data_4QQI # _entry.id 4QQI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4QQI RCSB RCSB086385 WWPDB D_1000086385 # _pdbx_database_status.entry_id 4QQI _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2014-06-27 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Xu, C.' 1 ? 'Tempel, W.' 2 ? 'Dong, A.' 3 ? 'Mackenzie, F.' 4 ? 'Bountra, C.' 5 ? 'Arrowsmith, C.H.' 6 ? 'Edwards, A.M.' 7 ? 'Min, J.' 8 ? 'Structural Genomics Consortium (SGC)' 9 ? # _citation.id primary _citation.title 'Crystal structure of ANKRA2-RFX7 complex' _citation.journal_abbrev 'To Be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Xu, C.' 1 ? primary 'Tempel, W.' 2 ? primary 'Mackenzie, F.' 3 ? primary 'Bountra, C.' 4 ? primary 'Arrowsmith, C.H.' 5 ? primary 'Edwards, A.M.' 6 ? primary 'Min, J.' 7 ? # _cell.entry_id 4QQI _cell.length_a 75.459 _cell.length_b 102.325 _cell.length_c 32.566 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4QQI _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ankyrin repeat family A protein 2' 20927.602 1 ? ? 'UNP residues 142-313' ? 2 polymer syn 'DNA-binding protein RFX7' 2000.364 1 ? ? 'UNP residues 85-101' ? 3 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 4 non-polymer syn 'UNKNOWN ATOM OR ION' ? 11 ? ? ? ? 5 non-polymer syn 'UNKNOWN LIGAND' ? 1 ? ? ? ? 6 water nat water 18.015 79 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'RFXANK-like protein 2' 2 'Regulatory factor X 7, Regulatory factor X domain-containing protein 2' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MHHHHHHSSGRENLYFQGSTTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ NGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN SMDLAVALGYRSVQQVIESHLLKLLQNIKE ; ;MHHHHHHSSGRENLYFQGSTTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQ NGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYN SMDLAVALGYRSVQQVIESHLLKLLQNIKE ; A ? 2 'polypeptide(L)' no no KAFVHMPTLPNLDFHKT KAFVHMPTLPNLDFHKT X ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 ARG n 1 12 GLU n 1 13 ASN n 1 14 LEU n 1 15 TYR n 1 16 PHE n 1 17 GLN n 1 18 GLY n 1 19 SER n 1 20 THR n 1 21 THR n 1 22 PRO n 1 23 LEU n 1 24 LEU n 1 25 ALA n 1 26 ASN n 1 27 SER n 1 28 LEU n 1 29 SER n 1 30 VAL n 1 31 HIS n 1 32 GLN n 1 33 LEU n 1 34 ALA n 1 35 ALA n 1 36 GLN n 1 37 GLY n 1 38 GLU n 1 39 MET n 1 40 LEU n 1 41 TYR n 1 42 LEU n 1 43 ALA n 1 44 THR n 1 45 ARG n 1 46 ILE n 1 47 GLU n 1 48 GLN n 1 49 GLU n 1 50 ASN n 1 51 VAL n 1 52 ILE n 1 53 ASN n 1 54 HIS n 1 55 THR n 1 56 ASP n 1 57 GLU n 1 58 GLU n 1 59 GLY n 1 60 PHE n 1 61 THR n 1 62 PRO n 1 63 LEU n 1 64 MET n 1 65 TRP n 1 66 ALA n 1 67 ALA n 1 68 ALA n 1 69 HIS n 1 70 GLY n 1 71 GLN n 1 72 ILE n 1 73 ALA n 1 74 VAL n 1 75 VAL n 1 76 GLU n 1 77 PHE n 1 78 LEU n 1 79 LEU n 1 80 GLN n 1 81 ASN n 1 82 GLY n 1 83 ALA n 1 84 ASP n 1 85 PRO n 1 86 GLN n 1 87 LEU n 1 88 LEU n 1 89 GLY n 1 90 LYS n 1 91 GLY n 1 92 ARG n 1 93 GLU n 1 94 SER n 1 95 ALA n 1 96 LEU n 1 97 SER n 1 98 LEU n 1 99 ALA n 1 100 CYS n 1 101 SER n 1 102 LYS n 1 103 GLY n 1 104 TYR n 1 105 THR n 1 106 ASP n 1 107 ILE n 1 108 VAL n 1 109 LYS n 1 110 MET n 1 111 LEU n 1 112 LEU n 1 113 ASP n 1 114 CYS n 1 115 GLY n 1 116 VAL n 1 117 ASP n 1 118 VAL n 1 119 ASN n 1 120 GLU n 1 121 TYR n 1 122 ASP n 1 123 TRP n 1 124 ASN n 1 125 GLY n 1 126 GLY n 1 127 THR n 1 128 PRO n 1 129 LEU n 1 130 LEU n 1 131 TYR n 1 132 ALA n 1 133 VAL n 1 134 HIS n 1 135 GLY n 1 136 ASN n 1 137 HIS n 1 138 VAL n 1 139 LYS n 1 140 CYS n 1 141 VAL n 1 142 LYS n 1 143 MET n 1 144 LEU n 1 145 LEU n 1 146 GLU n 1 147 SER n 1 148 GLY n 1 149 ALA n 1 150 ASP n 1 151 PRO n 1 152 THR n 1 153 ILE n 1 154 GLU n 1 155 THR n 1 156 ASP n 1 157 SER n 1 158 GLY n 1 159 TYR n 1 160 ASN n 1 161 SER n 1 162 MET n 1 163 ASP n 1 164 LEU n 1 165 ALA n 1 166 VAL n 1 167 ALA n 1 168 LEU n 1 169 GLY n 1 170 TYR n 1 171 ARG n 1 172 SER n 1 173 VAL n 1 174 GLN n 1 175 GLN n 1 176 VAL n 1 177 ILE n 1 178 GLU n 1 179 SER n 1 180 HIS n 1 181 LEU n 1 182 LEU n 1 183 LYS n 1 184 LEU n 1 185 LEU n 1 186 GLN n 1 187 ASN n 1 188 ILE n 1 189 LYS n 1 190 GLU n 2 1 LYS n 2 2 ALA n 2 3 PHE n 2 4 VAL n 2 5 HIS n 2 6 MET n 2 7 PRO n 2 8 THR n 2 9 LEU n 2 10 PRO n 2 11 ASN n 2 12 LEU n 2 13 ASP n 2 14 PHE n 2 15 HIS n 2 16 LYS n 2 17 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ANKRA2, ANKRA' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-V2R-pRARE2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28-MHL _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'Homo sapiens' _pdbx_entity_src_syn.organism_common_name human _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'synthetic peptide' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP ANRA2_HUMAN Q9H9E1 1 ;STTPLLANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSL ACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIE SHLLKLLQNIKE ; 142 ? 2 UNP RFX7_HUMAN Q2KHR2 2 KAFVHMPTLPNLDFHKT 85 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4QQI A 19 ? 190 ? Q9H9E1 142 ? 313 ? 142 313 2 2 4QQI X 1 ? 17 ? Q2KHR2 85 ? 101 ? 85 101 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4QQI MET A 1 ? UNP Q9H9E1 ? ? 'expression tag' 124 1 1 4QQI HIS A 2 ? UNP Q9H9E1 ? ? 'expression tag' 125 2 1 4QQI HIS A 3 ? UNP Q9H9E1 ? ? 'expression tag' 126 3 1 4QQI HIS A 4 ? UNP Q9H9E1 ? ? 'expression tag' 127 4 1 4QQI HIS A 5 ? UNP Q9H9E1 ? ? 'expression tag' 128 5 1 4QQI HIS A 6 ? UNP Q9H9E1 ? ? 'expression tag' 129 6 1 4QQI HIS A 7 ? UNP Q9H9E1 ? ? 'expression tag' 130 7 1 4QQI SER A 8 ? UNP Q9H9E1 ? ? 'expression tag' 131 8 1 4QQI SER A 9 ? UNP Q9H9E1 ? ? 'expression tag' 132 9 1 4QQI GLY A 10 ? UNP Q9H9E1 ? ? 'expression tag' 133 10 1 4QQI ARG A 11 ? UNP Q9H9E1 ? ? 'expression tag' 134 11 1 4QQI GLU A 12 ? UNP Q9H9E1 ? ? 'expression tag' 135 12 1 4QQI ASN A 13 ? UNP Q9H9E1 ? ? 'expression tag' 136 13 1 4QQI LEU A 14 ? UNP Q9H9E1 ? ? 'expression tag' 137 14 1 4QQI TYR A 15 ? UNP Q9H9E1 ? ? 'expression tag' 138 15 1 4QQI PHE A 16 ? UNP Q9H9E1 ? ? 'expression tag' 139 16 1 4QQI GLN A 17 ? UNP Q9H9E1 ? ? 'expression tag' 140 17 1 4QQI GLY A 18 ? UNP Q9H9E1 ? ? 'expression tag' 141 18 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 UNL non-polymer . 'UNKNOWN LIGAND' ? ? ? UNX non-polymer . 'UNKNOWN ATOM OR ION' ? ? ? VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4QQI _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_percent_sol 58.5 _exptl_crystal.density_Matthews 3.0 _exptl_crystal.density_meas ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '0.1 M sodium hepes, 2.0 M ammonium sulfate, 2% PEG 400, pH 7.5, vapor diffusion, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type R-Axis _diffrn_detector.pdbx_collection_date 2013-05-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E' _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 4QQI _reflns.d_resolution_high 2.020 _reflns.d_resolution_low 37.730 _reflns.number_obs 17145 _reflns.pdbx_Rmerge_I_obs 0.177 _reflns.pdbx_netI_over_sigmaI 10.500 _reflns.pdbx_redundancy 6.900 _reflns.percent_possible_obs 99.500 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.020 2.070 ? 7196 ? 0.010 2.100 ? ? 6.300 ? 1137 93.800 1 1 9.040 37.730 ? 1313 ? 0.010 34.700 ? ? 5.500 ? 240 98.300 2 1 # _refine.entry_id 4QQI _refine.ls_d_res_high 2.0300 _refine.ls_d_res_low 30.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.4100 _refine.ls_number_reflns_obs 16738 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'ARP/WARP was used for phase improvement and automated model building. COOT and MOLPROBITY were also used during refinement.' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2213 _refine.ls_R_factor_R_work 0.2188 _refine.ls_wR_factor_R_work 0.1818 _refine.ls_R_factor_R_free 0.2686 _refine.ls_wR_factor_R_free 0.2258 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 853 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 24.7826 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 3.0000 _refine.aniso_B[2][2] -1.7000 _refine.aniso_B[3][3] -1.3000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9280 _refine.correlation_coeff_Fo_to_Fc_free 0.9080 _refine.overall_SU_R_Cruickshank_DPI 0.1858 _refine.overall_SU_R_free 0.1765 _refine.pdbx_overall_ESU_R 0.1860 _refine.pdbx_overall_ESU_R_Free 0.1770 _refine.overall_SU_ML 0.1520 _refine.overall_SU_B 6.0410 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'pdb entry 3so8' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7444 _refine.B_iso_max 84.460 _refine.B_iso_min 5.400 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.400 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1455 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 79 _refine_hist.number_atoms_total 1568 _refine_hist.d_res_high 2.0300 _refine_hist.d_res_low 30.0000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1520 0.012 0.019 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 1432 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2073 1.382 1.971 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 3289 0.793 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 195 5.347 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 63 37.826 25.714 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 244 11.994 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 3 7.464 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 245 0.081 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1725 0.006 0.020 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 330 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 778 2.169 2.314 ? ? 'X-RAY DIFFRACTION' r_mcbond_other 776 2.151 2.307 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 970 3.196 3.450 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.0300 _refine_ls_shell.d_res_low 2.0820 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.number_reflns_R_work 1153 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2660 _refine_ls_shell.R_factor_R_free 0.3370 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 64 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1217 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4QQI _struct.title 'Crystal structure of ANKRA2-RFX7 complex' _struct.pdbx_descriptor 'Ankyrin repeat family A protein 2, DNA-binding protein RFX7' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4QQI _struct_keywords.text 'Structural Genomics Consortium, SGC, STRUCTURAL PROTEIN' _struct_keywords.pdbx_keywords 'STRUCTURAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 4 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 4 ? N N N 4 ? O N N 5 ? P N N 4 ? Q N N 4 ? R N N 4 ? S N N 6 ? T N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 20 ? ALA A 25 ? THR A 143 ALA A 148 1 ? 6 HELX_P HELX_P2 2 ASN A 26 ? LEU A 28 ? ASN A 149 LEU A 151 5 ? 3 HELX_P HELX_P3 3 SER A 29 ? GLY A 37 ? SER A 152 GLY A 160 1 ? 9 HELX_P HELX_P4 4 GLU A 38 ? GLU A 49 ? GLU A 161 GLU A 172 1 ? 12 HELX_P HELX_P5 5 THR A 61 ? HIS A 69 ? THR A 184 HIS A 192 1 ? 9 HELX_P HELX_P6 6 GLN A 71 ? ASN A 81 ? GLN A 194 ASN A 204 1 ? 11 HELX_P HELX_P7 7 SER A 94 ? GLY A 103 ? SER A 217 GLY A 226 1 ? 10 HELX_P HELX_P8 8 TYR A 104 ? CYS A 114 ? TYR A 227 CYS A 237 1 ? 11 HELX_P HELX_P9 9 THR A 127 ? GLY A 135 ? THR A 250 GLY A 258 1 ? 9 HELX_P HELX_P10 10 HIS A 137 ? SER A 147 ? HIS A 260 SER A 270 1 ? 11 HELX_P HELX_P11 11 ASN A 160 ? GLY A 169 ? ASN A 283 GLY A 292 1 ? 10 HELX_P HELX_P12 12 TYR A 170 ? LYS A 183 ? TYR A 293 LYS A 306 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 A 401' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 A 402' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A 403' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ASN A 136 ? ASN A 259 . ? 1_555 ? 2 AC1 5 GLY A 169 ? GLY A 292 . ? 1_555 ? 3 AC1 5 ARG A 171 ? ARG A 294 . ? 1_555 ? 4 AC1 5 SER A 172 ? SER A 295 . ? 1_555 ? 5 AC1 5 HOH S . ? HOH A 508 . ? 1_555 ? 6 AC2 5 ASN A 136 ? ASN A 259 . ? 1_555 ? 7 AC2 5 HIS A 137 ? HIS A 260 . ? 1_555 ? 8 AC2 5 VAL A 138 ? VAL A 261 . ? 1_555 ? 9 AC2 5 LYS A 139 ? LYS A 262 . ? 1_555 ? 10 AC2 5 HOH S . ? HOH A 565 . ? 1_555 ? 11 AC3 3 SER A 29 ? SER A 152 . ? 1_555 ? 12 AC3 3 VAL A 30 ? VAL A 153 . ? 1_555 ? 13 AC3 3 ARG A 45 ? ARG A 168 . ? 1_555 ? 14 AC4 3 ASP A 117 ? ASP A 240 . ? 1_555 ? 15 AC4 3 VAL A 118 ? VAL A 241 . ? 1_555 ? 16 AC4 3 ASN A 119 ? ASN A 242 . ? 1_555 ? # _atom_sites.entry_id 4QQI _atom_sites.fract_transf_matrix[1][1] 0.013252 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009773 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.030707 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S X # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 124 ? ? ? A . n A 1 2 HIS 2 125 ? ? ? A . n A 1 3 HIS 3 126 ? ? ? A . n A 1 4 HIS 4 127 ? ? ? A . n A 1 5 HIS 5 128 ? ? ? A . n A 1 6 HIS 6 129 ? ? ? A . n A 1 7 HIS 7 130 ? ? ? A . n A 1 8 SER 8 131 ? ? ? A . n A 1 9 SER 9 132 ? ? ? A . n A 1 10 GLY 10 133 ? ? ? A . n A 1 11 ARG 11 134 ? ? ? A . n A 1 12 GLU 12 135 ? ? ? A . n A 1 13 ASN 13 136 ? ? ? A . n A 1 14 LEU 14 137 137 LEU LEU A . n A 1 15 TYR 15 138 138 TYR TYR A . n A 1 16 PHE 16 139 139 PHE PHE A . n A 1 17 GLN 17 140 140 GLN GLN A . n A 1 18 GLY 18 141 141 GLY GLY A . n A 1 19 SER 19 142 142 SER SER A . n A 1 20 THR 20 143 143 THR THR A . n A 1 21 THR 21 144 144 THR THR A . n A 1 22 PRO 22 145 145 PRO PRO A . n A 1 23 LEU 23 146 146 LEU LEU A . n A 1 24 LEU 24 147 147 LEU LEU A . n A 1 25 ALA 25 148 148 ALA ALA A . n A 1 26 ASN 26 149 149 ASN ASN A . n A 1 27 SER 27 150 150 SER SER A . n A 1 28 LEU 28 151 151 LEU LEU A . n A 1 29 SER 29 152 152 SER SER A . n A 1 30 VAL 30 153 153 VAL VAL A . n A 1 31 HIS 31 154 154 HIS HIS A . n A 1 32 GLN 32 155 155 GLN GLN A . n A 1 33 LEU 33 156 156 LEU LEU A . n A 1 34 ALA 34 157 157 ALA ALA A . n A 1 35 ALA 35 158 158 ALA ALA A . n A 1 36 GLN 36 159 159 GLN GLN A . n A 1 37 GLY 37 160 160 GLY GLY A . n A 1 38 GLU 38 161 161 GLU GLU A . n A 1 39 MET 39 162 162 MET MET A . n A 1 40 LEU 40 163 163 LEU LEU A . n A 1 41 TYR 41 164 164 TYR TYR A . n A 1 42 LEU 42 165 165 LEU LEU A . n A 1 43 ALA 43 166 166 ALA ALA A . n A 1 44 THR 44 167 167 THR THR A . n A 1 45 ARG 45 168 168 ARG ARG A . n A 1 46 ILE 46 169 169 ILE ILE A . n A 1 47 GLU 47 170 170 GLU GLU A . n A 1 48 GLN 48 171 171 GLN GLN A . n A 1 49 GLU 49 172 172 GLU GLU A . n A 1 50 ASN 50 173 173 ASN ASN A . n A 1 51 VAL 51 174 174 VAL VAL A . n A 1 52 ILE 52 175 175 ILE ILE A . n A 1 53 ASN 53 176 176 ASN ASN A . n A 1 54 HIS 54 177 177 HIS HIS A . n A 1 55 THR 55 178 178 THR THR A . n A 1 56 ASP 56 179 179 ASP ASP A . n A 1 57 GLU 57 180 180 GLU GLU A . n A 1 58 GLU 58 181 181 GLU GLU A . n A 1 59 GLY 59 182 182 GLY GLY A . n A 1 60 PHE 60 183 183 PHE PHE A . n A 1 61 THR 61 184 184 THR THR A . n A 1 62 PRO 62 185 185 PRO PRO A . n A 1 63 LEU 63 186 186 LEU LEU A . n A 1 64 MET 64 187 187 MET MET A . n A 1 65 TRP 65 188 188 TRP TRP A . n A 1 66 ALA 66 189 189 ALA ALA A . n A 1 67 ALA 67 190 190 ALA ALA A . n A 1 68 ALA 68 191 191 ALA ALA A . n A 1 69 HIS 69 192 192 HIS HIS A . n A 1 70 GLY 70 193 193 GLY GLY A . n A 1 71 GLN 71 194 194 GLN GLN A . n A 1 72 ILE 72 195 195 ILE ILE A . n A 1 73 ALA 73 196 196 ALA ALA A . n A 1 74 VAL 74 197 197 VAL VAL A . n A 1 75 VAL 75 198 198 VAL VAL A . n A 1 76 GLU 76 199 199 GLU GLU A . n A 1 77 PHE 77 200 200 PHE PHE A . n A 1 78 LEU 78 201 201 LEU LEU A . n A 1 79 LEU 79 202 202 LEU LEU A . n A 1 80 GLN 80 203 203 GLN GLN A . n A 1 81 ASN 81 204 204 ASN ASN A . n A 1 82 GLY 82 205 205 GLY GLY A . n A 1 83 ALA 83 206 206 ALA ALA A . n A 1 84 ASP 84 207 207 ASP ASP A . n A 1 85 PRO 85 208 208 PRO PRO A . n A 1 86 GLN 86 209 209 GLN GLN A . n A 1 87 LEU 87 210 210 LEU LEU A . n A 1 88 LEU 88 211 211 LEU LEU A . n A 1 89 GLY 89 212 212 GLY GLY A . n A 1 90 LYS 90 213 213 LYS LYS A . n A 1 91 GLY 91 214 214 GLY GLY A . n A 1 92 ARG 92 215 215 ARG ARG A . n A 1 93 GLU 93 216 216 GLU GLU A . n A 1 94 SER 94 217 217 SER SER A . n A 1 95 ALA 95 218 218 ALA ALA A . n A 1 96 LEU 96 219 219 LEU LEU A . n A 1 97 SER 97 220 220 SER SER A . n A 1 98 LEU 98 221 221 LEU LEU A . n A 1 99 ALA 99 222 222 ALA ALA A . n A 1 100 CYS 100 223 223 CYS CYS A . n A 1 101 SER 101 224 224 SER SER A . n A 1 102 LYS 102 225 225 LYS LYS A . n A 1 103 GLY 103 226 226 GLY GLY A . n A 1 104 TYR 104 227 227 TYR TYR A . n A 1 105 THR 105 228 228 THR THR A . n A 1 106 ASP 106 229 229 ASP ASP A . n A 1 107 ILE 107 230 230 ILE ILE A . n A 1 108 VAL 108 231 231 VAL VAL A . n A 1 109 LYS 109 232 232 LYS LYS A . n A 1 110 MET 110 233 233 MET MET A . n A 1 111 LEU 111 234 234 LEU LEU A . n A 1 112 LEU 112 235 235 LEU LEU A . n A 1 113 ASP 113 236 236 ASP ASP A . n A 1 114 CYS 114 237 237 CYS CYS A . n A 1 115 GLY 115 238 238 GLY GLY A . n A 1 116 VAL 116 239 239 VAL VAL A . n A 1 117 ASP 117 240 240 ASP ASP A . n A 1 118 VAL 118 241 241 VAL VAL A . n A 1 119 ASN 119 242 242 ASN ASN A . n A 1 120 GLU 120 243 243 GLU GLU A . n A 1 121 TYR 121 244 244 TYR TYR A . n A 1 122 ASP 122 245 245 ASP ASP A . n A 1 123 TRP 123 246 246 TRP TRP A . n A 1 124 ASN 124 247 247 ASN ASN A . n A 1 125 GLY 125 248 248 GLY GLY A . n A 1 126 GLY 126 249 249 GLY GLY A . n A 1 127 THR 127 250 250 THR THR A . n A 1 128 PRO 128 251 251 PRO PRO A . n A 1 129 LEU 129 252 252 LEU LEU A . n A 1 130 LEU 130 253 253 LEU LEU A . n A 1 131 TYR 131 254 254 TYR TYR A . n A 1 132 ALA 132 255 255 ALA ALA A . n A 1 133 VAL 133 256 256 VAL VAL A . n A 1 134 HIS 134 257 257 HIS HIS A . n A 1 135 GLY 135 258 258 GLY GLY A . n A 1 136 ASN 136 259 259 ASN ASN A . n A 1 137 HIS 137 260 260 HIS HIS A . n A 1 138 VAL 138 261 261 VAL VAL A . n A 1 139 LYS 139 262 262 LYS LYS A . n A 1 140 CYS 140 263 263 CYS CYS A . n A 1 141 VAL 141 264 264 VAL VAL A . n A 1 142 LYS 142 265 265 LYS LYS A . n A 1 143 MET 143 266 266 MET MET A . n A 1 144 LEU 144 267 267 LEU LEU A . n A 1 145 LEU 145 268 268 LEU LEU A . n A 1 146 GLU 146 269 269 GLU GLU A . n A 1 147 SER 147 270 270 SER SER A . n A 1 148 GLY 148 271 271 GLY GLY A . n A 1 149 ALA 149 272 272 ALA ALA A . n A 1 150 ASP 150 273 273 ASP ASP A . n A 1 151 PRO 151 274 274 PRO PRO A . n A 1 152 THR 152 275 275 THR THR A . n A 1 153 ILE 153 276 276 ILE ILE A . n A 1 154 GLU 154 277 277 GLU GLU A . n A 1 155 THR 155 278 278 THR THR A . n A 1 156 ASP 156 279 279 ASP ASP A . n A 1 157 SER 157 280 280 SER SER A . n A 1 158 GLY 158 281 281 GLY GLY A . n A 1 159 TYR 159 282 282 TYR TYR A . n A 1 160 ASN 160 283 283 ASN ASN A . n A 1 161 SER 161 284 284 SER SER A . n A 1 162 MET 162 285 285 MET MET A . n A 1 163 ASP 163 286 286 ASP ASP A . n A 1 164 LEU 164 287 287 LEU LEU A . n A 1 165 ALA 165 288 288 ALA ALA A . n A 1 166 VAL 166 289 289 VAL VAL A . n A 1 167 ALA 167 290 290 ALA ALA A . n A 1 168 LEU 168 291 291 LEU LEU A . n A 1 169 GLY 169 292 292 GLY GLY A . n A 1 170 TYR 170 293 293 TYR TYR A . n A 1 171 ARG 171 294 294 ARG ARG A . n A 1 172 SER 172 295 295 SER SER A . n A 1 173 VAL 173 296 296 VAL VAL A . n A 1 174 GLN 174 297 297 GLN GLN A . n A 1 175 GLN 175 298 298 GLN GLN A . n A 1 176 VAL 176 299 299 VAL VAL A . n A 1 177 ILE 177 300 300 ILE ILE A . n A 1 178 GLU 178 301 301 GLU GLU A . n A 1 179 SER 179 302 302 SER SER A . n A 1 180 HIS 180 303 303 HIS HIS A . n A 1 181 LEU 181 304 304 LEU LEU A . n A 1 182 LEU 182 305 305 LEU LEU A . n A 1 183 LYS 183 306 306 LYS LYS A . n A 1 184 LEU 184 307 307 LEU LEU A . n A 1 185 LEU 185 308 308 LEU LEU A . n A 1 186 GLN 186 309 309 GLN GLN A . n A 1 187 ASN 187 310 310 ASN ASN A . n A 1 188 ILE 188 311 311 ILE ILE A . n A 1 189 LYS 189 312 312 LYS LYS A . n A 1 190 GLU 190 313 ? ? ? A . n B 2 1 LYS 1 85 ? ? ? X . n B 2 2 ALA 2 86 86 ALA ALA X . n B 2 3 PHE 3 87 87 PHE PHE X . n B 2 4 VAL 4 88 88 VAL VAL X . n B 2 5 HIS 5 89 89 HIS HIS X . n B 2 6 MET 6 90 90 MET MET X . n B 2 7 PRO 7 91 91 PRO PRO X . n B 2 8 THR 8 92 92 THR THR X . n B 2 9 LEU 9 93 93 LEU LEU X . n B 2 10 PRO 10 94 94 PRO PRO X . n B 2 11 ASN 11 95 95 ASN ASN X . n B 2 12 LEU 12 96 96 LEU LEU X . n B 2 13 ASP 13 97 97 ASP ASP X . n B 2 14 PHE 14 98 98 PHE PHE X . n B 2 15 HIS 15 99 99 HIS HIS X . n B 2 16 LYS 16 100 100 LYS LYS X . n B 2 17 THR 17 101 101 THR THR X . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SO4 1 401 1 SO4 SO4 A . D 3 SO4 1 402 2 SO4 SO4 A . E 3 SO4 1 403 3 SO4 SO4 A . F 3 SO4 1 404 4 SO4 SO4 A . G 4 UNX 1 405 10 UNX UNX A . H 4 UNX 1 406 11 UNX UNX A . I 4 UNX 1 407 4 UNX UNX A . J 4 UNX 1 408 5 UNX UNX A . K 4 UNX 1 409 7 UNX UNX A . L 4 UNX 1 410 8 UNX UNX A . M 4 UNX 1 411 9 UNX UNX A . N 4 UNX 1 412 12 UNX UNX A . O 5 UNL 1 413 1 UNL UNL A . P 4 UNX 1 201 2 UNX UNX X . Q 4 UNX 1 202 6 UNX UNX X . R 4 UNX 1 203 3 UNX UNX X . S 6 HOH 1 501 1 HOH HOH A . S 6 HOH 2 502 3 HOH HOH A . S 6 HOH 3 503 4 HOH HOH A . S 6 HOH 4 504 5 HOH HOH A . S 6 HOH 5 505 6 HOH HOH A . S 6 HOH 6 506 7 HOH HOH A . S 6 HOH 7 507 9 HOH HOH A . S 6 HOH 8 508 10 HOH HOH A . S 6 HOH 9 509 11 HOH HOH A . S 6 HOH 10 510 12 HOH HOH A . S 6 HOH 11 511 13 HOH HOH A . S 6 HOH 12 512 14 HOH HOH A . S 6 HOH 13 513 15 HOH HOH A . S 6 HOH 14 514 17 HOH HOH A . S 6 HOH 15 515 19 HOH HOH A . S 6 HOH 16 516 21 HOH HOH A . S 6 HOH 17 517 22 HOH HOH A . S 6 HOH 18 518 23 HOH HOH A . S 6 HOH 19 519 24 HOH HOH A . S 6 HOH 20 520 25 HOH HOH A . S 6 HOH 21 521 26 HOH HOH A . S 6 HOH 22 522 27 HOH HOH A . S 6 HOH 23 523 28 HOH HOH A . S 6 HOH 24 524 30 HOH HOH A . S 6 HOH 25 525 31 HOH HOH A . S 6 HOH 26 526 32 HOH HOH A . S 6 HOH 27 527 33 HOH HOH A . S 6 HOH 28 528 34 HOH HOH A . S 6 HOH 29 529 36 HOH HOH A . S 6 HOH 30 530 37 HOH HOH A . S 6 HOH 31 531 38 HOH HOH A . S 6 HOH 32 532 39 HOH HOH A . S 6 HOH 33 533 41 HOH HOH A . S 6 HOH 34 534 42 HOH HOH A . S 6 HOH 35 535 43 HOH HOH A . S 6 HOH 36 536 44 HOH HOH A . S 6 HOH 37 537 45 HOH HOH A . S 6 HOH 38 538 46 HOH HOH A . S 6 HOH 39 539 47 HOH HOH A . S 6 HOH 40 540 48 HOH HOH A . S 6 HOH 41 541 49 HOH HOH A . S 6 HOH 42 542 52 HOH HOH A . S 6 HOH 43 543 53 HOH HOH A . S 6 HOH 44 544 55 HOH HOH A . S 6 HOH 45 545 56 HOH HOH A . S 6 HOH 46 546 57 HOH HOH A . S 6 HOH 47 547 58 HOH HOH A . S 6 HOH 48 548 60 HOH HOH A . S 6 HOH 49 549 61 HOH HOH A . S 6 HOH 50 550 64 HOH HOH A . S 6 HOH 51 551 66 HOH HOH A . S 6 HOH 52 552 67 HOH HOH A . S 6 HOH 53 553 68 HOH HOH A . S 6 HOH 54 554 69 HOH HOH A . S 6 HOH 55 555 70 HOH HOH A . S 6 HOH 56 556 71 HOH HOH A . S 6 HOH 57 557 72 HOH HOH A . S 6 HOH 58 558 73 HOH HOH A . S 6 HOH 59 559 74 HOH HOH A . S 6 HOH 60 560 75 HOH HOH A . S 6 HOH 61 561 76 HOH HOH A . S 6 HOH 62 562 77 HOH HOH A . S 6 HOH 63 563 80 HOH HOH A . S 6 HOH 64 564 81 HOH HOH A . S 6 HOH 65 565 82 HOH HOH A . S 6 HOH 66 566 83 HOH HOH A . S 6 HOH 67 567 84 HOH HOH A . S 6 HOH 68 568 86 HOH HOH A . S 6 HOH 69 569 87 HOH HOH A . S 6 HOH 70 570 88 HOH HOH A . S 6 HOH 71 571 89 HOH HOH A . S 6 HOH 72 572 90 HOH HOH A . S 6 HOH 73 573 91 HOH HOH A . S 6 HOH 74 574 92 HOH HOH A . S 6 HOH 75 575 93 HOH HOH A . S 6 HOH 76 576 94 HOH HOH A . S 6 HOH 77 577 95 HOH HOH A . T 6 HOH 1 301 29 HOH HOH X . T 6 HOH 2 302 62 HOH HOH X . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2670 ? 1 MORE -72 ? 1 'SSA (A^2)' 10720 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-03 2 'Structure model' 1 1 2015-03-18 3 'Structure model' 1 2 2015-04-29 4 'Structure model' 1 3 2019-12-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' citation_author 3 4 'Structure model' diffrn_source 4 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.country' 2 4 'Structure model' '_citation.journal_abbrev' 3 4 'Structure model' '_citation.journal_id_ASTM' 4 4 'Structure model' '_citation.journal_id_CSD' 5 4 'Structure model' '_citation.journal_id_ISSN' 6 4 'Structure model' '_citation.journal_volume' 7 4 'Structure model' '_citation.page_first' 8 4 'Structure model' '_citation.page_last' 9 4 'Structure model' '_citation.pdbx_database_id_DOI' 10 4 'Structure model' '_citation.pdbx_database_id_PubMed' 11 4 'Structure model' '_citation.title' 12 4 'Structure model' '_citation.year' 13 4 'Structure model' '_diffrn_source.type' 14 4 'Structure model' '_struct_ref_seq_dif.details' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 Aimless 0.3.6 21/05/14 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.14 'Dec. 10, 2013' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LEU 137 ? CG ? A LEU 14 CG 2 1 Y 1 A LEU 137 ? CD1 ? A LEU 14 CD1 3 1 Y 1 A LEU 137 ? CD2 ? A LEU 14 CD2 4 1 Y 1 A GLU 180 ? CD ? A GLU 57 CD 5 1 Y 1 A GLU 180 ? OE1 ? A GLU 57 OE1 6 1 Y 1 A GLU 180 ? OE2 ? A GLU 57 OE2 7 1 Y 1 A GLU 181 ? CD ? A GLU 58 CD 8 1 Y 1 A GLU 181 ? OE1 ? A GLU 58 OE1 9 1 Y 1 A GLU 181 ? OE2 ? A GLU 58 OE2 10 1 Y 1 A LYS 262 ? CD ? A LYS 139 CD 11 1 Y 1 A LYS 262 ? CE ? A LYS 139 CE 12 1 Y 1 A LYS 262 ? NZ ? A LYS 139 NZ 13 1 Y 1 A LYS 312 ? CD ? A LYS 189 CD 14 1 Y 1 A LYS 312 ? CE ? A LYS 189 CE 15 1 Y 1 A LYS 312 ? NZ ? A LYS 189 NZ 16 1 Y 1 X PHE 87 ? CD1 ? B PHE 3 CD1 17 1 Y 1 X PHE 87 ? CD2 ? B PHE 3 CD2 18 1 Y 1 X PHE 87 ? CE1 ? B PHE 3 CE1 19 1 Y 1 X PHE 87 ? CE2 ? B PHE 3 CE2 20 1 Y 1 X PHE 87 ? CZ ? B PHE 3 CZ 21 1 Y 1 X THR 101 ? OG1 ? B THR 17 OG1 22 1 Y 1 X THR 101 ? CG2 ? B THR 17 CG2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 124 ? A MET 1 2 1 Y 1 A HIS 125 ? A HIS 2 3 1 Y 1 A HIS 126 ? A HIS 3 4 1 Y 1 A HIS 127 ? A HIS 4 5 1 Y 1 A HIS 128 ? A HIS 5 6 1 Y 1 A HIS 129 ? A HIS 6 7 1 Y 1 A HIS 130 ? A HIS 7 8 1 Y 1 A SER 131 ? A SER 8 9 1 Y 1 A SER 132 ? A SER 9 10 1 Y 1 A GLY 133 ? A GLY 10 11 1 Y 1 A ARG 134 ? A ARG 11 12 1 Y 1 A GLU 135 ? A GLU 12 13 1 Y 1 A ASN 136 ? A ASN 13 14 1 Y 1 A GLU 313 ? A GLU 190 15 1 Y 1 X LYS 85 ? B LYS 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SULFATE ION' SO4 4 'UNKNOWN ATOM OR ION' UNX 5 'UNKNOWN LIGAND' UNL 6 water HOH #