 4 VAL VAL A . n A 1 4 ASN 4 5 5 ASN ASN A . n A 1 5 LEU 5 6 6 LEU LEU A . n A 1 6 TYR 6 7 7 TYR TYR A . n A 1 7 ILE 7 8 8 ILE ILE A . n A 1 8 SER 8 9 9 SER SER A . n A 1 9 ASN 9 10 10 ASN ASN A . n A 1 10 ASP 10 11 11 ASP ASP A . n A 1 11 ALA 11 12 12 ALA ALA A . n A 1 12 TYR 12 13 13 TYR TYR A . n A 1 13 GLU 13 14 14 GLU GLU A . n A 1 14 LYS 14 15 15 LYS LYS A . n A 1 15 ILE 15 16 16 ILE ILE A . n A 1 16 ASN 16 17 17 ASN ASN A . n A 1 17 ALA 17 18 18 ALA ALA A . n A 1 18 ILE 18 19 19 ILE ILE A . n A 1 19 ILE 19 20 20 ILE ILE A . n A 1 20 GLU 20 21 21 GLU GLU A . n A 1 21 LYS 21 22 22 LYS LYS A . n A 1 22 ARG 22 23 23 ARG ARG A . n A 1 23 ARG 23 24 24 ARG ARG A . n A 1 24 GLN 24 25 25 GLN GLN A . n A 1 25 GLU 25 26 26 GLU GLU A . n A 1 26 GLY 26 27 27 GLY GLY A . n A 1 27 ALA 27 28 28 ALA ALA A . n A 1 28 ARG 28 29 29 ARG ARG A . n A 1 29 GLU 29 30 30 GLU GLU A . n A 1 30 LYS 30 31 31 LYS LYS A . n A 1 31 ASP 31 32 32 ASP ASP A . n A 1 32 VAL 32 33 33 VAL VAL A . n A 1 33 SER 33 34 34 SER SER A . n A 1 34 PHE 34 35 35 PHE PHE A . n A 1 35 SER 35 36 36 SER SER A . n A 1 36 ALA 36 37 37 ALA ALA A . n A 1 37 THR 37 38 38 THR THR A . n A 1 38 ALA 38 39 39 ALA ALA A . n A 1 39 SER 39 40 40 SER SER A . n A 1 40 MET 40 41 41 MET MET A . n A 1 41 LEU 41 42 42 LEU LEU A . n A 1 42 LEU 42 43 43 LEU LEU A . n A 1 43 GLU 43 44 44 GLU GLU A . n A 1 44 LEU 44 45 45 LEU LEU A . n A 1 45 GLY 45 46 46 GLY GLY A . n A 1 46 LEU 46 47 47 LEU LEU A . n A 1 47 ARG 47 48 48 ARG ARG A . n A 1 48 VAL 48 49 49 VAL VAL A . n A 1 49 HIS 49 50 50 HIS HIS A . n A 1 50 GLU 50 51 51 GLU GLU A . n A 1 51 ALA 51 52 52 ALA ALA A . n A 1 52 GLN 52 53 53 GLN GLN A . n A 1 53 MET 53 54 54 MET MET A . n B 1 1 ALA 1 2 2 ALA ALA B . n B 1 2 LYS 2 3 3 LYS LYS B . n B 1 3 VAL 3 4 4 VAL VAL B . n B 1 4 ASN 4 5 5 ASN ASN B . n B 1 5 LEU 5 6 6 LEU LEU B . n B 1 6 TYR 6 7 7 TYR TYR B . n B 1 7 ILE 7 8 8 ILE ILE B . n B 1 8 SER 8 9 9 SER SER B . n B 1 9 ASN 9 10 10 ASN ASN B . n B 1 10 ASP 10 11 11 ASP ASP B . n B 1 11 ALA 11 12 12 ALA ALA B . n B 1 12 TYR 12 13 13 TYR TYR B . n B 1 13 GLU 13 14 14 GLU GLU B . n B 1 14 LYS 14 15 15 LYS LYS B . n B 1 15 ILE 15 16 16 ILE ILE B . n B 1 16 ASN 16 17 17 ASN ASN B . n B 1 17 ALA 17 18 18 ALA ALA B . n B 1 18 ILE 18 19 19 ILE ILE B . n B 1 19 ILE 19 20 20 ILE ILE B . n B 1 20 GLU 20 21 21 GLU GLU B . n B 1 21 LYS 21 22 22 LYS LYS B . n B 1 22 ARG 22 23 23 ARG ARG B . n B 1 23 ARG 23 24 24 ARG ARG B . n B 1 24 GLN 24 25 25 GLN GLN B . n B 1 25 GLU 25 26 26 GLU GLU B . n B 1 26 GLY 26 27 27 GLY GLY B . n B 1 27 ALA 27 28 28 ALA ALA B . n B 1 28 ARG 28 29 29 ARG ARG B . n B 1 29 GLU 29 30 30 GLU GLU B . n B 1 30 LYS 30 31 31 LYS LYS B . n B 1 31 ASP 31 32 32 ASP ASP B . n B 1 32 VAL 32 33 33 VAL VAL B . n B 1 33 SER 33 34 34 SER SER B . n B 1 34 PHE 34 35 35 PHE PHE B . n B 1 35 SER 35 36 36 SER SER B . n B 1 36 ALA 36 37 37 ALA ALA B . n B 1 37 THR 37 38 38 THR THR B . n B 1 38 ALA 38 39 39 ALA ALA B . n B 1 39 SER 39 40 40 SER SER B . n B 1 40 MET 40 41 41 MET MET B . n B 1 41 LEU 41 42 42 LEU LEU B . n B 1 42 LEU 42 43 43 LEU LEU B . n B 1 43 GLU 43 44 44 GLU GLU B . n B 1 44 LEU 44 45 45 LEU LEU B . n B 1 45 GLY 45 46 46 GLY GLY B . n B 1 46 LEU 46 47 47 LEU LEU B . n B 1 47 ARG 47 48 48 ARG ARG B . n B 1 48 VAL 48 49 49 VAL VAL B . n B 1 49 HIS 49 50 50 HIS HIS B . n B 1 50 GLU 50 51 51 GLU GLU B . n B 1 51 ALA 51 52 52 ALA ALA B . n B 1 52 GLN 52 53 ? ? ? B . n B 1 53 MET 53 54 ? ? ? B . n C 1 1 ALA 1 2 2 ALA ALA C . n C 1 2 LYS 2 3 3 LYS LYS C . n C 1 3 VAL 3 4 4 VAL VAL C . n C 1 4 ASN 4 5 5 ASN ASN C . n C 1 5 LEU 5 6 6 LEU LEU C . n C 1 6 TYR 6 7 7 TYR TYR C . n C 1 7 ILE 7 8 8 ILE ILE C . n C 1 8 SER 8 9 9 SER SER C . n C 1 9 ASN 9 10 10 ASN ASN C . n C 1 10 ASP 10 11 11 ASP ASP C . n C 1 11 ALA 11 12 12 ALA ALA C . n C 1 12 TYR 12 13 13 TYR TYR C . n C 1 13 GLU 13 14 14 GLU GLU C . n C 1 14 LYS 14 15 15 LYS LYS C . n C 1 15 ILE 15 16 16 ILE ILE C . n C 1 16 ASN 16 17 17 ASN ASN C . n C 1 17 ALA 17 18 18 ALA ALA C . n C 1 18 ILE 18 19 19 ILE ILE C . n C 1 19 ILE 19 20 20 ILE ILE C . n C 1 20 GLU 20 21 21 GLU GLU C . n C 1 21 LYS 21 22 22 LYS LYS C . n C 1 22 ARG 22 23 23 ARG ARG C . n C 1 23 ARG 23 24 24 ARG ARG C . n C 1 24 GLN 24 25 25 GLN GLN C . n C 1 25 GLU 25 26 26 GLU GLU C . n C 1 26 GLY 26 27 27 GLY GLY C . n C 1 27 ALA 27 28 28 ALA ALA C . n C 1 28 ARG 28 29 29 ARG ARG C . n C 1 29 GLU 29 30 30 GLU GLU C . n C 1 30 LYS 30 31 31 LYS LYS C . n C 1 31 ASP 31 32 32 ASP ASP C . n C 1 32 VAL 32 33 33 VAL VAL C . n C 1 33 SER 33 34 34 SER SER C . n C 1 34 PHE 34 35 35 PHE PHE C . n C 1 35 SER 35 36 36 SER SER C . n C 1 36 ALA 36 37 37 ALA ALA C . n C 1 37 THR 37 38 38 THR THR C . n C 1 38 ALA 38 39 39 ALA ALA C . n C 1 39 SER 39 40 40 SER SER C . n C 1 40 MET 40 41 41 MET MET C . n C 1 41 LEU 41 42 42 LEU LEU C . n C 1 42 LEU 42 43 43 LEU LEU C . n C 1 43 GLU 43 44 44 GLU GLU C . n C 1 44 LEU 44 45 45 LEU LEU C . n C 1 45 GLY 45 46 46 GLY GLY C . n C 1 46 LEU 46 47 47 LEU LEU C . n C 1 47 ARG 47 48 48 ARG ARG C . n C 1 48 VAL 48 49 49 VAL VAL C . n C 1 49 HIS 49 50 50 HIS HIS C . n C 1 50 GLU 50 51 51 GLU GLU C . n C 1 51 ALA 51 52 52 ALA ALA C . n C 1 52 GLN 52 53 53 GLN GLN C . n C 1 53 MET 53 54 54 MET MET C . n D 1 1 ALA 1 2 2 ALA ALA D . n D 1 2 LYS 2 3 3 LYS LYS D . n D 1 3 VAL 3 4 4 VAL VAL D . n D 1 4 ASN 4 5 5 ASN ASN D . n D 1 5 LEU 5 6 6 LEU LEU D . n D 1 6 TYR 6 7 7 TYR TYR D . n D 1 7 ILE 7 8 8 ILE ILE D . n D 1 8 SER 8 9 9 SER SER D . n D 1 9 ASN 9 10 10 ASN ASN D . n D 1 10 ASP 10 11 11 ASP ASP D . n D 1 11 ALA 11 12 12 ALA ALA D . n D 1 12 TYR 12 13 13 TYR TYR D . n D 1 13 GLU 13 14 14 GLU GLU D . n D 1 14 LYS 14 15 15 LYS LYS D . n D 1 15 ILE 15 16 16 ILE ILE D . n D 1 16 ASN 16 17 17 ASN ASN D . n D 1 17 ALA 17 18 18 ALA ALA D . n D 1 18 ILE 18 19 19 ILE ILE D . n D 1 19 ILE 19 20 20 ILE ILE D . n D 1 20 GLU 20 21 21 GLU GLU D . n D 1 21 LYS 21 22 22 LYS LYS D . n D 1 22 ARG 22 23 23 ARG ARG D . n D 1 23 ARG 23 24 24 ARG ARG D . n D 1 24 GLN 24 25 25 GLN GLN D . n D 1 25 GLU 25 26 26 GLU GLU D . n D 1 26 GLY 26 27 27 GLY GLY D . n D 1 27 ALA 27 28 28 ALA ALA D . n D 1 28 ARG 28 29 29 ARG ARG D . n D 1 29 GLU 29 30 30 GLU GLU D . n D 1 30 LYS 30 31 31 LYS LYS D . n D 1 31 ASP 31 32 32 ASP ASP D . n D 1 32 VAL 32 33 33 VAL VAL D . n D 1 33 SER 33 34 34 SER SER D . n D 1 34 PHE 34 35 35 PHE PHE D . n D 1 35 SER 35 36 36 SER SER D . n D 1 36 ALA 36 37 37 ALA ALA D . n D 1 37 THR 37 38 38 THR THR D . n D 1 38 ALA 38 39 39 ALA ALA D . n D 1 39 SER 39 40 40 SER SER D . n D 1 40 MET 40 41 41 MET MET D . n D 1 41 LEU 41 42 42 LEU LEU D . n D 1 42 LEU 42 43 43 LEU LEU D . n D 1 43 GLU 43 44 44 GLU GLU D . n D 1 44 LEU 44 45 45 LEU LEU D . n D 1 45 GLY 45 46 46 GLY GLY D . n D 1 46 LEU 46 47 47 LEU LEU D . n D 1 47 ARG 47 48 48 ARG ARG D . n D 1 48 VAL 48 49 49 VAL VAL D . n D 1 49 HIS 49 50 50 HIS HIS D . n D 1 50 GLU 50 51 51 GLU GLU D . n D 1 51 ALA 51 52 52 ALA ALA D . n D 1 52 GLN 52 53 53 GLN GLN D . n D 1 53 MET 53 54 ? ? ? D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 2 PO4 1 101 1 PO4 PO4 B . F 2 PO4 1 101 2 PO4 PO4 C . G 2 PO4 1 102 3 PO4 PO4 C . H 2 PO4 1 101 4 PO4 PO4 D . I 3 HOH 1 101 7 HOH HOH A . I 3 HOH 2 102 11 HOH HOH A . I 3 HOH 3 103 15 HOH HOH A . I 3 HOH 4 104 19 HOH HOH A . I 3 HOH 5 105 21 HOH HOH A . J 3 HOH 1 201 1 HOH HOH B . J 3 HOH 2 202 4 HOH HOH B . J 3 HOH 3 203 8 HOH HOH B . J 3 HOH 4 204 9 HOH HOH B . J 3 HOH 5 205 12 HOH HOH B . J 3 HOH 6 206 13 HOH HOH B . J 3 HOH 7 207 14 HOH HOH B . J 3 HOH 8 208 17 HOH HOH B . J 3 HOH 9 209 24 HOH HOH B . K 3 HOH 1 201 2 HOH HOH C . K 3 HOH 2 202 3 HOH HOH C . K 3 HOH 3 203 5 HOH HOH C . K 3 HOH 4 204 6 HOH HOH C . K 3 HOH 5 205 18 HOH HOH C . K 3 HOH 6 206 20 HOH HOH C . L 3 HOH 1 201 10 HOH HOH D . L 3 HOH 2 202 16 HOH HOH D . L 3 HOH 3 203 22 HOH HOH D . L 3 HOH 4 204 23 HOH HOH D . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 24 ? CG ? A ARG 23 CG 2 1 Y 1 A ARG 24 ? CD ? A ARG 23 CD 3 1 Y 1 A ARG 24 ? NE ? A ARG 23 NE 4 1 Y 1 A ARG 24 ? CZ ? A ARG 23 CZ 5 1 Y 1 A ARG 24 ? NH1 ? A ARG 23 NH1 6 1 Y 1 A ARG 24 ? NH2 ? A ARG 23 NH2 7 1 Y 1 A GLU 26 ? CG ? A GLU 25 CG 8 1 Y 1 A GLU 26 ? CD ? A GLU 25 CD 9 1 Y 1 A GLU 26 ? OE1 ? A GLU 25 OE1 10 1 Y 1 A GLU 26 ? OE2 ? A GLU 25 OE2 11 1 Y 1 A ARG 29 ? CG ? A ARG 28 CG 12 1 Y 1 A ARG 29 ? CD ? A ARG 28 CD 13 1 Y 1 A ARG 29 ? NE ? A ARG 28 NE 14 1 Y 1 A ARG 29 ? CZ ? A ARG 28 CZ 15 1 Y 1 A ARG 29 ? NH1 ? A ARG 28 NH1 16 1 Y 1 A ARG 29 ? NH2 ? A ARG 28 NH2 17 1 Y 1 A GLU 30 ? CG ? A GLU 29 CG 18 1 Y 1 A GLU 30 ? CD ? A GLU 29 CD 19 1 Y 1 A GLU 30 ? OE1 ? A GLU 29 OE1 20 1 Y 1 A GLU 30 ? OE2 ? A GLU 29 OE2 21 1 Y 1 A LYS 31 ? CG ? A LYS 30 CG 22 1 Y 1 A LYS 31 ? CD ? A LYS 30 CD 23 1 Y 1 A LYS 31 ? CE ? A LYS 30 CE 24 1 Y 1 A LYS 31 ? NZ ? A LYS 30 NZ 25 1 Y 1 A ASP 32 ? CG ? A ASP 31 CG 26 1 Y 1 A ASP 32 ? OD1 ? A ASP 31 OD1 27 1 Y 1 A ASP 32 ? OD2 ? A ASP 31 OD2 28 1 Y 1 B GLU 21 ? CG ? B GLU 20 CG 29 1 Y 1 B GLU 21 ? CD ? B GLU 20 CD 30 1 Y 1 B GLU 21 ? OE1 ? B GLU 20 OE1 31 1 Y 1 B GLU 21 ? OE2 ? B GLU 20 OE2 32 1 Y 1 B ARG 29 ? CG ? B ARG 28 CG 33 1 Y 1 B ARG 29 ? CD ? B ARG 28 CD 34 1 Y 1 B ARG 29 ? NE ? B ARG 28 NE 35 1 Y 1 B ARG 29 ? CZ ? B ARG 28 CZ 36 1 Y 1 B ARG 29 ? NH1 ? B ARG 28 NH1 37 1 Y 1 B ARG 29 ? NH2 ? B ARG 28 NH2 38 1 Y 1 C ARG 29 ? CG ? C ARG 28 CG 39 1 Y 1 C ARG 29 ? CD ? C ARG 28 CD 40 1 Y 1 C ARG 29 ? NE ? C ARG 28 NE 41 1 Y 1 C ARG 29 ? CZ ? C ARG 28 CZ 42 1 Y 1 C ARG 29 ? NH1 ? C ARG 28 NH1 43 1 Y 1 C ARG 29 ? NH2 ? C ARG 28 NH2 44 1 Y 1 C ARG 48 ? CG ? C ARG 47 CG 45 1 Y 1 C ARG 48 ? CD ? C ARG 47 CD 46 1 Y 1 C ARG 48 ? NE ? C ARG 47 NE 47 1 Y 1 C ARG 48 ? CZ ? C ARG 47 CZ 48 1 Y 1 C ARG 48 ? NH1 ? C ARG 47 NH1 49 1 Y 1 C ARG 48 ? NH2 ? C ARG 47 NH2 50 1 Y 1 D ARG 29 ? CG ? D ARG 28 CG 51 1 Y 1 D ARG 29 ? CD ? D ARG 28 CD 52 1 Y 1 D ARG 29 ? NE ? D ARG 28 NE 53 1 Y 1 D ARG 29 ? CZ ? D ARG 28 CZ 54 1 Y 1 D ARG 29 ? NH1 ? D ARG 28 NH1 55 1 Y 1 D ARG 29 ? NH2 ? D ARG 28 NH2 56 1 Y 1 D LYS 31 ? CG ? D LYS 30 CG 57 1 Y 1 D LYS 31 ? CD ? D LYS 30 CD 58 1 Y 1 D LYS 31 ? CE ? D LYS 30 CE 59 1 Y 1 D LYS 31 ? NZ ? D LYS 30 NZ # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.8.3_1479 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? # _cell.length_a 115.682 _cell.length_b 115.682 _cell.length_c 54.713 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4QPO _cell.pdbx_unique_axis ? _cell.Z_PDB 36 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'H 3' _symmetry.entry_id 4QPO _symmetry.Int_Tables_number 146 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # _exptl.crystals_number 1 _exptl.entry_id 4QPO _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.93 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 57.98 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 5.5 _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '1 M ammonium phosphate dibasic, 100 mM sodium citrate, pH 5.5 and 200 mM NaCl., VAPOR DIFFUSION, SITTING DROP, temperature 298.0K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2014-01-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator unknown _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.07808 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 12.3.1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.07808 _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 12.3.1 # _reflns.entry_id 4QPO _reflns.d_resolution_high 2.000 _reflns.d_resolution_low 50.000 _reflns.number_obs 18422 _reflns.pdbx_Rmerge_I_obs 0.073 _reflns.pdbx_netI_over_sigmaI 14.000 _reflns.pdbx_chi_squared 1.085 _reflns.pdbx_redundancy 5.500 _reflns.percent_possible_obs 99.800 _reflns.B_iso_Wilson_estimate 35.540 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 18422 _reflns.pdbx_Rsym_value ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.000 2.070 ? ? ? 0.740 ? ? 1.206 5.300 ? 1843 99.800 1 1 2.070 2.150 ? ? ? 0.526 ? ? 1.230 5.400 ? 1824 100.000 2 1 2.150 2.250 ? ? ? 0.364 ? ? 1.210 5.500 ? 1877 100.000 3 1 2.250 2.370 ? ? ? 0.266 ? ? 1.161 5.500 ? 1850 100.000 4 1 2.370 2.520 ? ? ? 0.197 ? ? 1.041 5.600 ? 1835 100.000 5 1 2.520 2.710 ? ? ? 0.141 ? ? 1.005 5.600 ? 1830 100.000 6 1 2.710 2.990 ? ? ? 0.098 ? ? 1.006 5.600 ? 1864 100.000 7 1 2.990 3.420 ? ? ? 0.075 ? ? 1.005 5.500 ? 1849 100.000 8 1 3.420 4.310 ? ? ? 0.054 ? ? 0.987 5.300 ? 1842 100.000 9 1 4.310 50.000 ? ? ? 0.038 ? ? 1.006 5.700 ? 1808 97.900 10 1 # _refine.entry_id 4QPO _refine.ls_d_res_high 1.9990 _refine.ls_d_res_low 36.9460 _refine.pdbx_ls_sigma_F 1.980 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.7600 _refine.ls_number_reflns_obs 18416 _refine.ls_number_reflns_all 18416 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1942 _refine.ls_R_factor_R_work 0.1922 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2304 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1400 _refine.ls_number_reflns_R_free 946 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 51.1400 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.1900 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8384 _refine.B_iso_max 161.330 _refine.B_iso_min 23.280 _refine.pdbx_overall_phase_error 23.9000 _refine.occupancy_max ? _refine.occupancy_min ? _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1598 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 24 _refine_hist.number_atoms_total 1642 _refine_hist.d_res_high 1.9990 _refine_hist.d_res_low 36.9460 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 1626 0.011 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 2187 1.082 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 253 0.050 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 280 0.004 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 597 13.243 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.9995 2.1049 7 100.0000 2491 . 0.2549 0.2740 . 162 . 2653 . . 'X-RAY DIFFRACTION' 2.1049 2.2367 7 100.0000 2498 . 0.2176 0.2115 . 122 . 2620 . . 'X-RAY DIFFRACTION' 2.2367 2.4094 7 100.0000 2523 . 0.2066 0.2364 . 126 . 2649 . . 'X-RAY DIFFRACTION' 2.4094 2.6518 7 100.0000 2498 . 0.2171 0.2902 . 127 . 2625 . . 'X-RAY DIFFRACTION' 2.6518 3.0354 7 100.0000 2497 . 0.2039 0.2241 . 140 . 2637 . . 'X-RAY DIFFRACTION' 3.0354 3.8236 7 100.0000 2502 . 0.1914 0.2470 . 135 . 2637 . . 'X-RAY DIFFRACTION' 3.8236 36.9524 7 99.0000 2461 . 0.1680 0.2041 . 134 . 2595 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4QPO _struct.title 'Mechanistic basis of plasmid-specific DNA binding of the F plasmid regulatory protein, TraM' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QPO _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'RHH Domain, DNA Binding, TRANSCRIPTION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? F N N 2 ? G N N 2 ? H N N 2 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TRAM1_ECOLI _struct_ref.pdbx_db_accession P10026 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code AKVNLYISNDAYEKINAIIEKRRQEGAREKDVSFSATASMLLELGLRVHEAQM _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4QPO A 1 ? 53 ? P10026 2 ? 54 ? 2 54 2 1 4QPO B 1 ? 53 ? P10026 2 ? 54 ? 2 54 3 1 4QPO C 1 ? 53 ? P10026 2 ? 54 ? 2 54 4 1 4QPO D 1 ? 53 ? P10026 2 ? 54 ? 2 54 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 7620 ? 1 MORE -74 ? 1 'SSA (A^2)' 11920 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 8 ? GLN A 24 ? SER A 9 GLN A 25 1 ? 17 HELX_P HELX_P2 2 SER A 33 ? MET A 53 ? SER A 34 MET A 54 1 ? 21 HELX_P HELX_P3 3 SER B 8 ? GLU B 25 ? SER B 9 GLU B 26 1 ? 18 HELX_P HELX_P4 4 ARG B 28 ? VAL B 32 ? ARG B 29 VAL B 33 5 ? 5 HELX_P HELX_P5 5 SER B 33 ? ALA B 51 ? SER B 34 ALA B 52 1 ? 19 HELX_P HELX_P6 6 SER C 8 ? GLU C 25 ? SER C 9 GLU C 26 1 ? 18 HELX_P HELX_P7 7 ARG C 28 ? VAL C 32 ? ARG C 29 VAL C 33 5 ? 5 HELX_P HELX_P8 8 SER C 33 ? GLU C 50 ? SER C 34 GLU C 51 1 ? 18 HELX_P HELX_P9 9 ALA C 51 ? MET C 53 ? ALA C 52 MET C 54 5 ? 3 HELX_P HELX_P10 10 SER D 8 ? GLU D 25 ? SER D 9 GLU D 26 1 ? 18 HELX_P HELX_P11 11 ARG D 28 ? VAL D 32 ? ARG D 29 VAL D 33 5 ? 5 HELX_P HELX_P12 12 SER D 33 ? GLN D 52 ? SER D 34 GLN D 53 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 2 ? TYR A 6 ? LYS A 3 TYR A 7 A 2 LYS C 2 ? TYR C 6 ? LYS C 3 TYR C 7 B 1 LYS B 2 ? TYR B 6 ? LYS B 3 TYR B 7 B 2 LYS D 2 ? TYR D 6 ? LYS D 3 TYR D 7 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 5 ? N LEU A 6 O VAL C 3 ? O VAL C 4 B 1 2 N LEU B 5 ? N LEU B 6 O VAL D 3 ? O VAL D 4 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software B PO4 101 ? 4 'BINDING SITE FOR RESIDUE PO4 B 101' AC2 Software C PO4 101 ? 4 'BINDING SITE FOR RESIDUE PO4 C 101' AC3 Software C PO4 102 ? 3 'BINDING SITE FOR RESIDUE PO4 C 102' AC4 Software D PO4 101 ? 6 'BINDING SITE FOR RESIDUE PO4 D 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 SER B 33 ? SER B 34 . ? 1_555 ? 2 AC1 4 PHE B 34 ? PHE B 35 . ? 1_555 ? 3 AC1 4 SER B 35 ? SER B 36 . ? 1_555 ? 4 AC1 4 HOH J . ? HOH B 208 . ? 1_555 ? 5 AC2 4 GLU C 25 ? GLU C 26 . ? 9_554 ? 6 AC2 4 SER C 33 ? SER C 34 . ? 1_555 ? 7 AC2 4 PHE C 34 ? PHE C 35 . ? 1_555 ? 8 AC2 4 SER C 35 ? SER C 36 . ? 1_555 ? 9 AC3 3 HIS A 49 ? HIS A 50 . ? 1_555 ? 10 AC3 3 LYS C 21 ? LYS C 22 . ? 1_555 ? 11 AC3 3 ARG C 22 ? ARG C 23 . ? 1_555 ? 12 AC4 6 LYS A 2 ? LYS A 3 . ? 5_555 ? 13 AC4 6 HIS B 49 ? HIS B 50 . ? 1_555 ? 14 AC4 6 ASN C 4 ? ASN C 5 . ? 5_555 ? 15 AC4 6 LYS D 21 ? LYS D 22 . ? 1_555 ? 16 AC4 6 ARG D 22 ? ARG D 23 . ? 1_555 ? 17 AC4 6 GLU D 25 ? GLU D 26 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 31 ? ? 59.75 -54.28 2 1 GLU C 30 ? ? 47.97 -128.32 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 11.5134 24.8075 15.9993 0.3539 0.4616 0.4115 -0.0107 0.0240 0.0688 5.8290 2.3306 3.4633 2.6929 -2.5355 -1.6585 0.4108 0.1919 -0.5946 0.7793 0.8793 -0.0562 -0.2929 -0.2420 0.0517 'X-RAY DIFFRACTION' 2 ? refined 18.3553 11.6370 7.1208 0.9312 1.0941 0.7240 0.2011 0.1587 -0.1649 4.6329 7.8017 4.5027 0.3950 0.2820 2.1636 -0.3627 -0.1486 0.3683 0.5498 -1.4357 0.2276 -1.4924 0.5801 0.2104 'X-RAY DIFFRACTION' 3 ? refined 9.5241 4.2520 7.8990 0.9221 1.2026 1.5864 -0.0013 0.0765 -0.6250 0.8253 3.2865 0.9455 0.7169 0.1529 -1.4321 -1.4943 0.3217 1.3783 -0.6645 -2.7306 0.8974 -0.8554 0.8886 -1.6965 'X-RAY DIFFRACTION' 4 ? refined 16.6329 14.0775 23.2569 0.2728 0.3881 0.4592 0.1156 -0.0283 -0.1287 6.2423 7.3946 6.8611 -1.9743 -1.5822 -1.9161 0.0116 0.1991 -0.1039 0.0201 -1.0993 0.2257 0.2865 0.9099 -0.5201 'X-RAY DIFFRACTION' 5 ? refined 42.4077 3.3339 31.4725 0.2839 0.5280 0.2631 0.0322 -0.0205 -0.0147 1.9863 2.1140 6.9469 1.5943 -2.1226 -1.2397 -0.0066 0.1224 -0.0368 0.0099 0.1915 -0.1529 0.0199 0.1687 0.8419 'X-RAY DIFFRACTION' 6 ? refined 27.6005 -5.8451 30.9793 0.2195 0.2947 0.3108 0.0049 0.0215 -0.0068 6.6299 6.3971 9.5149 3.9807 3.5162 3.9166 -0.2266 -0.2264 0.3610 -0.6240 0.1680 0.3823 0.0594 0.5166 -0.2554 'X-RAY DIFFRACTION' 7 ? refined 29.6909 -12.1835 21.1898 0.5974 0.3065 0.3487 -0.0036 0.0198 0.0062 8.5747 3.5115 5.4835 3.8103 1.5637 -0.3732 0.1406 0.0731 -0.0885 0.0588 -0.4624 -0.0076 -0.6340 0.8455 0.0367 'X-RAY DIFFRACTION' 8 ? refined 32.5605 7.2329 23.8252 0.2198 0.3030 0.3001 0.0541 -0.0063 -0.0115 5.6638 7.5288 4.6070 -1.8524 -0.4901 0.5380 0.0333 -0.2612 0.1753 0.0691 0.6877 -0.0459 -0.6245 -0.1610 -0.2366 'X-RAY DIFFRACTION' 9 ? refined 8.0234 21.4337 16.1919 0.3177 0.8213 0.5666 -0.2356 -0.1311 0.2144 3.8980 3.8391 4.5945 -0.3825 -3.1894 -1.4462 0.6531 0.2519 -0.4945 2.0918 0.5257 0.7831 -0.7801 -0.2927 0.7121 'X-RAY DIFFRACTION' 10 ? refined 15.0944 26.9498 30.8603 0.3350 0.3958 0.3546 0.0754 0.0213 -0.0352 6.3359 6.0531 4.4878 1.2905 2.1497 0.9611 -0.0590 -0.0799 0.0760 -0.3405 0.8707 0.6246 0.3043 -0.4961 -0.3658 'X-RAY DIFFRACTION' 11 ? refined 20.7899 16.2702 18.9839 0.4013 0.4984 0.3186 0.0892 0.0244 -0.0641 5.2485 9.1004 5.0098 -2.4616 -1.0556 0.5667 0.1990 -0.4014 0.1959 0.8931 -0.4080 -0.4584 -1.1221 0.3400 -0.0436 'X-RAY DIFFRACTION' 12 ? refined 42.8230 1.0163 27.0980 0.3962 0.4438 0.3067 0.0945 -0.0058 -0.0153 0.3523 0.5396 5.4005 0.2270 -1.1101 0.0937 -0.1245 0.0310 0.1027 -0.2117 -0.0786 -0.2520 -0.1997 0.5583 0.3719 'X-RAY DIFFRACTION' 13 ? refined 42.5808 18.3596 24.7116 0.4517 0.4207 0.4057 0.0032 0.0734 -0.0061 2.8299 3.9045 8.3084 0.0055 0.3924 5.4086 0.1679 0.1574 -0.2248 0.3948 0.2386 -1.2210 -1.0952 -1.0077 0.0009 'X-RAY DIFFRACTION' 14 ? refined 35.3336 11.2054 31.6606 0.2533 0.2928 0.2423 0.0641 0.0199 -0.0607 2.4877 6.1539 1.9406 -0.1473 -0.0428 0.4638 0.0816 -0.1268 0.0304 -0.6424 -0.0174 -0.1958 -0.0077 -0.0674 -0.1088 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 0 A 0 ;chain 'A' and (resid 2 through 9 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 0 A 0 ;chain 'A' and (resid 10 through 25 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 0 A 0 ;chain 'A' and (resid 26 through 34 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 0 A 0 ;chain 'A' and (resid 35 through 54 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 0 B 0 ;chain 'B' and (resid 2 through 9 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 0 B 0 ;chain 'B' and (resid 10 through 25 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 0 B 0 ;chain 'B' and (resid 26 through 34 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 0 B 0 ;chain 'B' and (resid 35 through 52 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 9 9 C 0 C 0 ;chain 'C' and (resid 2 through 9 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 10 10 C 0 C 0 ;chain 'C' and (resid 10 through 34 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 11 11 C 0 C 0 ;chain 'C' and (resid 35 through 54 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 12 12 D 0 D 0 ;chain 'D' and (resid 2 through 9 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 13 13 D 0 D 0 ;chain 'D' and (resid 10 through 26 ) ; ? ? ? ? ? 'X-RAY DIFFRACTION' 14 14 D 0 D 0 ;chain 'D' and (resid 27 through 53 ) ; ? ? ? ? ? # _phasing.method MR # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 B GLN 53 ? B GLN 52 2 1 Y 1 B MET 54 ? B MET 53 3 1 Y 1 D MET 54 ? D MET 53 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PO4 P P N N 259 PO4 O1 O N N 260 PO4 O2 O N N 261 PO4 O3 O N N 262 PO4 O4 O N N 263 SER N N N N 264 SER CA C N S 265 SER C C N N 266 SER O O N N 267 SER CB C N N 268 SER OG O N N 269 SER OXT O N N 270 SER H H N N 271 SER H2 H N N 272 SER HA H N N 273 SER HB2 H N N 274 SER HB3 H N N 275 SER HG H N N 276 SER HXT H N N 277 THR N N N N 278 THR CA C N S 279 THR C C N N 280 THR O O N N 281 THR CB C N R 282 THR OG1 O N N 283 THR CG2 C N N 284 THR OXT O N N 285 THR H H N N 286 THR H2 H N N 287 THR HA H N N 288 THR HB H N N 289 THR HG1 H N N 290 THR HG21 H N N 291 THR HG22 H N N 292 THR HG23 H N N 293 THR HXT H N N 294 TYR N N N N 295 TYR CA C N S 296 TYR C C N N 297 TYR O O N N 298 TYR CB C N N 299 TYR CG C Y N 300 TYR CD1 C Y N 301 TYR CD2 C Y N 302 TYR CE1 C Y N 303 TYR CE2 C Y N 304 TYR CZ C Y N 305 TYR OH O N N 306 TYR OXT O N N 307 TYR H H N N 308 TYR H2 H N N 309 TYR HA H N N 310 TYR HB2 H N N 311 TYR HB3 H N N 312 TYR HD1 H N N 313 TYR HD2 H N N 314 TYR HE1 H N N 315 TYR HE2 H N N 316 TYR HH H N N 317 TYR HXT H N N 318 VAL N N N N 319 VAL CA C N S 320 VAL C C N N 321 VAL O O N N 322 VAL CB C N N 323 VAL CG1 C N N 324 VAL CG2 C N N 325 VAL OXT O N N 326 VAL H H N N 327 VAL H2 H N N 328 VAL HA H N N 329 VAL HB H N N 330 VAL HG11 H N N 331 VAL HG12 H N N 332 VAL HG13 H N N 333 VAL HG21 H N N 334 VAL HG22 H N N 335 VAL HG23 H N N 336 VAL HXT H N N 337 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PO4 P O1 doub N N 247 PO4 P O2 sing N N 248 PO4 P O3 sing N N 249 PO4 P O4 sing N N 250 SER N CA sing N N 251 SER N H sing N N 252 SER N H2 sing N N 253 SER CA C sing N N 254 SER CA CB sing N N 255 SER CA HA sing N N 256 SER C O doub N N 257 SER C OXT sing N N 258 SER CB OG sing N N 259 SER CB HB2 sing N N 260 SER CB HB3 sing N N 261 SER OG HG sing N N 262 SER OXT HXT sing N N 263 THR N CA sing N N 264 THR N H sing N N 265 THR N H2 sing N N 266 THR CA C sing N N 267 THR CA CB sing N N 268 THR CA HA sing N N 269 THR C O doub N N 270 THR C OXT sing N N 271 THR CB OG1 sing N N 272 THR CB CG2 sing N N 273 THR CB HB sing N N 274 THR OG1 HG1 sing N N 275 THR CG2 HG21 sing N N 276 THR CG2 HG22 sing N N 277 THR CG2 HG23 sing N N 278 THR OXT HXT sing N N 279 TYR N CA sing N N 280 TYR N H sing N N 281 TYR N H2 sing N N 282 TYR CA C sing N N 283 TYR CA CB sing N N 284 TYR CA HA sing N N 285 TYR C O doub N N 286 TYR C OXT sing N N 287 TYR CB CG sing N N 288 TYR CB HB2 sing N N 289 TYR CB HB3 sing N N 290 TYR CG CD1 doub Y N 291 TYR CG CD2 sing Y N 292 TYR CD1 CE1 sing Y N 293 TYR CD1 HD1 sing N N 294 TYR CD2 CE2 doub Y N 295 TYR CD2 HD2 sing N N 296 TYR CE1 CZ doub Y N 297 TYR CE1 HE1 sing N N 298 TYR CE2 CZ sing Y N 299 TYR CE2 HE2 sing N N 300 TYR CZ OH sing N N 301 TYR OH HH sing N N 302 TYR OXT HXT sing N N 303 VAL N CA sing N N 304 VAL N H sing N N 305 VAL N H2 sing N N 306 VAL CA C sing N N 307 VAL CA CB sing N N 308 VAL CA HA sing N N 309 VAL C O doub N N 310 VAL C OXT sing N N 311 VAL CB CG1 sing N N 312 VAL CB CG2 sing N N 313 VAL CB HB sing N N 314 VAL CG1 HG11 sing N N 315 VAL CG1 HG12 sing N N 316 VAL CG1 HG13 sing N N 317 VAL CG2 HG21 sing N N 318 VAL CG2 HG22 sing N N 319 VAL CG2 HG23 sing N N 320 VAL OXT HXT sing N N 321 # _atom_sites.entry_id 4QPO _atom_sites.fract_transf_matrix[1][1] 0.008644 _atom_sites.fract_transf_matrix[1][2] 0.004991 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009982 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018277 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S # loop_